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def _mark_html_fields_as_safe(self, page): """ Mark the html content as safe so we don't have to use the safe template tag in all cms templates: """ page.title = mark_safe(page.title) page.content = mark_safe(page.content) return page
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def _consolidate_slices(slices): """Consolidate adjacent slices in a list of slices. """ result = [] last_slice = slice(None) for slice_ in slices: if not isinstance(slice_, slice): raise ValueError('list element is not a slice: %r' % slice_) if (result and last_slice.sto...
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def fixUTF8(cls, data): # Ensure proper encoding for UA's servers... """ Convert all strings to UTF-8 """ for key in data: if isinstance(data[key], str): data[key] = data[key].encode('utf-8') return data
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def _spin(coordinates, theta, around): """Rotate a set of coordinates in place around an arbitrary vector. Parameters ---------- coordinates : np.ndarray, shape=(n,3), dtype=float The coordinates being spun. theta : float The angle by which to spin the coordinates, in radians. a...
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def handle_xmlrpc(self, request_text): """Handle a single XML-RPC request""" response = self._marshaled_dispatch(request_text) print('Content-Type: text/xml') print('Content-Length: %d' % len(response)) print() sys.stdout.flush() sys.stdout.buffer.write(response...
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async def document( self, file, title=None, *, description=None, type=None, mime_type=None, attributes=None, force_document=False, voice_note=False, video_note=False, use_cache=True, id=None, text=None, parse_mode=(), link_preview=True, geo=None, period=60, co...
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def _init_browser(self): """ Ovveride this method with the appropriate way to prepare a logged in browser. """ self.browser = mechanize.Browser() self.browser.set_handle_robots(False) self.browser.open(self.server_url + "/youraccount/login") self.browser.s...
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def enforce_timezone(self, value): """ When `self.default_timezone` is `None`, always return naive datetimes. When `self.default_timezone` is not `None`, always return aware datetimes. """ field_timezone = getattr(self, 'timezone', self.default_timezone()) if (field_time...
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def union(self, *others: 'Substitution') -> 'Substitution': """Try to merge the substitutions. If a variable occurs in multiple substitutions, try to merge the replacements. See :meth:`union_with_variable` to see how replacements are merged. Does not modify any of the original substitu...
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def create(buffer_capacity: int, buffer_initial_size: int, frame_stack_compensation: bool = False, frame_history: int = 1): """ Vel factory function """ return CircularReplayBufferFactory( buffer_capacity=buffer_capacity, buffer_initial_size=buffer_initial_size, frame_stack_co...
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def cast(self, val: str): """converts string to type requested by `cast_as`""" try: return getattr(self, 'cast_as_{}'.format( self.cast_as.__name__.lower()))(val) except AttributeError: return self.cast_as(val)
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def landweber(op, x, rhs, niter, omega=None, projection=None, callback=None): r"""Optimized implementation of Landweber's method. Solves the inverse problem:: A(x) = rhs Parameters ---------- op : `Operator` Operator in the inverse problem. ``op.derivative(x).adjoint`` must be ...
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def create_template( self, name, subject, html, text='', timeout=None ): """ API call to create a template """ payload = { 'name': name, 'subject': subject, 'html': html, 'text': text } r...
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def check(self, src_tgt, actual_deps): """Check for missing deps. See docstring for _compute_missing_deps for details. """ if self._check_missing_direct_deps or self._check_unnecessary_deps: missing_file_deps, missing_direct_tgt_deps = \ self._compute_missing_deps(src_tgt, actual_deps) ...
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def add_request_handlers_object(self, rh_obj): """Add fake request handlers from an object with request_* method(s) See :meth:`FakeInspectingClientManager.add_request_handlers_dict` for more detail. """ rh_dict = {} for name in dir(rh_obj): if not callable(getattr(r...
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def create(cls, pid_type=None, pid_value=None, object_type=None, object_uuid=None, status=None, **kwargs): """Create a new instance for the given type and pid. :param pid_type: Persistent identifier type. (Default: None). :param pid_value: Persistent identifier value. (Default: N...
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def connect(url): """Connect to UNIX or TCP socket. url can be either tcp://<host>:port or ipc://<path> """ url = urlparse(url) if url.scheme == 'tcp': sock = socket() netloc = tuple(url.netloc.rsplit(':', 1)) hostname = socket.gethostname() elif url.scheme == 'ipc':...
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def download(url, file=None): """ Pass file as a filename, open file object, or None to return the request bytes Args: url (str): URL of file to download file (Union[str, io, None]): One of the following: - Filename of output file - File opened in binary write mode...
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def get_resources(self, ids, cache=True): """Support server side filtering on arns or names """ if ids[0].startswith('arn:'): params = {'LoadBalancerArns': ids} else: params = {'Names': ids} return self.query.filter(self.manager, **params)
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def is_panel_visible_for_user(panel, user): """ Checks if the user is allowed to see the panel :param panel: panel ID as string :param user: a MemberData object :return: Boolean """ roles = user.getRoles() visibility = get_dashboard_panels_visibility_by_section(panel) for pair in vis...
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def content_type(self, request=None, response=None): """Returns the content type that should be used by default for this endpoint""" if callable(self.outputs.content_type): return self.outputs.content_type(request=request, response=response) else: return self.outputs.cont...
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def _brownian_eigs(n_grid, lag_time, grad_potential, xmin, xmax, reflect_bc): """Analytic eigenvalues/eigenvectors for 1D Brownian dynamics """ transmat = _brownian_transmat(n_grid, lag_time, grad_potential, xmin, xmax, reflect_bc) u, lv, rv = _solve_msm_eigensystem(transmat, k=len(transmat) - 1) re...
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def _wait_for_exec_ready(self): """ Wait for response. :return: CliResponse object coming in :raises: TestStepTimeout, TestStepError """ while not self.response_received.wait(1) and self.query_timeout != 0: if self.query_timeout != 0 and self.query_timeout < ...
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def replace_first_key_in_makefile(buf, key, replacement, outfile=None): ''' Replaces first line in 'buf' matching 'key' with 'replacement'. Optionally, writes out this new buffer into 'outfile'. Returns: Buffer after replacement has been done ''' regexp = re.compile(r''' \n\s* # ...
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def _init_repo(self): """ create and initialize a new Git Repo """ log.debug("initializing new Git Repo: {0}".format(self._engine_path)) if os.path.exists(self._engine_path): log.error("Path already exists! Aborting!") raise RuntimeError else: # create...
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def __wait_for_one_server_connection(self): """Wait until at least one server is connected. Since quitting relies on a bunch of loops terminating, attempting to quit [cleanly] immediately will still have to wait for the connections to finish starting. """ _logger.info...
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def add_triple(self, sub, pred=None, obj=None, **kwargs): """ Adds a triple to the dataset args: sub: The subject of the triple or dictionary contaning a triple pred: Optional if supplied in sub, predicate of the triple obj: Opt...
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def msvc_output_flag(target, source, env, for_signature): """ Returns the correct /Fo flag for batching. If batching is disabled or there's only one source file, then we return an /Fo string that specifies the target explicitly. Otherwise, we return an /Fo string that just specifies the first targ...
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def _output_from_file(self, entry='git_describe'): """ Read the version from a .version file that may exist alongside __init__.py. This file can be generated by piping the following output to file: git describe --long --match v*.* """ try: vfile = os.path.jo...
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def octocat(self, say=None): """Returns an easter egg of the API. :params str say: (optional), pass in what you'd like Octocat to say :returns: ascii art of Octocat """ url = self._build_url('octocat') req = self._get(url, params={'s': say}) return req.content if...
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def shutdown(self, msg): """Shutdown the scheduler.""" try: self.cleanup() self.history.append("Completed on: %s" % time.asctime()) self.history.append("Elapsed time: %s" % self.get_delta_etime()) if self.debug: print(">>>>> shutdown: Num...
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def get_annotation(db_path, db_list): """ Checks if database is set as annotated. """ annotated = False for db in db_list: if db["path"] == db_path: annotated = db["annotated"] break return annotated
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def has(self, name): """ Returns True if there is atleast one annotation by a given name, otherwise False. """ for a in self.all_annotations: if a.name == name: return True return False
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def _get_distance_term(self, C, mag, rrup): """ Returns the distance scaling term """ return (C['C4'] + C['C5'] * (mag - 6.3)) *\ np.log(np.sqrt(rrup ** 2. + np.exp(C['H']) ** 2.))
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def random_rescale_to_mahalanobis(self, x): """change `x` like for injection, all on genotypic level""" x -= self.mean if any(x): x *= sum(self.randn(len(x))**2)**0.5 / self.mahalanobis_norm(x) x += self.mean return x
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def scatter(self, x, y, xerr=None, yerr=None, cov=None, corr=None, s_expr=None, c_expr=None, labels=None, selection=None, length_limit=50000, length_check=True, label=None, xlabel=None, ylabel=None, errorbar_kwargs={}, ellipse_kwargs={}, **kwargs): """Viz (small amounts) of data in 2d using a scatter plot ...
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def _intertext_score(full_text): '''returns tuple of scored sentences in order of appearance Note: Doing an A/B test to compare results, reverting to original algorithm.''' sentences = sentence_tokenizer(full_text) norm = _normalize(sentences) similarity_matrix = pairwise_k...
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def count_lines_of_code(self, fname=''): """ counts non blank lines """ if fname == '': fname = self.fullname loc = 0 try: with open(fname) as f: for l in f: if l.strip() != '': loc += 1 r...
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def search_track(self, artist, album=None, track=None, full_album_art_uri=False): """Search for an artist, an artist's albums, or specific track. Args: artist (str): an artist's name. album (str, optional): an album name. Default `None`. track (s...
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def register_module(self, module, namespace=None): """ Register a module. :param module: must be a string or a module object to register. :type module: str :param namespace: Namespace tag. If it is None module will be used as namespace tag :type namespace: str ""...
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def insert_ising_model(cur, nodelist, edgelist, linear, quadratic, offset, encoded_data=None): """Insert an Ising model into the cache. Args: cur (:class:`sqlite3.Cursor`): An sqlite3 cursor. This function is meant to be run within a :obj:`with` statement. nodelist (list): The nodes...
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def simulate(self, T): """Simulate state and observation processes. Parameters ---------- T: int processes are simulated from time 0 to time T-1 Returns ------- x, y: lists lists of length T """ x = [] for t in ra...
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def compute_canonical_key_ids(self, search_amplifier=100): """ A canonical key id is the lowest integer key id that maps to a particular shard. The mapping to canonical key ids depends on the number of shards. Returns a dictionary mapping from shard number to canonical key id. ...
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def roulette_selection(population, fitnesses): """Create a list of parents with roulette selection.""" probabilities = _fitnesses_to_probabilities(fitnesses) intermediate_population = [] for _ in range(len(population)): # Choose a random individual selection = random.uniform(0.0, 1.0) ...
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def assert_headers(context): """ :type context: behave.runner.Context """ expected_headers = [(k, v) for k, v in row_table(context).items()] request = httpretty.last_request() actual_headers = request.headers.items() for expected_header in expected_headers: assert_in(expected_hea...
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def extractDate(text): """ Tries to extract a date from a given :obj:`str`. :param str text: Input date. A :obj:`datetime.date` object is passed thought without modification. :rtype: :obj:`datetime.date`""" if type(text) is datetime.date: return text match = date_format...
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def get_default_config(self): """ Returns the default collector settings """ config = super(OpenstackSwiftReconCollector, self).get_default_config() config.update({ 'path': 'swiftrecon', 'recon_account_cache': '/var/cache/swift/account.recon', ...
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def entitlements(self, request, pk=None): # pylint: disable=invalid-name,unused-argument """ Retrieve the list of entitlements available to this learner. Only those entitlements are returned that satisfy enterprise customer's data sharing setting. Arguments: request (HttpR...
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def exptime(self): ''' exptime: 下一個日期時間 :returns: 下一個預設時間 ''' return self.nextday + timedelta(hours=self.__hour - 8, minutes=self.__minutes)
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def handle(cls, value, **kwargs): """Split the supplied string on the given delimiter, providing a list. Format of value: <delimiter>::<value> For example: Subnets: ${split ,::subnet-1,subnet-2,subnet-3} Would result in the variable `Subnets` getting a list c...
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def get_access_token(self, code=None, **params): """ Return the memoized access token or go out and fetch one. """ if self._access_token is None: if code is None: raise ValueError(_('Invalid code.')) self.access_token_dict = self._get_...
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def hicpro_stats_table(self): """ Add HiC-Pro stats to the general stats table """ headers = OrderedDict() headers['percent_duplicates'] = { 'title': '% Duplicates', 'description': 'Percent of duplicated valid pairs (%)', 'max': 100, 'min':...
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def interact_GxE_1dof(snps,pheno,env,K=None,covs=None, test='lrt'): """ Univariate GxE fixed effects interaction linear mixed model test for all pairs of SNPs and environmental variables. Args: snps: [N x S] SP.array of S SNPs for N individuals pheno: [N x 1] SP.array of 1 phenotype ...
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def create_from_header(header): """ Creates a File from an existing header, allocating the array of point according to the provided header. The input header is copied. Parameters ---------- header : existing header to be used to create the file Returns ------- pylas.lasdatas.base....
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def _parse_message(self, data): """ Parse the bytes received from the socket. :param data: the bytes received from the socket :return: """ if TwitchChatStream._check_has_ping(data): self._send_pong() if TwitchChatStream._check_has_channel(data): ...
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def install(self, module): """Install a module into this binder. In this context the module is one of the following: * function taking the :class:`Binder` as it's only parameter :: def configure(binder): bind(str, to='s') binder.install(conf...
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def max_entries(self, entries): """ Chance the maximum number of retained log entries :param entries: The maximum number of log entries to retain at any given time :type entries: int """ self._debug_log.info('Changing maximum log entries from {old} to {new}' ...
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def _q_to_dcm(self, q): """ Create DCM (Matrix3) from q :param q: array q which represents a quaternion [w, x, y, z] :returns: Matrix3 """ assert(len(q) == 4) arr = super(Quaternion, self)._q_to_dcm(q) return self._dcm_array_to_matrix3(arr)
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def pretty_str(something, indent=0): """Return a human-readable string representation of an object. Uses `pretty_str` if the given value is an instance of `CodeEntity` and `repr` otherwise. Args: something: Some value to convert. Kwargs: indent (int): The amount of spaces ...
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def _convert_to_image_color(self, color): """:return: a color that can be used by the image""" rgb = self._convert_color_to_rrggbb(color) return self._convert_rrggbb_to_image_color(rgb)
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def merge_code(left_code, right_code): """ { relative_line: ((left_abs_line, ((offset, op, args), ...)), (right_abs_line, ((offset, op, args), ...))), ... } """ data = dict() code_lines = (left_code and left_code.iter_code_by_lines()) or tuple() for abs_line, rel_line, dis i...
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def rollback_group(self, group_id, version, force=False): """Roll a group back to a previous version. :param str group_id: group ID :param str version: group version :param bool force: apply even if a deployment is in progress :returns: a dict containing the deployment id and v...
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def extract(self, *args): """ Extract a specific variable """ self.time = np.loadtxt(self.abspath, skiprows=self._attributes['data_idx']+1, unpack=True, usecols=(0,)) for variable_idx in args: data ...
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def _get_split_tasks(args, split_fn, file_key, outfile_i=-1): """Split up input files and arguments, returning arguments for parallel processing. outfile_i specifies the location of the output file in the arguments to the processing function. Defaults to the last item in the list. """ split_args = ...
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def find_external_compartment(model): """Find the external compartment in the model. Uses a simple heuristic where the external compartment should be the one with the most exchange reactions. Arguments --------- model : cobra.Model A cobra model. Returns ------- str ...
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def per_section(it, is_delimiter=lambda x: x.isspace()): """ From http://stackoverflow.com/a/25226944/610569 """ ret = [] for line in it: if is_delimiter(line): if ret: yield ret # OR ''.join(ret) ret = [] else: ret.append(lin...
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def resolve_input_references(to_resolve, inputs_to_reference): """ Resolves input references given in the string to_resolve by using the inputs_to_reference. See http://www.commonwl.org/user_guide/06-params/index.html for more information. Example: "$(inputs.my_file.nameroot).md" -> "filename.md" ...
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def _remove_broken_links(): ''' Remove broken links in `<conda prefix>/etc/microdrop/plugins/enabled/`. Returns ------- list List of links removed (if any). ''' enabled_dir = MICRODROP_CONDA_PLUGINS.joinpath('enabled') if not enabled_dir.isdir(): return [] broken_li...
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def channel_close( self, registry_address: PaymentNetworkID, token_address: TokenAddress, partner_address: Address, retry_timeout: NetworkTimeout = DEFAULT_RETRY_TIMEOUT, ): """Close a channel opened with `partner_address` for the given `to...
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def get_info(node_id, info_id): """Get a specific info. Both the node and info id must be specified in the url. """ exp = experiment(session) # check the node exists node = models.Node.query.get(node_id) if node is None: return error_response(error_type="/info, node does not exist"...
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def _pd_post_process(self, cfg): """ Take care of those loop headers/tails where we manually broke their connection to the next BBL """ loop_back_edges = self._cfg.get_loop_back_edges() for b1, b2 in loop_back_edges: # The edge between b1 and b2 is manually b...
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def _submit_resource_request(self): """ **Purpose**: Create and submits a RADICAL Pilot Job as per the user provided resource description """ try: self._prof.prof('creating rreq', uid=self._uid) def _pilot_state_cb(pilot, state): ...
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def getEncodableAttributes(self, obj, codec=None): """ Must return a C{dict} of attributes to be encoded, even if its empty. @param codec: An optional argument that will contain the encoder instance calling this function. @since: 0.5 """ if not self._compiled...
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def _equals(self, b): '''Checks whether two records are equal by comparing all fields. :param b: Another _AzureRecord object :type b: _AzureRecord :type return: bool ''' def parse_dict(params): vals = [] for char in params: ...
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def get_schema_object(self, fully_qualified_name: str) -> 'BaseSchema': """ Used to generate a schema object from the given fully_qualified_name. :param fully_qualified_name: The fully qualified name of the object needed. :return: An initialized schema object """ if full...
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def sparse_covariance_matrix(self,x,y,names): """build a pyemu.Cov instance from GeoStruct Parameters ---------- x : (iterable of floats) x-coordinate locations y : (iterable of floats) y-coordinate location...
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def project_dir(self) -> str: """Generate a random path to project directory. :return: Path to project. :Example: /home/sherika/Development/Falcon/mercenary """ dev_dir = self.dev_dir() project = self.random.choice(PROJECT_NAMES) return str(self._pat...
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def VerifyServerPEM(self, http_object): """Check the server PEM for validity. This is used to determine connectivity to the server. Sometimes captive portals return a valid HTTP status, but the data is corrupted. Args: http_object: The response received from the server. Returns: True ...
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def key_value_convert(dictin, keyfn=lambda x: x, valuefn=lambda x: x, dropfailedkeys=False, dropfailedvalues=False, exception=ValueError): # type: (DictUpperBound, Callable[[Any], Any], Callable[[Any], Any], bool, bool, ExceptionUpperBound) -> Dict """Convert keys and/or values of dictiona...
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def _run_nb_cmd(self, cmd): ''' cmd iterator ''' try: proc = salt.utils.nb_popen.NonBlockingPopen( cmd, shell=True, stderr=subprocess.PIPE, stdout=subprocess.PIPE, ) while True: ...
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def fragment(self, message): """Fragment message based on max payload size note: if the message doesn't need to fragment, it will return a list which only contains original message itself. :param message: raw message :return: list of messages whose sizes <= max ...
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def _get_activation(self, F, inputs, activation, **kwargs): """Get activation function. Convert if is string""" func = {'tanh': F.tanh, 'relu': F.relu, 'sigmoid': F.sigmoid, 'softsign': F.softsign}.get(activation) if func: return func(i...
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def common_values_dict(): """Build a basic values object used in every create method. All our resources contain a same subset of value. Instead of redoing this code everytime, this method ensures it is done only at one place. """ now = datetime.datetime.utcnow().isoformat() etag = ...
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def submit(self, map, method, postfix): '''Realiza um requisição HTTP para a networkAPI. :param map: Dicionário com os dados para gerar o XML enviado no corpo da requisição HTTP. :param method: Método da requisição HTTP ('GET', 'POST', 'PUT' ou 'DELETE'). :param postfix: Posfixo a ser c...
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def update_policy(self): """ Uses demonstration_buffer to update the policy. """ self.trainer_metrics.start_policy_update_timer( number_experiences=len(self.training_buffer.update_buffer['actions']), mean_return=float(np.mean(self.cumulative_returns_since_policy_u...
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def take_screen_shot_to_array(self, screen_id, width, height, bitmap_format): """Takes a guest screen shot of the requested size and format and returns it as an array of bytes. in screen_id of type int The guest monitor to take screenshot from. in width of type int ...
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def send_keysequence_window_up(self, window, keysequence, delay=12000): """Send key release (up) events for the given key sequence""" _libxdo.xdo_send_keysequence_window_up( self._xdo, window, keysequence, ctypes.c_ulong(delay))
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def merged(): # type: () -> None """ Cleanup a remotely merged branch. """ develop = conf.get('git.devel_branch', 'develop') master = conf.get('git.master_branch', 'master') branch = git.current_branch(refresh=True) common.assert_branch_type('hotfix') # Pull master with the merged hotfix ...
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def write_float(self, value, little_endian=True): """ Pack the value as a float and write 4 bytes to the stream. Args: value (number): the value to write to the stream. little_endian (bool): specify the endianness. (Default) Little endian. Returns: i...
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def get_capacity_grav(self, min_voltage=None, max_voltage=None, use_overall_normalization=True): """ Get the gravimetric capacity of the electrode. Args: min_voltage (float): The minimum allowable voltage for a given step. max_vo...
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def concat(ctx, *strings): ''' Yields one string, concatenation of argument strings ''' strings = flatten([ (s.compute(ctx) if callable(s) else s) for s in strings ]) strings = (next(string_arg(ctx, s), '') for s in strings) #assert(all(map(lambda x: isinstance(x, str), strings))) #FIXME: Ch...
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def get_auth_providers(self, netloc): """BIG-IQ specific query for auth providers BIG-IP doesn't really need this because BIG-IP's multiple auth providers seem to handle fallthrough just fine. BIG-IQ on the other hand, needs to have its auth provider specified if you're using one of the...
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def locked_get(self): """Retrieve the credentials from the dictionary, if they exist. Returns: A :class:`oauth2client.client.OAuth2Credentials` instance. """ serialized = self._dictionary.get(self._key) if serialized is None: return None credentials = clien...
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def parse_option(self, option, block_name, *values): """ Parse domain values for option. """ _extra_subs = ('www', 'm', 'mobile') if len(values) == 0: # expect some values here.. raise ValueError for value in values: value = value.lower() ...
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def headers_to_sign(self, http_request): """ Select the headers from the request that need to be included in the StringToSign. """ headers_to_sign = {} headers_to_sign = {'Host' : self.host} for name, value in http_request.headers.items(): lname = name...
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def send(self, data): """ Sends a packet of data through this connection mode. This method returns a coroutine. """ if not self._connected: raise ConnectionError('Not connected') return self._send_queue.put(data)
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def errorhandler(self, code_or_exception): """ Register a function to handle errors by code or exception class. A decorator that is used to register a function given an error code. Example:: @app.errorhandler(404) def page_not_found(error): retu...
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def get_version(): """Get version from git and VERSION file. In the case where the version is not tagged in git, this function appends .post0+commit if the version has been released and .dev0+commit if the version has not yet been released. Derived from: https://github.com/Changaco/version.py ...
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def _debug_dump_dom(el): """Debugging helper. Prints out `el` contents.""" import xml.dom.minidom s = [el.nodeName] att_container = el.attributes for i in range(att_container.length): attr = att_container.item(i) s.append(' @{a}="{v}"'.format(a=attr.name, v=attr.value)) for c in...
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def to_string(input_): """Format an input for representation as text This method is just a convenience that handles default LaTeX formatting """ usetex = rcParams['text.usetex'] if isinstance(input_, units.UnitBase): return input_.to_string('latex_inline') if isinstance(input_, (float, ...
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