kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def _close_connection(self, frame_in): """Connection Close. :param specification.Connection.Close frame_in: Amqp frame. :return: """ self._set_connection_state(Stateful.CLOSED) if frame_in.reply_code != 200: reply_text = try_utf8_decode(frame_in.reply_text) ...	[ "def", "_close_connection", "(", "self", ",", "frame_in", ")", ":", "self", ".", "_set_connection_state", "(", "Stateful", ".", "CLOSED", ")", "if", "frame_in", ".", "reply_code", "!=", "200", ":", "reply_text", "=", "try_utf8_decode", "(", "frame_in", ".", ...	40.2	17.866667
async def abort(self): """Abort current group session.""" state = await self.state() res = await self.call("X_Abort", MasterSessionID=state.MasterSessionID) return res	[ "async", "def", "abort", "(", "self", ")", ":", "state", "=", "await", "self", ".", "state", "(", ")", "res", "=", "await", "self", ".", "call", "(", "\"X_Abort\"", ",", "MasterSessionID", "=", "state", ".", "MasterSessionID", ")", "return", "res" ]	39	17
def from_soup(self,author,soup): """ Factory Pattern. Fetches contact data from given soup and builds the object """ email = soup.find('span',class_='icon icon-mail').findParent('a').get('href').split(':')[-1] if soup.find('span',class_='icon icon-mail') else '' facebook = soup.find('span',class_='icon ico...	[ "def", "from_soup", "(", "self", ",", "author", ",", "soup", ")", ":", "email", "=", "soup", ".", "find", "(", "'span'", ",", "class_", "=", "'icon icon-mail'", ")", ".", "findParent", "(", "'a'", ")", ".", "get", "(", "'href'", ")", ".", "split", ...	81.333333	50.777778
def metadata_response(self, request, full_url, headers): """ Mock response for localhost metadata http://docs.aws.amazon.com/AWSEC2/latest/UserGuide/AESDG-chapter-instancedata.html """ parsed_url = urlparse(full_url) tomorrow = datetime.datetime.utcnow() + datetime.time...	[ "def", "metadata_response", "(", "self", ",", "request", ",", "full_url", ",", "headers", ")", ":", "parsed_url", "=", "urlparse", "(", "full_url", ")", "tomorrow", "=", "datetime", ".", "datetime", ".", "utcnow", "(", ")", "+", "datetime", ".", "timedelta...	34.076923	16.282051
def connect(self): """Connect the \|LinkSequence\| instances handled by the actual model to the \|NodeSequence\| instances handled by one inlet node and multiple oulet nodes. The HydPy-H-Branch model passes multiple output values to different outlet nodes. This requires additional ...	[ "def", "connect", "(", "self", ")", ":", "nodes", "=", "self", ".", "element", ".", "inlets", "total", "=", "self", ".", "sequences", ".", "inlets", ".", "total", "if", "total", ".", "shape", "!=", "(", "len", "(", "nodes", ")", ",", ")", ":", "t...	41.652174	19.275362
def create_row_to_some_id_col_mapping(id_array): """ Parameters ---------- id_array : 1D ndarray. All elements of the array should be ints representing some id related to the corresponding row. Returns ------- rows_to_ids : 2D scipy sparse array. Will map each row of...	[ "def", "create_row_to_some_id_col_mapping", "(", "id_array", ")", ":", "# Get the unique ids, in their original order of appearance", "original_order_unique_ids", "=", "get_original_order_unique_ids", "(", "id_array", ")", "# Create a matrix with the same number of rows as id_array but a s...	40.461538	23.076923
def get_ids_by_expression(self, expression, threshold=0.001, func=np.sum): """ Use a PEG to parse expression and return study IDs.""" lexer = lp.Lexer() lexer.build() parser = lp.Parser( lexer, self.dataset, threshold=threshold, func=func) parser.build() retur...	[ "def", "get_ids_by_expression", "(", "self", ",", "expression", ",", "threshold", "=", "0.001", ",", "func", "=", "np", ".", "sum", ")", ":", "lexer", "=", "lp", ".", "Lexer", "(", ")", "lexer", ".", "build", "(", ")", "parser", "=", "lp", ".", "Pa...	44.125	16.875
def add_management_certificate(kwargs=None, conn=None, call=None): ''' .. versionadded:: 2015.8.0 Add a new management certificate CLI Example: .. code-block:: bash salt-cloud -f add_management_certificate my-azure public_key='...PUBKEY...' \\ thumbprint=0123456789ABCDEF data...	[ "def", "add_management_certificate", "(", "kwargs", "=", "None", ",", "conn", "=", "None", ",", "call", "=", "None", ")", ":", "if", "call", "!=", "'function'", ":", "raise", "SaltCloudSystemExit", "(", "'The add_management_certificate function must be called with -f ...	31.093023	27.139535
def get_sudoers_entry(username=None, sudoers_entries=None): """ Find the sudoers entry in the sudoers file for the specified user. args: username (str): username. sudoers_entries (list): list of lines from the sudoers file. returns:`r str: sudoers entry for the specified user. ...	[ "def", "get_sudoers_entry", "(", "username", "=", "None", ",", "sudoers_entries", "=", "None", ")", ":", "for", "entry", "in", "sudoers_entries", ":", "if", "entry", ".", "startswith", "(", "username", ")", ":", "return", "entry", ".", "replace", "(", "use...	33.769231	17.230769
def revoke_sudo_privileges(request): """ Revoke sudo privileges from a request explicitly """ request._sudo = False if COOKIE_NAME in request.session: del request.session[COOKIE_NAME]	[ "def", "revoke_sudo_privileges", "(", "request", ")", ":", "request", ".", "_sudo", "=", "False", "if", "COOKIE_NAME", "in", "request", ".", "session", ":", "del", "request", ".", "session", "[", "COOKIE_NAME", "]" ]	29.285714	4.714286
def verify_otp(request): """ Verify a OTP request """ ctx = {} if request.method == "POST": verification_code = request.POST.get('verification_code') if verification_code is None: ctx['error_message'] = "Missing verification code." else: otp_ = UserO...	[ "def", "verify_otp", "(", "request", ")", ":", "ctx", "=", "{", "}", "if", "request", ".", "method", "==", "\"POST\"", ":", "verification_code", "=", "request", ".", "POST", ".", "get", "(", "'verification_code'", ")", "if", "verification_code", "is", "Non...	35.48	23
def list(self, prefix='', delimiter=None): """Limits a list of Bucket's objects based on prefix and delimiter.""" return self.service._list( bucket=self.name, prefix=prefix, delimiter=delimiter, objects=True )	[ "def", "list", "(", "self", ",", "prefix", "=", "''", ",", "delimiter", "=", "None", ")", ":", "return", "self", ".", "service", ".", "_list", "(", "bucket", "=", "self", ".", "name", ",", "prefix", "=", "prefix", ",", "delimiter", "=", "delimiter", ...	48.2	15.4
def update_data(self): """ Returns data for all users including shared data files. """ url = ('https://www.openhumans.org/api/direct-sharing/project/' 'members/?access_token={}'.format(self.master_access_token)) results = get_all_results(url) self.project_d...	[ "def", "update_data", "(", "self", ")", ":", "url", "=", "(", "'https://www.openhumans.org/api/direct-sharing/project/'", "'members/?access_token={}'", ".", "format", "(", "self", ".", "master_access_token", ")", ")", "results", "=", "get_all_results", "(", "url", ")"...	47.263158	15.578947
def distill_model_event(instance, model, action, user_override=None): """ Take created, updated and deleted actions for built-in app/model mappings, convert to the defined event.name and let hooks fly. If that model isn't represented, we just quit silenty. """ from rest_hooks.models import ...	[ "def", "distill_model_event", "(", "instance", ",", "model", ",", "action", ",", "user_override", "=", "None", ")", ":", "from", "rest_hooks", ".", "models", "import", "HOOK_EVENTS", "event_name", "=", "None", "for", "maybe_event_name", ",", "auto", "in", "HOO...	38.038462	16.576923
def ReadOffer(self, offer_link): """Reads an offer. :param str offer_link: The link to the offer. :return: The read Offer. :rtype: dict """ path = base.GetPathFromLink(offer_link) offer_id = base.GetResourceIdOrFullNameFromLi...	[ "def", "ReadOffer", "(", "self", ",", "offer_link", ")", ":", "path", "=", "base", ".", "GetPathFromLink", "(", "offer_link", ")", "offer_id", "=", "base", ".", "GetResourceIdOrFullNameFromLink", "(", "offer_link", ")", "return", "self", ".", "Read", "(", "p...	25.4	18.933333
def run(self, app_input, args, kwargs): """ Creates a new job that executes the function "main" of this app with the given input app_input*. See :meth:`dxpy.bindings.dxapplet.DXExecutable.run` for the available args. """ # Rename app_input to preserve API com...	[ "def", "run", "(", "self", ",", "app_input", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "# Rename app_input to preserve API compatibility when calling", "# DXApp.run(app_input=...).", "return", "super", "(", "DXApp", ",", "self", ")", ".", "run", "(", ...	39.545455	18.636364
def tocimxml(self): """ Return the CIM-XML representation of this CIM qualifier type, as an object of an appropriate subclass of :term:`Element`. The returned CIM-XML representation is a `QUALIFIER.DECLARATION` element consistent with :term:`DSP0201`. Returns: ...	[ "def", "tocimxml", "(", "self", ")", ":", "if", "self", ".", "value", "is", "None", ":", "value_xml", "=", "None", "elif", "isinstance", "(", "self", ".", "value", ",", "(", "tuple", ",", "list", ")", ")", ":", "array_xml", "=", "[", "]", "for", ...	40.571429	23.52381
def send(self, request, blocking=True): """Queue request for async network send, return Future()""" future = Future() if self.connecting(): return future.failure(Errors.NodeNotReadyError(str(self))) elif not self.connected(): return future.failure(Errors.KafkaConn...	[ "def", "send", "(", "self", ",", "request", ",", "blocking", "=", "True", ")", ":", "future", "=", "Future", "(", ")", "if", "self", ".", "connecting", "(", ")", ":", "return", "future", ".", "failure", "(", "Errors", ".", "NodeNotReadyError", "(", "...	50.4	14.7
def cli(ctx, feature_id, name, organism="", sequence=""): """Set a feature's name Output: A standard apollo feature dictionary ({"features": [{...}]}) """ return ctx.gi.annotations.set_name(feature_id, name, organism=organism, sequence=sequence)	[ "def", "cli", "(", "ctx", ",", "feature_id", ",", "name", ",", "organism", "=", "\"\"", ",", "sequence", "=", "\"\"", ")", ":", "return", "ctx", ".", "gi", ".", "annotations", ".", "set_name", "(", "feature_id", ",", "name", ",", "organism", "=", "or...	32	26
def dump(self, filename, encoding="utf8"): """ Dumps the ascii art in the file. Args: filename (str): File to dump the ascii art. encoding (str): Optional. Default "utf-8". """ with open(filename, mode='w', encoding=encoding) as text_file: text...	[ "def", "dump", "(", "self", ",", "filename", ",", "encoding", "=", "\"utf8\"", ")", ":", "with", "open", "(", "filename", ",", "mode", "=", "'w'", ",", "encoding", "=", "encoding", ")", "as", "text_file", ":", "text_file", ".", "write", "(", "self", ...	38.333333	10.777778
def make_process_header(self, slug, typ, version, source_uri, description, inputs): """Generate a process definition header. :param str slug: process' slug :param str typ: process' type :param str version: process' version :param str source_uri: url to the process definition ...	[ "def", "make_process_header", "(", "self", ",", "slug", ",", "typ", ",", "version", ",", "source_uri", ",", "description", ",", "inputs", ")", ":", "node", "=", "addnodes", ".", "desc", "(", ")", "signode", "=", "addnodes", ".", "desc_signature", "(", "s...	38.155556	23.066667
def genes_by_name(self, gene_name): """ Get all the unqiue genes with the given name (there might be multiple due to copies in the genome), return a list containing a Gene object for each distinct ID. """ gene_ids = self.gene_ids_of_gene_name(gene_name) return [se...	[ "def", "genes_by_name", "(", "self", ",", "gene_name", ")", ":", "gene_ids", "=", "self", ".", "gene_ids_of_gene_name", "(", "gene_name", ")", "return", "[", "self", ".", "gene_by_id", "(", "gene_id", ")", "for", "gene_id", "in", "gene_ids", "]" ]	45	16.25
def help_center_article_subscriptions(self, article_id, locale=None, **kwargs): "https://developer.zendesk.com/rest_api/docs/help_center/subscriptions#list-article-subscriptions" api_path = "/api/v2/help_center/articles/{article_id}/subscriptions.json" api_path = api_path.format(article_id=artic...	[ "def", "help_center_article_subscriptions", "(", "self", ",", "article_id", ",", "locale", "=", "None", ",", "", "", "kwargs", ")", ":", "api_path", "=", "\"/api/v2/help_center/articles/{article_id}/subscriptions.json\"", "api_path", "=", "api_path", ".", "format", ...	70.375	35.875
def namespaces(self): """Instance depends on the API version: * 2015-08-01: :class:`NamespacesOperations<azure.mgmt.eventhub.v2015_08_01.operations.NamespacesOperations>` * 2017-04-01: :class:`NamespacesOperations<azure.mgmt.eventhub.v2017_04_01.operations.NamespacesOperations>` ...	[ "def", "namespaces", "(", "self", ")", ":", "api_version", "=", "self", ".", "_get_api_version", "(", "'namespaces'", ")", "if", "api_version", "==", "'2015-08-01'", ":", "from", ".", "v2015_08_01", ".", "operations", "import", "NamespacesOperations", "as", "Ope...	67.882353	39.411765
def to_buffer(f): """ Decorator converting all strings and iterators/iterables into Buffers. """ @functools.wraps(f) def wrap(args, *kwargs): iterator = kwargs.get('iterator', args[0]) if not isinstance(iterator, Buffer): iterator = Buffer(iterator) return f(ite...	[ "def", "to_buffer", "(", "f", ")", ":", "@", "functools", ".", "wraps", "(", "f", ")", "def", "wrap", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "iterator", "=", "kwargs", ".", "get", "(", "'iterator'", ",", "args", "[", "0", "]", ")"...	32.090909	11.909091
def IsWalletTransaction(self, tx): """ Verifies if a transaction belongs to the wallet. Args: tx (TransactionOutput):an instance of type neo.Core.TX.Transaction.TransactionOutput to verify. Returns: bool: True, if transaction belongs to wallet. False, if not. ...	[ "def", "IsWalletTransaction", "(", "self", ",", "tx", ")", ":", "for", "key", ",", "contract", "in", "self", ".", "_contracts", ".", "items", "(", ")", ":", "for", "output", "in", "tx", ".", "outputs", ":", "if", "output", ".", "ScriptHash", ".", "To...	34.741935	22.483871
def get_activity_stream(self, before=None): """ Get user's activity stream from ``https://www.duolingo.com/stream/<user_id>?before=<date> if before date is given or else ``https://www.duolingo.com/activity/<user_id>`` :param before: Datetime in format '2015-07-06 05:42:2...	[ "def", "get_activity_stream", "(", "self", ",", "before", "=", "None", ")", ":", "if", "before", ":", "url", "=", "\"https://www.duolingo.com/stream/{}?before={}\"", "url", "=", "url", ".", "format", "(", "self", ".", "user_data", ".", "id", ",", "before", "...	35.5	16.227273
def get_independent_nodes(dag): """Get a list of all node in the graph with no dependencies.""" nodes = set(dag.keys()) dependent_nodes = set([node for downstream_nodes in dag.values() for node in downstream_nodes]) return set(nodes - dependent_nodes)	[ "def", "get_independent_nodes", "(", "dag", ")", ":", "nodes", "=", "set", "(", "dag", ".", "keys", "(", ")", ")", "dependent_nodes", "=", "set", "(", "[", "node", "for", "downstream_nodes", "in", "dag", ".", "values", "(", ")", "for", "node", "in", ...	52.6	16.4
def set_upper_lower_bands(self,e_lower,e_upper): """ Set fake upper/lower bands, useful to set the same energy range in the spin up/down bands when calculating the DOS """ lower_band = e_lowernp.ones((1,self.ebands.shape[1])) upper_band = e_uppernp.ones((1,self....	[ "def", "set_upper_lower_bands", "(", "self", ",", "e_lower", ",", "e_upper", ")", ":", "lower_band", "=", "e_lower", "*", "np", ".", "ones", "(", "(", "1", ",", "self", ".", "ebands", ".", "shape", "[", "1", "]", ")", ")", "upper_band", "=", "e_upper...	47.153846	17.769231
def _apply_tracing(self, handler, attributes): """ Helper function to avoid rewriting for middleware and decorator. Returns a new span from the request with logged attributes and correct operation name from the func. """ operation_name = self._get_operation_name(handler) ...	[ "def", "_apply_tracing", "(", "self", ",", "handler", ",", "attributes", ")", ":", "operation_name", "=", "self", ".", "_get_operation_name", "(", "handler", ")", "headers", "=", "handler", ".", "request", ".", "headers", "request", "=", "handler", ".", "req...	39.769231	18.128205
def _get_pool_results(args, *kwargs): ''' A helper function which returns a dictionary of minion pools along with their matching result sets. Useful for developing other "survey style" functions. Optionally accepts a "survey_sort=up" or "survey_sort=down" kwargs for specifying sort order. ...	[ "def", "_get_pool_results", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "# TODO: the option \"survey.sort=\" would be preferred for namespace", "# separation but the kwargs parser for the salt-run command seems to", "# improperly pass the options containing a \".\" in them for lat...	36.462963	25.944444
def print_genome_matrix(hits, fastas, id2desc, file_name): """ optimize later? slow ... should combine with calculate_threshold module """ out = open(file_name, 'w') fastas = sorted(fastas) print('## percent identity between genomes', file=out) print('# - \t %s' % ('\t'.join(fastas)), fi...	[ "def", "print_genome_matrix", "(", "hits", ",", "fastas", ",", "id2desc", ",", "file_name", ")", ":", "out", "=", "open", "(", "file_name", ",", "'w'", ")", "fastas", "=", "sorted", "(", "fastas", ")", "print", "(", "'## percent identity between genomes'", "...	38.03125	14.96875
def comparator(self, x, y): ''' simple comparator method ''' indX=0 indY=0 for i in range(len(self.stable_names)): if self.stable_names[i] == x[0].split('-')[0]: indX=i if self.stable_names[i] == y[0].split('-')[0]: ...	[ "def", "comparator", "(", "self", ",", "x", ",", "y", ")", ":", "indX", "=", "0", "indY", "=", "0", "for", "i", "in", "range", "(", "len", "(", "self", ".", "stable_names", ")", ")", ":", "if", "self", ".", "stable_names", "[", "i", "]", "==", ...	22.05	22.25
def new_dotdot(self, vd, parent, seqnum, rock_ridge, log_block_size, rr_relocated_parent, xa, file_mode): # type: (headervd.PrimaryOrSupplementaryVD, DirectoryRecord, int, str, int, bool, bool, int) -> None ''' Create a new 'dotdot' Directory Record. Parameters: ...	[ "def", "new_dotdot", "(", "self", ",", "vd", ",", "parent", ",", "seqnum", ",", "rock_ridge", ",", "log_block_size", ",", "rr_relocated_parent", ",", "xa", ",", "file_mode", ")", ":", "# type: (headervd.PrimaryOrSupplementaryVD, DirectoryRecord, int, str, int, bool, bool,...	48.791667	28.375
def log(logger, level, message): """Logs message to stderr if logging isn't initialized.""" if logger.parent.name != 'root': logger.log(level, message) else: print(message, file=sys.stderr)	[ "def", "log", "(", "logger", ",", "level", ",", "message", ")", ":", "if", "logger", ".", "parent", ".", "name", "!=", "'root'", ":", "logger", ".", "log", "(", "level", ",", "message", ")", "else", ":", "print", "(", "message", ",", "file", "=", ...	30.285714	12.857143
def is_multisig_address(addr, blockchain='bitcoin', blockchain_opts): """ Is the given address a multisig address? """ if blockchain == 'bitcoin': return btc_is_multisig_address(addr, blockchain_opts) else: raise ValueError('Unknown blockchain "{}"'.format(blockchain))	[ "def", "is_multisig_address", "(", "addr", ",", "blockchain", "=", "'bitcoin'", ",", "", "", "blockchain_opts", ")", ":", "if", "blockchain", "==", "'bitcoin'", ":", "return", "btc_is_multisig_address", "(", "addr", ",", "", "", "blockchain_opts", ")", "el...	37.75	16
def logout(): """ Log out the active user """ flogin.logout_user() next = flask.request.args.get('next') return flask.redirect(next or flask.url_for("user"))	[ "def", "logout", "(", ")", ":", "flogin", ".", "logout_user", "(", ")", "next", "=", "flask", ".", "request", ".", "args", ".", "get", "(", "'next'", ")", "return", "flask", ".", "redirect", "(", "next", "or", "flask", ".", "url_for", "(", "\"user\""...	28.666667	10
def version(context=None): ''' Attempts to run systemctl --version. Returns None if unable to determine version. ''' contextkey = 'salt.utils.systemd.version' if isinstance(context, dict): # Can't put this if block on the same line as the above if block, # because it will break t...	[ "def", "version", "(", "context", "=", "None", ")", ":", "contextkey", "=", "'salt.utils.systemd.version'", "if", "isinstance", "(", "context", ",", "dict", ")", ":", "# Can't put this if block on the same line as the above if block,", "# because it will break the elif below....	35.34375	20.09375
def writerow(self, cells): """ Write a row of cells into the default sheet of the spreadsheet. :param cells: A list of cells (most basic Python types supported). :return: Nothing. """ if self.default_sheet is None: self.default_sheet = self.new_sheet() ...	[ "def", "writerow", "(", "self", ",", "cells", ")", ":", "if", "self", ".", "default_sheet", "is", "None", ":", "self", ".", "default_sheet", "=", "self", ".", "new_sheet", "(", ")", "self", ".", "default_sheet", ".", "writerow", "(", "cells", ")" ]	38.555556	11.888889
def unregister_path(self, path): """ Unregisters given path. :param path: Path name. :type path: unicode :return: Method success. :rtype: bool """ if not path in self: raise umbra.exceptions.PathExistsError("{0} \| '{1}' path isn't registered!...	[ "def", "unregister_path", "(", "self", ",", "path", ")", ":", "if", "not", "path", "in", "self", ":", "raise", "umbra", ".", "exceptions", ".", "PathExistsError", "(", "\"{0} \| '{1}' path isn't registered!\"", ".", "format", "(", "self", ".", "__class__", ".",...	26	18.125
def unregister(self): '''Remove this worker from the list of available workers. This requires the worker to already have been :meth:`register()`. ''' self.task_master.worker_unregister(self.worker_id) self.task_master.worker_id = None self.worker_id = None	[ "def", "unregister", "(", "self", ")", ":", "self", ".", "task_master", ".", "worker_unregister", "(", "self", ".", "worker_id", ")", "self", ".", "task_master", ".", "worker_id", "=", "None", "self", ".", "worker_id", "=", "None" ]	33.222222	23.888889
def batch_work(self): """ Method to be executed in batch mode for collecting the required fragment (composite) and then other custom tasks. :return: """ while True: gen = collect_fragment(self._stop_event, self.config['AGORA']) for collector, (t, ...	[ "def", "batch_work", "(", "self", ")", ":", "while", "True", ":", "gen", "=", "collect_fragment", "(", "self", ".", "_stop_event", ",", "self", ".", "config", "[", "'AGORA'", "]", ")", "for", "collector", ",", "(", "t", ",", "s", ",", "p", ",", "o"...	36.352941	16.117647
def helpful_error_list_get(lst, index): """ >>> helpful_error_list_get([1, 2, 3], 1) 2 >>> helpful_error_list_get([1, 2, 3], 4) Traceback (most recent call last): ... IndexError: Tried to access 4, length is only 3 """ try: return lst[index] except IndexError: rai...	[ "def", "helpful_error_list_get", "(", "lst", ",", "index", ")", ":", "try", ":", "return", "lst", "[", "index", "]", "except", "IndexError", ":", "raise", "IndexError", "(", "'Tried to access %r, length is only %r'", "%", "(", "index", ",", "len", "(", "lst", ...	29.384615	15.384615
def n_lfom_rows(FLOW,HL_LFOM): """This equation states that the open area corresponding to one row can be set equal to two orifices of diameter=row height. If there are more than two orifices per row at the top of the LFOM then there are more orifices than are convenient to drill and more than necessary...	[ "def", "n_lfom_rows", "(", "FLOW", ",", "HL_LFOM", ")", ":", "N_estimated", "=", "(", "HL_LFOM", "", "np", ".", "pi", "/", "(", "2", "", "width_stout", "(", "HL_LFOM", ",", "HL_LFOM", ")", "*", "FLOW", ")", ")", "variablerow", "=", "min", "(", "1...	50.692308	24.346154
def save_module(self, obj): """ Save a module as an import """ self.modules.add(obj) self.save_reduce(subimport, (obj.__name__,), obj=obj)	[ "def", "save_module", "(", "self", ",", "obj", ")", ":", "self", ".", "modules", ".", "add", "(", "obj", ")", "self", ".", "save_reduce", "(", "subimport", ",", "(", "obj", ".", "__name__", ",", ")", ",", "obj", "=", "obj", ")" ]	25.5	9.166667
def requester( url, main_url=None, delay=0, cook=None, headers=None, timeout=10, host=None, proxies=[None], user_agents=[None], failed=None, processed=None ): """Handle the requests and return the response body.""" cook ...	[ "def", "requester", "(", "url", ",", "main_url", "=", "None", ",", "delay", "=", "0", ",", "cook", "=", "None", ",", "headers", "=", "None", ",", "timeout", "=", "10", ",", "host", "=", "None", ",", "proxies", "=", "[", "None", "]", ",", "user_ag...	28.66129	15.887097
def loss_maps(curves, conditional_loss_poes): """ :param curves: an array of loss curves :param conditional_loss_poes: a list of conditional loss poes :returns: a composite array of loss maps with the same shape """ loss_maps_dt = numpy.dtype([('poe-%s' % poe, F32) ...	[ "def", "loss_maps", "(", "curves", ",", "conditional_loss_poes", ")", ":", "loss_maps_dt", "=", "numpy", ".", "dtype", "(", "[", "(", "'poe-%s'", "%", "poe", ",", "F32", ")", "for", "poe", "in", "conditional_loss_poes", "]", ")", "loss_maps", "=", "numpy",...	45.214286	12.785714
def is_mdgel(self): """File has MD Gel format.""" # TODO: this likely reads the second page from file try: ismdgel = self.pages[0].is_mdgel or self.pages[1].is_mdgel if ismdgel: self.is_uniform = False return ismdgel except IndexError: ...	[ "def", "is_mdgel", "(", "self", ")", ":", "# TODO: this likely reads the second page from file", "try", ":", "ismdgel", "=", "self", ".", "pages", "[", "0", "]", ".", "is_mdgel", "or", "self", ".", "pages", "[", "1", "]", ".", "is_mdgel", "if", "ismdgel", ...	33.5	16
async def get(self, path, **query): '''return a get request Parameters ---------- path : str same as get_url query : kargs dict additional info to pass to get_url See Also -------- get_url : getJson : Returns ------- requests.models.Response the r...	[ "async", "def", "get", "(", "self", ",", "path", ",", "", "", "query", ")", ":", "url", "=", "self", ".", "get_url", "(", "path", ",", "", "", "query", ")", "for", "i", "in", "range", "(", "self", ".", "tries", "+", "1", ")", ":", "try", ...	22.058824	20.823529
def sign_execute_cancellation(cancellation_params, key_pair): """ Function to sign the parameters required to execute a cancellation request on the Switcheo Exchange. Execution of this function is as follows:: sign_execute_cancellation(cancellation_params=signable_params, key_pair=key_pair) Th...	[ "def", "sign_execute_cancellation", "(", "cancellation_params", ",", "key_pair", ")", ":", "signature", "=", "sign_transaction", "(", "transaction", "=", "cancellation_params", "[", "'transaction'", "]", ",", "private_key_hex", "=", "private_key_to_hex", "(", "key_pair"...	45.409091	30.681818
def vb_list_machines(**kwargs): ''' Which machines does the hypervisor have @param kwargs: Passed to vb_xpcom_to_attribute_dict to filter the attributes @type kwargs: dict @return: Untreated dicts of the machines known to the hypervisor @rtype: [{}] ''' manager = vb_get_manager() mac...	[ "def", "vb_list_machines", "(", "", "", "kwargs", ")", ":", "manager", "=", "vb_get_manager", "(", ")", "machines", "=", "manager", ".", "getArray", "(", "vb_get_box", "(", ")", ",", "'machines'", ")", "return", "[", "vb_xpcom_to_attribute_dict", "(", "mac...	34.142857	22
def cli_print(msg, color='', end=None, file=sys.stdout, logger=_LOG): """Print the message to file and also log it. This function is intended as a 'tee' mechanism to enable the CLI interface as a first-class citizen, while ensuring that everything the operator sees also has an analogous logging entry in the te...	[ "def", "cli_print", "(", "msg", ",", "color", "=", "''", ",", "end", "=", "None", ",", "file", "=", "sys", ".", "stdout", ",", "logger", "=", "_LOG", ")", ":", "if", "logger", ":", "logger", ".", "debug", "(", "'-> {}'", ".", "format", "(", "msg"...	42.96	24.08
def register_method(func, name=None, deprecated=False): """Register a method of calculating an average spectrogram. Parameters ---------- func : `callable` function to execute name : `str`, optional name of the method, defaults to ``func.__name__`` deprecated : `bool`, optiona...	[ "def", "register_method", "(", "func", ",", "name", "=", "None", ",", "deprecated", "=", "False", ")", ":", "# warn about deprecated functions", "if", "deprecated", ":", "func", "=", "deprecated_function", "(", "func", ",", "\"the {0!r} PSD methods is deprecated, and ...	27.857143	21.342857
def service_absent(name, namespace='default', **kwargs): ''' Ensures that the named service is absent from the given namespace. name The name of the service namespace The name of the namespace ''' ret = {'name': name, 'changes': {}, 'result': False, ...	[ "def", "service_absent", "(", "name", ",", "namespace", "=", "'default'", ",", "", "", "kwargs", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'changes'", ":", "{", "}", ",", "'result'", ":", "False", ",", "'comment'", ":", "''", "}", "...	27.307692	23.820513
def filter_nomedia(album, settings=None): """Removes all filtered Media and subdirs from an Album""" nomediapath = os.path.join(album.src_path, ".nomedia") if os.path.isfile(nomediapath): if os.path.getsize(nomediapath) == 0: logger.info("Ignoring album '%s' because of present 0-byte " ...	[ "def", "filter_nomedia", "(", "album", ",", "settings", "=", "None", ")", ":", "nomediapath", "=", "os", ".", "path", ".", "join", "(", "album", ".", "src_path", ",", "\".nomedia\"", ")", "if", "os", ".", "path", ".", "isfile", "(", "nomediapath", ")",...	42.615385	21.794872
def formatTimeFromNow(secs=0): """ Properly Format Time that is `x` seconds in the future :param int secs: Seconds to go in the future (`x>0`) or the past (`x<0`) :return: Properly formated time for Graphene (`%Y-%m-%dT%H:%M:%S`) :rtype: str """ return datetime.utcfromtimestamp(time.time() ...	[ "def", "formatTimeFromNow", "(", "secs", "=", "0", ")", ":", "return", "datetime", ".", "utcfromtimestamp", "(", "time", ".", "time", "(", ")", "+", "int", "(", "secs", ")", ")", ".", "strftime", "(", "timeformat", ")" ]	38.333333	24.888889
def mod(self, x, axis): """Function to modulo 3D View with vector or 2D array (type = numpy.ndarray or 2D Field or 2D View) or 2D View with vector (type = numpy.ndarray) :param x: array(1D, 2D) or field (2D) or View(2D) :param axis: specifies axis, eg. axis = (1,2) plane lies in yz-plane, axis=0...	[ "def", "mod", "(", "self", ",", "x", ",", "axis", ")", ":", "return", "self", ".", "__array_op", "(", "operator", ".", "mod", ",", "x", ",", "axis", ")" ]	67	19.857143
def pick_free_port(hostname=REDIRECT_HOST, port=0): """ Try to bind a port. Default=0 selects a free port. """ import socket s = socket.socket(socket.AF_INET, socket.SOCK_STREAM) try: s.bind((hostname, port)) # port=0 finds an open port except OSError as e: log.warning("Could not bi...	[ "def", "pick_free_port", "(", "hostname", "=", "REDIRECT_HOST", ",", "port", "=", "0", ")", ":", "import", "socket", "s", "=", "socket", ".", "socket", "(", "socket", ".", "AF_INET", ",", "socket", ".", "SOCK_STREAM", ")", "try", ":", "s", ".", "bind",...	37.5	18.25
def saveFileTo(self, buf, encoding): """Dump an XML document to an I/O buffer. Warning ! This call xmlOutputBufferClose() on buf which is not available after this call. """ if buf is None: buf__o = None else: buf__o = buf._o ret = libxml2mod.xmlSaveFileTo(buf__o, sel...	[ "def", "saveFileTo", "(", "self", ",", "buf", ",", "encoding", ")", ":", "if", "buf", "is", "None", ":", "buf__o", "=", "None", "else", ":", "buf__o", "=", "buf", ".", "_o", "ret", "=", "libxml2mod", ".", "xmlSaveFileTo", "(", "buf__o", ",", "self", ...	43.375	11.625
def execute(cls, stage, state, data, next_allowed_exec_time=None): """Execute the operation, rate limiting allowing.""" try: context = Context.from_state(state, stage) now = datetime.utcnow() if next_allowed_exec_time and now < next_allowed_exec_time: ...	[ "def", "execute", "(", "cls", ",", "stage", ",", "state", ",", "data", ",", "next_allowed_exec_time", "=", "None", ")", ":", "try", ":", "context", "=", "Context", ".", "from_state", "(", "state", ",", "stage", ")", "now", "=", "datetime", ".", "utcnow...	46.741935	16.419355
def header(settings): """ Writes the Latex header using the settings file. The header includes all packages and defines all tikz styles. :param dictionary settings: LaTeX settings for document. :return: Header of the LaTeX document. :rtype: string """ packages = (r"\documentclass[conve...	[ "def", "header", "(", "settings", ")", ":", "packages", "=", "(", "r\"\\documentclass[convert={density=300,outext=.png}]{standalone}\"", ",", "r\"\\usepackage[margin=1in]{geometry}\"", ",", "r\"\\usepackage[hang,small,bf]{caption}\"", ",", "r\"\\usepackage{tikz}\"", ",", "r\"\\usep...	52.537037	28.648148
def gradient_helper(optimizer, loss, var_list=None): '''A helper to get the gradients out at each step. Args: optimizer: the optimizer op. loss: the op that computes your loss value. Returns: the gradient tensors and the train_step op. ''' if var_list is None: var_list = tf.compa...	[ "def", "gradient_helper", "(", "optimizer", ",", "loss", ",", "var_list", "=", "None", ")", ":", "if", "var_list", "is", "None", ":", "var_list", "=", "tf", ".", "compat", ".", "v1", ".", "trainable_variables", "(", ")", "grads_and_vars", "=", "optimizer",...	32.25	23
def name_indel_mutation(sbjct_seq, indel, sbjct_rf_indel, qry_rf_indel, codon_no, mut, start_offset): """ This function serves to name the individual mutations dependently on the type of the mutation. """ # Get the subject and query sequences without gaps sbjct_nucs = sbjct_rf_indel.replace("-"...	[ "def", "name_indel_mutation", "(", "sbjct_seq", ",", "indel", ",", "sbjct_rf_indel", ",", "qry_rf_indel", ",", "codon_no", ",", "mut", ",", "start_offset", ")", ":", "# Get the subject and query sequences without gaps", "sbjct_nucs", "=", "sbjct_rf_indel", ".", "replace...	34.62963	22.814815
def disagg_prec(dailyData, method='equal', cascade_options=None, hourly_data_obs=None, zerodiv="uniform", shift=0): """The disaggregation function for precipitation. Parameters ---------- dailyData : pd.Series daily...	[ "def", "disagg_prec", "(", "dailyData", ",", "method", "=", "'equal'", ",", "cascade_options", "=", "None", ",", "hourly_data_obs", "=", "None", ",", "zerodiv", "=", "\"uniform\"", ",", "shift", "=", "0", ")", ":", "if", "method", "not", "in", "(", "'equ...	34.534884	17.325581
def select(*cases): """ Select the first case that becomes ready. If a default case (:class:`goless.dcase`) is present, return that if no other cases are ready. If there is no default case and no case is ready, block until one becomes ready. See Go's ``reflect.Select`` method for an analog ...	[ "def", "select", "(", "*", "cases", ")", ":", "if", "len", "(", "cases", ")", "==", "0", ":", "return", "# If the first argument is a list, it should be the only argument", "if", "isinstance", "(", "cases", "[", "0", "]", ",", "list", ")", ":", "if", "len", ...	37.924528	18.830189
def make_eventlogitem_message(message, condition='contains', negate=False, preserve_case=False): """ Create a node for EventLogItem/message :return: A IndicatorItem represented as an Element node """ document = 'EventLogItem' search = 'EventLogItem/message' content_type = 'string' c...	[ "def", "make_eventlogitem_message", "(", "message", ",", "condition", "=", "'contains'", ",", "negate", "=", "False", ",", "preserve_case", "=", "False", ")", ":", "document", "=", "'EventLogItem'", "search", "=", "'EventLogItem/message'", "content_type", "=", "'s...	40.846154	22.230769
def sparse_segment(cords): r""" Create a segment of a sparse grid. Convert a ol-index to sparse grid coordinates on ``[0, 1]^N`` hyper-cube. A sparse grid of order ``D`` coencide with the set of sparse_segments where ``\|\|cords\|\|_1 <= D``. More specifically, a segment of: .. math:: ...	[ "def", "sparse_segment", "(", "cords", ")", ":", "cords", "=", "np", ".", "array", "(", "cords", ")", "+", "1", "slices", "=", "[", "]", "for", "cord", "in", "cords", ":", "slices", ".", "append", "(", "slice", "(", "1", ",", "2", "**", "cord", ...	26.021277	22.510638
def send_template(self, template, to, reply_to=None, context): """ Send Template message """ if self.provider == "SES": self.mail.send_template(template=template, to=to, reply_to=reply_to, context) elif self.provider == "FLASK-MAIL": ses_mail = ses_mai...	[ "def", "send_template", "(", "self", ",", "template", ",", "to", ",", "reply_to", "=", "None", ",", "", "", "context", ")", ":", "if", "self", ".", "provider", "==", "\"SES\"", ":", "self", ".", "mail", ".", "send_template", "(", "template", "=", "...	46.117647	17.529412
def delete(self, key): '''Removes the object named by `key`. Removes the object from the collection corresponding to ``key.path``. Args: key: Key naming the object to remove. ''' try: del self._collection(key)[key] if len(self._collection(key)) == 0: del self._items[str(...	[ "def", "delete", "(", "self", ",", "key", ")", ":", "try", ":", "del", "self", ".", "_collection", "(", "key", ")", "[", "key", "]", "if", "len", "(", "self", ".", "_collection", "(", "key", ")", ")", "==", "0", ":", "del", "self", ".", "_items...	23.4	21.666667
def as_ihex(self, number_of_data_bytes=32, address_length_bits=32): """Format the binary file as Intel HEX records and return them as a string. `number_of_data_bytes` is the number of data bytes in each record. `address_length_bits` is the number of address bits in each ...	[ "def", "as_ihex", "(", "self", ",", "number_of_data_bytes", "=", "32", ",", "address_length_bits", "=", "32", ")", ":", "def", "i32hex", "(", "address", ",", "extended_linear_address", ",", "data_address", ")", ":", "if", "address", ">", "0xffffffff", ":", "...	41.017094	20.82906
def _compile(cls, lines): '''Return the filename from the current line.''' m = cls.RE_EXTEND.match(lines.current) if m is None: raise DefineBlockError('''Incorrect block definition at line {}, {} Should be something like: #extend path/foo.html:'''.format( lines.pos, l...	[ "def", "_compile", "(", "cls", ",", "lines", ")", ":", "m", "=", "cls", ".", "RE_EXTEND", ".", "match", "(", "lines", ".", "current", ")", "if", "m", "is", "None", ":", "raise", "DefineBlockError", "(", "'''Incorrect block definition at line {}, {}\nShould be ...	44.125	16.375
def dict(self): """ the python object for rendering json. It is called dict to be coherent with the other modules but it actually returns a list :return: the python object for rendering json :rtype: list """ json_list = [] for step in self.steps...	[ "def", "dict", "(", "self", ")", ":", "json_list", "=", "[", "]", "for", "step", "in", "self", ".", "steps", ":", "json_list", ".", "append", "(", "step", ".", "dict", ")", "return", "json_list" ]	24.8	17.733333
def _worker_handler(future, worker, pipe, timeout): """Worker lifecycle manager. Waits for the worker to be perform its task, collects result, runs the callback and cleans up the process. """ result = _get_result(future, pipe, timeout) if isinstance(result, BaseException): if isinstan...	[ "def", "_worker_handler", "(", "future", ",", "worker", ",", "pipe", ",", "timeout", ")", ":", "result", "=", "_get_result", "(", "future", ",", "pipe", ",", "timeout", ")", "if", "isinstance", "(", "result", ",", "BaseException", ")", ":", "if", "isinst...	27	17.473684
def get_response(self, request): '''Returns the redirect response for this exception.''' # the redirect key is already placed in the response by HttpResponseJavascriptRedirect return HttpResponseJavascriptRedirect(self.redirect_to, self.args, *self.kwargs)	[ "def", "get_response", "(", "self", ",", "request", ")", ":", "# the redirect key is already placed in the response by HttpResponseJavascriptRedirect", "return", "HttpResponseJavascriptRedirect", "(", "self", ".", "redirect_to", ",", "", "self", ".", "args", ",", "", "*...	69.75	33.75
def Tautoignition(CASRN, AvailableMethods=False, Method=None): r'''This function handles the retrieval or calculation of a chemical's autoifnition temperature. Lookup is based on CASRNs. No predictive methods are currently implemented. Will automatically select a data source to use if no Method is provi...	[ "def", "Tautoignition", "(", "CASRN", ",", "AvailableMethods", "=", "False", ",", "Method", "=", "None", ")", ":", "def", "list_methods", "(", ")", ":", "methods", "=", "[", "]", "if", "CASRN", "in", "IEC_2010", ".", "index", "and", "not", "np", ".", ...	35.084507	25.056338
def span(self, name='child_span'): """Create a child span for the current span and append it to the child spans list. :type name: str :param name: (Optional) The name of the child span. :rtype: :class: `~opencensus.trace.blankspan.BlankSpan` :returns: A child Span to be...	[ "def", "span", "(", "self", ",", "name", "=", "'child_span'", ")", ":", "child_span", "=", "BlankSpan", "(", "name", ",", "parent_span", "=", "self", ")", "self", ".", "_child_spans", ".", "append", "(", "child_span", ")", "return", "child_span" ]	36.384615	17.076923
def _lease_valid(self, lease): """ Check if the given lease exist and still has a prefix that owns it. If the lease exist but its prefix isn't, remove the lease from this store. Args: lease (lago.subnet_lease.Lease): Object representation of the lease...	[ "def", "_lease_valid", "(", "self", ",", "lease", ")", ":", "if", "not", "lease", ".", "exist", ":", "return", "None", "if", "lease", ".", "has_env", ":", "return", "lease", ".", "uuid_path", "else", ":", "self", ".", "_release", "(", "lease", ")", "...	29.636364	22.181818
def arguments(): """Pulls in command line arguments.""" DESCRIPTION = """\ """ parser = argparse.ArgumentParser(description=DESCRIPTION, formatter_class=Raw) parser.add_argument("--email", dest="email", action='store', required=False, default=False, help="An email address ...	[ "def", "arguments", "(", ")", ":", "DESCRIPTION", "=", "\"\"\"\\\n \"\"\"", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "DESCRIPTION", ",", "formatter_class", "=", "Raw", ")", "parser", ".", "add_argument", "(", "\"--email\"", "...	40.897436	32.974359
def COH(self): """Coherence. .. math:: \mathrm{COH}_{ij}(f) = \\frac{S_{ij}(f)} {\sqrt{S_{ii}(f) S_{jj}(f)}} References ---------- P. L. Nunez, R. Srinivasan, A. F. Westdorp, R. S. Wijesinghe, D. M. Tucker, R. B. Silverstei...	[ "def", "COH", "(", "self", ")", ":", "S", "=", "self", ".", "S", "(", ")", "# TODO: can we do that more efficiently?", "return", "S", "/", "np", ".", "sqrt", "(", "np", ".", "einsum", "(", "'ii..., jj... ->ij...'", ",", "S", ",", "S", ".", "conj", "(",...	41.058824	23.882353
def getdrawings(): """Get all the drawings.""" infos = Info.query.all() sketches = [json.loads(info.contents) for info in infos] return jsonify(drawings=sketches)	[ "def", "getdrawings", "(", ")", ":", "infos", "=", "Info", ".", "query", ".", "all", "(", ")", "sketches", "=", "[", "json", ".", "loads", "(", "info", ".", "contents", ")", "for", "info", "in", "infos", "]", "return", "jsonify", "(", "drawings", "...	34.8	11.4
def sendEmoji( self, emoji=None, size=EmojiSize.SMALL, thread_id=None, thread_type=ThreadType.USER, ): """ Deprecated. Use :func:`fbchat.Client.send` instead """ return self.send( Message(text=emoji, emoji_size=size), th...	[ "def", "sendEmoji", "(", "self", ",", "emoji", "=", "None", ",", "size", "=", "EmojiSize", ".", "SMALL", ",", "thread_id", "=", "None", ",", "thread_type", "=", "ThreadType", ".", "USER", ",", ")", ":", "return", "self", ".", "send", "(", "Message", ...	24.733333	15
def _parse_kick(client, command, actor, args): """Parse a KICK and update channel states, then dispatch events. Note that two events are dispatched here: - KICK, because a user was kicked from the channel - MEMBERS, because the channel's members changed """ actor = User(actor) args,...	[ "def", "_parse_kick", "(", "client", ",", "command", ",", "actor", ",", "args", ")", ":", "actor", "=", "User", "(", "actor", ")", "args", ",", "_", ",", "message", "=", "args", ".", "partition", "(", "' :'", ")", "channel", ",", "target", "=", "ar...	39.941176	10.588235
def get_html_theme_path(): """ Get the absolute path of the directory containing the theme files. """ return os.path.abspath(os.path.dirname(os.path.dirname(__file__)))	[ "def", "get_html_theme_path", "(", ")", ":", "return", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "dirname", "(", "os", ".", "path", ".", "dirname", "(", "__file__", ")", ")", ")" ]	36	14.8
def clean_up(self): """Do clean-up before returning buffer""" self.action_buffer = [] self.sources = {} self.doc_to_get = {} self.doc_to_update = []	[ "def", "clean_up", "(", "self", ")", ":", "self", ".", "action_buffer", "=", "[", "]", "self", ".", "sources", "=", "{", "}", "self", ".", "doc_to_get", "=", "{", "}", "self", ".", "doc_to_update", "=", "[", "]" ]	30.5	11
def capacity_sp_meyerhof_and_hanna_1978(sp, fd, verbose=0): """ Calculates the two-layered foundation capacity according Meyerhof and Hanna (1978) :param sp: Soil profile object :param fd: Foundation object :param wtl: water table level :param verbose: verbosity :return: ultimate bearing st...	[ "def", "capacity_sp_meyerhof_and_hanna_1978", "(", "sp", ",", "fd", ",", "verbose", "=", "0", ")", ":", "assert", "isinstance", "(", "sp", ",", "sm", ".", "SoilProfile", ")", "sl_0", "=", "sp", ".", "layer", "(", "1", ")", "sl_1", "=", "sp", ".", "la...	43.55	27.773077
async def fetch_guild(self, guild_id): """\|coro\| Retrieves a :class:`.Guild` from an ID. .. note:: Using this, you will not receive :attr:`.Guild.channels`, :class:`.Guild.members`, :attr:`.Member.activity` and :attr:`.Member.voice` per :class:`.Member`. .. no...	[ "async", "def", "fetch_guild", "(", "self", ",", "guild_id", ")", ":", "data", "=", "await", "self", ".", "http", ".", "get_guild", "(", "guild_id", ")", "return", "Guild", "(", "data", "=", "data", ",", "state", "=", "self", ".", "_connection", ")" ]	26.393939	23.727273
def attribute(func): """Wrap a function as an attribute.""" attr = abc.abstractmethod(func) attr.__iattribute__ = True attr = _property(attr) return attr	[ "def", "attribute", "(", "func", ")", ":", "attr", "=", "abc", ".", "abstractmethod", "(", "func", ")", "attr", ".", "__iattribute__", "=", "True", "attr", "=", "_property", "(", "attr", ")", "return", "attr" ]	28	12.333333
def evidence_from_inversion_terms(chi_squared, regularization_term, log_curvature_regularization_term, log_regularization_term, noise_normalization): """Compute the evidence of an inversion's fit to the datas, where the evidence includes a number of \ terms which quantify the c...	[ "def", "evidence_from_inversion_terms", "(", "chi_squared", ",", "regularization_term", ",", "log_curvature_regularization_term", ",", "log_regularization_term", ",", "noise_normalization", ")", ":", "return", "-", "0.5", "*", "(", "chi_squared", "+", "regularization_term",...	58.25	31.25
def p_InterfaceDefList(p): ''' InterfaceDefList : InterfaceDef \| InterfaceDefList InterfaceDef ''' if len(p) < 3: p[0] = InterfaceDefList(None, p[1]) else: p[0] = InterfaceDefList(p[1], p[2])	[ "def", "p_InterfaceDefList", "(", "p", ")", ":", "if", "len", "(", "p", ")", "<", "3", ":", "p", "[", "0", "]", "=", "InterfaceDefList", "(", "None", ",", "p", "[", "1", "]", ")", "else", ":", "p", "[", "0", "]", "=", "InterfaceDefList", "(", ...	26.666667	17.333333
def prompt_update_all(config: 'Config'): """Prompt each field of the configuration to the user.""" click.echo() click.echo('Welcome !') click.echo('Press enter to keep the defaults or enter a new value to update the configuration.') click.echo('Press Ctrl+C at any time to quit and save') click....	[ "def", "prompt_update_all", "(", "config", ":", "'Config'", ")", ":", "click", ".", "echo", "(", ")", "click", ".", "echo", "(", "'Welcome !'", ")", "click", ".", "echo", "(", "'Press enter to keep the defaults or enter a new value to update the configuration.'", ")",...	36.931818	24.227273
def _dispatch(self, cmd, args): """Attempt to run the given command with the given arguments """ if cmd in self.clis: extern_cmd, args = args[0], args[1:] self.clis[cmd]._dispatch(extern_cmd, args) else: if cmd in self.cmds: callback, p...	[ "def", "_dispatch", "(", "self", ",", "cmd", ",", "args", ")", ":", "if", "cmd", "in", "self", ".", "clis", ":", "extern_cmd", ",", "args", "=", "args", "[", "0", "]", ",", "args", "[", "1", ":", "]", "self", ".", "clis", "[", "cmd", "]", "."...	38.375	13.3125
def trigger_show_by_trigger_name(self, trigger_name, kwargs): "https://developer.zendesk.com/rest_api/docs/chat/triggers#get-a-trigger" api_path = "/api/v2/triggers/{trigger_name}" api_path = api_path.format(trigger_name=trigger_name) return self.call(api_path, kwargs)	[ "def", "trigger_show_by_trigger_name", "(", "self", ",", "trigger_name", ",", "", "", "kwargs", ")", ":", "api_path", "=", "\"/api/v2/triggers/{trigger_name}\"", "api_path", "=", "api_path", ".", "format", "(", "trigger_name", "=", "trigger_name", ")", "return", ...	60.2	20.2
def bias_abs(sim=None, obs=None, node=None, skip_nan=False): """Calculate the absolute difference between the means of the simulated and the observed values. >>> from hydpy import round_ >>> from hydpy import bias_abs >>> round_(bias_abs(sim=[2.0, 2.0, 2.0], obs=[1.0, 2.0, 3.0])) 0.0 >>> ro...	[ "def", "bias_abs", "(", "sim", "=", "None", ",", "obs", "=", "None", ",", "node", "=", "None", ",", "skip_nan", "=", "False", ")", ":", "sim", ",", "obs", "=", "prepare_arrays", "(", "sim", ",", "obs", ",", "node", ",", "skip_nan", ")", "return", ...	36.833333	20.5
def _data(self): """A simpler version of data to avoid infinite recursion in some cases. Don't use this. """ if self.is_caching: return self.cache with open(self.path, "r") as f: return json.load(f)	[ "def", "_data", "(", "self", ")", ":", "if", "self", ".", "is_caching", ":", "return", "self", ".", "cache", "with", "open", "(", "self", ".", "path", ",", "\"r\"", ")", "as", "f", ":", "return", "json", ".", "load", "(", "f", ")" ]	28.333333	12.777778
def transform_with(self, estimator, out_ds, fmt=None): """Call the partial_transform method of the estimator on this dataset Parameters ---------- estimator : object with ``partial_fit`` method This object will be used to transform this dataset into a new dataset...	[ "def", "transform_with", "(", "self", ",", "estimator", ",", "out_ds", ",", "fmt", "=", "None", ")", ":", "if", "isinstance", "(", "out_ds", ",", "str", ")", ":", "out_ds", "=", "self", ".", "create_derived", "(", "out_ds", ",", "fmt", "=", "fmt", ")...	39.354839	19.096774
def derivatives(self, x, y, n_sersic, R_sersic, k_eff, center_x=0, center_y=0): """ returns df/dx and df/dy of the function """ x_ = x - center_x y_ = y - center_y r = np.sqrt(x_2 + y_2) if isinstance(r, int) or isinstance(r, float): r = max(self._...	[ "def", "derivatives", "(", "self", ",", "x", ",", "y", ",", "n_sersic", ",", "R_sersic", ",", "k_eff", ",", "center_x", "=", "0", ",", "center_y", "=", "0", ")", ":", "x_", "=", "x", "-", "center_x", "y_", "=", "y", "-", "center_y", "r", "=", "...	35.266667	14.733333
def list_namespaces(): '''Print out a listing of available namespaces''' print('{:30s}\t{:40s}'.format('NAME', 'DESCRIPTION')) print('-' * 78) for sch in sorted(__NAMESPACE__): desc = __NAMESPACE__[sch]['description'] desc = (desc[:44] + '..') if len(desc) > 46 else desc print('{...	[ "def", "list_namespaces", "(", ")", ":", "print", "(", "'{:30s}\\t{:40s}'", ".", "format", "(", "'NAME'", ",", "'DESCRIPTION'", ")", ")", "print", "(", "'-'", "*", "78", ")", "for", "sch", "in", "sorted", "(", "__NAMESPACE__", ")", ":", "desc", "=", "_...	43.25	13.75
def dissolve(collection, aggfunc=None): # type: (BaseCollection, Optional[Callable[[list], Any]]) -> GeoFeature """Dissolves features contained in a FeatureCollection and applies an aggregation function to its properties. """ new_properties = {} if aggfunc: temp_properties = defaultdict...	[ "def", "dissolve", "(", "collection", ",", "aggfunc", "=", "None", ")", ":", "# type: (BaseCollection, Optional[Callable[[list], Any]]) -> GeoFeature", "new_properties", "=", "{", "}", "if", "aggfunc", ":", "temp_properties", "=", "defaultdict", "(", "list", ")", "# t...	35.136364	19.409091
async def query_presence(self, query_presence_request): """Return presence status for a list of users.""" response = hangouts_pb2.QueryPresenceResponse() await self._pb_request('presence/querypresence', query_presence_request, response) return response	[ "async", "def", "query_presence", "(", "self", ",", "query_presence_request", ")", ":", "response", "=", "hangouts_pb2", ".", "QueryPresenceResponse", "(", ")", "await", "self", ".", "_pb_request", "(", "'presence/querypresence'", ",", "query_presence_request", ",", ...	51.666667	14.5
def markdown_toclify(input_file, output_file=None, github=False, back_to_top=False, nolink=False, no_toc_header=False, spacer=0, placeholder=None, exclude_h=None, remove_dashes=False): """ Function to add table of contents to markdown files. Parame...	[ "def", "markdown_toclify", "(", "input_file", ",", "output_file", "=", "None", ",", "github", "=", "False", ",", "back_to_top", "=", "False", ",", "nolink", "=", "False", ",", "no_toc_header", "=", "False", ",", "spacer", "=", "0", ",", "placeholder", "=",...	36	20.808219

def _close_connection(self, frame_in): """Connection Close. :param specification.Connection.Close frame_in: Amqp frame. :return: """ self._set_connection_state(Stateful.CLOSED) if frame_in.reply_code != 200: reply_text = try_utf8_decode(frame_in.reply_text) ...

[ "def", "_close_connection", "(", "self", ",", "frame_in", ")", ":", "self", ".", "_set_connection_state", "(", "Stateful", ".", "CLOSED", ")", "if", "frame_in", ".", "reply_code", "!=", "200", ":", "reply_text", "=", "try_utf8_decode", "(", "frame_in", ".", ...

40.2

17.866667

async def abort(self): """Abort current group session.""" state = await self.state() res = await self.call("X_Abort", MasterSessionID=state.MasterSessionID) return res

[ "async", "def", "abort", "(", "self", ")", ":", "state", "=", "await", "self", ".", "state", "(", ")", "res", "=", "await", "self", ".", "call", "(", "\"X_Abort\"", ",", "MasterSessionID", "=", "state", ".", "MasterSessionID", ")", "return", "res" ]

39

17

def from_soup(self,author,soup): """ Factory Pattern. Fetches contact data from given soup and builds the object """ email = soup.find('span',class_='icon icon-mail').findParent('a').get('href').split(':')[-1] if soup.find('span',class_='icon icon-mail') else '' facebook = soup.find('span',class_='icon ico...

[ "def", "from_soup", "(", "self", ",", "author", ",", "soup", ")", ":", "email", "=", "soup", ".", "find", "(", "'span'", ",", "class_", "=", "'icon icon-mail'", ")", ".", "findParent", "(", "'a'", ")", ".", "get", "(", "'href'", ")", ".", "split", ...

81.333333

50.777778

def metadata_response(self, request, full_url, headers): """ Mock response for localhost metadata http://docs.aws.amazon.com/AWSEC2/latest/UserGuide/AESDG-chapter-instancedata.html """ parsed_url = urlparse(full_url) tomorrow = datetime.datetime.utcnow() + datetime.time...

[ "def", "metadata_response", "(", "self", ",", "request", ",", "full_url", ",", "headers", ")", ":", "parsed_url", "=", "urlparse", "(", "full_url", ")", "tomorrow", "=", "datetime", ".", "datetime", ".", "utcnow", "(", ")", "+", "datetime", ".", "timedelta...

34.076923

16.282051

def connect(self): """Connect the |LinkSequence| instances handled by the actual model to the |NodeSequence| instances handled by one inlet node and multiple oulet nodes. The HydPy-H-Branch model passes multiple output values to different outlet nodes. This requires additional ...

[ "def", "connect", "(", "self", ")", ":", "nodes", "=", "self", ".", "element", ".", "inlets", "total", "=", "self", ".", "sequences", ".", "inlets", ".", "total", "if", "total", ".", "shape", "!=", "(", "len", "(", "nodes", ")", ",", ")", ":", "t...

41.652174

19.275362

def create_row_to_some_id_col_mapping(id_array): """ Parameters ---------- id_array : 1D ndarray. All elements of the array should be ints representing some id related to the corresponding row. Returns ------- rows_to_ids : 2D scipy sparse array. Will map each row of...

[ "def", "create_row_to_some_id_col_mapping", "(", "id_array", ")", ":", "# Get the unique ids, in their original order of appearance", "original_order_unique_ids", "=", "get_original_order_unique_ids", "(", "id_array", ")", "# Create a matrix with the same number of rows as id_array but a s...

40.461538

23.076923

def get_ids_by_expression(self, expression, threshold=0.001, func=np.sum): """ Use a PEG to parse expression and return study IDs.""" lexer = lp.Lexer() lexer.build() parser = lp.Parser( lexer, self.dataset, threshold=threshold, func=func) parser.build() retur...

[ "def", "get_ids_by_expression", "(", "self", ",", "expression", ",", "threshold", "=", "0.001", ",", "func", "=", "np", ".", "sum", ")", ":", "lexer", "=", "lp", ".", "Lexer", "(", ")", "lexer", ".", "build", "(", ")", "parser", "=", "lp", ".", "Pa...

44.125

16.875

def add_management_certificate(kwargs=None, conn=None, call=None): ''' .. versionadded:: 2015.8.0 Add a new management certificate CLI Example: .. code-block:: bash salt-cloud -f add_management_certificate my-azure public_key='...PUBKEY...' \\ thumbprint=0123456789ABCDEF data...

[ "def", "add_management_certificate", "(", "kwargs", "=", "None", ",", "conn", "=", "None", ",", "call", "=", "None", ")", ":", "if", "call", "!=", "'function'", ":", "raise", "SaltCloudSystemExit", "(", "'The add_management_certificate function must be called with -f ...

31.093023

27.139535

def get_sudoers_entry(username=None, sudoers_entries=None): """ Find the sudoers entry in the sudoers file for the specified user. args: username (str): username. sudoers_entries (list): list of lines from the sudoers file. returns:`r str: sudoers entry for the specified user. ...

[ "def", "get_sudoers_entry", "(", "username", "=", "None", ",", "sudoers_entries", "=", "None", ")", ":", "for", "entry", "in", "sudoers_entries", ":", "if", "entry", ".", "startswith", "(", "username", ")", ":", "return", "entry", ".", "replace", "(", "use...

33.769231

17.230769

def revoke_sudo_privileges(request): """ Revoke sudo privileges from a request explicitly """ request._sudo = False if COOKIE_NAME in request.session: del request.session[COOKIE_NAME]

[ "def", "revoke_sudo_privileges", "(", "request", ")", ":", "request", ".", "_sudo", "=", "False", "if", "COOKIE_NAME", "in", "request", ".", "session", ":", "del", "request", ".", "session", "[", "COOKIE_NAME", "]" ]

29.285714

4.714286

def verify_otp(request): """ Verify a OTP request """ ctx = {} if request.method == "POST": verification_code = request.POST.get('verification_code') if verification_code is None: ctx['error_message'] = "Missing verification code." else: otp_ = UserO...

[ "def", "verify_otp", "(", "request", ")", ":", "ctx", "=", "{", "}", "if", "request", ".", "method", "==", "\"POST\"", ":", "verification_code", "=", "request", ".", "POST", ".", "get", "(", "'verification_code'", ")", "if", "verification_code", "is", "Non...

35.48

23

def list(self, prefix='', delimiter=None): """Limits a list of Bucket's objects based on prefix and delimiter.""" return self.service._list( bucket=self.name, prefix=prefix, delimiter=delimiter, objects=True )

[ "def", "list", "(", "self", ",", "prefix", "=", "''", ",", "delimiter", "=", "None", ")", ":", "return", "self", ".", "service", ".", "_list", "(", "bucket", "=", "self", ".", "name", ",", "prefix", "=", "prefix", ",", "delimiter", "=", "delimiter", ...

48.2

15.4

def update_data(self): """ Returns data for all users including shared data files. """ url = ('https://www.openhumans.org/api/direct-sharing/project/' 'members/?access_token={}'.format(self.master_access_token)) results = get_all_results(url) self.project_d...

[ "def", "update_data", "(", "self", ")", ":", "url", "=", "(", "'https://www.openhumans.org/api/direct-sharing/project/'", "'members/?access_token={}'", ".", "format", "(", "self", ".", "master_access_token", ")", ")", "results", "=", "get_all_results", "(", "url", ")"...

47.263158

15.578947

def distill_model_event(instance, model, action, user_override=None): """ Take created, updated and deleted actions for built-in app/model mappings, convert to the defined event.name and let hooks fly. If that model isn't represented, we just quit silenty. """ from rest_hooks.models import ...

[ "def", "distill_model_event", "(", "instance", ",", "model", ",", "action", ",", "user_override", "=", "None", ")", ":", "from", "rest_hooks", ".", "models", "import", "HOOK_EVENTS", "event_name", "=", "None", "for", "maybe_event_name", ",", "auto", "in", "HOO...

38.038462

16.576923

def ReadOffer(self, offer_link): """Reads an offer. :param str offer_link: The link to the offer. :return: The read Offer. :rtype: dict """ path = base.GetPathFromLink(offer_link) offer_id = base.GetResourceIdOrFullNameFromLi...

[ "def", "ReadOffer", "(", "self", ",", "offer_link", ")", ":", "path", "=", "base", ".", "GetPathFromLink", "(", "offer_link", ")", "offer_id", "=", "base", ".", "GetResourceIdOrFullNameFromLink", "(", "offer_link", ")", "return", "self", ".", "Read", "(", "p...

25.4

18.933333

def run(self, app_input, *args, **kwargs): """ Creates a new job that executes the function "main" of this app with the given input *app_input*. See :meth:`dxpy.bindings.dxapplet.DXExecutable.run` for the available args. """ # Rename app_input to preserve API com...

[ "def", "run", "(", "self", ",", "app_input", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "# Rename app_input to preserve API compatibility when calling", "# DXApp.run(app_input=...).", "return", "super", "(", "DXApp", ",", "self", ")", ".", "run", "(", ...

39.545455

18.636364

def tocimxml(self): """ Return the CIM-XML representation of this CIM qualifier type, as an object of an appropriate subclass of :term:`Element`. The returned CIM-XML representation is a `QUALIFIER.DECLARATION` element consistent with :term:`DSP0201`. Returns: ...

[ "def", "tocimxml", "(", "self", ")", ":", "if", "self", ".", "value", "is", "None", ":", "value_xml", "=", "None", "elif", "isinstance", "(", "self", ".", "value", ",", "(", "tuple", ",", "list", ")", ")", ":", "array_xml", "=", "[", "]", "for", ...

40.571429

23.52381

def send(self, request, blocking=True): """Queue request for async network send, return Future()""" future = Future() if self.connecting(): return future.failure(Errors.NodeNotReadyError(str(self))) elif not self.connected(): return future.failure(Errors.KafkaConn...

[ "def", "send", "(", "self", ",", "request", ",", "blocking", "=", "True", ")", ":", "future", "=", "Future", "(", ")", "if", "self", ".", "connecting", "(", ")", ":", "return", "future", ".", "failure", "(", "Errors", ".", "NodeNotReadyError", "(", "...

50.4

14.7

def cli(ctx, feature_id, name, organism="", sequence=""): """Set a feature's name Output: A standard apollo feature dictionary ({"features": [{...}]}) """ return ctx.gi.annotations.set_name(feature_id, name, organism=organism, sequence=sequence)

[ "def", "cli", "(", "ctx", ",", "feature_id", ",", "name", ",", "organism", "=", "\"\"", ",", "sequence", "=", "\"\"", ")", ":", "return", "ctx", ".", "gi", ".", "annotations", ".", "set_name", "(", "feature_id", ",", "name", ",", "organism", "=", "or...

32

26

def dump(self, filename, encoding="utf8"): """ Dumps the ascii art in the file. Args: filename (str): File to dump the ascii art. encoding (str): Optional. Default "utf-8". """ with open(filename, mode='w', encoding=encoding) as text_file: text...

[ "def", "dump", "(", "self", ",", "filename", ",", "encoding", "=", "\"utf8\"", ")", ":", "with", "open", "(", "filename", ",", "mode", "=", "'w'", ",", "encoding", "=", "encoding", ")", "as", "text_file", ":", "text_file", ".", "write", "(", "self", ...

38.333333

10.777778

def make_process_header(self, slug, typ, version, source_uri, description, inputs): """Generate a process definition header. :param str slug: process' slug :param str typ: process' type :param str version: process' version :param str source_uri: url to the process definition ...

[ "def", "make_process_header", "(", "self", ",", "slug", ",", "typ", ",", "version", ",", "source_uri", ",", "description", ",", "inputs", ")", ":", "node", "=", "addnodes", ".", "desc", "(", ")", "signode", "=", "addnodes", ".", "desc_signature", "(", "s...

38.155556

23.066667

def genes_by_name(self, gene_name): """ Get all the unqiue genes with the given name (there might be multiple due to copies in the genome), return a list containing a Gene object for each distinct ID. """ gene_ids = self.gene_ids_of_gene_name(gene_name) return [se...

[ "def", "genes_by_name", "(", "self", ",", "gene_name", ")", ":", "gene_ids", "=", "self", ".", "gene_ids_of_gene_name", "(", "gene_name", ")", "return", "[", "self", ".", "gene_by_id", "(", "gene_id", ")", "for", "gene_id", "in", "gene_ids", "]" ]

45

16.25

def help_center_article_subscriptions(self, article_id, locale=None, **kwargs): "https://developer.zendesk.com/rest_api/docs/help_center/subscriptions#list-article-subscriptions" api_path = "/api/v2/help_center/articles/{article_id}/subscriptions.json" api_path = api_path.format(article_id=artic...

[ "def", "help_center_article_subscriptions", "(", "self", ",", "article_id", ",", "locale", "=", "None", ",", "*", "*", "kwargs", ")", ":", "api_path", "=", "\"/api/v2/help_center/articles/{article_id}/subscriptions.json\"", "api_path", "=", "api_path", ".", "format", ...

70.375

35.875

def namespaces(self): """Instance depends on the API version: * 2015-08-01: :class:`NamespacesOperations<azure.mgmt.eventhub.v2015_08_01.operations.NamespacesOperations>` * 2017-04-01: :class:`NamespacesOperations<azure.mgmt.eventhub.v2017_04_01.operations.NamespacesOperations>` ...

[ "def", "namespaces", "(", "self", ")", ":", "api_version", "=", "self", ".", "_get_api_version", "(", "'namespaces'", ")", "if", "api_version", "==", "'2015-08-01'", ":", "from", ".", "v2015_08_01", ".", "operations", "import", "NamespacesOperations", "as", "Ope...

67.882353

39.411765

def to_buffer(f): """ Decorator converting all strings and iterators/iterables into Buffers. """ @functools.wraps(f) def wrap(*args, **kwargs): iterator = kwargs.get('iterator', args[0]) if not isinstance(iterator, Buffer): iterator = Buffer(iterator) return f(ite...

[ "def", "to_buffer", "(", "f", ")", ":", "@", "functools", ".", "wraps", "(", "f", ")", "def", "wrap", "(", "*", "args", ",", "*", "*", "kwargs", ")", ":", "iterator", "=", "kwargs", ".", "get", "(", "'iterator'", ",", "args", "[", "0", "]", ")"...

32.090909

11.909091

def IsWalletTransaction(self, tx): """ Verifies if a transaction belongs to the wallet. Args: tx (TransactionOutput):an instance of type neo.Core.TX.Transaction.TransactionOutput to verify. Returns: bool: True, if transaction belongs to wallet. False, if not. ...

[ "def", "IsWalletTransaction", "(", "self", ",", "tx", ")", ":", "for", "key", ",", "contract", "in", "self", ".", "_contracts", ".", "items", "(", ")", ":", "for", "output", "in", "tx", ".", "outputs", ":", "if", "output", ".", "ScriptHash", ".", "To...

34.741935

22.483871

def get_activity_stream(self, before=None): """ Get user's activity stream from ``https://www.duolingo.com/stream/<user_id>?before=<date> if before date is given or else ``https://www.duolingo.com/activity/<user_id>`` :param before: Datetime in format '2015-07-06 05:42:2...

[ "def", "get_activity_stream", "(", "self", ",", "before", "=", "None", ")", ":", "if", "before", ":", "url", "=", "\"https://www.duolingo.com/stream/{}?before={}\"", "url", "=", "url", ".", "format", "(", "self", ".", "user_data", ".", "id", ",", "before", "...

35.5

16.227273

def get_independent_nodes(dag): """Get a list of all node in the graph with no dependencies.""" nodes = set(dag.keys()) dependent_nodes = set([node for downstream_nodes in dag.values() for node in downstream_nodes]) return set(nodes - dependent_nodes)

[ "def", "get_independent_nodes", "(", "dag", ")", ":", "nodes", "=", "set", "(", "dag", ".", "keys", "(", ")", ")", "dependent_nodes", "=", "set", "(", "[", "node", "for", "downstream_nodes", "in", "dag", ".", "values", "(", ")", "for", "node", "in", ...

52.6

16.4

def set_upper_lower_bands(self,e_lower,e_upper): """ Set fake upper/lower bands, useful to set the same energy range in the spin up/down bands when calculating the DOS """ lower_band = e_lower*np.ones((1,self.ebands.shape[1])) upper_band = e_upper*np.ones((1,self....

[ "def", "set_upper_lower_bands", "(", "self", ",", "e_lower", ",", "e_upper", ")", ":", "lower_band", "=", "e_lower", "*", "np", ".", "ones", "(", "(", "1", ",", "self", ".", "ebands", ".", "shape", "[", "1", "]", ")", ")", "upper_band", "=", "e_upper...

47.153846

17.769231

def _apply_tracing(self, handler, attributes): """ Helper function to avoid rewriting for middleware and decorator. Returns a new span from the request with logged attributes and correct operation name from the func. """ operation_name = self._get_operation_name(handler) ...

[ "def", "_apply_tracing", "(", "self", ",", "handler", ",", "attributes", ")", ":", "operation_name", "=", "self", ".", "_get_operation_name", "(", "handler", ")", "headers", "=", "handler", ".", "request", ".", "headers", "request", "=", "handler", ".", "req...

39.769231

18.128205

def _get_pool_results(*args, **kwargs): ''' A helper function which returns a dictionary of minion pools along with their matching result sets. Useful for developing other "survey style" functions. Optionally accepts a "survey_sort=up" or "survey_sort=down" kwargs for specifying sort order. ...

[ "def", "_get_pool_results", "(", "*", "args", ",", "*", "*", "kwargs", ")", ":", "# TODO: the option \"survey.sort=\" would be preferred for namespace", "# separation but the kwargs parser for the salt-run command seems to", "# improperly pass the options containing a \".\" in them for lat...

36.462963

25.944444

def print_genome_matrix(hits, fastas, id2desc, file_name): """ optimize later? slow ... should combine with calculate_threshold module """ out = open(file_name, 'w') fastas = sorted(fastas) print('## percent identity between genomes', file=out) print('# - \t %s' % ('\t'.join(fastas)), fi...

[ "def", "print_genome_matrix", "(", "hits", ",", "fastas", ",", "id2desc", ",", "file_name", ")", ":", "out", "=", "open", "(", "file_name", ",", "'w'", ")", "fastas", "=", "sorted", "(", "fastas", ")", "print", "(", "'## percent identity between genomes'", "...

38.03125

14.96875

def comparator(self, x, y): ''' simple comparator method ''' indX=0 indY=0 for i in range(len(self.stable_names)): if self.stable_names[i] == x[0].split('-')[0]: indX=i if self.stable_names[i] == y[0].split('-')[0]: ...

[ "def", "comparator", "(", "self", ",", "x", ",", "y", ")", ":", "indX", "=", "0", "indY", "=", "0", "for", "i", "in", "range", "(", "len", "(", "self", ".", "stable_names", ")", ")", ":", "if", "self", ".", "stable_names", "[", "i", "]", "==", ...

22.05

22.25

def new_dotdot(self, vd, parent, seqnum, rock_ridge, log_block_size, rr_relocated_parent, xa, file_mode): # type: (headervd.PrimaryOrSupplementaryVD, DirectoryRecord, int, str, int, bool, bool, int) -> None ''' Create a new 'dotdot' Directory Record. Parameters: ...

[ "def", "new_dotdot", "(", "self", ",", "vd", ",", "parent", ",", "seqnum", ",", "rock_ridge", ",", "log_block_size", ",", "rr_relocated_parent", ",", "xa", ",", "file_mode", ")", ":", "# type: (headervd.PrimaryOrSupplementaryVD, DirectoryRecord, int, str, int, bool, bool,...

48.791667

28.375

def log(logger, level, message): """Logs message to stderr if logging isn't initialized.""" if logger.parent.name != 'root': logger.log(level, message) else: print(message, file=sys.stderr)

[ "def", "log", "(", "logger", ",", "level", ",", "message", ")", ":", "if", "logger", ".", "parent", ".", "name", "!=", "'root'", ":", "logger", ".", "log", "(", "level", ",", "message", ")", "else", ":", "print", "(", "message", ",", "file", "=", ...

30.285714

12.857143

def is_multisig_address(addr, blockchain='bitcoin', **blockchain_opts): """ Is the given address a multisig address? """ if blockchain == 'bitcoin': return btc_is_multisig_address(addr, **blockchain_opts) else: raise ValueError('Unknown blockchain "{}"'.format(blockchain))

[ "def", "is_multisig_address", "(", "addr", ",", "blockchain", "=", "'bitcoin'", ",", "*", "*", "blockchain_opts", ")", ":", "if", "blockchain", "==", "'bitcoin'", ":", "return", "btc_is_multisig_address", "(", "addr", ",", "*", "*", "blockchain_opts", ")", "el...

37.75

16

def logout(): """ Log out the active user """ flogin.logout_user() next = flask.request.args.get('next') return flask.redirect(next or flask.url_for("user"))

[ "def", "logout", "(", ")", ":", "flogin", ".", "logout_user", "(", ")", "next", "=", "flask", ".", "request", ".", "args", ".", "get", "(", "'next'", ")", "return", "flask", ".", "redirect", "(", "next", "or", "flask", ".", "url_for", "(", "\"user\""...

28.666667

10

def version(context=None): ''' Attempts to run systemctl --version. Returns None if unable to determine version. ''' contextkey = 'salt.utils.systemd.version' if isinstance(context, dict): # Can't put this if block on the same line as the above if block, # because it will break t...

[ "def", "version", "(", "context", "=", "None", ")", ":", "contextkey", "=", "'salt.utils.systemd.version'", "if", "isinstance", "(", "context", ",", "dict", ")", ":", "# Can't put this if block on the same line as the above if block,", "# because it will break the elif below....

35.34375

20.09375

def writerow(self, cells): """ Write a row of cells into the default sheet of the spreadsheet. :param cells: A list of cells (most basic Python types supported). :return: Nothing. """ if self.default_sheet is None: self.default_sheet = self.new_sheet() ...

[ "def", "writerow", "(", "self", ",", "cells", ")", ":", "if", "self", ".", "default_sheet", "is", "None", ":", "self", ".", "default_sheet", "=", "self", ".", "new_sheet", "(", ")", "self", ".", "default_sheet", ".", "writerow", "(", "cells", ")" ]

38.555556

11.888889

def unregister_path(self, path): """ Unregisters given path. :param path: Path name. :type path: unicode :return: Method success. :rtype: bool """ if not path in self: raise umbra.exceptions.PathExistsError("{0} | '{1}' path isn't registered!...

[ "def", "unregister_path", "(", "self", ",", "path", ")", ":", "if", "not", "path", "in", "self", ":", "raise", "umbra", ".", "exceptions", ".", "PathExistsError", "(", "\"{0} | '{1}' path isn't registered!\"", ".", "format", "(", "self", ".", "__class__", ".",...

26

18.125

def unregister(self): '''Remove this worker from the list of available workers. This requires the worker to already have been :meth:`register()`. ''' self.task_master.worker_unregister(self.worker_id) self.task_master.worker_id = None self.worker_id = None

[ "def", "unregister", "(", "self", ")", ":", "self", ".", "task_master", ".", "worker_unregister", "(", "self", ".", "worker_id", ")", "self", ".", "task_master", ".", "worker_id", "=", "None", "self", ".", "worker_id", "=", "None" ]

33.222222

23.888889

def batch_work(self): """ Method to be executed in batch mode for collecting the required fragment (composite) and then other custom tasks. :return: """ while True: gen = collect_fragment(self._stop_event, self.config['AGORA']) for collector, (t, ...

[ "def", "batch_work", "(", "self", ")", ":", "while", "True", ":", "gen", "=", "collect_fragment", "(", "self", ".", "_stop_event", ",", "self", ".", "config", "[", "'AGORA'", "]", ")", "for", "collector", ",", "(", "t", ",", "s", ",", "p", ",", "o"...

36.352941

16.117647

def helpful_error_list_get(lst, index): """ >>> helpful_error_list_get([1, 2, 3], 1) 2 >>> helpful_error_list_get([1, 2, 3], 4) Traceback (most recent call last): ... IndexError: Tried to access 4, length is only 3 """ try: return lst[index] except IndexError: rai...

[ "def", "helpful_error_list_get", "(", "lst", ",", "index", ")", ":", "try", ":", "return", "lst", "[", "index", "]", "except", "IndexError", ":", "raise", "IndexError", "(", "'Tried to access %r, length is only %r'", "%", "(", "index", ",", "len", "(", "lst", ...

29.384615

15.384615

def n_lfom_rows(FLOW,HL_LFOM): """This equation states that the open area corresponding to one row can be set equal to two orifices of diameter=row height. If there are more than two orifices per row at the top of the LFOM then there are more orifices than are convenient to drill and more than necessary...

[ "def", "n_lfom_rows", "(", "FLOW", ",", "HL_LFOM", ")", ":", "N_estimated", "=", "(", "HL_LFOM", "*", "np", ".", "pi", "/", "(", "2", "*", "width_stout", "(", "HL_LFOM", ",", "HL_LFOM", ")", "*", "FLOW", ")", ")", "variablerow", "=", "min", "(", "1...

50.692308

24.346154

def save_module(self, obj): """ Save a module as an import """ self.modules.add(obj) self.save_reduce(subimport, (obj.__name__,), obj=obj)

[ "def", "save_module", "(", "self", ",", "obj", ")", ":", "self", ".", "modules", ".", "add", "(", "obj", ")", "self", ".", "save_reduce", "(", "subimport", ",", "(", "obj", ".", "__name__", ",", ")", ",", "obj", "=", "obj", ")" ]

25.5

9.166667

def requester( url, main_url=None, delay=0, cook=None, headers=None, timeout=10, host=None, proxies=[None], user_agents=[None], failed=None, processed=None ): """Handle the requests and return the response body.""" cook ...

[ "def", "requester", "(", "url", ",", "main_url", "=", "None", ",", "delay", "=", "0", ",", "cook", "=", "None", ",", "headers", "=", "None", ",", "timeout", "=", "10", ",", "host", "=", "None", ",", "proxies", "=", "[", "None", "]", ",", "user_ag...

28.66129

15.887097

def loss_maps(curves, conditional_loss_poes): """ :param curves: an array of loss curves :param conditional_loss_poes: a list of conditional loss poes :returns: a composite array of loss maps with the same shape """ loss_maps_dt = numpy.dtype([('poe-%s' % poe, F32) ...

[ "def", "loss_maps", "(", "curves", ",", "conditional_loss_poes", ")", ":", "loss_maps_dt", "=", "numpy", ".", "dtype", "(", "[", "(", "'poe-%s'", "%", "poe", ",", "F32", ")", "for", "poe", "in", "conditional_loss_poes", "]", ")", "loss_maps", "=", "numpy",...

45.214286

12.785714

def is_mdgel(self): """File has MD Gel format.""" # TODO: this likely reads the second page from file try: ismdgel = self.pages[0].is_mdgel or self.pages[1].is_mdgel if ismdgel: self.is_uniform = False return ismdgel except IndexError: ...

[ "def", "is_mdgel", "(", "self", ")", ":", "# TODO: this likely reads the second page from file", "try", ":", "ismdgel", "=", "self", ".", "pages", "[", "0", "]", ".", "is_mdgel", "or", "self", ".", "pages", "[", "1", "]", ".", "is_mdgel", "if", "ismdgel", ...

33.5

16

async def get(self, path, **query): '''return a get request Parameters ---------- path : str same as get_url query : kargs dict additional info to pass to get_url See Also -------- get_url : getJson : Returns ------- requests.models.Response the r...

[ "async", "def", "get", "(", "self", ",", "path", ",", "*", "*", "query", ")", ":", "url", "=", "self", ".", "get_url", "(", "path", ",", "*", "*", "query", ")", "for", "i", "in", "range", "(", "self", ".", "tries", "+", "1", ")", ":", "try", ...

22.058824

20.823529

def sign_execute_cancellation(cancellation_params, key_pair): """ Function to sign the parameters required to execute a cancellation request on the Switcheo Exchange. Execution of this function is as follows:: sign_execute_cancellation(cancellation_params=signable_params, key_pair=key_pair) Th...

[ "def", "sign_execute_cancellation", "(", "cancellation_params", ",", "key_pair", ")", ":", "signature", "=", "sign_transaction", "(", "transaction", "=", "cancellation_params", "[", "'transaction'", "]", ",", "private_key_hex", "=", "private_key_to_hex", "(", "key_pair"...

45.409091

30.681818

def vb_list_machines(**kwargs): ''' Which machines does the hypervisor have @param kwargs: Passed to vb_xpcom_to_attribute_dict to filter the attributes @type kwargs: dict @return: Untreated dicts of the machines known to the hypervisor @rtype: [{}] ''' manager = vb_get_manager() mac...

[ "def", "vb_list_machines", "(", "*", "*", "kwargs", ")", ":", "manager", "=", "vb_get_manager", "(", ")", "machines", "=", "manager", ".", "getArray", "(", "vb_get_box", "(", ")", ",", "'machines'", ")", "return", "[", "vb_xpcom_to_attribute_dict", "(", "mac...

34.142857

22

def cli_print(msg, color='', end=None, file=sys.stdout, logger=_LOG): """Print the message to file and also log it. This function is intended as a 'tee' mechanism to enable the CLI interface as a first-class citizen, while ensuring that everything the operator sees also has an analogous logging entry in the te...

[ "def", "cli_print", "(", "msg", ",", "color", "=", "''", ",", "end", "=", "None", ",", "file", "=", "sys", ".", "stdout", ",", "logger", "=", "_LOG", ")", ":", "if", "logger", ":", "logger", ".", "debug", "(", "'-> {}'", ".", "format", "(", "msg"...

42.96

24.08

def register_method(func, name=None, deprecated=False): """Register a method of calculating an average spectrogram. Parameters ---------- func : `callable` function to execute name : `str`, optional name of the method, defaults to ``func.__name__`` deprecated : `bool`, optiona...

[ "def", "register_method", "(", "func", ",", "name", "=", "None", ",", "deprecated", "=", "False", ")", ":", "# warn about deprecated functions", "if", "deprecated", ":", "func", "=", "deprecated_function", "(", "func", ",", "\"the {0!r} PSD methods is deprecated, and ...

27.857143

21.342857

def service_absent(name, namespace='default', **kwargs): ''' Ensures that the named service is absent from the given namespace. name The name of the service namespace The name of the namespace ''' ret = {'name': name, 'changes': {}, 'result': False, ...

[ "def", "service_absent", "(", "name", ",", "namespace", "=", "'default'", ",", "*", "*", "kwargs", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'changes'", ":", "{", "}", ",", "'result'", ":", "False", ",", "'comment'", ":", "''", "}", "...

27.307692

23.820513

def filter_nomedia(album, settings=None): """Removes all filtered Media and subdirs from an Album""" nomediapath = os.path.join(album.src_path, ".nomedia") if os.path.isfile(nomediapath): if os.path.getsize(nomediapath) == 0: logger.info("Ignoring album '%s' because of present 0-byte " ...

[ "def", "filter_nomedia", "(", "album", ",", "settings", "=", "None", ")", ":", "nomediapath", "=", "os", ".", "path", ".", "join", "(", "album", ".", "src_path", ",", "\".nomedia\"", ")", "if", "os", ".", "path", ".", "isfile", "(", "nomediapath", ")",...

42.615385

21.794872

def formatTimeFromNow(secs=0): """ Properly Format Time that is `x` seconds in the future :param int secs: Seconds to go in the future (`x>0`) or the past (`x<0`) :return: Properly formated time for Graphene (`%Y-%m-%dT%H:%M:%S`) :rtype: str """ return datetime.utcfromtimestamp(time.time() ...

[ "def", "formatTimeFromNow", "(", "secs", "=", "0", ")", ":", "return", "datetime", ".", "utcfromtimestamp", "(", "time", ".", "time", "(", ")", "+", "int", "(", "secs", ")", ")", ".", "strftime", "(", "timeformat", ")" ]

38.333333

24.888889

def mod(self, x, axis): """Function to modulo 3D View with vector or 2D array (type = numpy.ndarray or 2D Field or 2D View) or 2D View with vector (type = numpy.ndarray) :param x: array(1D, 2D) or field (2D) or View(2D) :param axis: specifies axis, eg. axis = (1,2) plane lies in yz-plane, axis=0...

[ "def", "mod", "(", "self", ",", "x", ",", "axis", ")", ":", "return", "self", ".", "__array_op", "(", "operator", ".", "mod", ",", "x", ",", "axis", ")" ]

67

19.857143

def pick_free_port(hostname=REDIRECT_HOST, port=0): """ Try to bind a port. Default=0 selects a free port. """ import socket s = socket.socket(socket.AF_INET, socket.SOCK_STREAM) try: s.bind((hostname, port)) # port=0 finds an open port except OSError as e: log.warning("Could not bi...

[ "def", "pick_free_port", "(", "hostname", "=", "REDIRECT_HOST", ",", "port", "=", "0", ")", ":", "import", "socket", "s", "=", "socket", ".", "socket", "(", "socket", ".", "AF_INET", ",", "socket", ".", "SOCK_STREAM", ")", "try", ":", "s", ".", "bind",...

37.5

18.25

def saveFileTo(self, buf, encoding): """Dump an XML document to an I/O buffer. Warning ! This call xmlOutputBufferClose() on buf which is not available after this call. """ if buf is None: buf__o = None else: buf__o = buf._o ret = libxml2mod.xmlSaveFileTo(buf__o, sel...

[ "def", "saveFileTo", "(", "self", ",", "buf", ",", "encoding", ")", ":", "if", "buf", "is", "None", ":", "buf__o", "=", "None", "else", ":", "buf__o", "=", "buf", ".", "_o", "ret", "=", "libxml2mod", ".", "xmlSaveFileTo", "(", "buf__o", ",", "self", ...

43.375

11.625

def execute(cls, stage, state, data, next_allowed_exec_time=None): """Execute the operation, rate limiting allowing.""" try: context = Context.from_state(state, stage) now = datetime.utcnow() if next_allowed_exec_time and now < next_allowed_exec_time: ...

[ "def", "execute", "(", "cls", ",", "stage", ",", "state", ",", "data", ",", "next_allowed_exec_time", "=", "None", ")", ":", "try", ":", "context", "=", "Context", ".", "from_state", "(", "state", ",", "stage", ")", "now", "=", "datetime", ".", "utcnow...

46.741935

16.419355

def header(settings): """ Writes the Latex header using the settings file. The header includes all packages and defines all tikz styles. :param dictionary settings: LaTeX settings for document. :return: Header of the LaTeX document. :rtype: string """ packages = (r"\documentclass[conve...

[ "def", "header", "(", "settings", ")", ":", "packages", "=", "(", "r\"\\documentclass[convert={density=300,outext=.png}]{standalone}\"", ",", "r\"\\usepackage[margin=1in]{geometry}\"", ",", "r\"\\usepackage[hang,small,bf]{caption}\"", ",", "r\"\\usepackage{tikz}\"", ",", "r\"\\usep...

52.537037

28.648148

def gradient_helper(optimizer, loss, var_list=None): '''A helper to get the gradients out at each step. Args: optimizer: the optimizer op. loss: the op that computes your loss value. Returns: the gradient tensors and the train_step op. ''' if var_list is None: var_list = tf.compa...

[ "def", "gradient_helper", "(", "optimizer", ",", "loss", ",", "var_list", "=", "None", ")", ":", "if", "var_list", "is", "None", ":", "var_list", "=", "tf", ".", "compat", ".", "v1", ".", "trainable_variables", "(", ")", "grads_and_vars", "=", "optimizer",...

32.25

23

def name_indel_mutation(sbjct_seq, indel, sbjct_rf_indel, qry_rf_indel, codon_no, mut, start_offset): """ This function serves to name the individual mutations dependently on the type of the mutation. """ # Get the subject and query sequences without gaps sbjct_nucs = sbjct_rf_indel.replace("-"...

[ "def", "name_indel_mutation", "(", "sbjct_seq", ",", "indel", ",", "sbjct_rf_indel", ",", "qry_rf_indel", ",", "codon_no", ",", "mut", ",", "start_offset", ")", ":", "# Get the subject and query sequences without gaps", "sbjct_nucs", "=", "sbjct_rf_indel", ".", "replace...

34.62963

22.814815

def disagg_prec(dailyData, method='equal', cascade_options=None, hourly_data_obs=None, zerodiv="uniform", shift=0): """The disaggregation function for precipitation. Parameters ---------- dailyData : pd.Series daily...

[ "def", "disagg_prec", "(", "dailyData", ",", "method", "=", "'equal'", ",", "cascade_options", "=", "None", ",", "hourly_data_obs", "=", "None", ",", "zerodiv", "=", "\"uniform\"", ",", "shift", "=", "0", ")", ":", "if", "method", "not", "in", "(", "'equ...

34.534884

17.325581

def select(*cases): """ Select the first case that becomes ready. If a default case (:class:`goless.dcase`) is present, return that if no other cases are ready. If there is no default case and no case is ready, block until one becomes ready. See Go's ``reflect.Select`` method for an analog ...

[ "def", "select", "(", "*", "cases", ")", ":", "if", "len", "(", "cases", ")", "==", "0", ":", "return", "# If the first argument is a list, it should be the only argument", "if", "isinstance", "(", "cases", "[", "0", "]", ",", "list", ")", ":", "if", "len", ...

37.924528

18.830189

def make_eventlogitem_message(message, condition='contains', negate=False, preserve_case=False): """ Create a node for EventLogItem/message :return: A IndicatorItem represented as an Element node """ document = 'EventLogItem' search = 'EventLogItem/message' content_type = 'string' c...

[ "def", "make_eventlogitem_message", "(", "message", ",", "condition", "=", "'contains'", ",", "negate", "=", "False", ",", "preserve_case", "=", "False", ")", ":", "document", "=", "'EventLogItem'", "search", "=", "'EventLogItem/message'", "content_type", "=", "'s...

40.846154

22.230769

def sparse_segment(cords): r""" Create a segment of a sparse grid. Convert a ol-index to sparse grid coordinates on ``[0, 1]^N`` hyper-cube. A sparse grid of order ``D`` coencide with the set of sparse_segments where ``||cords||_1 <= D``. More specifically, a segment of: .. math:: ...

[ "def", "sparse_segment", "(", "cords", ")", ":", "cords", "=", "np", ".", "array", "(", "cords", ")", "+", "1", "slices", "=", "[", "]", "for", "cord", "in", "cords", ":", "slices", ".", "append", "(", "slice", "(", "1", ",", "2", "**", "cord", ...

26.021277

22.510638

def send_template(self, template, to, reply_to=None, **context): """ Send Template message """ if self.provider == "SES": self.mail.send_template(template=template, to=to, reply_to=reply_to, **context) elif self.provider == "FLASK-MAIL": ses_mail = ses_mai...

[ "def", "send_template", "(", "self", ",", "template", ",", "to", ",", "reply_to", "=", "None", ",", "*", "*", "context", ")", ":", "if", "self", ".", "provider", "==", "\"SES\"", ":", "self", ".", "mail", ".", "send_template", "(", "template", "=", "...

46.117647

17.529412

def delete(self, key): '''Removes the object named by `key`. Removes the object from the collection corresponding to ``key.path``. Args: key: Key naming the object to remove. ''' try: del self._collection(key)[key] if len(self._collection(key)) == 0: del self._items[str(...

[ "def", "delete", "(", "self", ",", "key", ")", ":", "try", ":", "del", "self", ".", "_collection", "(", "key", ")", "[", "key", "]", "if", "len", "(", "self", ".", "_collection", "(", "key", ")", ")", "==", "0", ":", "del", "self", ".", "_items...

23.4

21.666667

def as_ihex(self, number_of_data_bytes=32, address_length_bits=32): """Format the binary file as Intel HEX records and return them as a string. `number_of_data_bytes` is the number of data bytes in each record. `address_length_bits` is the number of address bits in each ...

[ "def", "as_ihex", "(", "self", ",", "number_of_data_bytes", "=", "32", ",", "address_length_bits", "=", "32", ")", ":", "def", "i32hex", "(", "address", ",", "extended_linear_address", ",", "data_address", ")", ":", "if", "address", ">", "0xffffffff", ":", "...

41.017094

20.82906

def _compile(cls, lines): '''Return the filename from the current line.''' m = cls.RE_EXTEND.match(lines.current) if m is None: raise DefineBlockError('''Incorrect block definition at line {}, {} Should be something like: #extend path/foo.html:'''.format( lines.pos, l...

[ "def", "_compile", "(", "cls", ",", "lines", ")", ":", "m", "=", "cls", ".", "RE_EXTEND", ".", "match", "(", "lines", ".", "current", ")", "if", "m", "is", "None", ":", "raise", "DefineBlockError", "(", "'''Incorrect block definition at line {}, {}\nShould be ...

44.125

16.375

def dict(self): """ the python object for rendering json. It is called dict to be coherent with the other modules but it actually returns a list :return: the python object for rendering json :rtype: list """ json_list = [] for step in self.steps...

[ "def", "dict", "(", "self", ")", ":", "json_list", "=", "[", "]", "for", "step", "in", "self", ".", "steps", ":", "json_list", ".", "append", "(", "step", ".", "dict", ")", "return", "json_list" ]

24.8

17.733333

def _worker_handler(future, worker, pipe, timeout): """Worker lifecycle manager. Waits for the worker to be perform its task, collects result, runs the callback and cleans up the process. """ result = _get_result(future, pipe, timeout) if isinstance(result, BaseException): if isinstan...

[ "def", "_worker_handler", "(", "future", ",", "worker", ",", "pipe", ",", "timeout", ")", ":", "result", "=", "_get_result", "(", "future", ",", "pipe", ",", "timeout", ")", "if", "isinstance", "(", "result", ",", "BaseException", ")", ":", "if", "isinst...

27

17.473684

def get_response(self, request): '''Returns the redirect response for this exception.''' # the redirect key is already placed in the response by HttpResponseJavascriptRedirect return HttpResponseJavascriptRedirect(self.redirect_to, *self.args, **self.kwargs)

[ "def", "get_response", "(", "self", ",", "request", ")", ":", "# the redirect key is already placed in the response by HttpResponseJavascriptRedirect", "return", "HttpResponseJavascriptRedirect", "(", "self", ".", "redirect_to", ",", "*", "self", ".", "args", ",", "*", "*...

69.75

33.75

def Tautoignition(CASRN, AvailableMethods=False, Method=None): r'''This function handles the retrieval or calculation of a chemical's autoifnition temperature. Lookup is based on CASRNs. No predictive methods are currently implemented. Will automatically select a data source to use if no Method is provi...

[ "def", "Tautoignition", "(", "CASRN", ",", "AvailableMethods", "=", "False", ",", "Method", "=", "None", ")", ":", "def", "list_methods", "(", ")", ":", "methods", "=", "[", "]", "if", "CASRN", "in", "IEC_2010", ".", "index", "and", "not", "np", ".", ...

35.084507

25.056338

def span(self, name='child_span'): """Create a child span for the current span and append it to the child spans list. :type name: str :param name: (Optional) The name of the child span. :rtype: :class: `~opencensus.trace.blankspan.BlankSpan` :returns: A child Span to be...

[ "def", "span", "(", "self", ",", "name", "=", "'child_span'", ")", ":", "child_span", "=", "BlankSpan", "(", "name", ",", "parent_span", "=", "self", ")", "self", ".", "_child_spans", ".", "append", "(", "child_span", ")", "return", "child_span" ]

36.384615

17.076923

def _lease_valid(self, lease): """ Check if the given lease exist and still has a prefix that owns it. If the lease exist but its prefix isn't, remove the lease from this store. Args: lease (lago.subnet_lease.Lease): Object representation of the lease...

[ "def", "_lease_valid", "(", "self", ",", "lease", ")", ":", "if", "not", "lease", ".", "exist", ":", "return", "None", "if", "lease", ".", "has_env", ":", "return", "lease", ".", "uuid_path", "else", ":", "self", ".", "_release", "(", "lease", ")", "...

29.636364

22.181818

def arguments(): """Pulls in command line arguments.""" DESCRIPTION = """\ """ parser = argparse.ArgumentParser(description=DESCRIPTION, formatter_class=Raw) parser.add_argument("--email", dest="email", action='store', required=False, default=False, help="An email address ...

[ "def", "arguments", "(", ")", ":", "DESCRIPTION", "=", "\"\"\"\\\n \"\"\"", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "DESCRIPTION", ",", "formatter_class", "=", "Raw", ")", "parser", ".", "add_argument", "(", "\"--email\"", "...

40.897436

32.974359

def COH(self): """Coherence. .. math:: \mathrm{COH}_{ij}(f) = \\frac{S_{ij}(f)} {\sqrt{S_{ii}(f) S_{jj}(f)}} References ---------- P. L. Nunez, R. Srinivasan, A. F. Westdorp, R. S. Wijesinghe, D. M. Tucker, R. B. Silverstei...

[ "def", "COH", "(", "self", ")", ":", "S", "=", "self", ".", "S", "(", ")", "# TODO: can we do that more efficiently?", "return", "S", "/", "np", ".", "sqrt", "(", "np", ".", "einsum", "(", "'ii..., jj... ->ij...'", ",", "S", ",", "S", ".", "conj", "(",...

41.058824

23.882353

def getdrawings(): """Get all the drawings.""" infos = Info.query.all() sketches = [json.loads(info.contents) for info in infos] return jsonify(drawings=sketches)

[ "def", "getdrawings", "(", ")", ":", "infos", "=", "Info", ".", "query", ".", "all", "(", ")", "sketches", "=", "[", "json", ".", "loads", "(", "info", ".", "contents", ")", "for", "info", "in", "infos", "]", "return", "jsonify", "(", "drawings", "...

34.8

11.4

def sendEmoji( self, emoji=None, size=EmojiSize.SMALL, thread_id=None, thread_type=ThreadType.USER, ): """ Deprecated. Use :func:`fbchat.Client.send` instead """ return self.send( Message(text=emoji, emoji_size=size), th...

[ "def", "sendEmoji", "(", "self", ",", "emoji", "=", "None", ",", "size", "=", "EmojiSize", ".", "SMALL", ",", "thread_id", "=", "None", ",", "thread_type", "=", "ThreadType", ".", "USER", ",", ")", ":", "return", "self", ".", "send", "(", "Message", ...

24.733333

15

def _parse_kick(client, command, actor, args): """Parse a KICK and update channel states, then dispatch events. Note that two events are dispatched here: - KICK, because a user was kicked from the channel - MEMBERS, because the channel's members changed """ actor = User(actor) args,...

[ "def", "_parse_kick", "(", "client", ",", "command", ",", "actor", ",", "args", ")", ":", "actor", "=", "User", "(", "actor", ")", "args", ",", "_", ",", "message", "=", "args", ".", "partition", "(", "' :'", ")", "channel", ",", "target", "=", "ar...

39.941176

10.588235

def get_html_theme_path(): """ Get the absolute path of the directory containing the theme files. """ return os.path.abspath(os.path.dirname(os.path.dirname(__file__)))

[ "def", "get_html_theme_path", "(", ")", ":", "return", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "dirname", "(", "os", ".", "path", ".", "dirname", "(", "__file__", ")", ")", ")" ]

36

14.8

def clean_up(self): """Do clean-up before returning buffer""" self.action_buffer = [] self.sources = {} self.doc_to_get = {} self.doc_to_update = []

[ "def", "clean_up", "(", "self", ")", ":", "self", ".", "action_buffer", "=", "[", "]", "self", ".", "sources", "=", "{", "}", "self", ".", "doc_to_get", "=", "{", "}", "self", ".", "doc_to_update", "=", "[", "]" ]

30.5

11

def capacity_sp_meyerhof_and_hanna_1978(sp, fd, verbose=0): """ Calculates the two-layered foundation capacity according Meyerhof and Hanna (1978) :param sp: Soil profile object :param fd: Foundation object :param wtl: water table level :param verbose: verbosity :return: ultimate bearing st...

[ "def", "capacity_sp_meyerhof_and_hanna_1978", "(", "sp", ",", "fd", ",", "verbose", "=", "0", ")", ":", "assert", "isinstance", "(", "sp", ",", "sm", ".", "SoilProfile", ")", "sl_0", "=", "sp", ".", "layer", "(", "1", ")", "sl_1", "=", "sp", ".", "la...

43.55

27.773077

async def fetch_guild(self, guild_id): """|coro| Retrieves a :class:`.Guild` from an ID. .. note:: Using this, you will not receive :attr:`.Guild.channels`, :class:`.Guild.members`, :attr:`.Member.activity` and :attr:`.Member.voice` per :class:`.Member`. .. no...

[ "async", "def", "fetch_guild", "(", "self", ",", "guild_id", ")", ":", "data", "=", "await", "self", ".", "http", ".", "get_guild", "(", "guild_id", ")", "return", "Guild", "(", "data", "=", "data", ",", "state", "=", "self", ".", "_connection", ")" ]

26.393939

23.727273

def attribute(func): """Wrap a function as an attribute.""" attr = abc.abstractmethod(func) attr.__iattribute__ = True attr = _property(attr) return attr

[ "def", "attribute", "(", "func", ")", ":", "attr", "=", "abc", ".", "abstractmethod", "(", "func", ")", "attr", ".", "__iattribute__", "=", "True", "attr", "=", "_property", "(", "attr", ")", "return", "attr" ]

28

12.333333

def evidence_from_inversion_terms(chi_squared, regularization_term, log_curvature_regularization_term, log_regularization_term, noise_normalization): """Compute the evidence of an inversion's fit to the datas, where the evidence includes a number of \ terms which quantify the c...

[ "def", "evidence_from_inversion_terms", "(", "chi_squared", ",", "regularization_term", ",", "log_curvature_regularization_term", ",", "log_regularization_term", ",", "noise_normalization", ")", ":", "return", "-", "0.5", "*", "(", "chi_squared", "+", "regularization_term",...

58.25

31.25

def p_InterfaceDefList(p): ''' InterfaceDefList : InterfaceDef | InterfaceDefList InterfaceDef ''' if len(p) < 3: p[0] = InterfaceDefList(None, p[1]) else: p[0] = InterfaceDefList(p[1], p[2])

[ "def", "p_InterfaceDefList", "(", "p", ")", ":", "if", "len", "(", "p", ")", "<", "3", ":", "p", "[", "0", "]", "=", "InterfaceDefList", "(", "None", ",", "p", "[", "1", "]", ")", "else", ":", "p", "[", "0", "]", "=", "InterfaceDefList", "(", ...

26.666667

17.333333

def prompt_update_all(config: 'Config'): """Prompt each field of the configuration to the user.""" click.echo() click.echo('Welcome !') click.echo('Press enter to keep the defaults or enter a new value to update the configuration.') click.echo('Press Ctrl+C at any time to quit and save') click....

[ "def", "prompt_update_all", "(", "config", ":", "'Config'", ")", ":", "click", ".", "echo", "(", ")", "click", ".", "echo", "(", "'Welcome !'", ")", "click", ".", "echo", "(", "'Press enter to keep the defaults or enter a new value to update the configuration.'", ")",...

36.931818

24.227273

def _dispatch(self, cmd, args): """Attempt to run the given command with the given arguments """ if cmd in self.clis: extern_cmd, args = args[0], args[1:] self.clis[cmd]._dispatch(extern_cmd, args) else: if cmd in self.cmds: callback, p...

[ "def", "_dispatch", "(", "self", ",", "cmd", ",", "args", ")", ":", "if", "cmd", "in", "self", ".", "clis", ":", "extern_cmd", ",", "args", "=", "args", "[", "0", "]", ",", "args", "[", "1", ":", "]", "self", ".", "clis", "[", "cmd", "]", "."...

38.375

13.3125

def trigger_show_by_trigger_name(self, trigger_name, **kwargs): "https://developer.zendesk.com/rest_api/docs/chat/triggers#get-a-trigger" api_path = "/api/v2/triggers/{trigger_name}" api_path = api_path.format(trigger_name=trigger_name) return self.call(api_path, **kwargs)

[ "def", "trigger_show_by_trigger_name", "(", "self", ",", "trigger_name", ",", "*", "*", "kwargs", ")", ":", "api_path", "=", "\"/api/v2/triggers/{trigger_name}\"", "api_path", "=", "api_path", ".", "format", "(", "trigger_name", "=", "trigger_name", ")", "return", ...

60.2

20.2

def bias_abs(sim=None, obs=None, node=None, skip_nan=False): """Calculate the absolute difference between the means of the simulated and the observed values. >>> from hydpy import round_ >>> from hydpy import bias_abs >>> round_(bias_abs(sim=[2.0, 2.0, 2.0], obs=[1.0, 2.0, 3.0])) 0.0 >>> ro...

[ "def", "bias_abs", "(", "sim", "=", "None", ",", "obs", "=", "None", ",", "node", "=", "None", ",", "skip_nan", "=", "False", ")", ":", "sim", ",", "obs", "=", "prepare_arrays", "(", "sim", ",", "obs", ",", "node", ",", "skip_nan", ")", "return", ...

36.833333

20.5

def _data(self): """A simpler version of data to avoid infinite recursion in some cases. Don't use this. """ if self.is_caching: return self.cache with open(self.path, "r") as f: return json.load(f)

[ "def", "_data", "(", "self", ")", ":", "if", "self", ".", "is_caching", ":", "return", "self", ".", "cache", "with", "open", "(", "self", ".", "path", ",", "\"r\"", ")", "as", "f", ":", "return", "json", ".", "load", "(", "f", ")" ]

28.333333

12.777778

def transform_with(self, estimator, out_ds, fmt=None): """Call the partial_transform method of the estimator on this dataset Parameters ---------- estimator : object with ``partial_fit`` method This object will be used to transform this dataset into a new dataset...

[ "def", "transform_with", "(", "self", ",", "estimator", ",", "out_ds", ",", "fmt", "=", "None", ")", ":", "if", "isinstance", "(", "out_ds", ",", "str", ")", ":", "out_ds", "=", "self", ".", "create_derived", "(", "out_ds", ",", "fmt", "=", "fmt", ")...

39.354839

19.096774

def derivatives(self, x, y, n_sersic, R_sersic, k_eff, center_x=0, center_y=0): """ returns df/dx and df/dy of the function """ x_ = x - center_x y_ = y - center_y r = np.sqrt(x_**2 + y_**2) if isinstance(r, int) or isinstance(r, float): r = max(self._...

[ "def", "derivatives", "(", "self", ",", "x", ",", "y", ",", "n_sersic", ",", "R_sersic", ",", "k_eff", ",", "center_x", "=", "0", ",", "center_y", "=", "0", ")", ":", "x_", "=", "x", "-", "center_x", "y_", "=", "y", "-", "center_y", "r", "=", "...

35.266667

14.733333

def list_namespaces(): '''Print out a listing of available namespaces''' print('{:30s}\t{:40s}'.format('NAME', 'DESCRIPTION')) print('-' * 78) for sch in sorted(__NAMESPACE__): desc = __NAMESPACE__[sch]['description'] desc = (desc[:44] + '..') if len(desc) > 46 else desc print('{...

[ "def", "list_namespaces", "(", ")", ":", "print", "(", "'{:30s}\\t{:40s}'", ".", "format", "(", "'NAME'", ",", "'DESCRIPTION'", ")", ")", "print", "(", "'-'", "*", "78", ")", "for", "sch", "in", "sorted", "(", "__NAMESPACE__", ")", ":", "desc", "=", "_...

43.25

13.75

def dissolve(collection, aggfunc=None): # type: (BaseCollection, Optional[Callable[[list], Any]]) -> GeoFeature """Dissolves features contained in a FeatureCollection and applies an aggregation function to its properties. """ new_properties = {} if aggfunc: temp_properties = defaultdict...

[ "def", "dissolve", "(", "collection", ",", "aggfunc", "=", "None", ")", ":", "# type: (BaseCollection, Optional[Callable[[list], Any]]) -> GeoFeature", "new_properties", "=", "{", "}", "if", "aggfunc", ":", "temp_properties", "=", "defaultdict", "(", "list", ")", "# t...

35.136364

19.409091

async def query_presence(self, query_presence_request): """Return presence status for a list of users.""" response = hangouts_pb2.QueryPresenceResponse() await self._pb_request('presence/querypresence', query_presence_request, response) return response

[ "async", "def", "query_presence", "(", "self", ",", "query_presence_request", ")", ":", "response", "=", "hangouts_pb2", ".", "QueryPresenceResponse", "(", ")", "await", "self", ".", "_pb_request", "(", "'presence/querypresence'", ",", "query_presence_request", ",", ...

51.666667

14.5

def markdown_toclify(input_file, output_file=None, github=False, back_to_top=False, nolink=False, no_toc_header=False, spacer=0, placeholder=None, exclude_h=None, remove_dashes=False): """ Function to add table of contents to markdown files. Parame...

[ "def", "markdown_toclify", "(", "input_file", ",", "output_file", "=", "None", ",", "github", "=", "False", ",", "back_to_top", "=", "False", ",", "nolink", "=", "False", ",", "no_toc_header", "=", "False", ",", "spacer", "=", "0", ",", "placeholder", "=",...

36

20.808219