kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def prepare_to_run(self, clock, period_count): """ Prepare the entity for execution. :param clock: The clock containing the execution start time and execution period information. :param period_count: The total amount of periods this activity will be requested to be r...	[ "def", "prepare_to_run", "(", "self", ",", "clock", ",", "period_count", ")", ":", "self", ".", "period_count", "=", "period_count", "self", ".", "_exec_year_end_datetime", "=", "clock", ".", "get_datetime_at_period_ix", "(", "period_count", ")", "self", ".", "_...	32.72	18.8
def concat_multiple_inputs(data, sample): """ If multiple fastq files were appended into the list of fastqs for samples then we merge them here before proceeding. """ ## if more than one tuple in fastq list if len(sample.files.fastqs) > 1: ## create a cat command to append them all (d...	[ "def", "concat_multiple_inputs", "(", "data", ",", "sample", ")", ":", "## if more than one tuple in fastq list", "if", "len", "(", "sample", ".", "files", ".", "fastqs", ")", ">", "1", ":", "## create a cat command to append them all (doesn't matter if they ", "## are gz...	44.564103	21.769231
def deps(ctx): '''Install or update development dependencies''' header(deps.__doc__) with ctx.cd(ROOT): ctx.run('pip install -r requirements/develop.pip -r requirements/doc.pip', pty=True)	[ "def", "deps", "(", "ctx", ")", ":", "header", "(", "deps", ".", "__doc__", ")", "with", "ctx", ".", "cd", "(", "ROOT", ")", ":", "ctx", ".", "run", "(", "'pip install -r requirements/develop.pip -r requirements/doc.pip'", ",", "pty", "=", "True", ")" ]	40.8	24.8
def check(self): """ Run the setting checker against the setting raw value. Raises: AttributeError: if the setting is missing and required. ValueError: (or other Exception) if the raw value is invalid. """ super(NestedSetting, self).check() errors...	[ "def", "check", "(", "self", ")", ":", "super", "(", "NestedSetting", ",", "self", ")", ".", "check", "(", ")", "errors", "=", "[", "]", "for", "subsetting", "in", "self", ".", "settings", ".", "values", "(", ")", ":", "try", ":", "subsetting", "."...	33.117647	15.588235
def quit(self): '''Quit fetcher''' self._running = False self._quit = True self.ioloop.add_callback(self.ioloop.stop) if hasattr(self, 'xmlrpc_server'): self.xmlrpc_ioloop.add_callback(self.xmlrpc_server.stop) self.xmlrpc_ioloop.add_callback(self.xmlrpc_io...	[ "def", "quit", "(", "self", ")", ":", "self", ".", "_running", "=", "False", "self", ".", "_quit", "=", "True", "self", ".", "ioloop", ".", "add_callback", "(", "self", ".", "ioloop", ".", "stop", ")", "if", "hasattr", "(", "self", ",", "'xmlrpc_serv...	40.375	16.625
def insert(self, rectangle): """ Insert a rectangle into the bin. Parameters ------------- rectangle: (2,) float, size of rectangle to insert """ rectangle = np.asanyarray(rectangle, dtype=np.float64) for child in self.child: if child is not ...	[ "def", "insert", "(", "self", ",", "rectangle", ")", ":", "rectangle", "=", "np", ".", "asanyarray", "(", "rectangle", ",", "dtype", "=", "np", ".", "float64", ")", "for", "child", "in", "self", ".", "child", ":", "if", "child", "is", "not", "None", ...	34.659574	18.914894
def add_result(self, job): """Adds a job run result to the history table. :param dict job: The job dictionary :returns: True """ self.cur.execute( "INSERT INTO history VALUES(?,?,?,?)", (job["id"], job["description"], job["last-run"], job["last-run-result"...	[ "def", "add_result", "(", "self", ",", "job", ")", ":", "self", ".", "cur", ".", "execute", "(", "\"INSERT INTO history VALUES(?,?,?,?)\"", ",", "(", "job", "[", "\"id\"", "]", ",", "job", "[", "\"description\"", "]", ",", "job", "[", "\"last-run\"", "]", ...	33.5	16.6
def use_args( self, argmap, req=None, locations=None, as_kwargs=False, validate=None, error_status_code=None, error_headers=None, ): """Decorator that injects parsed arguments into a view function or method. Example usage with Flask: :...	[ "def", "use_args", "(", "self", ",", "argmap", ",", "req", "=", "None", ",", "locations", "=", "None", ",", "as_kwargs", "=", "False", ",", "validate", "=", "None", ",", "error_status_code", "=", "None", ",", "error_headers", "=", "None", ",", ")", ":"...	38.565217	19.275362
def cleanup(self): """ Release resources used by supporting classes """ try: self.unload_lime() except AttributeError as ex: pass self.tunnel.cleanup() self.shell.cleanup()	[ "def", "cleanup", "(", "self", ")", ":", "try", ":", "self", ".", "unload_lime", "(", ")", "except", "AttributeError", "as", "ex", ":", "pass", "self", ".", "tunnel", ".", "cleanup", "(", ")", "self", ".", "shell", ".", "cleanup", "(", ")" ]	24.3	12.3
def symlink(source, destination): """Create a symbolic link""" log("Symlinking {} as {}".format(source, destination)) cmd = [ 'ln', '-sf', source, destination, ] subprocess.check_call(cmd)	[ "def", "symlink", "(", "source", ",", "destination", ")", ":", "log", "(", "\"Symlinking {} as {}\"", ".", "format", "(", "source", ",", "destination", ")", ")", "cmd", "=", "[", "'ln'", ",", "'-sf'", ",", "source", ",", "destination", ",", "]", "subproc...	23.1	19.7
def rldecode(data): """ RunLength decoder (Adobe version) implementation based on PDF Reference version 1.4 section 3.3.4: The RunLengthDecode filter decodes data that has been encoded in a simple byte-oriented format based on run length. The encoded data is a sequence of runs, where...	[ "def", "rldecode", "(", "data", ")", ":", "decoded", "=", "[", "]", "i", "=", "0", "while", "i", "<", "len", "(", "data", ")", ":", "#print 'data[%d]=:%d:' % (i,ord(data[i]))", "length", "=", "ord", "(", "data", "[", "i", "]", ")", "if", "length", "=...	39.971429	17.571429
def set_level(self, level=1): """Set the logging level Parameters ---------- level : `int` or `bool` (optional, default: 1) If False or 0, prints WARNING and higher messages. If True or 1, prints INFO and higher messages. If 2 or higher, prints all me...	[ "def", "set_level", "(", "self", ",", "level", "=", "1", ")", ":", "if", "level", "is", "True", "or", "level", "==", "1", ":", "level", "=", "logging", ".", "INFO", "level_name", "=", "\"INFO\"", "elif", "level", "is", "False", "or", "level", "<=", ...	35.393939	11.848485
def get_all_files(root, followlinks=False): """ Get all files within the given root directory. Note that this list is not ordered. Parameters ---------- root : str Path to a directory followlinks : bool, optional (default: False) Returns ------- filepaths : list ...	[ "def", "get_all_files", "(", "root", ",", "followlinks", "=", "False", ")", ":", "filepaths", "=", "[", "]", "for", "path", ",", "_", ",", "files", "in", "os", ".", "walk", "(", "root", ",", "followlinks", "=", "followlinks", ")", ":", "for", "name",...	24.772727	19.318182
def delete(self): ''' Deletes link from vault and removes database information ''' if not self._id: verbose('This target does not have an id') return False # Removes link from vault directory verbose('Removing link from vault directory') ...	[ "def", "delete", "(", "self", ")", ":", "if", "not", "self", ".", "_id", ":", "verbose", "(", "'This target does not have an id'", ")", "return", "False", "# Removes link from vault directory", "verbose", "(", "'Removing link from vault directory'", ")", "os", ".", ...	28.611111	19.722222
def path(self, var, default=NOTSET, kwargs): """ :rtype: Path """ return Path(self.get_value(var, default=default), kwargs)	[ "def", "path", "(", "self", ",", "var", ",", "default", "=", "NOTSET", ",", "", "", "kwargs", ")", ":", "return", "Path", "(", "self", ".", "get_value", "(", "var", ",", "default", "=", "default", ")", ",", "", "", "kwargs", ")" ]	31	10.6
def zoom_out(self): """Zoom the view out one zoom step. """ viewer = self.getfocus_viewer() if hasattr(viewer, 'zoom_out'): viewer.zoom_out() return True	[ "def", "zoom_out", "(", "self", ")", ":", "viewer", "=", "self", ".", "getfocus_viewer", "(", ")", "if", "hasattr", "(", "viewer", ",", "'zoom_out'", ")", ":", "viewer", ".", "zoom_out", "(", ")", "return", "True" ]	28.428571	7.857143
def training_job_summaries(self, force_refresh=False): """A (paginated) list of everything from ``ListTrainingJobsForTuningJob``. Args: force_refresh (bool): Set to True to fetch the latest data from SageMaker API. Returns: dict: The Amazon SageMaker response for ``List...	[ "def", "training_job_summaries", "(", "self", ",", "force_refresh", "=", "False", ")", ":", "if", "force_refresh", ":", "self", ".", "clear_cache", "(", ")", "if", "self", ".", "_training_job_summaries", "is", "not", "None", ":", "return", "self", ".", "_tra...	44.827586	24.655172
def combine_counts( fns, define_sample_name=None, ): """ Combine featureCounts output files for multiple samples. Parameters ---------- fns : list of strings Filenames of featureCounts output files to combine. define_sample_name : function A function mapping the featur...	[ "def", "combine_counts", "(", "fns", ",", "define_sample_name", "=", "None", ",", ")", ":", "counts", "=", "[", "]", "for", "fn", "in", "fns", ":", "df", "=", "pd", ".", "read_table", "(", "fn", ",", "skiprows", "=", "1", ",", "index_col", "=", "0"...	28.424242	19.212121
def create_header(self, service_id, version_number, name, destination, source, _type=FastlyHeaderType.RESPONSE, action=FastlyHeaderAction.SET, regex=None, substitution=None, ignore_if_set=None, priority=10, response_condition=None, cache_condition=None, request_condition=None): body = self._formdata({ "name": name...	[ "def", "create_header", "(", "self", ",", "service_id", ",", "version_number", ",", "name", ",", "destination", ",", "source", ",", "_type", "=", "FastlyHeaderType", ".", "RESPONSE", ",", "action", "=", "FastlyHeaderAction", ".", "SET", ",", "regex", "=", "N...	46.5	28.5
async def arun_process(path: Union[Path, str], target: Callable, *, args: Tuple[Any]=(), kwargs: Dict[str, Any]=None, callback: Callable[[Set[Tuple[Change, str]]], Awaitable]=None, watcher_cls: Type[AllWatcher]=PythonWatcher, ...	[ "async", "def", "arun_process", "(", "path", ":", "Union", "[", "Path", ",", "str", "]", ",", "target", ":", "Callable", ",", "*", ",", "args", ":", "Tuple", "[", "Any", "]", "=", "(", ")", ",", "kwargs", ":", "Dict", "[", "str", ",", "Any", "]...	47.333333	21.904762
def do_diff(self, params): """ \x1b[1mNAME\x1b[0m diff - Display the differences between two paths \x1b[1mSYNOPSIS\x1b[0m diff <src> <dst> \x1b[1mDESCRIPTION\x1b[0m The output is interpreted as: -- means the znode is missing in /new-configs ++ means the znode is new...	[ "def", "do_diff", "(", "self", ",", "params", ")", ":", "count", "=", "0", "for", "count", ",", "(", "diff", ",", "path", ")", "in", "enumerate", "(", "self", ".", "_zk", ".", "diff", "(", "params", ".", "path_a", ",", "params", ".", "path_b", ")...	30.03125	18.53125
def create_from_assocs(self, assocs, **args): """ Creates from a list of association objects """ amap = defaultdict(list) subject_label_map = {} for a in assocs: subj = a['subject'] subj_id = subj['id'] subj_label = subj['label'] ...	[ "def", "create_from_assocs", "(", "self", ",", "assocs", ",", "", "", "args", ")", ":", "amap", "=", "defaultdict", "(", "list", ")", "subject_label_map", "=", "{", "}", "for", "a", "in", "assocs", ":", "subj", "=", "a", "[", "'subject'", "]", "sub...	37.125	14.625
def SGg(self): r'''Specific gravity of the gas phase of the chemical, [dimensionless]. The reference condition is air at 15.6 °C (60 °F) and 1 atm (rho=1.223 kg/m^3). The definition for gases uses the compressibility factor of the reference gas and the chemical both at the reference ...	[ "def", "SGg", "(", "self", ")", ":", "Vmg", "=", "self", ".", "VolumeGas", "(", "T", "=", "288.70555555555552", ",", "P", "=", "101325", ")", "if", "Vmg", ":", "rho", "=", "Vm_to_rho", "(", "Vmg", ",", "self", ".", "MW", ")", "return", "SG", "(",...	40.941176	24.235294
def from_sas_token(cls, address, sas_token, eventhub=None, **kwargs): """Create an EventHubClient from an existing auth token or token generator. :param address: The Event Hub address URL :type address: str :param sas_token: A SAS token or function that returns a SAS token. If a functio...	[ "def", "from_sas_token", "(", "cls", ",", "address", ",", "sas_token", ",", "eventhub", "=", "None", ",", "", "", "kwargs", ")", ":", "address", "=", "_build_uri", "(", "address", ",", "eventhub", ")", "return", "cls", "(", "address", ",", "sas_token",...	57.625	27.375
def macros_update_many(self, data, kwargs): "https://developer.zendesk.com/rest_api/docs/core/macros#update-many-macros" api_path = "/api/v2/macros/update_many.json" return self.call(api_path, method="PUT", data=data, kwargs)	[ "def", "macros_update_many", "(", "self", ",", "data", ",", "", "", "kwargs", ")", ":", "api_path", "=", "\"/api/v2/macros/update_many.json\"", "return", "self", ".", "call", "(", "api_path", ",", "method", "=", "\"PUT\"", ",", "data", "=", "data", ",", ...	62.5	22.5
def create(self, domain_name, friendly_name=values.unset, voice_url=values.unset, voice_method=values.unset, voice_fallback_url=values.unset, voice_fallback_method=values.unset, voice_status_callback_url=values.unset, voice_status_callback_method=values.unset,...	[ "def", "create", "(", "self", ",", "domain_name", ",", "friendly_name", "=", "values", ".", "unset", ",", "voice_url", "=", "values", ".", "unset", ",", "voice_method", "=", "values", ".", "unset", ",", "voice_fallback_url", "=", "values", ".", "unset", ",...	49.292683	25.634146
def query_trial(request): """Rest API to query the trial info, with the given trial_id. The url pattern should be like this: curl http://<server>:<port>/query_trial?trial_id=<trial_id> The response may be: { "app_url": "None", "trial_status": "TERMINATED", "params": {'a':...	[ "def", "query_trial", "(", "request", ")", ":", "trial_id", "=", "request", ".", "GET", ".", "get", "(", "\"trial_id\"", ")", "trials", "=", "TrialRecord", ".", "objects", ".", "filter", "(", "trial_id", "=", "trial_id", ")", ".", "order_by", "(", "\"-st...	30.054054	14.324324
def padded_sequence_accuracy(logits, labels): """Percentage of times that predictions matches labels everywhere (non-0).""" with tf.variable_scope("padded_sequence_accuracy", values=[logits, labels]): logits, labels = _pad_tensors_to_same_length(logits, labels) weights = tf.to_float(tf.not_equal(labels, 0))...	[ "def", "padded_sequence_accuracy", "(", "logits", ",", "labels", ")", ":", "with", "tf", ".", "variable_scope", "(", "\"padded_sequence_accuracy\"", ",", "values", "=", "[", "logits", ",", "labels", "]", ")", ":", "logits", ",", "labels", "=", "_pad_tensors_to...	59.454545	16.090909
def make_reply(self): """ Creates a copy of the message, exchanging sender and receiver Returns: spade.message.Message: a new message with exchanged sender and receiver """ return Message( to=str(self.sender), sender=str(self.to), b...	[ "def", "make_reply", "(", "self", ")", ":", "return", "Message", "(", "to", "=", "str", "(", "self", ".", "sender", ")", ",", "sender", "=", "str", "(", "self", ".", "to", ")", ",", "body", "=", "self", ".", "body", ",", "thread", "=", "self", ...	26.466667	19
def p_sens_level(self, p): 'senslist : AT levelsig' p[0] = SensList((p[2],), lineno=p.lineno(1)) p.set_lineno(0, p.lineno(1))	[ "def", "p_sens_level", "(", "self", ",", "p", ")", ":", "p", "[", "0", "]", "=", "SensList", "(", "(", "p", "[", "2", "]", ",", ")", ",", "lineno", "=", "p", ".", "lineno", "(", "1", ")", ")", "p", ".", "set_lineno", "(", "0", ",", "p", "...	36.5	9.5
def inverted(self): ''' Return a version of this instance with inputs replaced by outputs and vice versa. ''' return Instance(input=self.output, output=self.input, annotated_input=self.annotated_output, annotated_output=self.annotated_input...	[ "def", "inverted", "(", "self", ")", ":", "return", "Instance", "(", "input", "=", "self", ".", "output", ",", "output", "=", "self", ".", "input", ",", "annotated_input", "=", "self", ".", "annotated_output", ",", "annotated_output", "=", "self", ".", "...	46.2	22
def validateObjectPath(p): """ Ensures that the provided object path conforms to the DBus standard. Throws a L{error.MarshallingError} if non-conformant @type p: C{string} @param p: A DBus object path """ if not p.startswith('/'): raise MarshallingError('Object paths must begin with...	[ "def", "validateObjectPath", "(", "p", ")", ":", "if", "not", "p", ".", "startswith", "(", "'/'", ")", ":", "raise", "MarshallingError", "(", "'Object paths must begin with a \"/\"'", ")", "if", "len", "(", "p", ")", ">", "1", "and", "p", "[", "-", "1", ...	38.875	18.25
def __gen_rel_anno_file(self, top_level_layer): """ A rel annotation file contains edge (rel) attributes. It is e.g. used to annotate the type of a dependency relation (subj, obj etc.). See also: __gen_hierarchy_file() """ paula_id = '{0}.{1}.{2}_{3}_rel'.format(...	[ "def", "__gen_rel_anno_file", "(", "self", ",", "top_level_layer", ")", ":", "paula_id", "=", "'{0}.{1}.{2}_{3}_rel'", ".", "format", "(", "top_level_layer", ",", "self", ".", "corpus_name", ",", "self", ".", "name", ",", "top_level_layer", ")", "E", ",", "tre...	46.695652	18.913043
def plot_heatmap( self, rank="auto", normalize="auto", top_n="auto", threshold="auto", title=None, xlabel=None, ylabel=None, tooltip=None, return_chart=False, linkage="average", haxis=None, metric="euclidean", ...	[ "def", "plot_heatmap", "(", "self", ",", "rank", "=", "\"auto\"", ",", "normalize", "=", "\"auto\"", ",", "top_n", "=", "\"auto\"", ",", "threshold", "=", "\"auto\"", ",", "title", "=", "None", ",", "xlabel", "=", "None", ",", "ylabel", "=", "None", ",...	39.130282	24.59507
def clized_default_shorts(p1, p2, first_option='default_value', second_option=5, third_option=[4, 3], last_option=False): """Help docstring """ print('%s %s %s %s %s %s' % (p1, p2, first_option, second_op...	[ "def", "clized_default_shorts", "(", "p1", ",", "p2", ",", "first_option", "=", "'default_value'", ",", "second_option", "=", "5", ",", "third_option", "=", "[", "4", ",", "3", "]", ",", "last_option", "=", "False", ")", ":", "print", "(", "'%s %s %s %s %s...	43.25	11.5
def generate_random(self, bits_len=None): """Generates a random value. :param int bits_len: :rtype: int """ bits_len = bits_len or self._bits_random return random().getrandbits(bits_len)	[ "def", "generate_random", "(", "self", ",", "bits_len", "=", "None", ")", ":", "bits_len", "=", "bits_len", "or", "self", ".", "_bits_random", "return", "random", "(", ")", ".", "getrandbits", "(", "bits_len", ")" ]	28.5	10.875
def print_big_dir_and_big_file(self, top_n=5): """Print ``top_n`` big dir and ``top_n`` big file in each dir. """ self.assert_is_dir_and_exists() size_table1 = sorted( [(p, p.dirsize) for p in self.select_dir(recursive=False)], key=lambda x: x[1], rev...	[ "def", "print_big_dir_and_big_file", "(", "self", ",", "top_n", "=", "5", ")", ":", "self", ".", "assert_is_dir_and_exists", "(", ")", "size_table1", "=", "sorted", "(", "[", "(", "p", ",", "p", ".", "dirsize", ")", "for", "p", "in", "self", ".", "sele...	39.35	15
def _get_all_resourcescenarios(network_id, user_id): """ Get all the resource scenarios in a network, across all scenarios returns a dictionary of dict objects, keyed on scenario_id """ rs_qry = db.DBSession.query( Dataset.type, Dataset.unit_id, ...	[ "def", "_get_all_resourcescenarios", "(", "network_id", ",", "user_id", ")", ":", "rs_qry", "=", "db", ".", "DBSession", ".", "query", "(", "Dataset", ".", "type", ",", "Dataset", ".", "unit_id", ",", "Dataset", ".", "name", ",", "Dataset", ".", "hash", ...	34.892308	18.092308
def _cellMask(self, index): """ Returns the data mask of the cell at the index (without any string conversion) """ row = index.row() col = index.column() if (row < 0 or row >= self.rowCount() or col < 0 or col >= self.columnCount()): return None # The check a...	[ "def", "_cellMask", "(", "self", ",", "index", ")", ":", "row", "=", "index", ".", "row", "(", ")", "col", "=", "index", ".", "column", "(", ")", "if", "(", "row", "<", "0", "or", "row", ">=", "self", ".", "rowCount", "(", ")", "or", "col", "...	40.088235	21.352941
def load_user_options(self): """Load user options from self.user_options dict This can be set via POST to the API or via options_from_form Only supported argument by default is 'profile'. Override in subclasses to support other options. """ if self._profile_list is None...	[ "def", "load_user_options", "(", "self", ")", ":", "if", "self", ".", "_profile_list", "is", "None", ":", "if", "callable", "(", "self", ".", "profile_list", ")", ":", "self", ".", "_profile_list", "=", "yield", "gen", ".", "maybe_future", "(", "self", "...	41.133333	18.933333
def is_stats_query(query): """ check if the query is a normal search or select query :param query: :return: """ if not query: return False # remove all " enclosed strings nq = re.sub(r'"[^"]*"', '', query) # check if there's \| .... select if re.findall(r'\\|...	[ "def", "is_stats_query", "(", "query", ")", ":", "if", "not", "query", ":", "return", "False", "# remove all \" enclosed strings\r", "nq", "=", "re", ".", "sub", "(", "r'\"[^\"]*\"'", ",", "''", ",", "query", ")", "# check if there's \| .... select\r", "if", "re"...	22.352941	18.117647
def repr_data_size(size_in_bytes, precision=2): # pragma: no cover """Return human readable string represent of a file size. Doesn"t support size greater than 1EB. For example: - 100 bytes => 100 B - 100,000 bytes => 97.66 KB - 100,000,000 bytes => 95.37 MB - 100,000,000,000 bytes => 93.1...	[ "def", "repr_data_size", "(", "size_in_bytes", ",", "precision", "=", "2", ")", ":", "# pragma: no cover", "if", "size_in_bytes", "<", "1024", ":", "return", "\"%s B\"", "%", "size_in_bytes", "magnitude_of_data", "=", "[", "\"B\"", ",", "\"KB\"", ",", "\"MB\"", ...	30.131579	16.815789
def fetch(self): """ Fetch the recent refs from the remotes. Unless git-up.fetch.all is set to true, all remotes with locally existent branches will be fetched. """ fetch_kwargs = {'multiple': True} fetch_args = [] if self.is_prune(): ...	[ "def", "fetch", "(", "self", ")", ":", "fetch_kwargs", "=", "{", "'multiple'", ":", "True", "}", "fetch_args", "=", "[", "]", "if", "self", ".", "is_prune", "(", ")", ":", "fetch_kwargs", "[", "'prune'", "]", "=", "True", "if", "self", ".", "settings...	29.129032	15.645161
def delete_vlan(self, nexus_host, vlanid): """Delete a VLAN on Nexus Switch given the VLAN ID.""" starttime = time.time() path_snip = snipp.PATH_VLAN % vlanid self.client.rest_delete(path_snip, nexus_host) self.capture_and_print_timeshot( starttime, "del_vlan", ...	[ "def", "delete_vlan", "(", "self", ",", "nexus_host", ",", "vlanid", ")", ":", "starttime", "=", "time", ".", "time", "(", ")", "path_snip", "=", "snipp", ".", "PATH_VLAN", "%", "vlanid", "self", ".", "client", ".", "rest_delete", "(", "path_snip", ",", ...	33.7	12.5
def new_game(self, mode=None): """ new_game() creates a new game. Docs TBC. :return: JSON String containing the game object. """ # Create a placeholder Game object self._g = GameObject() # Validate game mode _mode = mode or "normal" logging.deb...	[ "def", "new_game", "(", "self", ",", "mode", "=", "None", ")", ":", "# Create a placeholder Game object", "self", ".", "_g", "=", "GameObject", "(", ")", "# Validate game mode", "_mode", "=", "mode", "or", "\"normal\"", "logging", ".", "debug", "(", "\"new_gam...	31.658537	21.560976
def write_table(self): """ \|write_table\| with Markdown table format. :raises pytablewriter.EmptyHeaderError: If the \|headers\| is empty. :Example: :ref:`example-markdown-table-writer` .. note:: - \|None\| values are written as an empty string - ...	[ "def", "write_table", "(", "self", ")", ":", "with", "self", ".", "_logger", ":", "self", ".", "_verify_property", "(", ")", "self", ".", "__write_chapter", "(", ")", "self", ".", "_write_table", "(", ")", "if", "self", ".", "is_write_null_line_after_table",...	31.368421	17.578947
def _init(self, run_conf, run_number=None): '''Initialization before a new run. ''' self.stop_run.clear() self.abort_run.clear() self._run_status = run_status.running self._write_run_number(run_number) self._init_run_conf(run_conf)	[ "def", "_init", "(", "self", ",", "run_conf", ",", "run_number", "=", "None", ")", ":", "self", ".", "stop_run", ".", "clear", "(", ")", "self", ".", "abort_run", ".", "clear", "(", ")", "self", ".", "_run_status", "=", "run_status", ".", "running", ...	35	8.25
def auth_optional(validator): """Decorate a RequestHandler or method to accept optional authentication token If decorating a coroutine make sure coroutine decorator is first. eg.:: class Handler(tornado.web.RequestHandler): @auth_required(validator) @coroutine ...	[ "def", "auth_optional", "(", "validator", ")", ":", "def", "_auth_optional_decorator", "(", "handler", ")", ":", "if", "inspect", ".", "isclass", "(", "handler", ")", ":", "return", "_wrap_class", "(", "handler", ",", "validator", ")", "return", "_auth_optiona...	30.809524	19.52381
def evaluate_rule(self, rule, value, target): """Calculate the value.""" def evaluate(expr): if expr in LOGICAL_OPERATORS.values(): return expr rvalue = self.get_value_for_expr(expr, target) if rvalue is None: return False # ignore thi...	[ "def", "evaluate_rule", "(", "self", ",", "rule", ",", "value", ",", "target", ")", ":", "def", "evaluate", "(", "expr", ")", ":", "if", "expr", "in", "LOGICAL_OPERATORS", ".", "values", "(", ")", ":", "return", "expr", "rvalue", "=", "self", ".", "g...	38.1875	15.5625
def _start_element (self, tag, attrs, end): """ Print HTML element with end string. @param tag: tag name @type tag: string @param attrs: tag attributes @type attrs: dict @param end: either > or /> @type end: string @return: None """ ...	[ "def", "_start_element", "(", "self", ",", "tag", ",", "attrs", ",", "end", ")", ":", "tag", "=", "tag", ".", "encode", "(", "self", ".", "encoding", ",", "\"ignore\"", ")", "self", ".", "fd", ".", "write", "(", "\"<%s\"", "%", "tag", ".", "replace...	33.227273	12.045455
def transfer(self, from_acct: Account, b58_to_address: str, value: int, payer_acct: Account, gas_limit: int, gas_price: int) -> str: """ This interface is used to call the Transfer method in ope4 that transfer an amount of tokens from one account to another account. :pa...	[ "def", "transfer", "(", "self", ",", "from_acct", ":", "Account", ",", "b58_to_address", ":", "str", ",", "value", ":", "int", ",", "payer_acct", ":", "Account", ",", "gas_limit", ":", "int", ",", "gas_price", ":", "int", ")", "->", "str", ":", "func",...	62.857143	30.571429
def _discover(kwargs): """Yields info about station servers announcing themselves via multicast.""" query = station_server.MULTICAST_QUERY for host, response in multicast.send(query, kwargs): try: result = json.loads(response) except ValueError: _LOG.warn('Received bad JSON over multicast ...	[ "def", "_discover", "(", "", "", "kwargs", ")", ":", "query", "=", "station_server", ".", "MULTICAST_QUERY", "for", "host", ",", "response", "in", "multicast", ".", "send", "(", "query", ",", "", "", "kwargs", ")", ":", "try", ":", "result", "=", ...	44.555556	19.333333
def stop(name=None): ''' Kills syslog-ng. This function is intended to be used from the state module. Users shouldn't use this function, if the service module is available on their system. If :mod:`syslog_ng.set_config_file <salt.modules.syslog_ng.set_binary_path>` is called before, this function ...	[ "def", "stop", "(", "name", "=", "None", ")", ":", "pids", "=", "__salt__", "[", "'ps.pgrep'", "]", "(", "pattern", "=", "'syslog-ng'", ")", "if", "not", "pids", ":", "return", "_format_state_result", "(", "name", ",", "result", "=", "False", ",", "com...	31.571429	24.942857
def _append_path(new_path): # type: (str) -> None """ Given a path string, append it to sys.path """ for path in sys.path: path = os.path.abspath(path) if new_path == path: return sys.path.append(new_path)	[ "def", "_append_path", "(", "new_path", ")", ":", "# type: (str) -> None", "for", "path", "in", "sys", ".", "path", ":", "path", "=", "os", ".", "path", ".", "abspath", "(", "path", ")", "if", "new_path", "==", "path", ":", "return", "sys", ".", "path"...	34.285714	10.571429
def _attempt_connect(host, port, timeout, verify, kwargs): """ Internal function to attempt :param host: <str> "localhost" or IPAddress :param port: <int> :param timeout: <int> :param verify: <bool> :param kwargs: <dict> rethinkdb keyword args :return: <connection> or <NoneType> ...	[ "def", "_attempt_connect", "(", "host", ",", "port", ",", "timeout", ",", "verify", ",", "", "", "kwargs", ")", ":", "try", ":", "connection", "=", "rethinkdb", ".", "connect", "(", "host", ",", "port", ",", "timeout", "=", "timeout", ",", "", ""...	33.227273	11.045455
def convert_ensembl_to_entrez(self, ensembl): """Convert Ensembl Id to Entrez Gene Id""" if 'ENST' in ensembl: pass else: raise (IndexError) # Submit resquest to NCBI eutils/Gene database server = "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?...	[ "def", "convert_ensembl_to_entrez", "(", "self", ",", "ensembl", ")", ":", "if", "'ENST'", "in", "ensembl", ":", "pass", "else", ":", "raise", "(", "IndexError", ")", "# Submit resquest to NCBI eutils/Gene database", "server", "=", "\"http://eutils.ncbi.nlm.nih.gov/entr...	36.095238	18.571429
def load(self, config): """Load the password from the configuration file.""" password_dict = {} if config is None: logger.warning("No configuration file available. Cannot load password list.") elif not config.has_section(self._section): logger.warning("No [%s] se...	[ "def", "load", "(", "self", ",", "config", ")", ":", "password_dict", "=", "{", "}", "if", "config", "is", "None", ":", "logger", ".", "warning", "(", "\"No configuration file available. Cannot load password list.\"", ")", "elif", "not", "config", ".", "has_sect...	43.833333	30.5
def parse_changes(): """ grab version from CHANGES and validate entry """ with open('CHANGES') as changes: for match in re.finditer(RE_CHANGES, changes.read(1024), re.M): if len(match.group(1)) != len(match.group(3)): error('incorrect underline in CHANGES') date...	[ "def", "parse_changes", "(", ")", ":", "with", "open", "(", "'CHANGES'", ")", "as", "changes", ":", "for", "match", "in", "re", ".", "finditer", "(", "RE_CHANGES", ",", "changes", ".", "read", "(", "1024", ")", ",", "re", ".", "M", ")", ":", "if", ...	34.941176	21.176471
def create_connection_model(service): """ Create an SQL Alchemy table that connects the provides services """ # the services connected services = service._services # the mixins / base for the model bases = (BaseModel,) # the fields of the derived attributes = {model_service_name(service): f...	[ "def", "create_connection_model", "(", "service", ")", ":", "# the services connected", "services", "=", "service", ".", "_services", "# the mixins / base for the model", "bases", "=", "(", "BaseModel", ",", ")", "# the fields of the derived", "attributes", "=", "{", "m...	41.416667	20.333333
def metamodel_from_str(lang_desc, metamodel=None, **kwargs): """ Creates a new metamodel from the textX description given as a string. Args: lang_desc(str): A textX language description. metamodel(TextXMetaModel): A metamodel that should be used. other params: See TextXMetaModel. ...	[ "def", "metamodel_from_str", "(", "lang_desc", ",", "metamodel", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "not", "metamodel", ":", "metamodel", "=", "TextXMetaModel", "(", "", "", "kwargs", ")", "language_from_str", "(", "lang_desc", ",", "m...	26.176471	21.823529
def get_paths(scheme=_get_default_scheme(), vars=None, expand=True): """Return a mapping containing an install scheme. ``scheme`` is the install scheme name. If not provided, it will return the default scheme for the current platform. """ _ensure_cfg_read() if expand: return _expand_var...	[ "def", "get_paths", "(", "scheme", "=", "_get_default_scheme", "(", ")", ",", "vars", "=", "None", ",", "expand", "=", "True", ")", ":", "_ensure_cfg_read", "(", ")", "if", "expand", ":", "return", "_expand_vars", "(", "scheme", ",", "vars", ")", "else",...	34.454545	17.181818
def plotly( data: typing.Union[dict, list] = None, layout: dict = None, scale: float = 0.5, figure: dict = None, static: bool = False ): """ Creates a Plotly plot in the display with the specified data and layout. :param data: The Plotly trace data to be ...	[ "def", "plotly", "(", "data", ":", "typing", ".", "Union", "[", "dict", ",", "list", "]", "=", "None", ",", "layout", ":", "dict", "=", "None", ",", "scale", ":", "float", "=", "0.5", ",", "figure", ":", "dict", "=", "None", ",", "static", ":", ...	32.659091	21.25
def recv(self, socket, mode=zmq.NOBLOCK, content=True, copy=True): """Receive and unpack a message. Parameters ---------- socket : ZMQStream or Socket The socket or stream to use in receiving. Returns ------- [idents], msg [idents] is a l...	[ "def", "recv", "(", "self", ",", "socket", ",", "mode", "=", "zmq", ".", "NOBLOCK", ",", "content", "=", "True", ",", "copy", "=", "True", ")", ":", "if", "isinstance", "(", "socket", ",", "ZMQStream", ")", ":", "socket", "=", "socket", ".", "socke...	36.424242	19.181818
def process_item(self, item, spider): """ Store item data in DB. First determine if a version of the article already exists, if so then 'migrate' the older version to the archive table. Second store the new article in the current version table """ # Set default...	[ "def", "process_item", "(", "self", ",", "item", ",", "spider", ")", ":", "# Set defaults", "version", "=", "1", "ancestor", "=", "0", "# Search the CurrentVersion table for an old version of the article", "try", ":", "self", ".", "cursor", ".", "execute", "(", "s...	45.11236	22.685393
def sign(self, url, endpoint, endpoint_path, method_verb, args, *kwargs): """ Dummy Signature creation method. Override this in child. URL is required to be returned, as some Signatures use the url for sig generation, and api calls made must match the address exactly. param url...	[ "def", "sign", "(", "self", ",", "url", ",", "endpoint", ",", "endpoint_path", ",", "method_verb", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "url", "=", "self", ".", "uri", "return", "url", ",", "{", "'params'", ":", "{", "'test_param'", ...	50.5	25.642857
def _exclude_ss_bonded_cysteines(self): """ Pre-compute ss bonds to discard cystines for H-adding. """ ss_bonds = self.nh_structure.search_ss_bonds() for cys_pair in ss_bonds: cys1, cys2 = cys_pair cys1.resname = 'CYX' c...	[ "def", "_exclude_ss_bonded_cysteines", "(", "self", ")", ":", "ss_bonds", "=", "self", ".", "nh_structure", ".", "search_ss_bonds", "(", ")", "for", "cys_pair", "in", "ss_bonds", ":", "cys1", ",", "cys2", "=", "cys_pair", "cys1", ".", "resname", "=", "'CYX'"...	29.909091	11.545455
def max_variance_genes(data, nbins=5, frac=0.2): """ This function identifies the genes that have the max variance across a number of bins sorted by mean. Args: data (array): genes x cells nbins (int): number of bins to sort genes by mean expression level. Default: 10. frac (flo...	[ "def", "max_variance_genes", "(", "data", ",", "nbins", "=", "5", ",", "frac", "=", "0.2", ")", ":", "# TODO: profile, make more efficient for large matrices", "# 8000 cells: 0.325 seconds", "# top time: sparse.csc_tocsr, csc_matvec, astype, copy, mul_scalar", "# 73233 cells: 5.347...	35.930233	16.674419
def get_ttf(self): """ Given a search path, find file with requested extension """ font_dict = {} families = [] rootdirlist = string.split(self.search_path, os.pathsep) #for rootdir in rootdirlist: # rootdir = os.path.expanduser(rootdir) for dirName, subdirLis...	[ "def", "get_ttf", "(", "self", ")", ":", "font_dict", "=", "{", "}", "families", "=", "[", "]", "rootdirlist", "=", "string", ".", "split", "(", "self", ".", "search_path", ",", "os", ".", "pathsep", ")", "#for rootdir in rootdirlist:", "# rootdir = os.pa...	49.179487	16.435897
def lev(self): """Pressure levels at grid centers (hPa or mb) :getter: Returns the points of axis ``'lev'`` if availible in the process's domains. :type: array :raises: :exc:`ValueError` if no ``'lev'`` axis can be found. """ ...	[ "def", "lev", "(", "self", ")", ":", "try", ":", "for", "domname", ",", "dom", "in", "self", ".", "domains", ".", "items", "(", ")", ":", "try", ":", "thislev", "=", "dom", ".", "axes", "[", "'lev'", "]", ".", "points", "except", ":", "pass", "...	31	18
def write(self, outname, dtype='default', format='ENVI', nodata='default', compress_tif=False, overwrite=False): """ write the raster object to a file. Parameters ---------- outname: str the file to be written dtype: str the data type of the writt...	[ "def", "write", "(", "self", ",", "outname", ",", "dtype", "=", "'default'", ",", "format", "=", "'ENVI'", ",", "nodata", "=", "'default'", ",", "compress_tif", "=", "False", ",", "overwrite", "=", "False", ")", ":", "if", "os", ".", "path", ".", "is...	39.712121	20.19697
def _writeCloseFrame(self, reason=DISCONNECT.GO_AWAY): '''Write a close frame with the given reason and schedule this connection close. ''' self.transport.writeClose(reason) self.transport.loseConnection() self.transport = None	[ "def", "_writeCloseFrame", "(", "self", ",", "reason", "=", "DISCONNECT", ".", "GO_AWAY", ")", ":", "self", ".", "transport", ".", "writeClose", "(", "reason", ")", "self", ".", "transport", ".", "loseConnection", "(", ")", "self", ".", "transport", "=", ...	33.625	17.625
def urlAt(self, index): """ Returns the url at the inputed index wihtin the stack. If the index \ is invalid, then a blank string is returned. :return <str> """ if 0 <= index and index < len(self._stack): return self._stack[index][0] retu...	[ "def", "urlAt", "(", "self", ",", "index", ")", ":", "if", "0", "<=", "index", "and", "index", "<", "len", "(", "self", ".", "_stack", ")", ":", "return", "self", ".", "_stack", "[", "index", "]", "[", "0", "]", "return", "''" ]	31.6	14.8
def _check_equal_shape(name, static_shape, dynamic_shape, static_target_shape, dynamic_target_shape=None): """Check that source and target shape match, statically if possible.""" static_target_shape = tf.TensorShape(static_...	[ "def", "_check_equal_shape", "(", "name", ",", "static_shape", ",", "dynamic_shape", ",", "static_target_shape", ",", "dynamic_target_shape", "=", "None", ")", ":", "static_target_shape", "=", "tf", ".", "TensorShape", "(", "static_target_shape", ")", "if", "tensors...	46.230769	19.115385
def query_download_tasks(self, task_ids, operate_type=1, *kwargs): """根据任务ID号，查询离线下载任务信息及进度信息。 :param task_ids: 要查询的任务 ID字符串列表 :type task_ids: list or tuple :param operate_type: 0：查任务信息 * 1：查进度信息，默认为1 :return: requests...	[ "def", "query_download_tasks", "(", "self", ",", "task_ids", ",", "operate_type", "=", "1", ",", "", "", "kwargs", ")", ":", "params", "=", "{", "'task_ids'", ":", "','", ".", "join", "(", "map", "(", "str", ",", "task_ids", ")", ")", ",", "'op_typ...	28.833333	23.530303
def get_next_step(self): """Find the proper step when user clicks the Next button. :returns: The step to be switched to. :rtype: WizardStep instance or None """ if self.validate_extent(): new_step = self.parent.step_fc_summary else: new_step = sel...	[ "def", "get_next_step", "(", "self", ")", ":", "if", "self", ".", "validate_extent", "(", ")", ":", "new_step", "=", "self", ".", "parent", ".", "step_fc_summary", "else", ":", "new_step", "=", "self", ".", "parent", ".", "step_fc_extent_disjoint", "return",...	33.272727	12.909091
def check_sp_certs(self): """ Checks if the x509 certs of the SP exists and are valid. :returns: If the x509 certs of the SP exists and are valid :rtype: boolean """ key = self.get_sp_key() cert = self.get_sp_cert() return key is not None and cert is not N...	[ "def", "check_sp_certs", "(", "self", ")", ":", "key", "=", "self", ".", "get_sp_key", "(", ")", "cert", "=", "self", ".", "get_sp_cert", "(", ")", "return", "key", "is", "not", "None", "and", "cert", "is", "not", "None" ]	35	12.111111
def header(self): ''' :class:`HeaderDict` filled with request headers. HeaderDict keys are case insensitive str.title()d ''' if self._header is None: self._header = HeaderDict() for key, value in self.environ.iteritems(): if key.startswith('HT...	[ "def", "header", "(", "self", ")", ":", "if", "self", ".", "_header", "is", "None", ":", "self", ".", "_header", "=", "HeaderDict", "(", ")", "for", "key", ",", "value", "in", "self", ".", "environ", ".", "iteritems", "(", ")", ":", "if", "key", ...	37.333333	16.333333
def standalone_from_launchable(cls, launch): """ Given a launchable resource, create a definition of a standalone instance, which doesn't depend on or contain references to other elements. """ attrs = copy.copy(launch.el_attrs) # Remove attributes we overwrite / d...	[ "def", "standalone_from_launchable", "(", "cls", ",", "launch", ")", ":", "attrs", "=", "copy", ".", "copy", "(", "launch", ".", "el_attrs", ")", "# Remove attributes we overwrite / don't need", "del", "attrs", "[", "\"Type\"", "]", "if", "attrs", ".", "has_key"...	44.086957	14.608696
def redirect(pattern, to, permanent=True, locale_prefix=True, anchor=None, name=None, query=None, vary=None, cache_timeout=12, decorators=None, re_flags=None, to_args=None, to_kwargs=None, prepend_locale=True, merge_query=False): """ Return a url matcher suited for urlpatterns. pa...	[ "def", "redirect", "(", "pattern", ",", "to", ",", "permanent", "=", "True", ",", "locale_prefix", "=", "True", ",", "anchor", "=", "None", ",", "name", "=", "None", ",", "query", "=", "None", ",", "vary", "=", "None", ",", "cache_timeout", "=", "12"...	40.923077	24.569231
def add_text_memo(self, memo_text): """Set the memo for the transaction to a new :class:`TextMemo <stellar_base.memo.TextMemo>`. :param memo_text: The text for the memo to add. :type memo_text: str, bytes :return: This builder instance. """ memo_text = memo.Text...	[ "def", "add_text_memo", "(", "self", ",", "memo_text", ")", ":", "memo_text", "=", "memo", ".", "TextMemo", "(", "memo_text", ")", "return", "self", ".", "add_memo", "(", "memo_text", ")" ]	33.181818	10.272727
def save(self, saveLocation, outName): """ Saves a featureset object to a feature class Input: saveLocation - output location of the data outName - name of the table the data will be saved to Types: *.csv - CSV file returned ...	[ "def", "save", "(", "self", ",", "saveLocation", ",", "outName", ")", ":", "filename", ",", "file_extension", "=", "os", ".", "path", ".", "splitext", "(", "outName", ")", "if", "(", "file_extension", "==", "\".csv\"", ")", ":", "res", "=", "os", ".", ...	37.629032	14.854839
def _generate_ascii(self, matrix, foreground, background): """ Generates an identicon "image" in the ASCII format. The image will just output the matrix used to generate the identicon. Arguments: matrix - Matrix describing which blocks in the identicon should be pai...	[ "def", "_generate_ascii", "(", "self", ",", "matrix", ",", "foreground", ",", "background", ")", ":", "return", "\"\\n\"", ".", "join", "(", "[", "\"\"", ".", "join", "(", "[", "foreground", "if", "cell", "else", "background", "for", "cell", "in", "row",...	33.782609	29.695652
def findFile(self, fname, numtype): """ Function that finds the associated file for fname when Fname is time or NDump. Parameters ---------- fname : string The name of the file we are looking for. numType : string Designates how this funct...	[ "def", "findFile", "(", "self", ",", "fname", ",", "numtype", ")", ":", "numType", "=", "numtype", ".", "upper", "(", ")", "if", "numType", "==", "'FILE'", ":", "#do nothing", "return", "fname", "elif", "numType", "==", "'CYCNUM'", ":", "try", ":", "fn...	39.275	18.275
def _load_config(self): """ Loads the configuration from YAML, if no override config was passed in initially. """ if ( self.config ): # any config being pre-set at init will short circuit out, but not a plain {} return # Verify that we're in a project r...	[ "def", "_load_config", "(", "self", ")", ":", "if", "(", "self", ".", "config", ")", ":", "# any config being pre-set at init will short circuit out, but not a plain {}", "return", "# Verify that we're in a project", "repo_root", "=", "self", ".", "repo_root", "if", "not"...	40.148148	23.981481
def database_names(self, session=None): """DEPRECATED: Get a list of the names of all databases on the connected server. :Parameters: - `session` (optional): a :class:`~pymongo.client_session.ClientSession`. .. versionchanged:: 3.7 Deprecated. Use :...	[ "def", "database_names", "(", "self", ",", "session", "=", "None", ")", ":", "warnings", ".", "warn", "(", "\"database_names is deprecated. Use list_database_names \"", "\"instead.\"", ",", "DeprecationWarning", ",", "stacklevel", "=", "2", ")", "return", "self", "....	36.470588	17.352941
def make_stream( name, # type: Text bin_file, # type: RawIOBase mode="r", # type: Text buffering=-1, # type: int encoding=None, # type: Optional[Text] errors=None, # type: Optional[Text] newline="", # type: Optional[Text] line_buffering=False, # type: bool **kwargs # type: A...	[ "def", "make_stream", "(", "name", ",", "# type: Text", "bin_file", ",", "# type: RawIOBase", "mode", "=", "\"r\"", ",", "# type: Text", "buffering", "=", "-", "1", ",", "# type: int", "encoding", "=", "None", ",", "# type: Optional[Text]", "errors", "=", "None"...	29.288462	15.788462
def get_note(self, note_id): """ Get a loan note that you've invested in by ID Parameters ---------- note_id : int The note ID Returns ------- dict A dictionary representing the matching note or False Examples ---...	[ "def", "get_note", "(", "self", ",", "note_id", ")", ":", "index", "=", "0", "while", "True", ":", "notes", "=", "self", ".", "my_notes", "(", "start_index", "=", "index", ",", "sort_by", "=", "'noteId'", ")", "if", "notes", "[", "'result'", "]", "!=...	31.056604	24.113208
def effective_rules(self, context=None): """ Get effective rules for this rebulk object and its children. :param context: :type context: :return: :rtype: """ rules = Rules() rules.extend(self._rules) for rebulk in self._rebulks: ...	[ "def", "effective_rules", "(", "self", ",", "context", "=", "None", ")", ":", "rules", "=", "Rules", "(", ")", "rules", ".", "extend", "(", "self", ".", "_rules", ")", "for", "rebulk", "in", "self", ".", "_rebulks", ":", "if", "not", "rebulk", ".", ...	29.357143	12.357143
def verify(self, data, signature): """Verify the signature of a sequence of bytes. Verify the signature of a sequence of bytes using the verifying (public) key and the data that was originally signed, otherwise throws an exception. :param bytes data: A sequence of bytes that we...	[ "def", "verify", "(", "self", ",", "data", ",", "signature", ")", ":", "try", ":", "return", "self", ".", "verifying_key", ".", "verify", "(", "signature", ",", "data", ")", "except", "ed25519", ".", "BadSignatureError", ":", "raise", "BadSignatureError", ...	44.5	22
def order_error(subtag, got, expected): """ Output an error indicating that tags were out of order. """ options = SUBTAG_TYPES[expected:] if len(options) == 1: expect_str = options[0] elif len(options) == 2: expect_str = '%s or %s' % (options[0], options[1]) else: exp...	[ "def", "order_error", "(", "subtag", ",", "got", ",", "expected", ")", ":", "options", "=", "SUBTAG_TYPES", "[", "expected", ":", "]", "if", "len", "(", "options", ")", "==", "1", ":", "expect_str", "=", "options", "[", "0", "]", "elif", "len", "(", ...	38.785714	15.071429
def _get_list_key(self, obj, key, vc, obj_nex_id=None): """Either: * Returns a list, or * Generates a MissingExpectedListWarning and returns None (if the value is not a dict or list) """ k = obj.get(key) if k is None: return None ...	[ "def", "_get_list_key", "(", "self", ",", "obj", ",", "key", ",", "vc", ",", "obj_nex_id", "=", "None", ")", ":", "k", "=", "obj", ".", "get", "(", "key", ")", "if", "k", "is", "None", ":", "return", "None", "if", "isinstance", "(", "k", ",", "...	36.7	13.05
def check_infile(filename): """Check text file exisitense. Argument: filename: text file of bulk updating """ if os.path.isfile(filename): domain = os.path.basename(filename).split('.txt')[0] return domain else: sys.stderr.write("ERROR: %s : No such file\n" % filena...	[ "def", "check_infile", "(", "filename", ")", ":", "if", "os", ".", "path", ".", "isfile", "(", "filename", ")", ":", "domain", "=", "os", ".", "path", ".", "basename", "(", "filename", ")", ".", "split", "(", "'.txt'", ")", "[", "0", "]", "return",...	25.461538	19.076923
def set_properties(obj, values): """ Sets values of some (all) object properties. If some properties do not exist or introspection fails they are just silently skipped and no errors thrown. :param obj: an object to write properties to. :param values: a map, containing ...	[ "def", "set_properties", "(", "obj", ",", "values", ")", ":", "if", "values", "==", "None", "or", "len", "(", "values", ")", "==", "0", ":", "return", "for", "(", "name", ",", "value", ")", "in", "values", ":", "PropertyReflector", ".", "set_property",...	32.125	20
def rr_history(self, ips): """Get the domains related to input ips. Args: ips: an enumerable of strings as ips Returns: An enumerable of resource records and features """ api_name = 'opendns-rr_history' fmt_url_path = u'dnsdb/ip/a/{0}.json' ...	[ "def", "rr_history", "(", "self", ",", "ips", ")", ":", "api_name", "=", "'opendns-rr_history'", "fmt_url_path", "=", "u'dnsdb/ip/a/{0}.json'", "return", "self", ".", "_multi_get", "(", "api_name", ",", "fmt_url_path", ",", "ips", ")" ]	33	14.181818
def fql(self, query, args=None, post_args=None): """FQL query. Example query: "SELECT affiliations FROM user WHERE uid = me()" """ args = args or {} if self.access_token: if post_args is not None: post_args["access_token"] = self.access_token ...	[ "def", "fql", "(", "self", ",", "query", ",", "args", "=", "None", ",", "post_args", "=", "None", ")", ":", "args", "=", "args", "or", "{", "}", "if", "self", ".", "access_token", ":", "if", "post_args", "is", "not", "None", ":", "post_args", "[", ...	34.470588	18.509804
def get_customer_group_by_id(cls, customer_group_id, **kwargs): """Find CustomerGroup Return single instance of CustomerGroup by its ID. This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.get_cus...	[ "def", "get_customer_group_by_id", "(", "cls", ",", "customer_group_id", ",", "", "", "kwargs", ")", ":", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async'", ")", ":", "return", "cls", ".", "_get_custome...	44.714286	22.333333
def loop(self): """ Run the demo suite in a loop. """ logging.info("Running %s in loop mode." % self.service_name) res = None while True: try: res = self.run() time.sleep(self.loop_duration) except KeyboardInterrupt...	[ "def", "loop", "(", "self", ")", ":", "logging", ".", "info", "(", "\"Running %s in loop mode.\"", "%", "self", ".", "service_name", ")", "res", "=", "None", "while", "True", ":", "try", ":", "res", "=", "self", ".", "run", "(", ")", "time", ".", "sl...	33.777778	20.333333
def iterSourceCode(paths): """ Iterate over all Python source files in C{paths}. @param paths: A list of paths. Directories will be recursed into and any .py files found will be yielded. Any non-directories will be yielded as-is. """ for path in paths: if os.path.isdir(pat...	[ "def", "iterSourceCode", "(", "paths", ")", ":", "for", "path", "in", "paths", ":", "if", "os", ".", "path", ".", "isdir", "(", "path", ")", ":", "for", "dirpath", ",", "dirnames", ",", "filenames", "in", "os", ".", "walk", "(", "path", ")", ":", ...	35.411765	16.352941
def shortname(inputid): # type: (Text) -> Text """Returns the last segment of the provided fragment or path.""" parsed_id = urllib.parse.urlparse(inputid) if parsed_id.fragment: return parsed_id.fragment.split(u"/")[-1] return parsed_id.path.split(u"/")[-1]	[ "def", "shortname", "(", "inputid", ")", ":", "# type: (Text) -> Text", "parsed_id", "=", "urllib", ".", "parse", ".", "urlparse", "(", "inputid", ")", "if", "parsed_id", ".", "fragment", ":", "return", "parsed_id", ".", "fragment", ".", "split", "(", "u\"/\...	46.166667	6.166667
def dbf_asdict(fn, usecols=None, keystyle='ints'): """Return data from dbf file fn as a dict. fn: str The filename string. usecols: seqence The columns to use, 0-based. keystyle: str 'ints' or 'names' accepted. Should be 'ints' (default) when this function is given to ...	[ "def", "dbf_asdict", "(", "fn", ",", "usecols", "=", "None", ",", "keystyle", "=", "'ints'", ")", ":", "if", "keystyle", "not", "in", "[", "'ints'", ",", "'names'", "]", ":", "raise", "ValueError", "(", "'Unknown keyword: '", "+", "str", "(", "keystyle",...	26.216216	20.783784

def prepare_to_run(self, clock, period_count): """ Prepare the entity for execution. :param clock: The clock containing the execution start time and execution period information. :param period_count: The total amount of periods this activity will be requested to be r...

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32.72

18.8

def concat_multiple_inputs(data, sample): """ If multiple fastq files were appended into the list of fastqs for samples then we merge them here before proceeding. """ ## if more than one tuple in fastq list if len(sample.files.fastqs) > 1: ## create a cat command to append them all (d...

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44.564103

21.769231

def deps(ctx): '''Install or update development dependencies''' header(deps.__doc__) with ctx.cd(ROOT): ctx.run('pip install -r requirements/develop.pip -r requirements/doc.pip', pty=True)

[ "def", "deps", "(", "ctx", ")", ":", "header", "(", "deps", ".", "__doc__", ")", "with", "ctx", ".", "cd", "(", "ROOT", ")", ":", "ctx", ".", "run", "(", "'pip install -r requirements/develop.pip -r requirements/doc.pip'", ",", "pty", "=", "True", ")" ]

40.8

24.8

def check(self): """ Run the setting checker against the setting raw value. Raises: AttributeError: if the setting is missing and required. ValueError: (or other Exception) if the raw value is invalid. """ super(NestedSetting, self).check() errors...

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33.117647

15.588235

def quit(self): '''Quit fetcher''' self._running = False self._quit = True self.ioloop.add_callback(self.ioloop.stop) if hasattr(self, 'xmlrpc_server'): self.xmlrpc_ioloop.add_callback(self.xmlrpc_server.stop) self.xmlrpc_ioloop.add_callback(self.xmlrpc_io...

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40.375

16.625

def insert(self, rectangle): """ Insert a rectangle into the bin. Parameters ------------- rectangle: (2,) float, size of rectangle to insert """ rectangle = np.asanyarray(rectangle, dtype=np.float64) for child in self.child: if child is not ...

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34.659574

18.914894

def add_result(self, job): """Adds a job run result to the history table. :param dict job: The job dictionary :returns: True """ self.cur.execute( "INSERT INTO history VALUES(?,?,?,?)", (job["id"], job["description"], job["last-run"], job["last-run-result"...

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33.5

16.6

def use_args( self, argmap, req=None, locations=None, as_kwargs=False, validate=None, error_status_code=None, error_headers=None, ): """Decorator that injects parsed arguments into a view function or method. Example usage with Flask: :...

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38.565217

19.275362

def cleanup(self): """ Release resources used by supporting classes """ try: self.unload_lime() except AttributeError as ex: pass self.tunnel.cleanup() self.shell.cleanup()

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24.3

12.3

def symlink(source, destination): """Create a symbolic link""" log("Symlinking {} as {}".format(source, destination)) cmd = [ 'ln', '-sf', source, destination, ] subprocess.check_call(cmd)

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23.1

19.7

def rldecode(data): """ RunLength decoder (Adobe version) implementation based on PDF Reference version 1.4 section 3.3.4: The RunLengthDecode filter decodes data that has been encoded in a simple byte-oriented format based on run length. The encoded data is a sequence of runs, where...

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39.971429

17.571429

def set_level(self, level=1): """Set the logging level Parameters ---------- level : `int` or `bool` (optional, default: 1) If False or 0, prints WARNING and higher messages. If True or 1, prints INFO and higher messages. If 2 or higher, prints all me...

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35.393939

11.848485

def get_all_files(root, followlinks=False): """ Get all files within the given root directory. Note that this list is not ordered. Parameters ---------- root : str Path to a directory followlinks : bool, optional (default: False) Returns ------- filepaths : list ...

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24.772727

19.318182

def delete(self): ''' Deletes link from vault and removes database information ''' if not self._id: verbose('This target does not have an id') return False # Removes link from vault directory verbose('Removing link from vault directory') ...

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28.611111

19.722222

def path(self, var, default=NOTSET, **kwargs): """ :rtype: Path """ return Path(self.get_value(var, default=default), **kwargs)

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31

10.6

def zoom_out(self): """Zoom the view out one zoom step. """ viewer = self.getfocus_viewer() if hasattr(viewer, 'zoom_out'): viewer.zoom_out() return True

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28.428571

7.857143

def training_job_summaries(self, force_refresh=False): """A (paginated) list of everything from ``ListTrainingJobsForTuningJob``. Args: force_refresh (bool): Set to True to fetch the latest data from SageMaker API. Returns: dict: The Amazon SageMaker response for ``List...

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44.827586

24.655172

def combine_counts( fns, define_sample_name=None, ): """ Combine featureCounts output files for multiple samples. Parameters ---------- fns : list of strings Filenames of featureCounts output files to combine. define_sample_name : function A function mapping the featur...

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28.424242

19.212121

def create_header(self, service_id, version_number, name, destination, source, _type=FastlyHeaderType.RESPONSE, action=FastlyHeaderAction.SET, regex=None, substitution=None, ignore_if_set=None, priority=10, response_condition=None, cache_condition=None, request_condition=None): body = self._formdata({ "name": name...

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46.5

28.5

async def arun_process(path: Union[Path, str], target: Callable, *, args: Tuple[Any]=(), kwargs: Dict[str, Any]=None, callback: Callable[[Set[Tuple[Change, str]]], Awaitable]=None, watcher_cls: Type[AllWatcher]=PythonWatcher, ...

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47.333333

21.904762

def do_diff(self, params): """ \x1b[1mNAME\x1b[0m diff - Display the differences between two paths \x1b[1mSYNOPSIS\x1b[0m diff <src> <dst> \x1b[1mDESCRIPTION\x1b[0m The output is interpreted as: -- means the znode is missing in /new-configs ++ means the znode is new...

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30.03125

18.53125

def create_from_assocs(self, assocs, **args): """ Creates from a list of association objects """ amap = defaultdict(list) subject_label_map = {} for a in assocs: subj = a['subject'] subj_id = subj['id'] subj_label = subj['label'] ...

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37.125

14.625

def SGg(self): r'''Specific gravity of the gas phase of the chemical, [dimensionless]. The reference condition is air at 15.6 °C (60 °F) and 1 atm (rho=1.223 kg/m^3). The definition for gases uses the compressibility factor of the reference gas and the chemical both at the reference ...

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40.941176

24.235294

def from_sas_token(cls, address, sas_token, eventhub=None, **kwargs): """Create an EventHubClient from an existing auth token or token generator. :param address: The Event Hub address URL :type address: str :param sas_token: A SAS token or function that returns a SAS token. If a functio...

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57.625

27.375

def macros_update_many(self, data, **kwargs): "https://developer.zendesk.com/rest_api/docs/core/macros#update-many-macros" api_path = "/api/v2/macros/update_many.json" return self.call(api_path, method="PUT", data=data, **kwargs)

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62.5

22.5

def create(self, domain_name, friendly_name=values.unset, voice_url=values.unset, voice_method=values.unset, voice_fallback_url=values.unset, voice_fallback_method=values.unset, voice_status_callback_url=values.unset, voice_status_callback_method=values.unset,...

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49.292683

25.634146

def query_trial(request): """Rest API to query the trial info, with the given trial_id. The url pattern should be like this: curl http://<server>:<port>/query_trial?trial_id=<trial_id> The response may be: { "app_url": "None", "trial_status": "TERMINATED", "params": {'a':...

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30.054054

14.324324

def padded_sequence_accuracy(logits, labels): """Percentage of times that predictions matches labels everywhere (non-0).""" with tf.variable_scope("padded_sequence_accuracy", values=[logits, labels]): logits, labels = _pad_tensors_to_same_length(logits, labels) weights = tf.to_float(tf.not_equal(labels, 0))...

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59.454545

16.090909

def make_reply(self): """ Creates a copy of the message, exchanging sender and receiver Returns: spade.message.Message: a new message with exchanged sender and receiver """ return Message( to=str(self.sender), sender=str(self.to), b...

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26.466667

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def p_sens_level(self, p): 'senslist : AT levelsig' p[0] = SensList((p[2],), lineno=p.lineno(1)) p.set_lineno(0, p.lineno(1))

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36.5

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def inverted(self): ''' Return a version of this instance with inputs replaced by outputs and vice versa. ''' return Instance(input=self.output, output=self.input, annotated_input=self.annotated_output, annotated_output=self.annotated_input...

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46.2

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def validateObjectPath(p): """ Ensures that the provided object path conforms to the DBus standard. Throws a L{error.MarshallingError} if non-conformant @type p: C{string} @param p: A DBus object path """ if not p.startswith('/'): raise MarshallingError('Object paths must begin with...

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def __gen_rel_anno_file(self, top_level_layer): """ A rel annotation file contains edge (rel) attributes. It is e.g. used to annotate the type of a dependency relation (subj, obj etc.). See also: __gen_hierarchy_file() """ paula_id = '{0}.{1}.{2}_{3}_rel'.format(...

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46.695652

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def plot_heatmap( self, rank="auto", normalize="auto", top_n="auto", threshold="auto", title=None, xlabel=None, ylabel=None, tooltip=None, return_chart=False, linkage="average", haxis=None, metric="euclidean", ...

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39.130282

24.59507

def clized_default_shorts(p1, p2, first_option='default_value', second_option=5, third_option=[4, 3], last_option=False): """Help docstring """ print('%s %s %s %s %s %s' % (p1, p2, first_option, second_op...

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43.25

11.5

def generate_random(self, bits_len=None): """Generates a random value. :param int bits_len: :rtype: int """ bits_len = bits_len or self._bits_random return random().getrandbits(bits_len)

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28.5

10.875

def print_big_dir_and_big_file(self, top_n=5): """Print ``top_n`` big dir and ``top_n`` big file in each dir. """ self.assert_is_dir_and_exists() size_table1 = sorted( [(p, p.dirsize) for p in self.select_dir(recursive=False)], key=lambda x: x[1], rev...

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39.35

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def _get_all_resourcescenarios(network_id, user_id): """ Get all the resource scenarios in a network, across all scenarios returns a dictionary of dict objects, keyed on scenario_id """ rs_qry = db.DBSession.query( Dataset.type, Dataset.unit_id, ...

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34.892308

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def _cellMask(self, index): """ Returns the data mask of the cell at the index (without any string conversion) """ row = index.row() col = index.column() if (row < 0 or row >= self.rowCount() or col < 0 or col >= self.columnCount()): return None # The check a...

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40.088235

21.352941

def load_user_options(self): """Load user options from self.user_options dict This can be set via POST to the API or via options_from_form Only supported argument by default is 'profile'. Override in subclasses to support other options. """ if self._profile_list is None...

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41.133333

18.933333

def is_stats_query(query): """ check if the query is a normal search or select query :param query: :return: """ if not query: return False # remove all " enclosed strings nq = re.sub(r'"[^"]*"', '', query) # check if there's | .... select if re.findall(r'\|...

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22.352941

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def repr_data_size(size_in_bytes, precision=2): # pragma: no cover """Return human readable string represent of a file size. Doesn"t support size greater than 1EB. For example: - 100 bytes => 100 B - 100,000 bytes => 97.66 KB - 100,000,000 bytes => 95.37 MB - 100,000,000,000 bytes => 93.1...

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30.131579

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def fetch(self): """ Fetch the recent refs from the remotes. Unless git-up.fetch.all is set to true, all remotes with locally existent branches will be fetched. """ fetch_kwargs = {'multiple': True} fetch_args = [] if self.is_prune(): ...

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29.129032

15.645161

def delete_vlan(self, nexus_host, vlanid): """Delete a VLAN on Nexus Switch given the VLAN ID.""" starttime = time.time() path_snip = snipp.PATH_VLAN % vlanid self.client.rest_delete(path_snip, nexus_host) self.capture_and_print_timeshot( starttime, "del_vlan", ...

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33.7

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def new_game(self, mode=None): """ new_game() creates a new game. Docs TBC. :return: JSON String containing the game object. """ # Create a placeholder Game object self._g = GameObject() # Validate game mode _mode = mode or "normal" logging.deb...

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31.658537

21.560976

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31.368421

17.578947

def _init(self, run_conf, run_number=None): '''Initialization before a new run. ''' self.stop_run.clear() self.abort_run.clear() self._run_status = run_status.running self._write_run_number(run_number) self._init_run_conf(run_conf)

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35

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def auth_optional(validator): """Decorate a RequestHandler or method to accept optional authentication token If decorating a coroutine make sure coroutine decorator is first. eg.:: class Handler(tornado.web.RequestHandler): @auth_required(validator) @coroutine ...

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30.809524

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def evaluate_rule(self, rule, value, target): """Calculate the value.""" def evaluate(expr): if expr in LOGICAL_OPERATORS.values(): return expr rvalue = self.get_value_for_expr(expr, target) if rvalue is None: return False # ignore thi...

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38.1875

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def _start_element (self, tag, attrs, end): """ Print HTML element with end string. @param tag: tag name @type tag: string @param attrs: tag attributes @type attrs: dict @param end: either > or /> @type end: string @return: None """ ...

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33.227273

12.045455

def transfer(self, from_acct: Account, b58_to_address: str, value: int, payer_acct: Account, gas_limit: int, gas_price: int) -> str: """ This interface is used to call the Transfer method in ope4 that transfer an amount of tokens from one account to another account. :pa...

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62.857143

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def _discover(**kwargs): """Yields info about station servers announcing themselves via multicast.""" query = station_server.MULTICAST_QUERY for host, response in multicast.send(query, **kwargs): try: result = json.loads(response) except ValueError: _LOG.warn('Received bad JSON over multicast ...

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44.555556

19.333333

def stop(name=None): ''' Kills syslog-ng. This function is intended to be used from the state module. Users shouldn't use this function, if the service module is available on their system. If :mod:`syslog_ng.set_config_file <salt.modules.syslog_ng.set_binary_path>` is called before, this function ...

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31.571429

24.942857

def _append_path(new_path): # type: (str) -> None """ Given a path string, append it to sys.path """ for path in sys.path: path = os.path.abspath(path) if new_path == path: return sys.path.append(new_path)

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34.285714

10.571429

def _attempt_connect(host, port, timeout, verify, **kwargs): """ Internal function to attempt :param host: <str> "localhost" or IPAddress :param port: <int> :param timeout: <int> :param verify: <bool> :param kwargs: <**dict> rethinkdb keyword args :return: <connection> or <NoneType> ...

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33.227273

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def convert_ensembl_to_entrez(self, ensembl): """Convert Ensembl Id to Entrez Gene Id""" if 'ENST' in ensembl: pass else: raise (IndexError) # Submit resquest to NCBI eutils/Gene database server = "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?...

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36.095238

18.571429

def load(self, config): """Load the password from the configuration file.""" password_dict = {} if config is None: logger.warning("No configuration file available. Cannot load password list.") elif not config.has_section(self._section): logger.warning("No [%s] se...

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43.833333

30.5

def parse_changes(): """ grab version from CHANGES and validate entry """ with open('CHANGES') as changes: for match in re.finditer(RE_CHANGES, changes.read(1024), re.M): if len(match.group(1)) != len(match.group(3)): error('incorrect underline in CHANGES') date...

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34.941176

21.176471

def create_connection_model(service): """ Create an SQL Alchemy table that connects the provides services """ # the services connected services = service._services # the mixins / base for the model bases = (BaseModel,) # the fields of the derived attributes = {model_service_name(service): f...

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41.416667

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def metamodel_from_str(lang_desc, metamodel=None, **kwargs): """ Creates a new metamodel from the textX description given as a string. Args: lang_desc(str): A textX language description. metamodel(TextXMetaModel): A metamodel that should be used. other params: See TextXMetaModel. ...

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26.176471

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def get_paths(scheme=_get_default_scheme(), vars=None, expand=True): """Return a mapping containing an install scheme. ``scheme`` is the install scheme name. If not provided, it will return the default scheme for the current platform. """ _ensure_cfg_read() if expand: return _expand_var...

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34.454545

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def plotly( data: typing.Union[dict, list] = None, layout: dict = None, scale: float = 0.5, figure: dict = None, static: bool = False ): """ Creates a Plotly plot in the display with the specified data and layout. :param data: The Plotly trace data to be ...

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32.659091

21.25

def recv(self, socket, mode=zmq.NOBLOCK, content=True, copy=True): """Receive and unpack a message. Parameters ---------- socket : ZMQStream or Socket The socket or stream to use in receiving. Returns ------- [idents], msg [idents] is a l...

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36.424242

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def process_item(self, item, spider): """ Store item data in DB. First determine if a version of the article already exists, if so then 'migrate' the older version to the archive table. Second store the new article in the current version table """ # Set default...

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45.11236

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def sign(self, url, endpoint, endpoint_path, method_verb, *args, **kwargs): """ Dummy Signature creation method. Override this in child. URL is required to be returned, as some Signatures use the url for sig generation, and api calls made must match the address exactly. param url...

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50.5

25.642857

def _exclude_ss_bonded_cysteines(self): """ Pre-compute ss bonds to discard cystines for H-adding. """ ss_bonds = self.nh_structure.search_ss_bonds() for cys_pair in ss_bonds: cys1, cys2 = cys_pair cys1.resname = 'CYX' c...

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29.909091

11.545455

def max_variance_genes(data, nbins=5, frac=0.2): """ This function identifies the genes that have the max variance across a number of bins sorted by mean. Args: data (array): genes x cells nbins (int): number of bins to sort genes by mean expression level. Default: 10. frac (flo...

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35.930233

16.674419

def get_ttf(self): """ Given a search path, find file with requested extension """ font_dict = {} families = [] rootdirlist = string.split(self.search_path, os.pathsep) #for rootdir in rootdirlist: # rootdir = os.path.expanduser(rootdir) for dirName, subdirLis...

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49.179487

16.435897

def lev(self): """Pressure levels at grid centers (hPa or mb) :getter: Returns the points of axis ``'lev'`` if availible in the process's domains. :type: array :raises: :exc:`ValueError` if no ``'lev'`` axis can be found. """ ...

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31

18

def write(self, outname, dtype='default', format='ENVI', nodata='default', compress_tif=False, overwrite=False): """ write the raster object to a file. Parameters ---------- outname: str the file to be written dtype: str the data type of the writt...

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39.712121

20.19697

def _writeCloseFrame(self, reason=DISCONNECT.GO_AWAY): '''Write a close frame with the given reason and schedule this connection close. ''' self.transport.writeClose(reason) self.transport.loseConnection() self.transport = None

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33.625

17.625

def urlAt(self, index): """ Returns the url at the inputed index wihtin the stack. If the index \ is invalid, then a blank string is returned. :return <str> """ if 0 <= index and index < len(self._stack): return self._stack[index][0] retu...

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31.6

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def _check_equal_shape(name, static_shape, dynamic_shape, static_target_shape, dynamic_target_shape=None): """Check that source and target shape match, statically if possible.""" static_target_shape = tf.TensorShape(static_...

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def query_download_tasks(self, task_ids, operate_type=1, **kwargs): """根据任务ID号，查询离线下载任务信息及进度信息。 :param task_ids: 要查询的任务 ID字符串列表 :type task_ids: list or tuple :param operate_type: * 0：查任务信息 * 1：查进度信息，默认为1 :return: requests...

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28.833333

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def get_next_step(self): """Find the proper step when user clicks the Next button. :returns: The step to be switched to. :rtype: WizardStep instance or None """ if self.validate_extent(): new_step = self.parent.step_fc_summary else: new_step = sel...

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33.272727

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def check_sp_certs(self): """ Checks if the x509 certs of the SP exists and are valid. :returns: If the x509 certs of the SP exists and are valid :rtype: boolean """ key = self.get_sp_key() cert = self.get_sp_cert() return key is not None and cert is not N...

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35

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def header(self): ''' :class:`HeaderDict` filled with request headers. HeaderDict keys are case insensitive str.title()d ''' if self._header is None: self._header = HeaderDict() for key, value in self.environ.iteritems(): if key.startswith('HT...

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37.333333

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def standalone_from_launchable(cls, launch): """ Given a launchable resource, create a definition of a standalone instance, which doesn't depend on or contain references to other elements. """ attrs = copy.copy(launch.el_attrs) # Remove attributes we overwrite / d...

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44.086957

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def redirect(pattern, to, permanent=True, locale_prefix=True, anchor=None, name=None, query=None, vary=None, cache_timeout=12, decorators=None, re_flags=None, to_args=None, to_kwargs=None, prepend_locale=True, merge_query=False): """ Return a url matcher suited for urlpatterns. pa...

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40.923077

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def add_text_memo(self, memo_text): """Set the memo for the transaction to a new :class:`TextMemo <stellar_base.memo.TextMemo>`. :param memo_text: The text for the memo to add. :type memo_text: str, bytes :return: This builder instance. """ memo_text = memo.Text...

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33.181818

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def save(self, saveLocation, outName): """ Saves a featureset object to a feature class Input: saveLocation - output location of the data outName - name of the table the data will be saved to Types: *.csv - CSV file returned ...

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37.629032

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def _generate_ascii(self, matrix, foreground, background): """ Generates an identicon "image" in the ASCII format. The image will just output the matrix used to generate the identicon. Arguments: matrix - Matrix describing which blocks in the identicon should be pai...

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33.782609

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def findFile(self, fname, numtype): """ Function that finds the associated file for fname when Fname is time or NDump. Parameters ---------- fname : string The name of the file we are looking for. numType : string Designates how this funct...

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39.275

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def _load_config(self): """ Loads the configuration from YAML, if no override config was passed in initially. """ if ( self.config ): # any config being pre-set at init will short circuit out, but not a plain {} return # Verify that we're in a project r...

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40.148148

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def database_names(self, session=None): """**DEPRECATED**: Get a list of the names of all databases on the connected server. :Parameters: - `session` (optional): a :class:`~pymongo.client_session.ClientSession`. .. versionchanged:: 3.7 Deprecated. Use :...

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36.470588

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def make_stream( name, # type: Text bin_file, # type: RawIOBase mode="r", # type: Text buffering=-1, # type: int encoding=None, # type: Optional[Text] errors=None, # type: Optional[Text] newline="", # type: Optional[Text] line_buffering=False, # type: bool **kwargs # type: A...

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29.288462

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def get_note(self, note_id): """ Get a loan note that you've invested in by ID Parameters ---------- note_id : int The note ID Returns ------- dict A dictionary representing the matching note or False Examples ---...

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31.056604

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def effective_rules(self, context=None): """ Get effective rules for this rebulk object and its children. :param context: :type context: :return: :rtype: """ rules = Rules() rules.extend(self._rules) for rebulk in self._rebulks: ...

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29.357143

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def verify(self, data, signature): """Verify the signature of a sequence of bytes. Verify the signature of a sequence of bytes using the verifying (public) key and the data that was originally signed, otherwise throws an exception. :param bytes data: A sequence of bytes that we...

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44.5

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def order_error(subtag, got, expected): """ Output an error indicating that tags were out of order. """ options = SUBTAG_TYPES[expected:] if len(options) == 1: expect_str = options[0] elif len(options) == 2: expect_str = '%s or %s' % (options[0], options[1]) else: exp...

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38.785714

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def _get_list_key(self, obj, key, vc, obj_nex_id=None): """Either: * Returns a list, or * Generates a MissingExpectedListWarning and returns None (if the value is not a dict or list) """ k = obj.get(key) if k is None: return None ...

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36.7

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def check_infile(filename): """Check text file exisitense. Argument: filename: text file of bulk updating """ if os.path.isfile(filename): domain = os.path.basename(filename).split('.txt')[0] return domain else: sys.stderr.write("ERROR: %s : No such file\n" % filena...

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25.461538

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def set_properties(obj, values): """ Sets values of some (all) object properties. If some properties do not exist or introspection fails they are just silently skipped and no errors thrown. :param obj: an object to write properties to. :param values: a map, containing ...

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32.125

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def rr_history(self, ips): """Get the domains related to input ips. Args: ips: an enumerable of strings as ips Returns: An enumerable of resource records and features """ api_name = 'opendns-rr_history' fmt_url_path = u'dnsdb/ip/a/{0}.json' ...

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33

14.181818

def fql(self, query, args=None, post_args=None): """FQL query. Example query: "SELECT affiliations FROM user WHERE uid = me()" """ args = args or {} if self.access_token: if post_args is not None: post_args["access_token"] = self.access_token ...

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def get_customer_group_by_id(cls, customer_group_id, **kwargs): """Find CustomerGroup Return single instance of CustomerGroup by its ID. This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.get_cus...

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44.714286

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def loop(self): """ Run the demo suite in a loop. """ logging.info("Running %s in loop mode." % self.service_name) res = None while True: try: res = self.run() time.sleep(self.loop_duration) except KeyboardInterrupt...

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33.777778

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def iterSourceCode(paths): """ Iterate over all Python source files in C{paths}. @param paths: A list of paths. Directories will be recursed into and any .py files found will be yielded. Any non-directories will be yielded as-is. """ for path in paths: if os.path.isdir(pat...

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35.411765

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def shortname(inputid): # type: (Text) -> Text """Returns the last segment of the provided fragment or path.""" parsed_id = urllib.parse.urlparse(inputid) if parsed_id.fragment: return parsed_id.fragment.split(u"/")[-1] return parsed_id.path.split(u"/")[-1]

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46.166667

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def dbf_asdict(fn, usecols=None, keystyle='ints'): """Return data from dbf file fn as a dict. fn: str The filename string. usecols: seqence The columns to use, 0-based. keystyle: str 'ints' or 'names' accepted. Should be 'ints' (default) when this function is given to ...

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26.216216

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