kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def print_warning_results(results, level=0): """Print warning messages found during validation. """ marker = _YELLOW + "[!] " for warning in results.warnings: print_level(logger.warning, marker + "Warning: %s", level, warning)	[ "def", "print_warning_results", "(", "results", ",", "level", "=", "0", ")", ":", "marker", "=", "_YELLOW", "+", "\"[!] \"", "for", "warning", "in", "results", ".", "warnings", ":", "print_level", "(", "logger", ".", "warning", ",", "marker", "+", "\"Warni...	35	13.428571
def resolve_domains(domains, disable_zone=False): """ Resolves the list of domains and returns the ips. """ dnsresolver = dns.resolver.Resolver() ips = [] for domain in domains: print_notification("Resolving {}".format(domain)) try: result = dnsresolver.query(do...	[ "def", "resolve_domains", "(", "domains", ",", "disable_zone", "=", "False", ")", ":", "dnsresolver", "=", "dns", ".", "resolver", ".", "Resolver", "(", ")", "ips", "=", "[", "]", "for", "domain", "in", "domains", ":", "print_notification", "(", "\"Resolvi...	30.473684	15
def validate(self, model, checks=[]): """Use a defined schema to validate the medium table format.""" custom = [ check_partial(reaction_id_check, frozenset(r.id for r in model.reactions)) ] super(Medium, self).validate(model=model, checks=checks + cu...	[ "def", "validate", "(", "self", ",", "model", ",", "checks", "=", "[", "]", ")", ":", "custom", "=", "[", "check_partial", "(", "reaction_id_check", ",", "frozenset", "(", "r", ".", "id", "for", "r", "in", "model", ".", "reactions", ")", ")", "]", ...	45.571429	17.142857
def _set_address(self, v, load=False): """ Setter method for address, mapped from YANG variable /interface/management/ip/address (container) If this variable is read-only (config: false) in the source YANG file, then _set_address is considered as a private method. Backends looking to populate this v...	[ "def", "_set_address", "(", "self", ",", "v", ",", "load", "=", "False", ")", ":", "if", "hasattr", "(", "v", ",", "\"_utype\"", ")", ":", "v", "=", "v", ".", "_utype", "(", "v", ")", "try", ":", "t", "=", "YANGDynClass", "(", "v", ",", "base",...	69.36	34
def construct_request_uri(local_dir, base_path, **kwargs): """ Constructs a special redirect_uri to be used when communicating with one OP. Each OP should get their own redirect_uris. :param local_dir: Local directory in which to place the file :param base_path: Base URL to start with :para...	[ "def", "construct_request_uri", "(", "local_dir", ",", "base_path", ",", "", "", "kwargs", ")", ":", "_filedir", "=", "local_dir", "if", "not", "os", ".", "path", ".", "isdir", "(", "_filedir", ")", ":", "os", ".", "makedirs", "(", "_filedir", ")", "...	35.142857	12
def rmarkdown_draft(filename, template, package): """ create a draft rmarkdown file from an installed template """ if file_exists(filename): return filename draft_template = Template( 'rmarkdown::draft("$filename", template="$template", package="$package", edit=FALSE)' ) draf...	[ "def", "rmarkdown_draft", "(", "filename", ",", "template", ",", "package", ")", ":", "if", "file_exists", "(", "filename", ")", ":", "return", "filename", "draft_template", "=", "Template", "(", "'rmarkdown::draft(\"$filename\", template=\"$template\", package=\"$package...	43.470588	21.823529
def add_catalogue(self, catalogue, overlay=False): ''' :param catalogue: Earthquake catalogue as instance of :class:`openquake.hmtk.seismicity.catalogue.Catalogue` :param dict config: Configuration parameters of the algorithm, containing the follo...	[ "def", "add_catalogue", "(", "self", ",", "catalogue", ",", "overlay", "=", "False", ")", ":", "# Magnitudes bins and minimum marrker size", "# min_mag = np.min(catalogue.data['magnitude'])", "# max_mag = np.max(catalogue.data['magnitude'])", "con_min", "=", "np", ".", "where",...	46	21.220339
def pull_request(self, number): """Get the pull request indicated by ``number``. :param int number: (required), number of the pull request. :returns: :class:`PullRequest <github3.pulls.PullRequest>` """ json = None if int(number) > 0: url = self._build_url('p...	[ "def", "pull_request", "(", "self", ",", "number", ")", ":", "json", "=", "None", "if", "int", "(", "number", ")", ">", "0", ":", "url", "=", "self", ".", "_build_url", "(", "'pulls'", ",", "str", "(", "number", ")", ",", "base_url", "=", "self", ...	41.545455	17.818182
def target(self, project_module): """Returns the project target corresponding to the 'project-module'.""" assert isinstance(project_module, basestring) if project_module not in self.module2target: self.module2target[project_module] = \ b2.build.targets.ProjectTarget(p...	[ "def", "target", "(", "self", ",", "project_module", ")", ":", "assert", "isinstance", "(", "project_module", ",", "basestring", ")", "if", "project_module", "not", "in", "self", ".", "module2target", ":", "self", ".", "module2target", "[", "project_module", "...	52.333333	18.444444
def add_contributor(self, project_id, name, email, language_code): """ Adds a contributor to a project language """ self._run( url_path="contributors/add", id=project_id, name=name, email=email, language=language_code ) ...	[ "def", "add_contributor", "(", "self", ",", "project_id", ",", "name", ",", "email", ",", "language_code", ")", ":", "self", ".", "_run", "(", "url_path", "=", "\"contributors/add\"", ",", "id", "=", "project_id", ",", "name", "=", "name", ",", "email", ...	27.333333	13.5
def do_diff(self, subcmd, opts, *args): """Display the differences between two paths. usage: 1. diff [-r N[:M]] [TARGET[@REV]...] 2. diff [-r N[:M]] --old=OLD-TGT[@OLDREV] [--new=NEW-TGT[@NEWREV]] \ [PATH...] 3. diff OLD-URL[@OLDREV] NEW-URL[@NEWR...	[ "def", "do_diff", "(", "self", ",", "subcmd", ",", "opts", ",", "*", "args", ")", ":", "print", "\"'svn %s' opts: %s\"", "%", "(", "subcmd", ",", "opts", ")", "print", "\"'svn %s' args: %s\"", "%", "(", "subcmd", ",", "args", ")" ]	48.419355	27.774194
def assemble(self,roboset=None,color=None,format=None,bgset=None,sizex=300,sizey=300): """ Build our Robot! Returns the robot image itself. """ # Allow users to manually specify a robot 'set' that they like. # Ensure that this is one of the allowed choices, or allow all ...	[ "def", "assemble", "(", "self", ",", "roboset", "=", "None", ",", "color", "=", "None", ",", "format", "=", "None", ",", "bgset", "=", "None", ",", "sizex", "=", "300", ",", "sizey", "=", "300", ")", ":", "# Allow users to manually specify a robot 'set' th...	41.261905	24.785714
def _sparse_or_dense_matmul_onehot(sparse_or_dense_matrix, col_index): """Returns a (dense) column of a Tensor or SparseTensor. Args: sparse_or_dense_matrix: matrix-shaped, `float` `Tensor` or `SparseTensor`. col_index: scalar, `int` `Tensor` representing the index of the desired column. Returns: ...	[ "def", "_sparse_or_dense_matmul_onehot", "(", "sparse_or_dense_matrix", ",", "col_index", ")", ":", "if", "isinstance", "(", "sparse_or_dense_matrix", ",", "(", "tf", ".", "SparseTensor", ",", "tf", ".", "compat", ".", "v1", ".", "SparseTensorValue", ")", ")", "...	47.375	24.03125
def uifile(self): """ Returns the uifile for this scaffold. :return <str> """ output = '' # build from a zip file if zipfile.is_zipfile(self.source()): zfile = zipfile.ZipFile(self.source(), 'r') if 'properties.ui' in zfile.na...	[ "def", "uifile", "(", "self", ")", ":", "output", "=", "''", "# build from a zip file", "if", "zipfile", ".", "is_zipfile", "(", "self", ".", "source", "(", ")", ")", ":", "zfile", "=", "zipfile", ".", "ZipFile", "(", "self", ".", "source", "(", ")", ...	30.214286	17.285714
def assert_equal(self, v1, v2, **kwargs):#, desc=None, screenshot=False, safe=False): """ Check v1 is equals v2, and take screenshot if not equals Args: - desc (str): some description - safe (bool): will omit AssertionError if set to True - screenshot: can be type <No...	[ "def", "assert_equal", "(", "self", ",", "v1", ",", "v2", ",", "", "", "kwargs", ")", ":", "#, desc=None, screenshot=False, safe=False):", "is_success", "=", "v1", "==", "v2", "if", "is_success", ":", "message", "=", "\"assert equal success, %s == %s\"", "%", ...	38.823529	16.647059
def forward(self, data_batch, is_train=None): """Forward computation. Parameters ---------- data_batch : DataBatch is_train : bool Defaults to ``None``, in which case `is_train` is take as ``self.for_training``. """ assert self.binded and self.params_...	[ "def", "forward", "(", "self", ",", "data_batch", ",", "is_train", "=", "None", ")", ":", "assert", "self", ".", "binded", "and", "self", ".", "params_initialized", "self", ".", "switch_bucket", "(", "data_batch", ".", "bucket_key", ",", "data_batch", ".", ...	39.384615	19.384615
def pin_variant(institute_id, case_name, variant_id): """Pin and unpin variants to/from the list of suspects.""" institute_obj, case_obj = institute_and_case(store, institute_id, case_name) variant_obj = store.variant(variant_id) user_obj = store.user(current_user.email) link = url_for('variants.var...	[ "def", "pin_variant", "(", "institute_id", ",", "case_name", ",", "variant_id", ")", ":", "institute_obj", ",", "case_obj", "=", "institute_and_case", "(", "store", ",", "institute_id", ",", "case_name", ")", "variant_obj", "=", "store", ".", "variant", "(", "...	58.166667	16.5
def add_filter(self, filter_or_string, args, kwargs): """ Appends a filter. """ self.filters.append(build_filter(filter_or_string, args, **kwargs)) return self	[ "def", "add_filter", "(", "self", ",", "filter_or_string", ",", "", "args", ",", "", "", "kwargs", ")", ":", "self", ".", "filters", ".", "append", "(", "build_filter", "(", "filter_or_string", ",", "", "args", ",", "", "", "kwargs", ")", ")", ...	28.285714	18.285714
def hbas(self): """ :class:`~zhmcclient.HbaManager`: Access to the :term:`HBAs <HBA>` in this Partition. If the "dpm-storage-management" feature is enabled, this property is `None`. """ # We do here some lazy loading. if not self._hbas: try: ...	[ "def", "hbas", "(", "self", ")", ":", "# We do here some lazy loading.", "if", "not", "self", ".", "_hbas", ":", "try", ":", "dpm_sm", "=", "self", ".", "feature_enabled", "(", "'dpm-storage-management'", ")", "except", "ValueError", ":", "dpm_sm", "=", "False...	31.470588	17.823529
def add_view( self, baseview, name, href="", icon="", label="", category="", category_icon="", category_label="", ): """ Add your views associated with menus using this method. :param baseview: A BaseView ty...	[ "def", "add_view", "(", "self", ",", "baseview", ",", "name", ",", "href", "=", "\"\"", ",", "icon", "=", "\"\"", ",", "label", "=", "\"\"", ",", "category", "=", "\"\"", ",", "category_icon", "=", "\"\"", ",", "category_label", "=", "\"\"", ",", ")"...	34.858824	16.858824
def Hsub(T=298.15, P=101325, MW=None, AvailableMethods=False, Method=None, CASRN=''): # pragma: no cover '''This function handles the calculation of a chemical's enthalpy of sublimation. Generally this, is used by the chemical class, as all parameters are passed. This API is considered experimental, and ...	[ "def", "Hsub", "(", "T", "=", "298.15", ",", "P", "=", "101325", ",", "MW", "=", "None", ",", "AvailableMethods", "=", "False", ",", "Method", "=", "None", ",", "CASRN", "=", "''", ")", ":", "# pragma: no cover", "def", "list_methods", "(", ")", ":",...	39.5	21.055556
def prev_position(self, pos): """returns the previous position in depth-first order""" candidate = None if pos is not None: prevsib = self.prev_sibling_position(pos) # is None if first if prevsib is not None: candidate = self.last_decendant(prevsib) ...	[ "def", "prev_position", "(", "self", ",", "pos", ")", ":", "candidate", "=", "None", "if", "pos", "is", "not", "None", ":", "prevsib", "=", "self", ".", "prev_sibling_position", "(", "pos", ")", "# is None if first", "if", "prevsib", "is", "not", "None", ...	39.583333	12.25
def discover() -> List[Tuple[str, str]]: """ Scan for connected modules and instantiate handler classes """ if IS_ROBOT and os.path.isdir('/dev/modules'): devices = os.listdir('/dev/modules') else: devices = [] discovered_modules = [] module_port_regex = re.compile('\|'.join(MOD...	[ "def", "discover", "(", ")", "->", "List", "[", "Tuple", "[", "str", ",", "str", "]", "]", ":", "if", "IS_ROBOT", "and", "os", ".", "path", ".", "isdir", "(", "'/dev/modules'", ")", ":", "devices", "=", "os", ".", "listdir", "(", "'/dev/modules'", ...	35.5	16.625
def data_mod(self, args, *kwargs): """ Register a function to modify data of member Instruments. The function is not partially applied to modify member data. When the Constellation receives a function call to register a function for data modification, it passes the call to ea...	[ "def", "data_mod", "(", "self", ",", "", "args", ",", "", "", "kwargs", ")", ":", "for", "instrument", "in", "self", ".", "instruments", ":", "instrument", ".", "custom", ".", "add", "(", "", "args", ",", "", "", "kwargs", ")" ]	35.265306	23.877551
def get_reference_section_beginning(fulltext): """Get start of reference section.""" sect_start = { 'start_line': None, 'end_line': None, 'title_string': None, 'marker_pattern': None, 'marker': None, 'how_found_start': None, } # Find start of refs section...	[ "def", "get_reference_section_beginning", "(", "fulltext", ")", ":", "sect_start", "=", "{", "'start_line'", ":", "None", ",", "'end_line'", ":", "None", ",", "'title_string'", ":", "None", ",", "'marker_pattern'", ":", "None", ",", "'marker'", ":", "None", ",...	40.116279	17.953488
def add_listener(self, listener): """Add the given listener to the wrapped client. The listener will be wrapped, so that it will be called in the reactor thread. This way, it can safely use Twisted APIs. """ internal_listener = partial(self._call_in_reactor_thread, listener) ...	[ "def", "add_listener", "(", "self", ",", "listener", ")", ":", "internal_listener", "=", "partial", "(", "self", ".", "_call_in_reactor_thread", ",", "listener", ")", "self", ".", "_internal_listeners", "[", "listener", "]", "=", "internal_listener", "return", "...	47.888889	19.777778
def create_resource_object(self, type, id): """Create a resource object of type for the integer id. type should be one of the following strings: resource drawable window pixmap fontable font gc colormap cursor This functio...	[ "def", "create_resource_object", "(", "self", ",", "type", ",", "id", ")", ":", "return", "self", ".", "display", ".", "resource_classes", "[", "type", "]", "(", "self", ".", "display", ",", "id", ")" ]	32.428571	22.380952
def create_roc_plots(pwmfile, fgfa, background, outdir): """Make ROC plots for all motifs.""" motifs = read_motifs(pwmfile, fmt="pwm", as_dict=True) ncpus = int(MotifConfig().get_default_params()['ncpus']) pool = Pool(processes=ncpus) jobs = {} for bg,fname in background.items(): for m_i...	[ "def", "create_roc_plots", "(", "pwmfile", ",", "fgfa", ",", "background", ",", "outdir", ")", ":", "motifs", "=", "read_motifs", "(", "pwmfile", ",", "fmt", "=", "\"pwm\"", ",", "as_dict", "=", "True", ")", "ncpus", "=", "int", "(", "MotifConfig", "(", ...	38.827586	14.551724
def create(self, mention, max_message_length): """ Create a message :param mention: JSON object containing mention details from Twitter (or an empty dict {}) :param max_message_length: Maximum allowable length for created message :return: A random message created using a Markov c...	[ "def", "create", "(", "self", ",", "mention", ",", "max_message_length", ")", ":", "message", "=", "[", "]", "def", "message_len", "(", ")", ":", "return", "sum", "(", "[", "len", "(", "w", ")", "+", "1", "for", "w", "in", "message", "]", ")", "w...	37.8125	23.0625
def v_type_extension(ctx, stmt): """verify that the extension matches the extension definition""" (modulename, identifier) = stmt.keyword revision = stmt.i_extension_revision module = modulename_to_module(stmt.i_module, modulename, revision) if module is None: return if identifier not in...	[ "def", "v_type_extension", "(", "ctx", ",", "stmt", ")", ":", "(", "modulename", ",", "identifier", ")", "=", "stmt", ".", "keyword", "revision", "=", "stmt", ".", "i_extension_revision", "module", "=", "modulename_to_module", "(", "stmt", ".", "i_module", "...	44.965517	17.724138
def provide_session(self, start_new=False): """ Makes sure that session is still valid and provides session info :param start_new: If `True` it will always create a new session. Otherwise it will create a new session only if no session exists or the previous session timed out. :type...	[ "def", "provide_session", "(", "self", ",", "start_new", "=", "False", ")", ":", "if", "self", ".", "is_global", ":", "self", ".", "_session_info", "=", "self", ".", "_global_session_info", "self", ".", "_session_start", "=", "self", ".", "_global_session_star...	41.888889	21.277778
def main(): """ This is a Toil pipeline for the UNC best practice RNA-Seq analysis. RNA-seq fastqs are combined, aligned, sorted, filtered, and quantified. Please read the README.md located in the same directory. """ # Define Parser object and add to toil parser = build_parser() Job.Run...	[ "def", "main", "(", ")", ":", "# Define Parser object and add to toil", "parser", "=", "build_parser", "(", ")", "Job", ".", "Runner", ".", "addToilOptions", "(", "parser", ")", "args", "=", "parser", ".", "parse_args", "(", ")", "# Store inputs from argparse", ...	37.441176	13.147059
def _append_distances(self, v, distance, candidates): """ Apply distance implementation if specified """ if distance: # Normalize vector (stored vectors are normalized) nv = unitvec(v) candidates = [(x[0], x[1], self.distance.distance(x[0], nv)) for x ...	[ "def", "_append_distances", "(", "self", ",", "v", ",", "distance", ",", "candidates", ")", ":", "if", "distance", ":", "# Normalize vector (stored vectors are normalized)", "nv", "=", "unitvec", "(", "v", ")", "candidates", "=", "[", "(", "x", "[", "0", "]"...	40.555556	18.111111
def to_dict(self): """Return a dictionary representation of the error. :return: A dict with the keys: - attr: Attribute which contains the error, or "<root>" if it refers to the schema root. - errors: A list of dictionary representations of the errors. """ def ex...	[ "def", "to_dict", "(", "self", ")", ":", "def", "exception_to_dict", "(", "e", ")", ":", "try", ":", "return", "e", ".", "to_dict", "(", ")", "except", "AttributeError", ":", "return", "{", "\"type\"", ":", "e", ".", "__class__", ".", "__name__", ",", ...	34.125	19.125
def _ReadLabels(self, artifact_definition_values, artifact_definition, name): """Reads the optional artifact definition labels. Args: artifact_definition_values (dict[str, object]): artifact definition values. artifact_definition (ArtifactDefinition): an artifact definition. name (s...	[ "def", "_ReadLabels", "(", "self", ",", "artifact_definition_values", ",", "artifact_definition", ",", "name", ")", ":", "labels", "=", "artifact_definition_values", ".", "get", "(", "'labels'", ",", "[", "]", ")", "undefined_labels", "=", "set", "(", "labels", ...	35.809524	22.380952
def sms(self, message, to=None, from_=None, action=None, method=None, status_callback=None, **kwargs): """ Create a <Sms> element :param message: Message body :param to: Number to send message to :param from: Number to send message from :param action: Action ...	[ "def", "sms", "(", "self", ",", "message", ",", "to", "=", "None", ",", "from_", "=", "None", ",", "action", "=", "None", ",", "method", "=", "None", ",", "status_callback", "=", "None", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "...	29.541667	13.375
def coordinate_reproject(x, y, s_crs, t_crs): """ reproject a coordinate from one CRS to another Parameters ---------- x: int or float the X coordinate component y: int or float the Y coordinate component s_crs: int, str or :osgeo:class:`osr.SpatialReference` the...	[ "def", "coordinate_reproject", "(", "x", ",", "y", ",", "s_crs", ",", "t_crs", ")", ":", "source", "=", "crsConvert", "(", "s_crs", ",", "'osr'", ")", "target", "=", "crsConvert", "(", "t_crs", ",", "'osr'", ")", "transform", "=", "osr", ".", "Coordina...	30.625	19.208333
def check_lazy_load_terreinobject(f): ''' Decorator function to lazy load a :class:`Terreinobject`. ''' def wrapper(*args): terreinobject = args[0] if ( terreinobject._centroid is None or terreinobject._bounding_box is None or terreinobject._metadata i...	[ "def", "check_lazy_load_terreinobject", "(", "f", ")", ":", "def", "wrapper", "(", "*", "args", ")", ":", "terreinobject", "=", "args", "[", "0", "]", "if", "(", "terreinobject", ".", "_centroid", "is", "None", "or", "terreinobject", ".", "_bounding_box", ...	37.631579	17.842105
def feature_burstness(corpus, featureset_name, feature, k=5, normalize=True, s=1.1, gamma=1., **slice_kwargs): """ Estimate burstness profile for a feature over the ``'date'`` axis. Parameters ---------- corpus : :class:`.Corpus` feature : str Name of featureset in...	[ "def", "feature_burstness", "(", "corpus", ",", "featureset_name", ",", "feature", ",", "k", "=", "5", ",", "normalize", "=", "True", ",", "s", "=", "1.1", ",", "gamma", "=", "1.", ",", "", "", "slice_kwargs", ")", ":", "if", "featureset_name", "not"...	30.147059	19.470588
def dispatch(self, args, *kwargs): ''' Entry point for this class, here we decide basic stuff ''' # Get if this class is working as only a base render and List funcionality shouldn't be enabled onlybase = getattr(self, "onlybase", False) # REST not available when only...	[ "def", "dispatch", "(", "self", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "# Get if this class is working as only a base render and List funcionality shouldn't be enabled", "onlybase", "=", "getattr", "(", "self", ",", "\"onlybase\"", ",", "False", ")", "# ...	58.509259	39.861111
def print(args, *kwargs): """ Normally print function in python prints values to a stream / stdout >> print(value1, value2, sep='', end='\n', file=sys.stdout) Current package usage: ====================== print(value1, value2, sep='', end='\n', file=sys.stdout, color=None, bg_color=None, ...	[ "def", "print", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "# Pop out color and background values from kwargs", "color_name", "=", "kwargs", ".", "pop", "(", "'color'", ",", "None", ")", "bg_color", "=", "kwargs", ".", "pop", "(", "'bg_color'", ","...	43.583333	22.654762
def is_answer_available(self, assessment_section_id, item_id): """Tests if an answer is available for the given item. arg: assessment_section_id (osid.id.Id): ``Id`` of the ``AssessmentSection`` arg: item_id (osid.id.Id): ``Id`` of the ``Item`` return: (boolean) - ...	[ "def", "is_answer_available", "(", "self", ",", "assessment_section_id", ",", "item_id", ")", ":", "# Note: we need more settings elsewhere to indicate answer available conditions", "# This makes the simple assumption that answers are available only when", "# a response has been submitted fo...	46.448276	21.034483
def extract_ast_species(ast): """Extract species from ast.species set of tuples (id, label)""" species_id = "None" species_label = "None" species = [ (species_id, species_label) for (species_id, species_label) in ast.species if species_id ] if len(species) == 1: (species_id, sp...	[ "def", "extract_ast_species", "(", "ast", ")", ":", "species_id", "=", "\"None\"", "species_label", "=", "\"None\"", "species", "=", "[", "(", "species_id", ",", "species_label", ")", "for", "(", "species_id", ",", "species_label", ")", "in", "ast", ".", "sp...	28.473684	24.894737
def get_books_containing_page(cursor, uuid, version, context_uuid=None, context_version=None): """Return a list of book names and UUIDs that contain a given module UUID.""" with db_connect() as db_connection: # Uses a RealDictCursor instead of the regular cursor ...	[ "def", "get_books_containing_page", "(", "cursor", ",", "uuid", ",", "version", ",", "context_uuid", "=", "None", ",", "context_version", "=", "None", ")", ":", "with", "db_connect", "(", ")", "as", "db_connection", ":", "# Uses a RealDictCursor instead of the regul...	54.083333	19.083333
def push(remote='origin', branch='master'): """git push commit""" print(cyan("Pulling changes from repo ( %s / %s)..." % (remote, branch))) local("git push %s %s" % (remote, branch))	[ "def", "push", "(", "remote", "=", "'origin'", ",", "branch", "=", "'master'", ")", ":", "print", "(", "cyan", "(", "\"Pulling changes from repo ( %s / %s)...\"", "%", "(", "remote", ",", "branch", ")", ")", ")", "local", "(", "\"git push %s %s\"", "%", "(",...	47.75	11.5
def quaternion_about_axis(angle, axis): """Return quaternion for rotation about axis. >>> q = quaternion_about_axis(0.123, [1, 0, 0]) >>> np.allclose(q, [0.99810947, 0.06146124, 0, 0]) True """ q = np.array([0.0, axis[0], axis[1], axis[2]]) qlen = vector_norm(q) if qlen > _EPS: ...	[ "def", "quaternion_about_axis", "(", "angle", ",", "axis", ")", ":", "q", "=", "np", ".", "array", "(", "[", "0.0", ",", "axis", "[", "0", "]", ",", "axis", "[", "1", "]", ",", "axis", "[", "2", "]", "]", ")", "qlen", "=", "vector_norm", "(", ...	27.642857	15.785714
def get_backlog_configurations(self, team_context): """GetBacklogConfigurations. Gets backlog configuration for a team :param :class:`<TeamContext> <azure.devops.v5_0.work.models.TeamContext>` team_context: The team context for the operation :rtype: :class:`<BacklogConfiguration> <azure....	[ "def", "get_backlog_configurations", "(", "self", ",", "team_context", ")", ":", "project", "=", "None", "team", "=", "None", "if", "team_context", "is", "not", "None", ":", "if", "team_context", ".", "project_id", ":", "project", "=", "team_context", ".", "...	45.75	19.071429
def form_valid(self, form): # lb = SalesLines.objects.filter(pk=self.__line_pk).first() # product_old = lb.product_final product_pk = self.request.POST.get("product_final", None) quantity = self.request.POST.get("quantity", None) product_final = ProductFinal.objects.filter(pk=pr...	[ "def", "form_valid", "(", "self", ",", "form", ")", ":", "# lb = SalesLines.objects.filter(pk=self.__line_pk).first()", "# product_old = lb.product_final", "product_pk", "=", "self", ".", "request", ".", "POST", ".", "get", "(", "\"product_final\"", ",", "None", ")", ...	47.025	20.825
def _isub(self, other): """Discard the elements of other from self. if isinstance(it, _basebag): This runs in O(it.num_unique_elements()) else: This runs in O(len(it)) """ if isinstance(other, _basebag): for elem, other_count in other.counts(): try: self._increment_count(elem, -other_count)...	[ "def", "_isub", "(", "self", ",", "other", ")", ":", "if", "isinstance", "(", "other", ",", "_basebag", ")", ":", "for", "elem", ",", "other_count", "in", "other", ".", "counts", "(", ")", ":", "try", ":", "self", ".", "_increment_count", "(", "elem"...	22.666667	17.047619
def stats(self, name, value): """ Calculates min/average/max statistics based on the current and previous values. :param name: a counter name of Statistics type :param value: a value to update statistics """ counter = self.get(name, CounterType.Statistics) self....	[ "def", "stats", "(", "self", ",", "name", ",", "value", ")", ":", "counter", "=", "self", ".", "get", "(", "name", ",", "CounterType", ".", "Statistics", ")", "self", ".", "_calculate_stats", "(", "counter", ",", "value", ")", "self", ".", "_update", ...	33.181818	18.272727
def hashes_above(path, line_number): """Yield hashes from contiguous comment lines before line ``line_number``. """ def hash_lists(path): """Yield lists of hashes appearing between non-comment lines. The lists will be in order of appearance and, for each non-empty list, their place...	[ "def", "hashes_above", "(", "path", ",", "line_number", ")", ":", "def", "hash_lists", "(", "path", ")", ":", "\"\"\"Yield lists of hashes appearing between non-comment lines.\n\n The lists will be in order of appearance and, for each non-empty\n list, their place in the re...	41.074074	17.851852
def _ExtractGoogleDocsSearchQuery(self, url): """Extracts a search query from a Google docs URL. Google Docs: https://docs.google.com/.*/u/0/?q=query Args: url (str): URL. Returns: str: search query or None if no query was found. """ if 'q=' not in url: return None lin...	[ "def", "_ExtractGoogleDocsSearchQuery", "(", "self", ",", "url", ")", ":", "if", "'q='", "not", "in", "url", ":", "return", "None", "line", "=", "self", ".", "_GetBetweenQEqualsAndAmpersand", "(", "url", ")", "if", "not", "line", ":", "return", "None", "re...	21.894737	22.052632
def magic_api(word): """ This is our magic API that we're simulating. It'll return a random number and a cache timer. """ result = sum(ord(x)-65 + randint(1,50) for x in word) delta = timedelta(seconds=result) cached_until = datetime.now() + delta return result, cached_until	[ "def", "magic_api", "(", "word", ")", ":", "result", "=", "sum", "(", "ord", "(", "x", ")", "-", "65", "+", "randint", "(", "1", ",", "50", ")", "for", "x", "in", "word", ")", "delta", "=", "timedelta", "(", "seconds", "=", "result", ")", "cach...	30.8	11
def _make_stream_transport(self): """Create an AdbStreamTransport with a newly allocated local_id.""" msg_queue = queue.Queue() with self._stream_transport_map_lock: # Start one past the last id we used, and grab the first available one. # This mimics the ADB behavior of 'increment an unsigned a...	[ "def", "_make_stream_transport", "(", "self", ")", ":", "msg_queue", "=", "queue", ".", "Queue", "(", ")", "with", "self", ".", "_stream_transport_map_lock", ":", "# Start one past the last id we used, and grab the first available one.", "# This mimics the ADB behavior of 'incr...	54.814815	21.148148
def inject(self, inst, renames): """Injects dependencies and propagates dependency injector""" if renames: di = self.clone(renames) else: di = self pro = di._provides inst.__injections_source__ = di deps = getattr(inst, '__injections__', None) ...	[ "def", "inject", "(", "self", ",", "inst", ",", "", "", "renames", ")", ":", "if", "renames", ":", "di", "=", "self", ".", "clone", "(", "", "", "renames", ")", "else", ":", "di", "=", "self", "pro", "=", "di", ".", "_provides", "inst", "."...	35.227273	13.818182
def transform_regex_replace(source, pattern, rewrite, name=None): """Replace all substrings from `needle` to corresponding strings in `haystack` with source. Args: source: `Tensor` or `SparseTensor` of any shape, source strings for replacing. pattern: List of RE2 patterns to search in source ...	[ "def", "transform_regex_replace", "(", "source", ",", "pattern", ",", "rewrite", ",", "name", "=", "None", ")", ":", "with", "ops", ".", "name_scope", "(", "name", ",", "\"TransformRegexReplace\"", ",", "[", "source", "]", ")", ":", "source", "=", "convert...	44.291667	24.708333
def f1_score(df, col_true=None, col_pred='precision_result', pos_label=1, average=None): r""" Compute f-1 score of a predicted DataFrame. f-1 is defined as .. math:: \frac{2 \cdot precision \cdot recall}{precision + recall} :Parameters: - df - predicted data frame - **col...	[ "def", "f1_score", "(", "df", ",", "col_true", "=", "None", ",", "col_pred", "=", "'precision_result'", ",", "pos_label", "=", "1", ",", "average", "=", "None", ")", ":", "if", "not", "col_pred", ":", "col_pred", "=", "get_field_name_by_role", "(", "df", ...	32.53125	29.765625
def sliding_window(image, step_size, window_size, mask=None, only_whole=True): """ Creates generator of sliding windows. :param image: input image :param step_size: number of pixels we are going to skip in both the (x, y) direction :param window_size: the width and height of the window we are going ...	[ "def", "sliding_window", "(", "image", ",", "step_size", ",", "window_size", ",", "mask", "=", "None", ",", "only_whole", "=", "True", ")", ":", "if", "mask", "is", "None", ":", "mask", "=", "np", ".", "ones", "(", "image", ".", "shape", ",", "dtype"...	51.703704	20.074074
def create_textview(self, wrap_mode=Gtk.WrapMode.WORD_CHAR, justify=Gtk.Justification.LEFT, visible=True, editable=True): """ Function creates a text view with wrap_mode and justification """ text_view = Gtk.TextView() text_view.set_wrap_mode(wrap_mode) text_view....	[ "def", "create_textview", "(", "self", ",", "wrap_mode", "=", "Gtk", ".", "WrapMode", ".", "WORD_CHAR", ",", "justify", "=", "Gtk", ".", "Justification", ".", "LEFT", ",", "visible", "=", "True", ",", "editable", "=", "True", ")", ":", "text_view", "=", ...	38.285714	13.857143
def json_worker(self, mask, cache_id=None, cache_method="string", cache_section="www"): """A function annotation that adds a worker request. A worker request is a POST request that is computed asynchronously. That is, the actual task is performed in a different thread a...	[ "def", "json_worker", "(", "self", ",", "mask", ",", "cache_id", "=", "None", ",", "cache_method", "=", "\"string\"", ",", "cache_section", "=", "\"www\"", ")", ":", "use_cache", "=", "cache_id", "is", "not", "None", "def", "wrapper", "(", "fun", ")", ":...	43.334405	14.434084
def kill_all(self, bIgnoreExceptions = False): """ Kills from all processes currently being debugged. @type bIgnoreExceptions: bool @param bIgnoreExceptions: C{True} to ignore any exceptions that may be raised when killing each process. C{False} to stop and raise an ...	[ "def", "kill_all", "(", "self", ",", "bIgnoreExceptions", "=", "False", ")", ":", "for", "pid", "in", "self", ".", "get_debugee_pids", "(", ")", ":", "self", ".", "kill", "(", "pid", ",", "bIgnoreExceptions", "=", "bIgnoreExceptions", ")" ]	41.642857	17.5
def _fetch_langs(): """Fetch (scrape) languages from Google Translate. Google Translate loads a JavaScript Array of 'languages codes' that can be spoken. We intersect this list with all the languages Google Translate provides to get the ones that support text-to-speech. Returns: dict: A di...	[ "def", "_fetch_langs", "(", ")", ":", "# Load HTML", "page", "=", "requests", ".", "get", "(", "URL_BASE", ")", "soup", "=", "BeautifulSoup", "(", "page", ".", "content", ",", "'html.parser'", ")", "# JavaScript URL", "# The <script src=''> path can change, but not ...	42.875	23.5
def clear(self): """ Clear the cache. """ not_removed = [] for fn in os.listdir(self.base): fn = os.path.join(self.base, fn) try: if os.path.islink(fn) or os.path.isfile(fn): os.remove(fn) elif os.path.is...	[ "def", "clear", "(", "self", ")", ":", "not_removed", "=", "[", "]", "for", "fn", "in", "os", ".", "listdir", "(", "self", ".", "base", ")", ":", "fn", "=", "os", ".", "path", ".", "join", "(", "self", ".", "base", ",", "fn", ")", "try", ":",...	29.866667	9.466667
def _compose_range(pattern, rule, fill=2): """oc._compose_range('Week', 'Week04-Week09', fill=2) - hash a range. This takes apart a range of times and returns a dictionary of all intervening values appropriately set. The fill value is used to format the time numbers. """ keys = [] mask = l...	[ "def", "_compose_range", "(", "pattern", ",", "rule", ",", "fill", "=", "2", ")", ":", "keys", "=", "[", "]", "mask", "=", "len", "(", "pattern", ")", "for", "rule", "in", "str", ".", "split", "(", "rule", ",", "\",\"", ")", ":", "if", "not", "...	31.882353	13.823529
def get_new_driver(self, browser=None, headless=None, servername=None, port=None, proxy=None, agent=None, switch_to=True, cap_file=None, disable_csp=None): """ This method spins up an extra browser for tests that require more than one. The first browser ...	[ "def", "get_new_driver", "(", "self", ",", "browser", "=", "None", ",", "headless", "=", "None", ",", "servername", "=", "None", ",", "port", "=", "None", ",", "proxy", "=", "None", ",", "agent", "=", "None", ",", "switch_to", "=", "True", ",", "cap_...	51.708738	19.757282
def request(self, method, url, params=None, data=None, headers=None, auth=None, timeout=None, allow_redirects=False): """ Make an HTTP Request with parameters provided. :param str method: The HTTP method to use :param str url: The URL to request :param dict param...	[ "def", "request", "(", "self", ",", "method", ",", "url", ",", "params", "=", "None", ",", "data", "=", "None", ",", "headers", "=", "None", ",", "auth", "=", "None", ",", "timeout", "=", "None", ",", "allow_redirects", "=", "False", ")", ":", "kwa...	38.037037	23.074074
def extract_objects(self, fname, type_filter=None): '''Extract objects from a source file Args: fname(str): Name of file to read from type_filter (class, optional): Object class to filter results Returns: List of objects extracted from the file. ''' objects = [] if fname in se...	[ "def", "extract_objects", "(", "self", ",", "fname", ",", "type_filter", "=", "None", ")", ":", "objects", "=", "[", "]", "if", "fname", "in", "self", ".", "object_cache", ":", "objects", "=", "self", ".", "object_cache", "[", "fname", "]", "else", ":"...	28.954545	19.409091
def renegotiate(self): """ Renegotiate the session. :return: True if the renegotiation can be started, False otherwise :rtype: bool """ if not self.renegotiate_pending(): _openssl_assert(_lib.SSL_renegotiate(self._ssl) == 1) return True re...	[ "def", "renegotiate", "(", "self", ")", ":", "if", "not", "self", ".", "renegotiate_pending", "(", ")", ":", "_openssl_assert", "(", "_lib", ".", "SSL_renegotiate", "(", "self", ".", "_ssl", ")", "==", "1", ")", "return", "True", "return", "False" ]	29.090909	16.727273
def changelist_view(self, request, extra_context=None): """ Redirect to the changelist view for subclasses. """ if self.model is not self.concrete_model: return HttpResponseRedirect( admin_url(self.concrete_model, "changelist")) extra_context = extra_context or {} ...	[ "def", "changelist_view", "(", "self", ",", "request", ",", "extra_context", "=", "None", ")", ":", "if", "self", ".", "model", "is", "not", "self", ".", "concrete_model", ":", "return", "HttpResponseRedirect", "(", "admin_url", "(", "self", ".", "concrete_m...	43.181818	16.545455
def get_chunk_hash(file, seed, filesz=None, chunksz=DEFAULT_CHUNK_SIZE, bufsz=DEFAULT_BUFFER_SIZE): """returns a hash of a chunk of the file provided. the position of the chunk is determined by the seed. additi...	[ "def", "get_chunk_hash", "(", "file", ",", "seed", ",", "filesz", "=", "None", ",", "chunksz", "=", "DEFAULT_CHUNK_SIZE", ",", "bufsz", "=", "DEFAULT_BUFFER_SIZE", ")", ":", "if", "(", "filesz", "is", "None", ")", ":", "file", ".", "seek", "(", "0", ",...	37.485714	14.171429
def _get_column_type(self,column): """ Return 'numeric' if the column is of type integer or real, otherwise return 'string'. """ ctype = column.GetType() if ctype in [ogr.OFTInteger, ogr.OFTReal]: return 'numeric' else: return 'string'	[ "def", "_get_column_type", "(", "self", ",", "column", ")", ":", "ctype", "=", "column", ".", "GetType", "(", ")", "if", "ctype", "in", "[", "ogr", ".", "OFTInteger", ",", "ogr", ".", "OFTReal", "]", ":", "return", "'numeric'", "else", ":", "return", ...	36.5	9.5
def accumulate(iterable): " Return series of accumulated sums. " iterator = iter(iterable) sum_data = next(iterator) yield sum_data for el in iterator: sum_data += el yield sum_data	[ "def", "accumulate", "(", "iterable", ")", ":", "iterator", "=", "iter", "(", "iterable", ")", "sum_data", "=", "next", "(", "iterator", ")", "yield", "sum_data", "for", "el", "in", "iterator", ":", "sum_data", "+=", "el", "yield", "sum_data" ]	24	16
def from_string(cls, string, *, default_func=None): '''Construct a Service from a string. If default_func is provided and any ServicePart is missing, it is called with default_func(protocol, part) to obtain the missing part. ''' if not isinstance(string, str): raise ...	[ "def", "from_string", "(", "cls", ",", "string", ",", "*", ",", "default_func", "=", "None", ")", ":", "if", "not", "isinstance", "(", "string", ",", "str", ")", ":", "raise", "TypeError", "(", "f'service must be a string: {string}'", ")", "parts", "=", "s...	41.037037	22.148148
def qos_queue_scheduler_strict_priority_dwrr_traffic_class6(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") qos = ET.SubElement(config, "qos", xmlns="urn:brocade.com:mgmt:brocade-qos") queue = ET.SubElement(qos, "queue") scheduler = ET.SubElement...	[ "def", "qos_queue_scheduler_strict_priority_dwrr_traffic_class6", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "qos", "=", "ET", ".", "SubElement", "(", "config", ",", "\"qos\"", ",", "xmlns", "...	49.384615	20.384615
def post(self, url, data=None, kwargs): """Sends a POST request. Returns :class:`Response` object. :param url: URL for the new :class:`Request` object. :param data: (optional) Dictionary or bytes to send in the body of the :class:`Request`. :param kwargs: Optional arguments that ``r...	[ "def", "post", "(", "self", ",", "url", ",", "data", "=", "None", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "request", "(", "'post'", ",", "url", ",", "data", "=", "data", ",", "", "", "kwargs", ")" ]	44.666667	22.777778
def normalize_value(value, snake_case=True): """ :param value: :return value: """ if not isinstance(value, six.string_types): raise TypeError("the value passed to value must be a string") if snake_case: s1 = first_cap_re.sub(r'\1_\2', value) new_value = all_cap_re.sub(r'...	[ "def", "normalize_value", "(", "value", ",", "snake_case", "=", "True", ")", ":", "if", "not", "isinstance", "(", "value", ",", "six", ".", "string_types", ")", ":", "raise", "TypeError", "(", "\"the value passed to value must be a string\"", ")", "if", "snake_c...	27.533333	19.266667
def render_widget(self, request, widget_id): '''Returns rendered widget in JSON response''' widget = get_widget_from_id(widget_id) response = widget.render(**{'request': request}) return JsonResponse({'result': response, 'id': widget_id})	[ "def", "render_widget", "(", "self", ",", "request", ",", "widget_id", ")", ":", "widget", "=", "get_widget_from_id", "(", "widget_id", ")", "response", "=", "widget", ".", "render", "(", "", "", "{", "'request'", ":", "request", "}", ")", "return", "J...	33.25	23.25
def write_config(configuration): """Helper to write the JSON configuration to a file""" with open(CONFIG_PATH, 'w') as f: json.dump(configuration, f, indent=2, sort_keys=True)	[ "def", "write_config", "(", "configuration", ")", ":", "with", "open", "(", "CONFIG_PATH", ",", "'w'", ")", "as", "f", ":", "json", ".", "dump", "(", "configuration", ",", "f", ",", "indent", "=", "2", ",", "sort_keys", "=", "True", ")" ]	47	8
def connection_lost(self, reason): """Protocols connection lost handler. """ LOG.info( 'Connection to peer %s lost, reason: %s Resetting ' 'retry connect loop: %s' % (self._neigh_conf.ip_address, reason, self._connect_retry_event.is_set()), ...	[ "def", "connection_lost", "(", "self", ",", "reason", ")", ":", "LOG", ".", "info", "(", "'Connection to peer %s lost, reason: %s Resetting '", "'retry connect loop: %s'", "%", "(", "self", ".", "_neigh_conf", ".", "ip_address", ",", "reason", ",", "self", ".", "_...	37.529412	13.588235
def partial_derivative(self, X, y=0): """Compute partial derivative :math:`C(u\|v)` of cumulative density. Args: X: `np.ndarray` y: `float` Returns: """ self.check_fit() U, V = self.split_matrix(X) if self.theta == 1: return...	[ "def", "partial_derivative", "(", "self", ",", "X", ",", "y", "=", "0", ")", ":", "self", ".", "check_fit", "(", ")", "U", ",", "V", "=", "self", ".", "split_matrix", "(", "X", ")", "if", "self", ".", "theta", "==", "1", ":", "return", "V", "el...	27.041667	20.625
def free(**kwargs): ''' Stop synchronization of directory. ''' output, err = cli_syncthing_adapter.free(kwargs['path']) click.echo("%s" % output, err=err)	[ "def", "free", "(", "", "", "kwargs", ")", ":", "output", ",", "err", "=", "cli_syncthing_adapter", ".", "free", "(", "kwargs", "[", "'path'", "]", ")", "click", ".", "echo", "(", "\"%s\"", "%", "output", ",", "err", "=", "err", ")" ]	31.4	17.4
def authenticate(username, password): """ Returns: a dict with: pk: the pk of the user token: dict containing all the data from the api (access_token, refresh_token, expires_at etc.) user_data: dict containing user data such as first_na...	[ "def", "authenticate", "(", "username", ",", "password", ")", ":", "session", "=", "MoJOAuth2Session", "(", "client", "=", "LegacyApplicationClient", "(", "client_id", "=", "settings", ".", "API_CLIENT_ID", ")", ")", "token", "=", "session", ".", "fetch_token", ...	29.323529	18.264706
def marshal_with(self, schema, envelope=None): """ A decorator that apply marshalling to the return values of your methods. :param schema: The schema class to be used to serialize the values. :param envelope: The key used to envelope the data. :return: A function. """ ...	[ "def", "marshal_with", "(", "self", ",", "schema", ",", "envelope", "=", "None", ")", ":", "# schema is pre instantiated to avoid instantiate it", "# on every request", "schema_is_class", "=", "isclass", "(", "schema", ")", "schema_cache", "=", "schema", "(", ")", "...	37.314286	18.685714
def _execute(self, source, hidden): """ Execute 'source'. If 'hidden', do not show any output. See parent class :meth:`execute` docstring for full details. """ msg_id = self.kernel_manager.shell_channel.execute(source, hidden) self._request_info['execute'][msg_id] = self._Execut...	[ "def", "_execute", "(", "self", ",", "source", ",", "hidden", ")", ":", "msg_id", "=", "self", ".", "kernel_manager", ".", "shell_channel", ".", "execute", "(", "source", ",", "hidden", ")", "self", ".", "_request_info", "[", "'execute'", "]", "[", "msg_...	43	18.3
def unionIntoArray(self, inputVector, outputVector, forceOutput=False): """ Create a union of the inputVector and copy the result into the outputVector Parameters: ---------------------------- @param inputVector: The inputVector can be either a full numpy array containing 0's...	[ "def", "unionIntoArray", "(", "self", ",", "inputVector", ",", "outputVector", ",", "forceOutput", "=", "False", ")", ":", "if", "isinstance", "(", "inputVector", ",", "numpy", ".", "ndarray", ")", ":", "if", "inputVector", ".", "size", "==", "self", ".", ...	40.275	20.725
def exons(self, contig=None, strand=None): """ Create exon object for all exons in the database, optionally restrict to a particular chromosome using the `contig` argument. """ # DataFrame with single column called "exon_id" exon_ids = self.exon_ids(contig=contig, strand=...	[ "def", "exons", "(", "self", ",", "contig", "=", "None", ",", "strand", "=", "None", ")", ":", "# DataFrame with single column called \"exon_id\"", "exon_ids", "=", "self", ".", "exon_ids", "(", "contig", "=", "contig", ",", "strand", "=", "strand", ")", "re...	37.909091	14.818182
def disable_logger(logger_name: str, propagate: bool = False): """Disable output for the logger of the specified name.""" log = logging.getLogger(logger_name) log.propagate = propagate for handler in log.handlers: log.removeHandler(handler)	[ "def", "disable_logger", "(", "logger_name", ":", "str", ",", "propagate", ":", "bool", "=", "False", ")", ":", "log", "=", "logging", ".", "getLogger", "(", "logger_name", ")", "log", ".", "propagate", "=", "propagate", "for", "handler", "in", "log", "....	43.166667	7.833333
def get_all_values_of_all_params(self): """ Return a dictionary containing all values that are taken by all available parameters. Always returns the parameter list in alphabetical order. """ values = collections.OrderedDict([[p, []] for p in ...	[ "def", "get_all_values_of_all_params", "(", "self", ")", ":", "values", "=", "collections", ".", "OrderedDict", "(", "[", "[", "p", ",", "[", "]", "]", "for", "p", "in", "sorted", "(", "self", ".", "get_params", "(", ")", ")", "]", ")", "for", "resul...	35	19.833333
def birthdays_subcommand(vcard_list, parsable): """Print birthday contact table. :param vcard_list: the vcards to search for matching entries which should be printed :type vcard_list: list of carddav_object.CarddavObject :param parsable: machine readable output: columns devided by tabulator (\t...	[ "def", "birthdays_subcommand", "(", "vcard_list", ",", "parsable", ")", ":", "# filter out contacts without a birthday date", "vcard_list", "=", "[", "vcard", "for", "vcard", "in", "vcard_list", "if", "vcard", ".", "get_birthday", "(", ")", "is", "not", "None", "]...	40.981132	20.283019
def start_blocking(self): """ Start the advertiser in the background, but wait until it is ready """ self._cav_started.clear() self.start() self._cav_started.wait()	[ "def", "start_blocking", "(", "self", ")", ":", "self", ".", "_cav_started", ".", "clear", "(", ")", "self", ".", "start", "(", ")", "self", ".", "_cav_started", ".", "wait", "(", ")" ]	32	15
def parse_unit(expression): """Evaluate a python expression string containing constants Argument: \| ``expression`` -- A string containing a numerical expressions including unit conversions. In addition to the variables in this module, also the following ...	[ "def", "parse_unit", "(", "expression", ")", ":", "try", ":", "g", "=", "globals", "(", ")", "g", ".", "update", "(", "shorthands", ")", "return", "float", "(", "eval", "(", "str", "(", "expression", ")", ",", "g", ")", ")", "except", ":", "raise",...	32.235294	23.058824
def acknowledge_svc_problem(self, service, sticky, notify, author, comment): """Acknowledge a service problem Format of the line that triggers function call:: ACKNOWLEDGE_SVC_PROBLEM;<host_name>;<service_description>;<sticky>;<notify>; <persistent:obsolete>;<author>;<comment> :...	[ "def", "acknowledge_svc_problem", "(", "self", ",", "service", ",", "sticky", ",", "notify", ",", "author", ",", "comment", ")", ":", "notification_period", "=", "None", "if", "getattr", "(", "service", ",", "'notification_period'", ",", "None", ")", "is", "...	51.291667	24.583333
def final_spin_from_f0_tau(f0, tau, l=2, m=2): """Returns the final spin based on the given frequency and damping time. .. note:: Currently, only l = m = 2 is supported. Any other indices will raise a ``KeyError``. Parameters ---------- f0 : float or array Frequency of the ...	[ "def", "final_spin_from_f0_tau", "(", "f0", ",", "tau", ",", "l", "=", "2", ",", "m", "=", "2", ")", ":", "f0", ",", "tau", ",", "input_is_array", "=", "ensurearray", "(", "f0", ",", "tau", ")", "# from Berti et al. 2006", "a", ",", "b", ",", "c", ...	30.119048	16.714286
def addSubparser(subparsers, subcommand, description): """ Add a subparser with subcommand to the subparsers object """ parser = subparsers.add_parser( subcommand, description=description, help=description) return parser	[ "def", "addSubparser", "(", "subparsers", ",", "subcommand", ",", "description", ")", ":", "parser", "=", "subparsers", ".", "add_parser", "(", "subcommand", ",", "description", "=", "description", ",", "help", "=", "description", ")", "return", "parser" ]	34.571429	12
def create_namespaced_cron_job(self, namespace, body, **kwargs): """ create a CronJob This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.create_namespaced_cron_job(namespace, body, async_req=T...	[ "def", "create_namespaced_cron_job", "(", "self", ",", "namespace", ",", "body", ",", "", "", "kwargs", ")", ":", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")", ":", "return", "self", "."...	66.25	39.583333
def make_qemu_dirs(max_qemu_id, output_dir, topology_name): """ Create Qemu VM working directories if required :param int max_qemu_id: Number of directories to create :param str output_dir: Output directory :param str topology_name: Topology name """ if max_qemu_id is not None: for ...	[ "def", "make_qemu_dirs", "(", "max_qemu_id", ",", "output_dir", ",", "topology_name", ")", ":", "if", "max_qemu_id", "is", "not", "None", ":", "for", "i", "in", "range", "(", "1", ",", "max_qemu_id", "+", "1", ")", ":", "qemu_dir", "=", "os", ".", "pat...	38.769231	12.461538
def section(self, section, skip=['type', 'order']): """ Return section items, skip selected (type/order by default) """ return [(key, val) for key, val in self.parser.items(section) if key not in skip]	[ "def", "section", "(", "self", ",", "section", ",", "skip", "=", "[", "'type'", ",", "'order'", "]", ")", ":", "return", "[", "(", "key", ",", "val", ")", "for", "key", ",", "val", "in", "self", ".", "parser", ".", "items", "(", "section", ")", ...	57.5	11.25
def parse_info(wininfo_name, egginfo_name): """Extract metadata from filenames. Extracts the 4 metadataitems needed (name, version, pyversion, arch) from the installer filename and the name of the egg-info directory embedded in the zipfile (if any). The egginfo filename has the format:: ...	[ "def", "parse_info", "(", "wininfo_name", ",", "egginfo_name", ")", ":", "egginfo", "=", "None", "if", "egginfo_name", ":", "egginfo", "=", "egg_info_re", ".", "search", "(", "egginfo_name", ")", "if", "not", "egginfo", ":", "raise", "ValueError", "(", "\"Eg...	39.957746	22.098592
def connect_cloudformation(aws_access_key_id=None, aws_secret_access_key=None, **kwargs): """ :type aws_access_key_id: string :param aws_access_key_id: Your AWS Access Key ID :type aws_secret_access_key: string :param aws_secret_access_key: Your AWS Secret Access Key :rtype: :class:`boto.cloud...	[ "def", "connect_cloudformation", "(", "aws_access_key_id", "=", "None", ",", "aws_secret_access_key", "=", "None", ",", "", "", "kwargs", ")", ":", "from", "boto", ".", "cloudformation", "import", "CloudFormationConnection", "return", "CloudFormationConnection", "("...	43.153846	21.461538
def _auth_headers(self): """Headers required to authenticate a request. Assumes your ``Context`` already has a authentication token, either provided explicitly or obtained by logging into the Splunk instance. :returns: A list of 2-tuples containing key and value """ ...	[ "def", "_auth_headers", "(", "self", ")", ":", "if", "self", ".", "token", "is", "_NoAuthenticationToken", ":", "return", "[", "]", "else", ":", "# Ensure the token is properly formatted", "if", "self", ".", "token", ".", "startswith", "(", "'Splunk '", ")", "...	35.222222	16.833333

def print_warning_results(results, level=0): """Print warning messages found during validation. """ marker = _YELLOW + "[!] " for warning in results.warnings: print_level(logger.warning, marker + "Warning: %s", level, warning)

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35

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def resolve_domains(domains, disable_zone=False): """ Resolves the list of domains and returns the ips. """ dnsresolver = dns.resolver.Resolver() ips = [] for domain in domains: print_notification("Resolving {}".format(domain)) try: result = dnsresolver.query(do...

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30.473684

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def validate(self, model, checks=[]): """Use a defined schema to validate the medium table format.""" custom = [ check_partial(reaction_id_check, frozenset(r.id for r in model.reactions)) ] super(Medium, self).validate(model=model, checks=checks + cu...

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45.571429

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def _set_address(self, v, load=False): """ Setter method for address, mapped from YANG variable /interface/management/ip/address (container) If this variable is read-only (config: false) in the source YANG file, then _set_address is considered as a private method. Backends looking to populate this v...

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69.36

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def construct_request_uri(local_dir, base_path, **kwargs): """ Constructs a special redirect_uri to be used when communicating with one OP. Each OP should get their own redirect_uris. :param local_dir: Local directory in which to place the file :param base_path: Base URL to start with :para...

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35.142857

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def rmarkdown_draft(filename, template, package): """ create a draft rmarkdown file from an installed template """ if file_exists(filename): return filename draft_template = Template( 'rmarkdown::draft("$filename", template="$template", package="$package", edit=FALSE)' ) draf...

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43.470588

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def add_catalogue(self, catalogue, overlay=False): ''' :param catalogue: Earthquake catalogue as instance of :class:`openquake.hmtk.seismicity.catalogue.Catalogue` :param dict config: Configuration parameters of the algorithm, containing the follo...

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46

21.220339

def pull_request(self, number): """Get the pull request indicated by ``number``. :param int number: (required), number of the pull request. :returns: :class:`PullRequest <github3.pulls.PullRequest>` """ json = None if int(number) > 0: url = self._build_url('p...

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41.545455

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def target(self, project_module): """Returns the project target corresponding to the 'project-module'.""" assert isinstance(project_module, basestring) if project_module not in self.module2target: self.module2target[project_module] = \ b2.build.targets.ProjectTarget(p...

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52.333333

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def add_contributor(self, project_id, name, email, language_code): """ Adds a contributor to a project language """ self._run( url_path="contributors/add", id=project_id, name=name, email=email, language=language_code ) ...

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27.333333

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def do_diff(self, subcmd, opts, *args): """Display the differences between two paths. usage: 1. diff [-r N[:M]] [TARGET[@REV]...] 2. diff [-r N[:M]] --old=OLD-TGT[@OLDREV] [--new=NEW-TGT[@NEWREV]] \ [PATH...] 3. diff OLD-URL[@OLDREV] NEW-URL[@NEWR...

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48.419355

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def assemble(self,roboset=None,color=None,format=None,bgset=None,sizex=300,sizey=300): """ Build our Robot! Returns the robot image itself. """ # Allow users to manually specify a robot 'set' that they like. # Ensure that this is one of the allowed choices, or allow all ...

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41.261905

24.785714

def _sparse_or_dense_matmul_onehot(sparse_or_dense_matrix, col_index): """Returns a (dense) column of a Tensor or SparseTensor. Args: sparse_or_dense_matrix: matrix-shaped, `float` `Tensor` or `SparseTensor`. col_index: scalar, `int` `Tensor` representing the index of the desired column. Returns: ...

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47.375

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def uifile(self): """ Returns the uifile for this scaffold. :return <str> """ output = '' # build from a zip file if zipfile.is_zipfile(self.source()): zfile = zipfile.ZipFile(self.source(), 'r') if 'properties.ui' in zfile.na...

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30.214286

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def assert_equal(self, v1, v2, **kwargs):#, desc=None, screenshot=False, safe=False): """ Check v1 is equals v2, and take screenshot if not equals Args: - desc (str): some description - safe (bool): will omit AssertionError if set to True - screenshot: can be type <No...

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38.823529

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def forward(self, data_batch, is_train=None): """Forward computation. Parameters ---------- data_batch : DataBatch is_train : bool Defaults to ``None``, in which case `is_train` is take as ``self.for_training``. """ assert self.binded and self.params_...

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39.384615

19.384615

def pin_variant(institute_id, case_name, variant_id): """Pin and unpin variants to/from the list of suspects.""" institute_obj, case_obj = institute_and_case(store, institute_id, case_name) variant_obj = store.variant(variant_id) user_obj = store.user(current_user.email) link = url_for('variants.var...

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58.166667

16.5

def add_filter(self, filter_or_string, *args, **kwargs): """ Appends a filter. """ self.filters.append(build_filter(filter_or_string, *args, **kwargs)) return self

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28.285714

18.285714

def hbas(self): """ :class:`~zhmcclient.HbaManager`: Access to the :term:`HBAs <HBA>` in this Partition. If the "dpm-storage-management" feature is enabled, this property is `None`. """ # We do here some lazy loading. if not self._hbas: try: ...

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31.470588

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def add_view( self, baseview, name, href="", icon="", label="", category="", category_icon="", category_label="", ): """ Add your views associated with menus using this method. :param baseview: A BaseView ty...

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34.858824

16.858824

def Hsub(T=298.15, P=101325, MW=None, AvailableMethods=False, Method=None, CASRN=''): # pragma: no cover '''This function handles the calculation of a chemical's enthalpy of sublimation. Generally this, is used by the chemical class, as all parameters are passed. This API is considered experimental, and ...

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39.5

21.055556

def prev_position(self, pos): """returns the previous position in depth-first order""" candidate = None if pos is not None: prevsib = self.prev_sibling_position(pos) # is None if first if prevsib is not None: candidate = self.last_decendant(prevsib) ...

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39.583333

12.25

def discover() -> List[Tuple[str, str]]: """ Scan for connected modules and instantiate handler classes """ if IS_ROBOT and os.path.isdir('/dev/modules'): devices = os.listdir('/dev/modules') else: devices = [] discovered_modules = [] module_port_regex = re.compile('|'.join(MOD...

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35.5

16.625

def data_mod(self, *args, **kwargs): """ Register a function to modify data of member Instruments. The function is not partially applied to modify member data. When the Constellation receives a function call to register a function for data modification, it passes the call to ea...

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35.265306

23.877551

def get_reference_section_beginning(fulltext): """Get start of reference section.""" sect_start = { 'start_line': None, 'end_line': None, 'title_string': None, 'marker_pattern': None, 'marker': None, 'how_found_start': None, } # Find start of refs section...

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40.116279

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def add_listener(self, listener): """Add the given listener to the wrapped client. The listener will be wrapped, so that it will be called in the reactor thread. This way, it can safely use Twisted APIs. """ internal_listener = partial(self._call_in_reactor_thread, listener) ...

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47.888889

19.777778

def create_resource_object(self, type, id): """Create a resource object of type for the integer id. type should be one of the following strings: resource drawable window pixmap fontable font gc colormap cursor This functio...

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32.428571

22.380952

def create_roc_plots(pwmfile, fgfa, background, outdir): """Make ROC plots for all motifs.""" motifs = read_motifs(pwmfile, fmt="pwm", as_dict=True) ncpus = int(MotifConfig().get_default_params()['ncpus']) pool = Pool(processes=ncpus) jobs = {} for bg,fname in background.items(): for m_i...

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38.827586

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def create(self, mention, max_message_length): """ Create a message :param mention: JSON object containing mention details from Twitter (or an empty dict {}) :param max_message_length: Maximum allowable length for created message :return: A random message created using a Markov c...

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def v_type_extension(ctx, stmt): """verify that the extension matches the extension definition""" (modulename, identifier) = stmt.keyword revision = stmt.i_extension_revision module = modulename_to_module(stmt.i_module, modulename, revision) if module is None: return if identifier not in...

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def provide_session(self, start_new=False): """ Makes sure that session is still valid and provides session info :param start_new: If `True` it will always create a new session. Otherwise it will create a new session only if no session exists or the previous session timed out. :type...

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def main(): """ This is a Toil pipeline for the UNC best practice RNA-Seq analysis. RNA-seq fastqs are combined, aligned, sorted, filtered, and quantified. Please read the README.md located in the same directory. """ # Define Parser object and add to toil parser = build_parser() Job.Run...

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def _append_distances(self, v, distance, candidates): """ Apply distance implementation if specified """ if distance: # Normalize vector (stored vectors are normalized) nv = unitvec(v) candidates = [(x[0], x[1], self.distance.distance(x[0], nv)) for x ...

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def to_dict(self): """Return a dictionary representation of the error. :return: A dict with the keys: - attr: Attribute which contains the error, or "<root>" if it refers to the schema root. - errors: A list of dictionary representations of the errors. """ def ex...

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def _ReadLabels(self, artifact_definition_values, artifact_definition, name): """Reads the optional artifact definition labels. Args: artifact_definition_values (dict[str, object]): artifact definition values. artifact_definition (ArtifactDefinition): an artifact definition. name (s...

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def sms(self, message, to=None, from_=None, action=None, method=None, status_callback=None, **kwargs): """ Create a <Sms> element :param message: Message body :param to: Number to send message to :param from: Number to send message from :param action: Action ...

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def coordinate_reproject(x, y, s_crs, t_crs): """ reproject a coordinate from one CRS to another Parameters ---------- x: int or float the X coordinate component y: int or float the Y coordinate component s_crs: int, str or :osgeo:class:`osr.SpatialReference` the...

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def check_lazy_load_terreinobject(f): ''' Decorator function to lazy load a :class:`Terreinobject`. ''' def wrapper(*args): terreinobject = args[0] if ( terreinobject._centroid is None or terreinobject._bounding_box is None or terreinobject._metadata i...

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def feature_burstness(corpus, featureset_name, feature, k=5, normalize=True, s=1.1, gamma=1., **slice_kwargs): """ Estimate burstness profile for a feature over the ``'date'`` axis. Parameters ---------- corpus : :class:`.Corpus` feature : str Name of featureset in...

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def dispatch(self, *args, **kwargs): ''' Entry point for this class, here we decide basic stuff ''' # Get if this class is working as only a base render and List funcionality shouldn't be enabled onlybase = getattr(self, "onlybase", False) # REST not available when only...

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def print(*args, **kwargs): """ Normally print function in python prints values to a stream / stdout >> print(value1, value2, sep='', end='\n', file=sys.stdout) Current package usage: ====================== print(value1, value2, sep='', end='\n', file=sys.stdout, color=None, bg_color=None, ...

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def is_answer_available(self, assessment_section_id, item_id): """Tests if an answer is available for the given item. arg: assessment_section_id (osid.id.Id): ``Id`` of the ``AssessmentSection`` arg: item_id (osid.id.Id): ``Id`` of the ``Item`` return: (boolean) - ...

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def extract_ast_species(ast): """Extract species from ast.species set of tuples (id, label)""" species_id = "None" species_label = "None" species = [ (species_id, species_label) for (species_id, species_label) in ast.species if species_id ] if len(species) == 1: (species_id, sp...

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def get_books_containing_page(cursor, uuid, version, context_uuid=None, context_version=None): """Return a list of book names and UUIDs that contain a given module UUID.""" with db_connect() as db_connection: # Uses a RealDictCursor instead of the regular cursor ...

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def push(remote='origin', branch='master'): """git push commit""" print(cyan("Pulling changes from repo ( %s / %s)..." % (remote, branch))) local("git push %s %s" % (remote, branch))

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def quaternion_about_axis(angle, axis): """Return quaternion for rotation about axis. >>> q = quaternion_about_axis(0.123, [1, 0, 0]) >>> np.allclose(q, [0.99810947, 0.06146124, 0, 0]) True """ q = np.array([0.0, axis[0], axis[1], axis[2]]) qlen = vector_norm(q) if qlen > _EPS: ...

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def get_backlog_configurations(self, team_context): """GetBacklogConfigurations. Gets backlog configuration for a team :param :class:`<TeamContext> <azure.devops.v5_0.work.models.TeamContext>` team_context: The team context for the operation :rtype: :class:`<BacklogConfiguration> <azure....

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def form_valid(self, form): # lb = SalesLines.objects.filter(pk=self.__line_pk).first() # product_old = lb.product_final product_pk = self.request.POST.get("product_final", None) quantity = self.request.POST.get("quantity", None) product_final = ProductFinal.objects.filter(pk=pr...

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def _isub(self, other): """Discard the elements of other from self. if isinstance(it, _basebag): This runs in O(it.num_unique_elements()) else: This runs in O(len(it)) """ if isinstance(other, _basebag): for elem, other_count in other.counts(): try: self._increment_count(elem, -other_count)...

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def stats(self, name, value): """ Calculates min/average/max statistics based on the current and previous values. :param name: a counter name of Statistics type :param value: a value to update statistics """ counter = self.get(name, CounterType.Statistics) self....

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def hashes_above(path, line_number): """Yield hashes from contiguous comment lines before line ``line_number``. """ def hash_lists(path): """Yield lists of hashes appearing between non-comment lines. The lists will be in order of appearance and, for each non-empty list, their place...

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def _ExtractGoogleDocsSearchQuery(self, url): """Extracts a search query from a Google docs URL. Google Docs: https://docs.google.com/.*/u/0/?q=query Args: url (str): URL. Returns: str: search query or None if no query was found. """ if 'q=' not in url: return None lin...

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def magic_api(word): """ This is our magic API that we're simulating. It'll return a random number and a cache timer. """ result = sum(ord(x)-65 + randint(1,50) for x in word) delta = timedelta(seconds=result) cached_until = datetime.now() + delta return result, cached_until

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def _make_stream_transport(self): """Create an AdbStreamTransport with a newly allocated local_id.""" msg_queue = queue.Queue() with self._stream_transport_map_lock: # Start one past the last id we used, and grab the first available one. # This mimics the ADB behavior of 'increment an unsigned a...

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def inject(self, inst, **renames): """Injects dependencies and propagates dependency injector""" if renames: di = self.clone(**renames) else: di = self pro = di._provides inst.__injections_source__ = di deps = getattr(inst, '__injections__', None) ...

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def transform_regex_replace(source, pattern, rewrite, name=None): """Replace all substrings from `needle` to corresponding strings in `haystack` with source. Args: source: `Tensor` or `SparseTensor` of any shape, source strings for replacing. pattern: List of RE2 patterns to search in source ...

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def f1_score(df, col_true=None, col_pred='precision_result', pos_label=1, average=None): r""" Compute f-1 score of a predicted DataFrame. f-1 is defined as .. math:: \frac{2 \cdot precision \cdot recall}{precision + recall} :Parameters: - **df** - predicted data frame - **col...

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def sliding_window(image, step_size, window_size, mask=None, only_whole=True): """ Creates generator of sliding windows. :param image: input image :param step_size: number of pixels we are going to skip in both the (x, y) direction :param window_size: the width and height of the window we are going ...

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def create_textview(self, wrap_mode=Gtk.WrapMode.WORD_CHAR, justify=Gtk.Justification.LEFT, visible=True, editable=True): """ Function creates a text view with wrap_mode and justification """ text_view = Gtk.TextView() text_view.set_wrap_mode(wrap_mode) text_view....

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def json_worker(self, mask, cache_id=None, cache_method="string", cache_section="www"): """A function annotation that adds a worker request. A worker request is a POST request that is computed asynchronously. That is, the actual task is performed in a different thread a...

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def kill_all(self, bIgnoreExceptions = False): """ Kills from all processes currently being debugged. @type bIgnoreExceptions: bool @param bIgnoreExceptions: C{True} to ignore any exceptions that may be raised when killing each process. C{False} to stop and raise an ...

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41.642857

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def _fetch_langs(): """Fetch (scrape) languages from Google Translate. Google Translate loads a JavaScript Array of 'languages codes' that can be spoken. We intersect this list with all the languages Google Translate provides to get the ones that support text-to-speech. Returns: dict: A di...

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def clear(self): """ Clear the cache. """ not_removed = [] for fn in os.listdir(self.base): fn = os.path.join(self.base, fn) try: if os.path.islink(fn) or os.path.isfile(fn): os.remove(fn) elif os.path.is...

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def _compose_range(pattern, rule, fill=2): """oc._compose_range('Week', 'Week04-Week09', fill=2) - hash a range. This takes apart a range of times and returns a dictionary of all intervening values appropriately set. The fill value is used to format the time numbers. """ keys = [] mask = l...

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def get_new_driver(self, browser=None, headless=None, servername=None, port=None, proxy=None, agent=None, switch_to=True, cap_file=None, disable_csp=None): """ This method spins up an extra browser for tests that require more than one. The first browser ...

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def request(self, method, url, params=None, data=None, headers=None, auth=None, timeout=None, allow_redirects=False): """ Make an HTTP Request with parameters provided. :param str method: The HTTP method to use :param str url: The URL to request :param dict param...

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def extract_objects(self, fname, type_filter=None): '''Extract objects from a source file Args: fname(str): Name of file to read from type_filter (class, optional): Object class to filter results Returns: List of objects extracted from the file. ''' objects = [] if fname in se...

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def renegotiate(self): """ Renegotiate the session. :return: True if the renegotiation can be started, False otherwise :rtype: bool """ if not self.renegotiate_pending(): _openssl_assert(_lib.SSL_renegotiate(self._ssl) == 1) return True re...

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def changelist_view(self, request, extra_context=None): """ Redirect to the changelist view for subclasses. """ if self.model is not self.concrete_model: return HttpResponseRedirect( admin_url(self.concrete_model, "changelist")) extra_context = extra_context or {} ...

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def get_chunk_hash(file, seed, filesz=None, chunksz=DEFAULT_CHUNK_SIZE, bufsz=DEFAULT_BUFFER_SIZE): """returns a hash of a chunk of the file provided. the position of the chunk is determined by the seed. additi...

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def _get_column_type(self,column): """ Return 'numeric' if the column is of type integer or real, otherwise return 'string'. """ ctype = column.GetType() if ctype in [ogr.OFTInteger, ogr.OFTReal]: return 'numeric' else: return 'string'

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36.5

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def accumulate(iterable): " Return series of accumulated sums. " iterator = iter(iterable) sum_data = next(iterator) yield sum_data for el in iterator: sum_data += el yield sum_data

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24

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def from_string(cls, string, *, default_func=None): '''Construct a Service from a string. If default_func is provided and any ServicePart is missing, it is called with default_func(protocol, part) to obtain the missing part. ''' if not isinstance(string, str): raise ...

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def qos_queue_scheduler_strict_priority_dwrr_traffic_class6(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") qos = ET.SubElement(config, "qos", xmlns="urn:brocade.com:mgmt:brocade-qos") queue = ET.SubElement(qos, "queue") scheduler = ET.SubElement...

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def post(self, url, data=None, **kwargs): """Sends a POST request. Returns :class:`Response` object. :param url: URL for the new :class:`Request` object. :param data: (optional) Dictionary or bytes to send in the body of the :class:`Request`. :param **kwargs: Optional arguments that ``r...

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def normalize_value(value, snake_case=True): """ :param value: :return value: """ if not isinstance(value, six.string_types): raise TypeError("the value passed to value must be a string") if snake_case: s1 = first_cap_re.sub(r'\1_\2', value) new_value = all_cap_re.sub(r'...

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def render_widget(self, request, widget_id): '''Returns rendered widget in JSON response''' widget = get_widget_from_id(widget_id) response = widget.render(**{'request': request}) return JsonResponse({'result': response, 'id': widget_id})

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def write_config(configuration): """Helper to write the JSON configuration to a file""" with open(CONFIG_PATH, 'w') as f: json.dump(configuration, f, indent=2, sort_keys=True)

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def connection_lost(self, reason): """Protocols connection lost handler. """ LOG.info( 'Connection to peer %s lost, reason: %s Resetting ' 'retry connect loop: %s' % (self._neigh_conf.ip_address, reason, self._connect_retry_event.is_set()), ...

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def partial_derivative(self, X, y=0): """Compute partial derivative :math:`C(u|v)` of cumulative density. Args: X: `np.ndarray` y: `float` Returns: """ self.check_fit() U, V = self.split_matrix(X) if self.theta == 1: return...

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def free(**kwargs): ''' Stop synchronization of directory. ''' output, err = cli_syncthing_adapter.free(kwargs['path']) click.echo("%s" % output, err=err)

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def authenticate(username, password): """ Returns: a dict with: pk: the pk of the user token: dict containing all the data from the api (access_token, refresh_token, expires_at etc.) user_data: dict containing user data such as first_na...

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def marshal_with(self, schema, envelope=None): """ A decorator that apply marshalling to the return values of your methods. :param schema: The schema class to be used to serialize the values. :param envelope: The key used to envelope the data. :return: A function. """ ...

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def _execute(self, source, hidden): """ Execute 'source'. If 'hidden', do not show any output. See parent class :meth:`execute` docstring for full details. """ msg_id = self.kernel_manager.shell_channel.execute(source, hidden) self._request_info['execute'][msg_id] = self._Execut...

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def unionIntoArray(self, inputVector, outputVector, forceOutput=False): """ Create a union of the inputVector and copy the result into the outputVector Parameters: ---------------------------- @param inputVector: The inputVector can be either a full numpy array containing 0's...

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40.275

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def exons(self, contig=None, strand=None): """ Create exon object for all exons in the database, optionally restrict to a particular chromosome using the `contig` argument. """ # DataFrame with single column called "exon_id" exon_ids = self.exon_ids(contig=contig, strand=...

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def disable_logger(logger_name: str, propagate: bool = False): """Disable output for the logger of the specified name.""" log = logging.getLogger(logger_name) log.propagate = propagate for handler in log.handlers: log.removeHandler(handler)

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def get_all_values_of_all_params(self): """ Return a dictionary containing all values that are taken by all available parameters. Always returns the parameter list in alphabetical order. """ values = collections.OrderedDict([[p, []] for p in ...

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35

19.833333

def birthdays_subcommand(vcard_list, parsable): """Print birthday contact table. :param vcard_list: the vcards to search for matching entries which should be printed :type vcard_list: list of carddav_object.CarddavObject :param parsable: machine readable output: columns devided by tabulator (\t...

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def start_blocking(self): """ Start the advertiser in the background, but wait until it is ready """ self._cav_started.clear() self.start() self._cav_started.wait()

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32

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def parse_unit(expression): """Evaluate a python expression string containing constants Argument: | ``expression`` -- A string containing a numerical expressions including unit conversions. In addition to the variables in this module, also the following ...

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def acknowledge_svc_problem(self, service, sticky, notify, author, comment): """Acknowledge a service problem Format of the line that triggers function call:: ACKNOWLEDGE_SVC_PROBLEM;<host_name>;<service_description>;<sticky>;<notify>; <persistent:obsolete>;<author>;<comment> :...

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def final_spin_from_f0_tau(f0, tau, l=2, m=2): """Returns the final spin based on the given frequency and damping time. .. note:: Currently, only l = m = 2 is supported. Any other indices will raise a ``KeyError``. Parameters ---------- f0 : float or array Frequency of the ...

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30.119048

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def addSubparser(subparsers, subcommand, description): """ Add a subparser with subcommand to the subparsers object """ parser = subparsers.add_parser( subcommand, description=description, help=description) return parser

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34.571429

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def create_namespaced_cron_job(self, namespace, body, **kwargs): """ create a CronJob This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.create_namespaced_cron_job(namespace, body, async_req=T...

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def make_qemu_dirs(max_qemu_id, output_dir, topology_name): """ Create Qemu VM working directories if required :param int max_qemu_id: Number of directories to create :param str output_dir: Output directory :param str topology_name: Topology name """ if max_qemu_id is not None: for ...

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def section(self, section, skip=['type', 'order']): """ Return section items, skip selected (type/order by default) """ return [(key, val) for key, val in self.parser.items(section) if key not in skip]

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57.5

11.25

def parse_info(wininfo_name, egginfo_name): """Extract metadata from filenames. Extracts the 4 metadataitems needed (name, version, pyversion, arch) from the installer filename and the name of the egg-info directory embedded in the zipfile (if any). The egginfo filename has the format:: ...

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def connect_cloudformation(aws_access_key_id=None, aws_secret_access_key=None, **kwargs): """ :type aws_access_key_id: string :param aws_access_key_id: Your AWS Access Key ID :type aws_secret_access_key: string :param aws_secret_access_key: Your AWS Secret Access Key :rtype: :class:`boto.cloud...

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def _auth_headers(self): """Headers required to authenticate a request. Assumes your ``Context`` already has a authentication token, either provided explicitly or obtained by logging into the Splunk instance. :returns: A list of 2-tuples containing key and value """ ...

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