kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def update_publisher_asset(self, upload_stream, publisher_name, asset_type=None, file_name=None, **kwargs): """UpdatePublisherAsset. [Preview API] Update publisher asset like logo. It accepts asset file as an octet stream and file name is passed in header values. :param object upload_stream: Str...	[ "def", "update_publisher_asset", "(", "self", ",", "upload_stream", ",", "publisher_name", ",", "asset_type", "=", "None", ",", "file_name", "=", "None", ",", "", "", "kwargs", ")", ":", "route_values", "=", "{", "}", "if", "publisher_name", "is", "not", ...	56.785714	25.321429
def _open_path_window(self): """ Hides this window and opens path window. Passes all needed data and kwargs. """ self.data['top_assistant'] = self.top_assistant self.data['current_main_assistant'] = self.get_current_main_assistant() self.data['kwargs'] = self.kwar...	[ "def", "_open_path_window", "(", "self", ")", ":", "self", ".", "data", "[", "'top_assistant'", "]", "=", "self", ".", "top_assistant", "self", ".", "data", "[", "'current_main_assistant'", "]", "=", "self", ".", "get_current_main_assistant", "(", ")", "self",...	39	9.6
def files_stat(self, path, **kwargs): """Returns basic ``stat`` information for an MFS file (including its hash). .. code-block:: python >>> c.files_stat("/test") {'Hash': 'QmUNLLsPACCz1vLxQVkXqqLX5R1X345qqfHbsf67hvA3Nn', 'Size': 0, 'CumulativeSize': 4, 'Ty...	[ "def", "files_stat", "(", "self", ",", "path", ",", "", "", "kwargs", ")", ":", "args", "=", "(", "path", ",", ")", "return", "self", ".", "_client", ".", "request", "(", "'/files/stat'", ",", "args", ",", "decoder", "=", "'json'", ",", "", "",...	29.545455	19.636364
def policy_definition_present(name, policy_rule=None, policy_type=None, mode=None, display_name=None, description=None, metadata=None, parameters=None, policy_rule_json=None, policy_rule_file=None, template='jinja', source_hash=None, source_hash_name=None, ski...	[ "def", "policy_definition_present", "(", "name", ",", "policy_rule", "=", "None", ",", "policy_type", "=", "None", ",", "mode", "=", "None", ",", "display_name", "=", "None", ",", "description", "=", "None", ",", "metadata", "=", "None", ",", "parameters", ...	39.621723	27.441948
def remove(self, observableElement): """ remove an obsrvable element :param str observableElement: the name of the observable element """ if observableElement in self._observables: self._observables.remove(observableElement)	[ "def", "remove", "(", "self", ",", "observableElement", ")", ":", "if", "observableElement", "in", "self", ".", "_observables", ":", "self", ".", "_observables", ".", "remove", "(", "observableElement", ")" ]	33.75	13.25
def _comparator_lt(filter_value, tested_value): """ Tests if the filter value is strictly greater than the tested value tested_value < filter_value """ if is_string(filter_value): value_type = type(tested_value) try: # Try a conversion filter_value = value_ty...	[ "def", "_comparator_lt", "(", "filter_value", ",", "tested_value", ")", ":", "if", "is_string", "(", "filter_value", ")", ":", "value_type", "=", "type", "(", "tested_value", ")", "try", ":", "# Try a conversion", "filter_value", "=", "value_type", "(", "filter_...	29.821429	13.535714
def expKEGG(organism,names_KEGGids): """ Gets all KEGG pathways for an organism :param organism: an organism as listed in organismsKEGG() :param names_KEGGids: a Pandas dataframe with the columns 'gene_name': and 'KEGGid' as reported from idsKEGG(organism) (or a subset of it). :returns df: a Pand...	[ "def", "expKEGG", "(", "organism", ",", "names_KEGGids", ")", ":", "#print \"KEGG API: http://rest.kegg.jp/list/pathway/\"+organism", "#sys.stdout.flush()", "kegg_paths", "=", "urlopen", "(", "\"http://rest.kegg.jp/list/pathway/\"", "+", "organism", ")", ".", "read", "(", "...	39.942308	17.711538
def from_data(cls, data): """Create gyroscope stream from data array Parameters ------------------- data : (N, 3) ndarray Data array of angular velocities (rad/s) Returns ------------------- GyroStream Stream object """ if...	[ "def", "from_data", "(", "cls", ",", "data", ")", ":", "if", "not", "data", ".", "shape", "[", "1", "]", "==", "3", ":", "raise", "ValueError", "(", "\"Gyroscope data must have shape (N, 3)\"", ")", "instance", "=", "cls", "(", ")", "instance", ".", "dat...	25	18.315789
def _tryMatch(self, textToMatchObject): """Try to find themselves in the text. Returns (count, matchedRule) or (None, None) if doesn't match """ # andreikop: This check is not described in kate docs, and I haven't found it in the code if not textToMatchObject.isWordStart: ...	[ "def", "_tryMatch", "(", "self", ",", "textToMatchObject", ")", ":", "# andreikop: This check is not described in kate docs, and I haven't found it in the code", "if", "not", "textToMatchObject", ".", "isWordStart", ":", "return", "None", "index", "=", "self", ".", "_tryMat...	47.653846	25.846154
def _get_sector(self, channel, nlines, ncols): """Determine which sector was scanned""" if self._is_vis(channel): margin = 100 sectors_ref = self.vis_sectors else: margin = 50 sectors_ref = self.ir_sectors for (nlines_ref, ncols_ref), sect...	[ "def", "_get_sector", "(", "self", ",", "channel", ",", "nlines", ",", "ncols", ")", ":", "if", "self", ".", "_is_vis", "(", "channel", ")", ":", "margin", "=", "100", "sectors_ref", "=", "self", ".", "vis_sectors", "else", ":", "margin", "=", "50", ...	33.933333	15.933333
def unregister(self, document): """ Unregisters an existing document, so that this document is no longer available. This function is mainly used during plugin deactivation. :param document: Name of the document """ if document not in self.documents.keys(): s...	[ "def", "unregister", "(", "self", ",", "document", ")", ":", "if", "document", "not", "in", "self", ".", "documents", ".", "keys", "(", ")", ":", "self", ".", "log", ".", "warning", "(", "\"Can not unregister document %s\"", "%", "document", ")", "else", ...	38.230769	20.538462
def rlm(data, xseq, params): """ Fit RLM """ X = sm.add_constant(data['x']) Xseq = sm.add_constant(xseq) init_kwargs, fit_kwargs = separate_method_kwargs( params['method_args'], sm.RLM, sm.RLM.fit) model = sm.RLM(data['y'], X, init_kwargs) results = model.fit(**fit_kwargs) ...	[ "def", "rlm", "(", "data", ",", "xseq", ",", "", "", "params", ")", ":", "X", "=", "sm", ".", "add_constant", "(", "data", "[", "'x'", "]", ")", "Xseq", "=", "sm", ".", "add_constant", "(", "xseq", ")", "init_kwargs", ",", "fit_kwargs", "=", "s...	27.2	17.3
def plugins(): '''Display some details about the local plugins''' plugins = current_app.config['PLUGINS'] for name, description in entrypoints.ENTRYPOINTS.items(): echo('{0} ({1})'.format(white(description), name)) if name == 'udata.themes': actives = [current_app.config['THEME']...	[ "def", "plugins", "(", ")", ":", "plugins", "=", "current_app", ".", "config", "[", "'PLUGINS'", "]", "for", "name", ",", "description", "in", "entrypoints", ".", "ENTRYPOINTS", ".", "items", "(", ")", ":", "echo", "(", "'{0} ({1})'", ".", "format", "(",...	44.538462	15.769231
def get_server_id(): ''' Provides an integer based on the FQDN of a machine. Useful as server-id in MySQL replication or anywhere else you'll need an ID like this. ''' # Provides: # server_id if salt.utils.platform.is_proxy(): server_id = {} else: use_crc = __opts_...	[ "def", "get_server_id", "(", ")", ":", "# Provides:", "# server_id", "if", "salt", ".", "utils", ".", "platform", ".", "is_proxy", "(", ")", ":", "server_id", "=", "{", "}", "else", ":", "use_crc", "=", "__opts__", ".", "get", "(", "'server_id_use_crc'",...	37.541667	26.958333
def handle(self, args, *options): """ Alter the tables """ from categories.migration import drop_field if 'app_name' not in options or 'model_name' not in options or 'field_name' not in options: raise CommandError("You must specify an Application name, a Model name ...	[ "def", "handle", "(", "self", ",", "", "args", ",", "", "*", "options", ")", ":", "from", "categories", ".", "migration", "import", "drop_field", "if", "'app_name'", "not", "in", "options", "or", "'model_name'", "not", "in", "options", "or", "'field_name...	46.333333	26.333333
def run_mutect(job, tumor_bam, normal_bam, univ_options, mutect_options): """ Spawn a MuTect job for each chromosome on the DNA bams. :param dict tumor_bam: Dict of bam and bai for tumor DNA-Seq :param dict normal_bam: Dict of bam and bai for normal DNA-Seq :param dict univ_options: Dict of univers...	[ "def", "run_mutect", "(", "job", ",", "tumor_bam", ",", "normal_bam", ",", "univ_options", ",", "mutect_options", ")", ":", "# Get a list of chromosomes to handle", "if", "mutect_options", "[", "'chromosomes'", "]", ":", "chromosomes", "=", "mutect_options", "[", "'...	47.529412	22.764706
def get_member_calendar(self, max_results=0): ''' a method to retrieve the upcoming events for all groups member belongs to :param max_results: [optional] integer with number of events to include :return: dictionary with list of event details inside [json] key event_details = s...	[ "def", "get_member_calendar", "(", "self", ",", "max_results", "=", "0", ")", ":", "# https://www.meetup.com/meetup_api/docs/self/calendar/#list\r", "title", "=", "'%s.get_member_calendar'", "%", "self", ".", "__class__", ".", "__name__", "# validate inputs\r", "input_field...	34	24.444444
def _uploadStream(self, fileName, update=False, encrypt=True): """ Yields a context manager that can be used to write to the bucket with a stream. See :class:`~toil.jobStores.utils.WritablePipe` for an example. Will throw assertion error if the file shouldn't be updated and yet ...	[ "def", "_uploadStream", "(", "self", ",", "fileName", ",", "update", "=", "False", ",", "encrypt", "=", "True", ")", ":", "blob", "=", "self", ".", "bucket", ".", "blob", "(", "bytes", "(", "fileName", ")", ",", "encryption_key", "=", "self", ".", "s...	39.444444	19.666667
def Rforce(self,R,z,phi=0.,t=0.,v=None): """ NAME: Rforce PURPOSE: evaluate cylindrical radial force F_R (R,z) INPUT: R - Cylindrical Galactocentric radius (can be Quantity) z - vertical height (can be Quantity) phi - azimuth...	[ "def", "Rforce", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ",", "v", "=", "None", ")", ":", "return", "self", ".", "_Rforce_nodecorator", "(", "R", ",", "z", ",", "phi", "=", "phi", ",", "t", "=", "t", ","...	19	25.875
def create(vm_): r''' Create a single VM from a data dict. vm\_ The dictionary use to create a VM. Optional vm\_ dict options for overwriting template: region_id Optional - OpenNebula Zone ID memory Optional - In MB cpu Optional - Percent of host CPU to a...	[ "def", "create", "(", "vm_", ")", ":", "try", ":", "# Check for required profile parameters before sending any API calls.", "if", "vm_", "[", "'profile'", "]", "and", "config", ".", "is_profile_configured", "(", "__opts__", ",", "__active_provider_name__", "or", "'openn...	32.735849	21.801887
def session(self): """Provide access to request session with local cache enabled.""" if self._session is None: self._session = cachecontrol.CacheControl( requests.Session(), cache=caches.FileCache('.tvdb_cache')) return self._session	[ "def", "session", "(", "self", ")", ":", "if", "self", ".", "_session", "is", "None", ":", "self", ".", "_session", "=", "cachecontrol", ".", "CacheControl", "(", "requests", ".", "Session", "(", ")", ",", "cache", "=", "caches", ".", "FileCache", "(",...	42.142857	10.571429
def blend_mode(self): """BlendMode: The blend mode used for drawing operations.""" blend_mode_ptr = ffi.new('int *') check_int_err(lib.SDL_GetRenderDrawBlendMode(self._ptr, blend_mode_ptr)) return BlendMode(blend_mode_ptr[0])	[ "def", "blend_mode", "(", "self", ")", ":", "blend_mode_ptr", "=", "ffi", ".", "new", "(", "'int *'", ")", "check_int_err", "(", "lib", ".", "SDL_GetRenderDrawBlendMode", "(", "self", ".", "_ptr", ",", "blend_mode_ptr", ")", ")", "return", "BlendMode", "(", ...	50.6	12.6
def set_motor_position(self, motor_name, position): """ Sets the motor target position. """ self.call_remote_api('simxSetJointTargetPosition', self.get_object_handle(motor_name), position, sending=True)	[ "def", "set_motor_position", "(", "self", ",", "motor_name", ",", "position", ")", ":", "self", ".", "call_remote_api", "(", "'simxSetJointTargetPosition'", ",", "self", ".", "get_object_handle", "(", "motor_name", ")", ",", "position", ",", "sending", "=", "Tru...	50	9.5
def b(self, number): """A parameter to tune the amount of field length normalisation that is applied when calculating relevance scores. A value of 0 will completely disable any normalisation and a value of 1 will fully normalise field lengths. The default is 0.75. Values of b wi...	[ "def", "b", "(", "self", ",", "number", ")", ":", "if", "number", "<", "0", ":", "self", ".", "_b", "=", "0", "elif", "number", ">", "1", ":", "self", ".", "_b", "=", "1", "else", ":", "self", ".", "_b", "=", "number" ]	35.071429	18.214286
def settings(request=None): """ Add the settings object to the template context. """ from yacms.conf import settings allowed_settings = settings.TEMPLATE_ACCESSIBLE_SETTINGS template_settings = TemplateSettings(settings, allowed_settings) template_settings.update(DEPRECATED) # This is...	[ "def", "settings", "(", "request", "=", "None", ")", ":", "from", "yacms", ".", "conf", "import", "settings", "allowed_settings", "=", "settings", ".", "TEMPLATE_ACCESSIBLE_SETTINGS", "template_settings", "=", "TemplateSettings", "(", "settings", ",", "allowed_setti...	38.5	21.6
def create_profiles(self, prefix, weeks, ip_user=False): """Create the user profiles for the given weeks.""" # Future: Add a time range in weeks for how long a user is considered # as the same user. # Count accessed records record_counter = {} for year, week in w...	[ "def", "create_profiles", "(", "self", ",", "prefix", ",", "weeks", ",", "ip_user", "=", "False", ")", ":", "# Future: Add a time range in weeks for how long a user is considered", "# as the same user.", "# Count accessed records", "record_counter", "=", "{", "}", "...	37.32	18.4
def offload_expired_service_cargo(self, service): """Remove docker images for a specific service. This method will call itself recursively for dependents and dependencies. :param service: :return None: """ # TODO: move offload cargo logic to this method self._s...	[ "def", "offload_expired_service_cargo", "(", "self", ",", "service", ")", ":", "# TODO: move offload cargo logic to this method", "self", ".", "_service_map", "(", "service", ",", "self", ".", "_offload_cargo", ",", "descending", "=", "True", ")" ]	41	16.666667
def create(message_type, priority=0): """Create a ProtocolMessage.""" message = protobuf.ProtocolMessage() message.type = message_type message.priority = priority return message	[ "def", "create", "(", "message_type", ",", "priority", "=", "0", ")", ":", "message", "=", "protobuf", ".", "ProtocolMessage", "(", ")", "message", ".", "type", "=", "message_type", "message", ".", "priority", "=", "priority", "return", "message" ]	32	7.166667
def render_head(self, ctx, data): """ This renderer calculates content for the <head> tag by concatenating the values from L{getHeadContent} and the overridden L{head} method. """ req = inevow.IRequest(ctx) more = getattr(self.fragment, 'head', None) if more is no...	[ "def", "render_head", "(", "self", ",", "ctx", ",", "data", ")", ":", "req", "=", "inevow", ".", "IRequest", "(", "ctx", ")", "more", "=", "getattr", "(", "self", ".", "fragment", ",", "'head'", ",", "None", ")", "if", "more", "is", "not", "None", ...	39.307692	14.230769
def is_bytes(string): """Check if a string is a bytes instance :param Union[str, bytes] string: A string that may be string or bytes like :return: Whether the provided string is a bytes type or not :rtype: bool """ if six.PY3 and isinstance(string, (bytes, memoryview, bytearray)): # noqa ...	[ "def", "is_bytes", "(", "string", ")", ":", "if", "six", ".", "PY3", "and", "isinstance", "(", "string", ",", "(", "bytes", ",", "memoryview", ",", "bytearray", ")", ")", ":", "# noqa", "return", "True", "elif", "six", ".", "PY2", "and", "isinstance", ...	35.833333	23.083333
def K(self, parm): """ Returns the Gram Matrix Parameters ---------- parm : np.ndarray Parameters for the Gram Matrix Returns ---------- - Gram Matrix (np.ndarray) """ return ARD_K_matrix(self.X, parm) + np.identity(self.X.shape[0])*(...	[ "def", "K", "(", "self", ",", "parm", ")", ":", "return", "ARD_K_matrix", "(", "self", ".", "X", ",", "parm", ")", "+", "np", ".", "identity", "(", "self", ".", "X", ".", "shape", "[", "0", "]", ")", "", "(", "10", "*", "-", "10", ")" ]	24.307692	19.846154
def parse(self, rrstr): # type: (bytes) -> None ''' Parse a Rock Ridge Time Stamp record out of a string. Parameters: rrstr - The string to parse the record out of. Returns: Nothing. ''' if self._initialized: raise pycdlibexception.P...	[ "def", "parse", "(", "self", ",", "rrstr", ")", ":", "# type: (bytes) -> None", "if", "self", ".", "_initialized", ":", "raise", "pycdlibexception", ".", "PyCdlibInternalError", "(", "'TF record already initialized!'", ")", "# We assume that the caller has already checked t...	35.142857	25.485714
def find_nested_meta_first(d, prop_name, version): """Returns obj. for badgerfish and val for hbf. Appropriate for nested literals""" if _is_badgerfish_version(version): return find_nested_meta_first_bf(d, prop_name) p = '^' + prop_name return d.get(p)	[ "def", "find_nested_meta_first", "(", "d", ",", "prop_name", ",", "version", ")", ":", "if", "_is_badgerfish_version", "(", "version", ")", ":", "return", "find_nested_meta_first_bf", "(", "d", ",", "prop_name", ")", "p", "=", "'^'", "+", "prop_name", "return"...	45.166667	10.5
def fromFile(path_or_buffer): """Creates abstraction using path to file :param str path_or_buffer: path to tex file or buffer :return: TreeOfContents object """ return TOC.fromLatex(open(path_or_buffer).read() if isinstance(path_or_buffer, str) ...	[ "def", "fromFile", "(", "path_or_buffer", ")", ":", "return", "TOC", ".", "fromLatex", "(", "open", "(", "path_or_buffer", ")", ".", "read", "(", ")", "if", "isinstance", "(", "path_or_buffer", ",", "str", ")", "else", "path_or_buffer", ")" ]	39.666667	13.666667
def _get_function_type(self, function_name): """ Returns the function object that matches the provided name. Only Fn:: and Ref functions are supported here so that other functions specific to troposphere are skipped. """ if (function_name.startswith("Fn::") and ...	[ "def", "_get_function_type", "(", "self", ",", "function_name", ")", ":", "if", "(", "function_name", ".", "startswith", "(", "\"Fn::\"", ")", "and", "function_name", "[", "4", ":", "]", "in", "self", ".", "inspect_functions", ")", ":", "return", "self", "...	47.363636	15.181818
def rewind(self, count): """Rewind index.""" if count > self._index: # pragma: no cover raise ValueError("Can't rewind past beginning!") self._index -= count	[ "def", "rewind", "(", "self", ",", "count", ")", ":", "if", "count", ">", "self", ".", "_index", ":", "# pragma: no cover", "raise", "ValueError", "(", "\"Can't rewind past beginning!\"", ")", "self", ".", "_index", "-=", "count" ]	27.142857	19.857143
def domain_sites(): """ Get a list of domains Each domain is an attribute dict with name, site_id and settings """ if not hasattr(env,'domains'): sites = _get_django_sites() site_ids = sites.keys() site_ids.sort() domains = [] for id in site_ids...	[ "def", "domain_sites", "(", ")", ":", "if", "not", "hasattr", "(", "env", ",", "'domains'", ")", ":", "sites", "=", "_get_django_sites", "(", ")", "site_ids", "=", "sites", ".", "keys", "(", ")", "site_ids", ".", "sort", "(", ")", "domains", "=", "["...	29.771429	17.771429
def do_json_set_many(self, params): """ \x1b[1mNAME\x1b[0m json_set_many - like `json_set`, but for multiple key/value pairs \x1b[1mSYNOPSIS\x1b[0m json_set_many <path> <keys> <value> <value_type> <keys1> <value1> <value_type1> ... \x1b[1mDESCRIPTION\x1b[0m If the key exists and the va...	[ "def", "do_json_set_many", "(", "self", ",", "params", ")", ":", "# Ensure we have a balance set of (key, value, type) tuples.", "if", "len", "(", "params", ".", "keys_values_types", ")", "%", "3", "!=", "0", ":", "self", ".", "show_output", "(", "'Bad list of param...	34.191176	23.691176
def load_transcript_fpkm_dict_from_gtf( gtf_path, transcript_id_column_name="reference_id", fpkm_column_name="FPKM", feature_column_name="feature"): """ Load a GTF file generated by StringTie which contains transcript-level quantification of abundance. Returns a dictionary ma...	[ "def", "load_transcript_fpkm_dict_from_gtf", "(", "gtf_path", ",", "transcript_id_column_name", "=", "\"reference_id\"", ",", "fpkm_column_name", "=", "\"FPKM\"", ",", "feature_column_name", "=", "\"feature\"", ")", ":", "df", "=", "gtfparse", ".", "read_gtf", "(", "g...	39.25	16.375
def visible(self, status): """Turn the display on/off (quickly)""" self._display_control = ByteUtil.apply_flag(self._display_control, Command.DISPLAY_ON, status) self.command(self._display_control)	[ "def", "visible", "(", "self", ",", "status", ")", ":", "self", ".", "_display_control", "=", "ByteUtil", ".", "apply_flag", "(", "self", ".", "_display_control", ",", "Command", ".", "DISPLAY_ON", ",", "status", ")", "self", ".", "command", "(", "self", ...	54.5	19.75
def qubit_adjacent_lifted_gate(i, matrix, n_qubits): """ Lifts input k-qubit gate on adjacent qubits starting from qubit i to complete Hilbert space of dimension 2 ** num_qubits. Ex: 1-qubit gate, lifts from qubit i Ex: 2-qubit gate, lifts from qubits (i+1, i) Ex: 3-qubit gate, lifts from qubit...	[ "def", "qubit_adjacent_lifted_gate", "(", "i", ",", "matrix", ",", "n_qubits", ")", ":", "n_rows", ",", "n_cols", "=", "matrix", ".", "shape", "assert", "n_rows", "==", "n_cols", ",", "'Matrix must be square'", "gate_size", "=", "np", ".", "log2", "(", "n_ro...	45.044444	24.6
def parse_characters(self, character_page): """Parses the DOM and returns media character attributes in the sidebar. :type character_page: :class:`bs4.BeautifulSoup` :param character_page: MAL character page's DOM :rtype: dict :return: character attributes. """ media_info = self.parse_sid...	[ "def", "parse_characters", "(", "self", ",", "character_page", ")", ":", "media_info", "=", "self", ".", "parse_sidebar", "(", "character_page", ")", "try", ":", "character_title", "=", "filter", "(", "lambda", "x", ":", "u'Characters'", "in", "x", ".", "tex...	39.114286	20.571429
def describe_version(self): """ Query the Cassandra server for the version. :returns: string -- the version tag """ def _vers(client): return client.describe_version() d = self._connection() d.addCallback(_vers) return d	[ "def", "describe_version", "(", "self", ")", ":", "def", "_vers", "(", "client", ")", ":", "return", "client", ".", "describe_version", "(", ")", "d", "=", "self", ".", "_connection", "(", ")", "d", ".", "addCallback", "(", "_vers", ")", "return", "d" ...	23.916667	14.25
def observed_data_to_xarray(self): """Convert observed data to xarray.""" posterior_model = self.posterior_model if self.dims is None: dims = {} else: dims = self.dims observed_names = self.observed_data if isinstance(observed_names, str): ...	[ "def", "observed_data_to_xarray", "(", "self", ")", ":", "posterior_model", "=", "self", ".", "posterior_model", "if", "self", ".", "dims", "is", "None", ":", "dims", "=", "{", "}", "else", ":", "dims", "=", "self", ".", "dims", "observed_names", "=", "s...	43.736842	14.526316
def add_permission_role(self, role, perm_view): """ Add permission-ViewMenu object to Role :param role: The role object :param perm_view: The PermissionViewMenu object """ if perm_view not in role.permissions: try: ...	[ "def", "add_permission_role", "(", "self", ",", "role", ",", "perm_view", ")", ":", "if", "perm_view", "not", "in", "role", ".", "permissions", ":", "try", ":", "role", ".", "permissions", ".", "append", "(", "perm_view", ")", "self", ".", "get_session", ...	35.85	13.15
def emit(self, action, event): """ Send an event to all the client listening for notifications :param action: Action name :param event: Event to send """ NotificationManager.instance().emit(action, event, project_id=self.id)	[ "def", "emit", "(", "self", ",", "action", ",", "event", ")", ":", "NotificationManager", ".", "instance", "(", ")", ".", "emit", "(", "action", ",", "event", ",", "project_id", "=", "self", ".", "id", ")" ]	33.25	15.75
def remove_duplicate_faces(self): """ On the current mesh remove any faces which are duplicates. Alters ---------- self.faces : removes duplicates """ unique, inverse = grouping.unique_rows(np.sort(self.faces, axis=1)) self.update_faces(unique)	[ "def", "remove_duplicate_faces", "(", "self", ")", ":", "unique", ",", "inverse", "=", "grouping", ".", "unique_rows", "(", "np", ".", "sort", "(", "self", ".", "faces", ",", "axis", "=", "1", ")", ")", "self", ".", "update_faces", "(", "unique", ")" ]	30	16.4
def create_event(options, config, credentials): """ Create event in calendar with sms reminder. """ try: http = credentials.authorize(httplib2.Http()) service = build("calendar", "v3", http=http) event = { "summary": options.message, "location": "", ...	[ "def", "create_event", "(", "options", ",", "config", ",", "credentials", ")", ":", "try", ":", "http", "=", "credentials", ".", "authorize", "(", "httplib2", ".", "Http", "(", ")", ")", "service", "=", "build", "(", "\"calendar\"", ",", "\"v3\"", ",", ...	31.517241	19.931034
def get_grade_systems(self): """Gets all ``GradeSystems``. In plenary mode, the returned list contains all known grade systems or an error results. Otherwise, the returned list may contain only those grade systems that are accessible through this session. return: (osid....	[ "def", "get_grade_systems", "(", "self", ")", ":", "# Implemented from template for", "# osid.resource.ResourceLookupSession.get_resources", "# NOTE: This implementation currently ignores plenary view", "collection", "=", "JSONClientValidated", "(", "'grading'", ",", "collection", "=...	48.318182	23.590909
def is_primitive(var): """ Checks if an object is in ( float, long, str, int, dict, list, unicode, tuple, set, frozenset, datetime.datetime, datetime.timedelta ) """ primitives = ( float, long, str, int, dict, list, unicode, tuple, set, frozenset, datetime.datetime, datetime.timedelta, type(None) ) ...	[ "def", "is_primitive", "(", "var", ")", ":", "primitives", "=", "(", "float", ",", "long", ",", "str", ",", "int", ",", "dict", ",", "list", ",", "unicode", ",", "tuple", ",", "set", ",", "frozenset", ",", "datetime", ".", "datetime", ",", "datetime"...	41.8	30.6
def modify_image_attribute(self, image_id, attribute='launchPermission', operation='add', user_ids=None, groups=None, product_codes=None): """ Changes an attribute of an image. :type image_id: string :param image_id: The imag...	[ "def", "modify_image_attribute", "(", "self", ",", "image_id", ",", "attribute", "=", "'launchPermission'", ",", "operation", "=", "'add'", ",", "user_ids", "=", "None", ",", "groups", "=", "None", ",", "product_codes", "=", "None", ")", ":", "params", "=", ...	40.567568	21.540541
def evaluate(args, embedding, vocab, global_step, eval_analogy=False): """Evaluation helper""" if 'eval_tokens' not in globals(): global eval_tokens eval_tokens_set = evaluation.get_tokens_in_evaluation_datasets(args) if not args.no_eval_analogy: eval_tokens_set.update(vocab...	[ "def", "evaluate", "(", "args", ",", "embedding", ",", "vocab", ",", "global_step", ",", "eval_analogy", "=", "False", ")", ":", "if", "'eval_tokens'", "not", "in", "globals", "(", ")", ":", "global", "eval_tokens", "eval_tokens_set", "=", "evaluation", ".",...	36.416667	21.055556
def to_1000(portal_setup): """Initial version to 1000 :param portal_setup: The portal_setup tool """ logger.info("Run all import steps from SENAITE LIMS ...") context = portal_setup._getImportContext(PROFILE_ID) portal = context.getSite() setup_html_filter(portal) portal_setup.runAllIm...	[ "def", "to_1000", "(", "portal_setup", ")", ":", "logger", ".", "info", "(", "\"Run all import steps from SENAITE LIMS ...\"", ")", "context", "=", "portal_setup", ".", "_getImportContext", "(", "PROFILE_ID", ")", "portal", "=", "context", ".", "getSite", "(", ")"...	33.833333	16.583333
def get_value(self, variant_line=None, variant_dict=None, entry=None, raw_entry=None, vcf_header=None, csq_format=None, dict_key=None, individual_id=None): """ Return the value as specified by plugin Get value will return one value or None if no correct value is found....	[ "def", "get_value", "(", "self", ",", "variant_line", "=", "None", ",", "variant_dict", "=", "None", ",", "entry", "=", "None", ",", "raw_entry", "=", "None", ",", "vcf_header", "=", "None", ",", "csq_format", "=", "None", ",", "dict_key", "=", "None", ...	39.531746	14.674603
def parse(self, text): """Parse the given text, return a list of Keywords.""" token_stream = self.lexer.tokenize(text) return self.expr(token_stream, next(token_stream))	[ "def", "parse", "(", "self", ",", "text", ")", ":", "token_stream", "=", "self", ".", "lexer", ".", "tokenize", "(", "text", ")", "return", "self", ".", "expr", "(", "token_stream", ",", "next", "(", "token_stream", ")", ")" ]	47.5	11
def derivatives_factory(cls, coef, domain, kind, **kwargs): """ Given some coefficients, return a the derivative of a certain kind of orthogonal polynomial defined over a specific domain. """ basis_polynomial = cls._basis_polynomial_factory(kind) return basis_polynomial(...	[ "def", "derivatives_factory", "(", "cls", ",", "coef", ",", "domain", ",", "kind", ",", "", "", "kwargs", ")", ":", "basis_polynomial", "=", "cls", ".", "_basis_polynomial_factory", "(", "kind", ")", "return", "basis_polynomial", "(", "coef", ",", "domain"...	41.75	19
def export_xhtml(html, filename, image_tag=None): """ Export the contents of the ConsoleWidget as XHTML with inline SVGs. Parameters: ----------- html : str, A utf-8 encoded Python string containing the Qt HTML to export. filename : str The file to be saved. image_tag : callab...	[ "def", "export_xhtml", "(", "html", ",", "filename", ",", "image_tag", "=", "None", ")", ":", "if", "image_tag", "is", "None", ":", "image_tag", "=", "default_image_tag", "else", ":", "image_tag", "=", "ensure_utf8", "(", "image_tag", ")", "with", "open", ...	33.433333	20.9
def loads(*strings, missing=Missing.silent): """ Read a `.Configuration` instance from strings. :param strings: configuration contents :param missing: policy to be used when a configured key is missing, either as a `.Missing` instance or a default value :return: a `.Configuration` instance ...	[ "def", "loads", "(", "", "strings", ",", "missing", "=", "Missing", ".", "silent", ")", ":", "return", "Configuration", "(", "", "(", "yaml", ".", "safe_load", "(", "string", ")", "for", "string", "in", "strings", ")", ",", "missing", "=", "missing",...	42.636364	18.090909
def prepareToCalcEndOfPrdvP(self): ''' Prepare to calculate end-of-period marginal value by creating an array of market resources that the agent could have next period, considering the grid of end-of-period assets and the distribution of shocks he might experience next period. T...	[ "def", "prepareToCalcEndOfPrdvP", "(", "self", ")", ":", "KinkBool", "=", "self", ".", "Rboro", ">", "self", ".", "Rsave", "# Boolean indicating that there is actually a kink.", "# When Rboro == Rsave, this method acts just like it did in IndShock.", "# When Rboro < Rsave, the solv...	50.590164	31.213115
def hugoniot_rho_single(p, rho0, c0, s, min_strain=0.01): """ calculate density in g/cm^3 from a hugoniot curve :param p: pressure in GPa :param rho0: density at 1 bar in g/cm^3 :param c0: velocity at 1 bar in km/s :param s: slope of the velocity change :param min_strain: defining minimum v...	[ "def", "hugoniot_rho_single", "(", "p", ",", "rho0", ",", "c0", ",", "s", ",", "min_strain", "=", "0.01", ")", ":", "if", "p", "<=", "1.e-5", ":", "return", "rho0", "def", "f_diff", "(", "rho", ")", ":", "return", "hugoniot_p", "(", "rho", ",", "rh...	30.333333	15.111111
def handle_signature(self, sig, signode): """Parse the signature sig into individual nodes and append them to the signode. If ValueError is raises, parsing is aborted and the whole sig string is put into a single desc_name node. The return value is the value that identifies the ob...	[ "def", "handle_signature", "(", "self", ",", "sig", ",", "signode", ")", ":", "if", "self", ".", "_is_attr_like", "(", ")", ":", "sig_match", "=", "chpl_attr_sig_pattern", ".", "match", "(", "sig", ")", "if", "sig_match", "is", "None", ":", "raise", "Val...	42.835294	21.023529
def format_key_for_backend(self, key, remove_slash_prefix=False, trailing_slash=False): """Add a possible prefix to the key before sending it to the backend""" path = self.prefix + key if trailing_slash: if not path or path[-1] != "/": path += "/" else: ...	[ "def", "format_key_for_backend", "(", "self", ",", "key", ",", "remove_slash_prefix", "=", "False", ",", "trailing_slash", "=", "False", ")", ":", "path", "=", "self", ".", "prefix", "+", "key", "if", "trailing_slash", ":", "if", "not", "path", "or", "path...	45.454545	18.818182
def time(self, target=None): """ Get server time. Optional arguments: * target=None - Target server. """ with self.lock: if target: self.send('TIME %s' % target) else: self.send('TIME') time = '' ...	[ "def", "time", "(", "self", ",", "target", "=", "None", ")", ":", "with", "self", ".", "lock", ":", "if", "target", ":", "self", ".", "send", "(", "'TIME %s'", "%", "target", ")", "else", ":", "self", ".", "send", "(", "'TIME'", ")", "time", "=",...	29.375	12.125
def device_event_list(self, **kwargs): # noqa: E501 """List all device events. # noqa: E501 List all device events for an account. # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass asynchronous=True >>> thr...	[ "def", "device_event_list", "(", "self", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'asynchronous'", ")", ":", "return", "self", ".", "device_event_list_with...	161.2	133.96
def popone(self, key, default=_marker): """Remove specified key and return the corresponding value. If key is not found, d is returned if given, otherwise KeyError is raised. """ identity = self._title(key) for i in range(len(self._impl._items)): if self._im...	[ "def", "popone", "(", "self", ",", "key", ",", "default", "=", "_marker", ")", ":", "identity", "=", "self", ".", "_title", "(", "key", ")", "for", "i", "in", "range", "(", "len", "(", "self", ".", "_impl", ".", "_items", ")", ")", ":", "if", "...	33.055556	12.166667
def start(self): """Start the firewall.""" self.clear() self.setDefaultPolicy() self.acceptIcmp() self.acceptInput('lo')	[ "def", "start", "(", "self", ")", ":", "self", ".", "clear", "(", ")", "self", ".", "setDefaultPolicy", "(", ")", "self", ".", "acceptIcmp", "(", ")", "self", ".", "acceptInput", "(", "'lo'", ")" ]	25.833333	13
def on_epoch_end(self, epoch_info): """ Update data in visdom on push """ metrics_df = pd.DataFrame([epoch_info.result]).set_index('epoch_idx') visdom_append_metrics( self.vis, metrics_df, first_epoch=epoch_info.global_epoch_idx == 1 )	[ "def", "on_epoch_end", "(", "self", ",", "epoch_info", ")", ":", "metrics_df", "=", "pd", ".", "DataFrame", "(", "[", "epoch_info", ".", "result", "]", ")", ".", "set_index", "(", "'epoch_idx'", ")", "visdom_append_metrics", "(", "self", ".", "vis", ",", ...	32.888889	19.444444
def add_sim_errors(self, qname, sname, value, sym=True): """Add a similarity error value to self.similarity_errors.""" self.similarity_errors.loc[qname, sname] = value if sym: self.similarity_errors.loc[sname, qname] = value	[ "def", "add_sim_errors", "(", "self", ",", "qname", ",", "sname", ",", "value", ",", "sym", "=", "True", ")", ":", "self", ".", "similarity_errors", ".", "loc", "[", "qname", ",", "sname", "]", "=", "value", "if", "sym", ":", "self", ".", "similarity...	51.2	15.4
def handle_nick(self, params): """ Handle the initial setting of the user's nickname and nick changes. """ nick = params # Valid nickname? if re.search(r'[^a-zA-Z0-9\-\[\]\'`^{}_]', nick): raise IRCError.from_name('erroneusnickname', ':%s' % nick) if...	[ "def", "handle_nick", "(", "self", ",", "params", ")", ":", "nick", "=", "params", "# Valid nickname?", "if", "re", ".", "search", "(", "r'[^a-zA-Z0-9\\-\\[\\]\\'`^{}_]'", ",", "nick", ")", ":", "raise", "IRCError", ".", "from_name", "(", "'erroneusnickname'", ...	35.73913	18.391304
def render_state(self, sls, saltenv, mods, matches, local=False): ''' Render a state file and retrieve all of the include states ''' errors = [] if not local: state_data = self.client.get_state(sls, saltenv) fn_ = state_data.get('dest', False) else...	[ "def", "render_state", "(", "self", ",", "sls", ",", "saltenv", ",", "mods", ",", "matches", ",", "local", "=", "False", ")", ":", "errors", "=", "[", "]", "if", "not", "local", ":", "state_data", "=", "self", ".", "client", ".", "get_state", "(", ...	46.603261	19.36413
def send(self, payload): """ Send a payload to exchange to containing command and payload to the queue specified in config. :param command: str: name of the command we want run by WorkQueueProcessor :param payload: str: string data that will be put into the exchange's message body ...	[ "def", "send", "(", "self", ",", "payload", ")", ":", "result", "=", "self", ".", "connection", ".", "send_durable_exchange_message", "(", "self", ".", "exchange_name", ",", "payload", ")", "logging", ".", "info", "(", "\"Sent message to exchange.\"", ".", "fo...	55.8	28.6
def wait_until_element_does_not_have_focus(self, locator, timeout=None): """Waits until the element identified by `locator` doesn't have focus. You might rather want to use `Element Focus Should Not Be Set` \| Argument \| Description \| Example \| \| locator \| Selenium 2 element locator \| id=my_id \| \| timeo...	[ "def", "wait_until_element_does_not_have_focus", "(", "self", ",", "locator", ",", "timeout", "=", "None", ")", ":", "self", ".", "_info", "(", "\"Waiting until '%s' does not have focus\"", "%", "(", "locator", ")", ")", "self", ".", "_wait_until_no_error", "(", "...	57.6	23.1
def run_supernova(ctx, executable, debug, quiet, environment, command, conf, echo, dashboard): """ You can use supernova with many OpenStack clients and avoid the pain of managing multiple sets of environment variables. Getting started is easy and there's some documentation that can h...	[ "def", "run_supernova", "(", "ctx", ",", "executable", ",", "debug", ",", "quiet", ",", "environment", ",", "command", ",", "conf", ",", "echo", ",", "dashboard", ")", ":", "# Retrieve our credentials from the configuration file", "try", ":", "nova_creds", "=", ...	39.401639	23.270492
def normalize_values_queryset(values_queryset, model=None, app=None, verbosity=1): '''Shoehorn the values from one database table into another * Remove padding (leading/trailing spaces) from `CharField` and `TextField` values * Truncate all `CharField`s to the max_length of the destination `model` * Su...	[ "def", "normalize_values_queryset", "(", "values_queryset", ",", "model", "=", "None", ",", "app", "=", "None", ",", "verbosity", "=", "1", ")", ":", "model", "=", "model", "or", "values_queryset", ".", "model", "app", "=", "app", "or", "DEFAULT_APP", "new...	47.634146	24.02439
def start(self, message): """ Manually starts timer with the message. :param message: The display message. """ self._start = time.clock() VSGLogger.info("{0:<20} - Started".format(message))	[ "def", "start", "(", "self", ",", "message", ")", ":", "self", ".", "_start", "=", "time", ".", "clock", "(", ")", "VSGLogger", ".", "info", "(", "\"{0:<20} - Started\"", ".", "format", "(", "message", ")", ")" ]	29	11.5
def _get_tz(tz): """ for a tz-aware type, return an encoded zone """ zone = timezones.get_timezone(tz) if zone is None: zone = tz.utcoffset().total_seconds() return zone	[ "def", "_get_tz", "(", "tz", ")", ":", "zone", "=", "timezones", ".", "get_timezone", "(", "tz", ")", "if", "zone", "is", "None", ":", "zone", "=", "tz", ".", "utcoffset", "(", ")", ".", "total_seconds", "(", ")", "return", "zone" ]	31.333333	12.833333
def enable(self, cmd="sudo su", pattern="ssword", re_flags=re.IGNORECASE): """Attempt to become root.""" delay_factor = self.select_delay_factor(delay_factor=0) output = "" if not self.check_enable_mode(): self.write_channel(self.normalize_cmd(cmd)) time.sleep(0.3...	[ "def", "enable", "(", "self", ",", "cmd", "=", "\"sudo su\"", ",", "pattern", "=", "\"ssword\"", ",", "re_flags", "=", "re", ".", "IGNORECASE", ")", ":", "delay_factor", "=", "self", ".", "select_delay_factor", "(", "delay_factor", "=", "0", ")", "output",...	43.695652	15.826087
def _get_config(self, unit, filename): """Get a ConfigParser object for parsing a unit's config file.""" file_contents = unit.file_contents(filename) # NOTE(beisner): by default, ConfigParser does not handle options # with no value, such as the flags used in the mysql my.cnf file. ...	[ "def", "_get_config", "(", "self", ",", "unit", ",", "filename", ")", ":", "file_contents", "=", "unit", ".", "file_contents", "(", "filename", ")", "# NOTE(beisner): by default, ConfigParser does not handle options", "# with no value, such as the flags used in the mysql my.cn...	48.6	17.5
def cli(env, **args): """Allows for creating a virtual guest in a reserved capacity.""" create_args = _parse_create_args(env.client, args) create_args['primary_disk'] = args.get('primary_disk') manager = CapacityManager(env.client) capacity_id = args.get('capacity_id') test = args.get('test') ...	[ "def", "cli", "(", "env", ",", "", "", "args", ")", ":", "create_args", "=", "_parse_create_args", "(", "env", ".", "client", ",", "args", ")", "create_args", "[", "'primary_disk'", "]", "=", "args", ".", "get", "(", "'primary_disk'", ")", "manager", ...	34.833333	17.75
def _deferGenerator(g, deferred=None): """ See L{waitForDeferred}. """ result = None while 1: if deferred is None: deferred = defer.Deferred() try: result = g.next() except StopIteration: deferred.callback(result) return deferre...	[ "def", "_deferGenerator", "(", "g", ",", "deferred", "=", "None", ")", ":", "result", "=", "None", "while", "1", ":", "if", "deferred", "is", "None", ":", "deferred", "=", "defer", ".", "Deferred", "(", ")", "try", ":", "result", "=", "g", ".", "ne...	34.97561	15.658537
def flatten_links(td, _recurse=False): """Flattens relative URLs within text of a table cell to IDs and returns the result. :td: the PyQuery object for the HTML to convert :returns: the string with the links flattened to IDs """ # helper function to flatten individual strings/links def _fl...	[ "def", "flatten_links", "(", "td", ",", "_recurse", "=", "False", ")", ":", "# helper function to flatten individual strings/links", "def", "_flatten_node", "(", "c", ")", ":", "if", "isinstance", "(", "c", ",", "basestring", ")", ":", "return", "c", ".", "str...	33.375	15.916667
def load_churn(): """Load and return the churn dataset (classification). The bank marketing is a easily transformable example-dependent cost-sensitive classification dataset. Returns ------- data : Bunch Dictionary-like object, the interesting attributes are: 'data', the data to le...	[ "def", "load_churn", "(", ")", ":", "module_path", "=", "dirname", "(", "__file__", ")", "raw_data", "=", "pd", ".", "read_csv", "(", "join", "(", "module_path", ",", "'data'", ",", "'churn_tv_subscriptions.csv.gz'", ")", ",", "delimiter", "=", "','", ",", ...	39.54717	25.45283
def Space(self, n = 1, dl = 0): """空格键n次 """ self.Delay(dl) self.keyboard.tap_key(" ", n)	[ "def", "Space", "(", "self", ",", "n", "=", "1", ",", "dl", "=", "0", ")", ":", "self", ".", "Delay", "(", "dl", ")", "self", ".", "keyboard", ".", "tap_key", "(", "\" \"", ",", "n", ")" ]	23.4	6
def record_diff(old, new): """ Generate a human-readable diff of two performance records. """ return '\n'.join(difflib.ndiff( ['%s: %s' % (k, v) for op in old for k, v in op.items()], ['%s: %s' % (k, v) for op in new for k, v in op.items()], ))	[ "def", "record_diff", "(", "old", ",", "new", ")", ":", "return", "'\\n'", ".", "join", "(", "difflib", ".", "ndiff", "(", "[", "'%s: %s'", "%", "(", "k", ",", "v", ")", "for", "op", "in", "old", "for", "k", ",", "v", "in", "op", ".", "items", ...	34.125	15.625
def toy_data(n_obs): """ Randomly samples from the Dentate Gyrus dataset. Arguments --------- n_obs: `int` Size of the sampled dataset Returns ------- Returns `adata` object """ """Random samples from Dentate Gyrus. """ adata = dentategyrus() indices = np.r...	[ "def", "toy_data", "(", "n_obs", ")", ":", "\"\"\"Random samples from Dentate Gyrus.\n \"\"\"", "adata", "=", "dentategyrus", "(", ")", "indices", "=", "np", ".", "random", ".", "choice", "(", "adata", ".", "n_obs", ",", "n_obs", ")", "adata", "=", "adata",...	21.5	18.136364
def lat_from_inc(inc, a95=None): """ Calculate paleolatitude from inclination using the dipole equation Required Parameter ---------- inc: (paleo)magnetic inclination in degrees Optional Parameter ---------- a95: 95% confidence interval from Fisher mean Returns ---------- ...	[ "def", "lat_from_inc", "(", "inc", ",", "a95", "=", "None", ")", ":", "rad", "=", "old_div", "(", "np", ".", "pi", ",", "180.", ")", "paleo_lat", "=", "old_div", "(", "np", ".", "arctan", "(", "0.5", "", "np", ".", "tan", "(", "inc", "", "rad...	30.074074	19.259259
def propagate(self, year, month=1, day=1, hour=0, minute=0, second=0.0): """Return a position and velocity vector for a given date and time.""" j = jday(year, month, day, hour, minute, second) m = (j - self.jdsatepoch) * minutes_per_day r, v = sgp4(self, m) return r, v	[ "def", "propagate", "(", "self", ",", "year", ",", "month", "=", "1", ",", "day", "=", "1", ",", "hour", "=", "0", ",", "minute", "=", "0", ",", "second", "=", "0.0", ")", ":", "j", "=", "jday", "(", "year", ",", "month", ",", "day", ",", "...	43.428571	18.857143
def registerMachine(self, machineName, adminURL): """ For a server machine to participate in a site, it needs to be registered with the site. The server machine must have ArcGIS Server software installed and authorized. Registering machines this way is a "pull" approa...	[ "def", "registerMachine", "(", "self", ",", "machineName", ",", "adminURL", ")", ":", "params", "=", "{", "\"f\"", ":", "\"json\"", ",", "\"machineName\"", ":", "machineName", ",", "\"adminURL\"", ":", "adminURL", "}", "uURL", "=", "\"%s/register\"", "%", "s...	45.666667	17.148148
def load_files(filenames,multiproc=False,kwargs): """ Load a set of FITS files with kwargs. """ filenames = np.atleast_1d(filenames) logger.debug("Loading %s files..."%len(filenames)) kwargs = [dict(filename=f,kwargs) for f in filenames] if multiproc: from multiprocessing import Pool ...	[ "def", "load_files", "(", "filenames", ",", "multiproc", "=", "False", ",", "", "", "kwargs", ")", ":", "filenames", "=", "np", ".", "atleast_1d", "(", "filenames", ")", "logger", ".", "debug", "(", "\"Loading %s files...\"", "%", "len", "(", "filenames"...	33.458333	15.333333
def get_cache_settings(self, service_id, version_number, name): """Get a specific cache settings object.""" content = self._fetch("/service/%s/version/%d/cache_settings/%s" % (service_id, version_number, name)) return FastlyCacheSettings(self, content)	[ "def", "get_cache_settings", "(", "self", ",", "service_id", ",", "version_number", ",", "name", ")", ":", "content", "=", "self", ".", "_fetch", "(", "\"/service/%s/version/%d/cache_settings/%s\"", "%", "(", "service_id", ",", "version_number", ",", "name", ")", ...	63.75	22.5
def calc_qjoints_v1(self): """Apply the routing equation. Required derived parameters: \|NmbSegments\| \|C1\| \|C2\| \|C3\| Updated state sequence: \|QJoints\| Basic equation: :math:`Q_{space+1,time+1} = c1 \\cdot Q_{space,time+1} + c2 \\cdot Q_{space,time} + ...	[ "def", "calc_qjoints_v1", "(", "self", ")", ":", "der", "=", "self", ".", "parameters", ".", "derived", ".", "fastaccess", "new", "=", "self", ".", "sequences", ".", "states", ".", "fastaccess_new", "old", "=", "self", ".", "sequences", ".", "states", "....	28.821053	16.789474
def name(self): """ Get function name from the labels of the very first block. :return: Function name if there is any, None otherwise :rtype: string """ if self._name is not None: return self._name if not self.blocks: return None ...	[ "def", "name", "(", "self", ")", ":", "if", "self", ".", "_name", "is", "not", "None", ":", "return", "self", ".", "_name", "if", "not", "self", ".", "blocks", ":", "return", "None", "if", "not", "self", ".", "blocks", "[", "0", "]", ".", "instru...	23.72	20.36
def get_reaction(self, reactants, products): """ Gets a reaction from the Materials Project. Args: reactants ([str]): List of formulas products ([str]): List of formulas Returns: rxn """ return self._make_request("/reaction", ...	[ "def", "get_reaction", "(", "self", ",", "reactants", ",", "products", ")", ":", "return", "self", ".", "_make_request", "(", "\"/reaction\"", ",", "payload", "=", "{", "\"reactants[]\"", ":", "reactants", ",", "\"products[]\"", ":", "products", "}", ",", "m...	32.285714	18.714286
def lookup_ids(handles): """ Fetch the twitter ids of each screen_name. """ ids = set() for handle_list in [handles[100 * i:100 * i + 100] for i in range(len(handles))]: if len(handle_list) > 0: while True: r = twapi.request('users/lookup', {'screen_name': ','.join(handle...	[ "def", "lookup_ids", "(", "handles", ")", ":", "ids", "=", "set", "(", ")", "for", "handle_list", "in", "[", "handles", "[", "100", "", "i", ":", "100", "", "i", "+", "100", "]", "for", "i", "in", "range", "(", "len", "(", "handles", ")", ")"...	44.789474	23.631579
def disable_validation(self, field_name): """Disable the validation rules for a field""" field = self.field_dict.get(field_name) if not field: raise exceptions.FieldNotFound('Field not found: \'%s\' when trying to disable validation' % field_name) field.validators =...	[ "def", "disable_validation", "(", "self", ",", "field_name", ")", ":", "field", "=", "self", ".", "field_dict", ".", "get", "(", "field_name", ")", "if", "not", "field", ":", "raise", "exceptions", ".", "FieldNotFound", "(", "'Field not found: \\'%s\\' when tryi...	39.5	23.25
def _set_tunnel_router_interface(self, v, load=False): """ Setter method for tunnel_router_interface, mapped from YANG variable /interface/tunnel/tunnel_router_interface (container) If this variable is read-only (config: false) in the source YANG file, then _set_tunnel_router_interface is considered as ...	[ "def", "_set_tunnel_router_interface", "(", "self", ",", "v", ",", "load", "=", "False", ")", ":", "if", "hasattr", "(", "v", ",", "\"_utype\"", ")", ":", "v", "=", "v", ".", "_utype", "(", "v", ")", "try", ":", "t", "=", "YANGDynClass", "(", "v", ...	86.454545	40.681818
def get(self, request, enterprise_customer_uuid): """ Handle GET request - render "Transmit courses metadata" form. Arguments: request (django.http.request.HttpRequest): Request instance enterprise_customer_uuid (str): Enterprise Customer UUID Returns: ...	[ "def", "get", "(", "self", ",", "request", ",", "enterprise_customer_uuid", ")", ":", "context", "=", "self", ".", "_build_context", "(", "request", ",", "enterprise_customer_uuid", ")", "transmit_courses_metadata_form", "=", "TransmitEnterpriseCoursesForm", "(", ")",...	42.5625	26.9375
def serialize_message(message): """ Serializes an object. It must subclass :class:`FranzEvent`. Parameters ---------- message : FranzEvent The object to be serialized. Returns ------- bytes """ try: return bson.dum...	[ "def", "serialize_message", "(", "message", ")", ":", "try", ":", "return", "bson", ".", "dumps", "(", "message", ".", "serialize", "(", ")", ")", "except", "bson", ".", "UnknownSerializerError", ":", "raise", "SerializationError", "(", "\"Unable to serialize me...	25.684211	18.210526
def getFieldBitRange(self) -> Tuple[int, int]: """ :return: bit range which contains data of this part on interface of field """ offset = self.inFieldOffset return (self.bit_length() + offset, offset)	[ "def", "getFieldBitRange", "(", "self", ")", "->", "Tuple", "[", "int", ",", "int", "]", ":", "offset", "=", "self", ".", "inFieldOffset", "return", "(", "self", ".", "bit_length", "(", ")", "+", "offset", ",", "offset", ")" ]	35.142857	10.571429
def check_path(filename, reporter=modReporter.Default, settings_path=None, **setting_overrides): """Check the given path, printing out any warnings detected.""" try: with open(filename, 'U') as f: codestr = f.read() + '\n' except UnicodeError: reporter.unexpected_error(filename, ...	[ "def", "check_path", "(", "filename", ",", "reporter", "=", "modReporter", ".", "Default", ",", "settings_path", "=", "None", ",", "", "", "setting_overrides", ")", ":", "try", ":", "with", "open", "(", "filename", ",", "'U'", ")", "as", "f", ":", "c...	43	21.076923

def update_publisher_asset(self, upload_stream, publisher_name, asset_type=None, file_name=None, **kwargs): """UpdatePublisherAsset. [Preview API] Update publisher asset like logo. It accepts asset file as an octet stream and file name is passed in header values. :param object upload_stream: Str...

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56.785714

25.321429

def _open_path_window(self): """ Hides this window and opens path window. Passes all needed data and kwargs. """ self.data['top_assistant'] = self.top_assistant self.data['current_main_assistant'] = self.get_current_main_assistant() self.data['kwargs'] = self.kwar...

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39

9.6

def files_stat(self, path, **kwargs): """Returns basic ``stat`` information for an MFS file (including its hash). .. code-block:: python >>> c.files_stat("/test") {'Hash': 'QmUNLLsPACCz1vLxQVkXqqLX5R1X345qqfHbsf67hvA3Nn', 'Size': 0, 'CumulativeSize': 4, 'Ty...

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29.545455

19.636364

def policy_definition_present(name, policy_rule=None, policy_type=None, mode=None, display_name=None, description=None, metadata=None, parameters=None, policy_rule_json=None, policy_rule_file=None, template='jinja', source_hash=None, source_hash_name=None, ski...

[ "def", "policy_definition_present", "(", "name", ",", "policy_rule", "=", "None", ",", "policy_type", "=", "None", ",", "mode", "=", "None", ",", "display_name", "=", "None", ",", "description", "=", "None", ",", "metadata", "=", "None", ",", "parameters", ...

39.621723

27.441948

def remove(self, observableElement): """ remove an obsrvable element :param str observableElement: the name of the observable element """ if observableElement in self._observables: self._observables.remove(observableElement)

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33.75

13.25

def _comparator_lt(filter_value, tested_value): """ Tests if the filter value is strictly greater than the tested value tested_value < filter_value """ if is_string(filter_value): value_type = type(tested_value) try: # Try a conversion filter_value = value_ty...

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29.821429

13.535714

def expKEGG(organism,names_KEGGids): """ Gets all KEGG pathways for an organism :param organism: an organism as listed in organismsKEGG() :param names_KEGGids: a Pandas dataframe with the columns 'gene_name': and 'KEGGid' as reported from idsKEGG(organism) (or a subset of it). :returns df: a Pand...

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39.942308

17.711538

def from_data(cls, data): """Create gyroscope stream from data array Parameters ------------------- data : (N, 3) ndarray Data array of angular velocities (rad/s) Returns ------------------- GyroStream Stream object """ if...

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25

18.315789

def _tryMatch(self, textToMatchObject): """Try to find themselves in the text. Returns (count, matchedRule) or (None, None) if doesn't match """ # andreikop: This check is not described in kate docs, and I haven't found it in the code if not textToMatchObject.isWordStart: ...

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47.653846

25.846154

def _get_sector(self, channel, nlines, ncols): """Determine which sector was scanned""" if self._is_vis(channel): margin = 100 sectors_ref = self.vis_sectors else: margin = 50 sectors_ref = self.ir_sectors for (nlines_ref, ncols_ref), sect...

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33.933333

15.933333

def unregister(self, document): """ Unregisters an existing document, so that this document is no longer available. This function is mainly used during plugin deactivation. :param document: Name of the document """ if document not in self.documents.keys(): s...

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38.230769

20.538462

def rlm(data, xseq, **params): """ Fit RLM """ X = sm.add_constant(data['x']) Xseq = sm.add_constant(xseq) init_kwargs, fit_kwargs = separate_method_kwargs( params['method_args'], sm.RLM, sm.RLM.fit) model = sm.RLM(data['y'], X, **init_kwargs) results = model.fit(**fit_kwargs) ...

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27.2

17.3

def plugins(): '''Display some details about the local plugins''' plugins = current_app.config['PLUGINS'] for name, description in entrypoints.ENTRYPOINTS.items(): echo('{0} ({1})'.format(white(description), name)) if name == 'udata.themes': actives = [current_app.config['THEME']...

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44.538462

15.769231

def get_server_id(): ''' Provides an integer based on the FQDN of a machine. Useful as server-id in MySQL replication or anywhere else you'll need an ID like this. ''' # Provides: # server_id if salt.utils.platform.is_proxy(): server_id = {} else: use_crc = __opts_...

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37.541667

26.958333

def handle(self, *args, **options): """ Alter the tables """ from categories.migration import drop_field if 'app_name' not in options or 'model_name' not in options or 'field_name' not in options: raise CommandError("You must specify an Application name, a Model name ...

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46.333333

26.333333

def run_mutect(job, tumor_bam, normal_bam, univ_options, mutect_options): """ Spawn a MuTect job for each chromosome on the DNA bams. :param dict tumor_bam: Dict of bam and bai for tumor DNA-Seq :param dict normal_bam: Dict of bam and bai for normal DNA-Seq :param dict univ_options: Dict of univers...

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47.529412

22.764706

def get_member_calendar(self, max_results=0): ''' a method to retrieve the upcoming events for all groups member belongs to :param max_results: [optional] integer with number of events to include :return: dictionary with list of event details inside [json] key event_details = s...

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34

24.444444

def _uploadStream(self, fileName, update=False, encrypt=True): """ Yields a context manager that can be used to write to the bucket with a stream. See :class:`~toil.jobStores.utils.WritablePipe` for an example. Will throw assertion error if the file shouldn't be updated and yet ...

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39.444444

19.666667

def Rforce(self,R,z,phi=0.,t=0.,v=None): """ NAME: Rforce PURPOSE: evaluate cylindrical radial force F_R (R,z) INPUT: R - Cylindrical Galactocentric radius (can be Quantity) z - vertical height (can be Quantity) phi - azimuth...

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19

25.875

def create(vm_): r''' Create a single VM from a data dict. vm\_ The dictionary use to create a VM. Optional vm\_ dict options for overwriting template: region_id Optional - OpenNebula Zone ID memory Optional - In MB cpu Optional - Percent of host CPU to a...

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32.735849

21.801887

def session(self): """Provide access to request session with local cache enabled.""" if self._session is None: self._session = cachecontrol.CacheControl( requests.Session(), cache=caches.FileCache('.tvdb_cache')) return self._session

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42.142857

10.571429

def blend_mode(self): """BlendMode: The blend mode used for drawing operations.""" blend_mode_ptr = ffi.new('int *') check_int_err(lib.SDL_GetRenderDrawBlendMode(self._ptr, blend_mode_ptr)) return BlendMode(blend_mode_ptr[0])

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50.6

12.6

def set_motor_position(self, motor_name, position): """ Sets the motor target position. """ self.call_remote_api('simxSetJointTargetPosition', self.get_object_handle(motor_name), position, sending=True)

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50

9.5

def b(self, number): """A parameter to tune the amount of field length normalisation that is applied when calculating relevance scores. A value of 0 will completely disable any normalisation and a value of 1 will fully normalise field lengths. The default is 0.75. Values of b wi...

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35.071429

18.214286

def settings(request=None): """ Add the settings object to the template context. """ from yacms.conf import settings allowed_settings = settings.TEMPLATE_ACCESSIBLE_SETTINGS template_settings = TemplateSettings(settings, allowed_settings) template_settings.update(DEPRECATED) # This is...

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38.5

21.6

def create_profiles(self, prefix, weeks, ip_user=False): """Create the user profiles for the given weeks.""" # Future: Add a time range in weeks for how long a user is considered # as the same user. # Count accessed records record_counter = {} for year, week in w...

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37.32

18.4

def offload_expired_service_cargo(self, service): """Remove docker images for a specific service. This method will call itself recursively for dependents and dependencies. :param service: :return None: """ # TODO: move offload cargo logic to this method self._s...

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41

16.666667

def create(message_type, priority=0): """Create a ProtocolMessage.""" message = protobuf.ProtocolMessage() message.type = message_type message.priority = priority return message

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32

7.166667

def render_head(self, ctx, data): """ This renderer calculates content for the <head> tag by concatenating the values from L{getHeadContent} and the overridden L{head} method. """ req = inevow.IRequest(ctx) more = getattr(self.fragment, 'head', None) if more is no...

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39.307692

14.230769

def is_bytes(string): """Check if a string is a bytes instance :param Union[str, bytes] string: A string that may be string or bytes like :return: Whether the provided string is a bytes type or not :rtype: bool """ if six.PY3 and isinstance(string, (bytes, memoryview, bytearray)): # noqa ...

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35.833333

23.083333

def K(self, parm): """ Returns the Gram Matrix Parameters ---------- parm : np.ndarray Parameters for the Gram Matrix Returns ---------- - Gram Matrix (np.ndarray) """ return ARD_K_matrix(self.X, parm) + np.identity(self.X.shape[0])*(...

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24.307692

19.846154

def parse(self, rrstr): # type: (bytes) -> None ''' Parse a Rock Ridge Time Stamp record out of a string. Parameters: rrstr - The string to parse the record out of. Returns: Nothing. ''' if self._initialized: raise pycdlibexception.P...

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35.142857

25.485714

def find_nested_meta_first(d, prop_name, version): """Returns obj. for badgerfish and val for hbf. Appropriate for nested literals""" if _is_badgerfish_version(version): return find_nested_meta_first_bf(d, prop_name) p = '^' + prop_name return d.get(p)

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45.166667

10.5

def fromFile(path_or_buffer): """Creates abstraction using path to file :param str path_or_buffer: path to tex file or buffer :return: TreeOfContents object """ return TOC.fromLatex(open(path_or_buffer).read() if isinstance(path_or_buffer, str) ...

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39.666667

13.666667

def _get_function_type(self, function_name): """ Returns the function object that matches the provided name. Only Fn:: and Ref functions are supported here so that other functions specific to troposphere are skipped. """ if (function_name.startswith("Fn::") and ...

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47.363636

15.181818

def rewind(self, count): """Rewind index.""" if count > self._index: # pragma: no cover raise ValueError("Can't rewind past beginning!") self._index -= count

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27.142857

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def domain_sites(): """ Get a list of domains Each domain is an attribute dict with name, site_id and settings """ if not hasattr(env,'domains'): sites = _get_django_sites() site_ids = sites.keys() site_ids.sort() domains = [] for id in site_ids...

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29.771429

17.771429

def do_json_set_many(self, params): """ \x1b[1mNAME\x1b[0m json_set_many - like `json_set`, but for multiple key/value pairs \x1b[1mSYNOPSIS\x1b[0m json_set_many <path> <keys> <value> <value_type> <keys1> <value1> <value_type1> ... \x1b[1mDESCRIPTION\x1b[0m If the key exists and the va...

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34.191176

23.691176

def load_transcript_fpkm_dict_from_gtf( gtf_path, transcript_id_column_name="reference_id", fpkm_column_name="FPKM", feature_column_name="feature"): """ Load a GTF file generated by StringTie which contains transcript-level quantification of abundance. Returns a dictionary ma...

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39.25

16.375

def visible(self, status): """Turn the display on/off (quickly)""" self._display_control = ByteUtil.apply_flag(self._display_control, Command.DISPLAY_ON, status) self.command(self._display_control)

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54.5

19.75

def qubit_adjacent_lifted_gate(i, matrix, n_qubits): """ Lifts input k-qubit gate on adjacent qubits starting from qubit i to complete Hilbert space of dimension 2 ** num_qubits. Ex: 1-qubit gate, lifts from qubit i Ex: 2-qubit gate, lifts from qubits (i+1, i) Ex: 3-qubit gate, lifts from qubit...

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45.044444

24.6

def parse_characters(self, character_page): """Parses the DOM and returns media character attributes in the sidebar. :type character_page: :class:`bs4.BeautifulSoup` :param character_page: MAL character page's DOM :rtype: dict :return: character attributes. """ media_info = self.parse_sid...

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39.114286

20.571429

def describe_version(self): """ Query the Cassandra server for the version. :returns: string -- the version tag """ def _vers(client): return client.describe_version() d = self._connection() d.addCallback(_vers) return d

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23.916667

14.25

def observed_data_to_xarray(self): """Convert observed data to xarray.""" posterior_model = self.posterior_model if self.dims is None: dims = {} else: dims = self.dims observed_names = self.observed_data if isinstance(observed_names, str): ...

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43.736842

14.526316

def add_permission_role(self, role, perm_view): """ Add permission-ViewMenu object to Role :param role: The role object :param perm_view: The PermissionViewMenu object """ if perm_view not in role.permissions: try: ...

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35.85

13.15

def emit(self, action, event): """ Send an event to all the client listening for notifications :param action: Action name :param event: Event to send """ NotificationManager.instance().emit(action, event, project_id=self.id)

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33.25

15.75

def remove_duplicate_faces(self): """ On the current mesh remove any faces which are duplicates. Alters ---------- self.faces : removes duplicates """ unique, inverse = grouping.unique_rows(np.sort(self.faces, axis=1)) self.update_faces(unique)

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30

16.4

def create_event(options, config, credentials): """ Create event in calendar with sms reminder. """ try: http = credentials.authorize(httplib2.Http()) service = build("calendar", "v3", http=http) event = { "summary": options.message, "location": "", ...

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31.517241

19.931034

def get_grade_systems(self): """Gets all ``GradeSystems``. In plenary mode, the returned list contains all known grade systems or an error results. Otherwise, the returned list may contain only those grade systems that are accessible through this session. return: (osid....

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48.318182

23.590909

def is_primitive(var): """ Checks if an object is in ( float, long, str, int, dict, list, unicode, tuple, set, frozenset, datetime.datetime, datetime.timedelta ) """ primitives = ( float, long, str, int, dict, list, unicode, tuple, set, frozenset, datetime.datetime, datetime.timedelta, type(None) ) ...

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41.8

30.6

def modify_image_attribute(self, image_id, attribute='launchPermission', operation='add', user_ids=None, groups=None, product_codes=None): """ Changes an attribute of an image. :type image_id: string :param image_id: The imag...

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40.567568

21.540541

def evaluate(args, embedding, vocab, global_step, eval_analogy=False): """Evaluation helper""" if 'eval_tokens' not in globals(): global eval_tokens eval_tokens_set = evaluation.get_tokens_in_evaluation_datasets(args) if not args.no_eval_analogy: eval_tokens_set.update(vocab...

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36.416667

21.055556

def to_1000(portal_setup): """Initial version to 1000 :param portal_setup: The portal_setup tool """ logger.info("Run all import steps from SENAITE LIMS ...") context = portal_setup._getImportContext(PROFILE_ID) portal = context.getSite() setup_html_filter(portal) portal_setup.runAllIm...

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33.833333

16.583333

def get_value(self, variant_line=None, variant_dict=None, entry=None, raw_entry=None, vcf_header=None, csq_format=None, dict_key=None, individual_id=None): """ Return the value as specified by plugin Get value will return one value or None if no correct value is found....

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39.531746

14.674603

def parse(self, text): """Parse the given text, return a list of Keywords.""" token_stream = self.lexer.tokenize(text) return self.expr(token_stream, next(token_stream))

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47.5

11

def derivatives_factory(cls, coef, domain, kind, **kwargs): """ Given some coefficients, return a the derivative of a certain kind of orthogonal polynomial defined over a specific domain. """ basis_polynomial = cls._basis_polynomial_factory(kind) return basis_polynomial(...

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41.75

19

def export_xhtml(html, filename, image_tag=None): """ Export the contents of the ConsoleWidget as XHTML with inline SVGs. Parameters: ----------- html : str, A utf-8 encoded Python string containing the Qt HTML to export. filename : str The file to be saved. image_tag : callab...

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33.433333

20.9

def loads(*strings, missing=Missing.silent): """ Read a `.Configuration` instance from strings. :param strings: configuration contents :param missing: policy to be used when a configured key is missing, either as a `.Missing` instance or a default value :return: a `.Configuration` instance ...

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42.636364

18.090909

def prepareToCalcEndOfPrdvP(self): ''' Prepare to calculate end-of-period marginal value by creating an array of market resources that the agent could have next period, considering the grid of end-of-period assets and the distribution of shocks he might experience next period. T...

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50.590164

31.213115

def hugoniot_rho_single(p, rho0, c0, s, min_strain=0.01): """ calculate density in g/cm^3 from a hugoniot curve :param p: pressure in GPa :param rho0: density at 1 bar in g/cm^3 :param c0: velocity at 1 bar in km/s :param s: slope of the velocity change :param min_strain: defining minimum v...

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30.333333

15.111111

def handle_signature(self, sig, signode): """Parse the signature *sig* into individual nodes and append them to the *signode*. If ValueError is raises, parsing is aborted and the whole *sig* string is put into a single desc_name node. The return value is the value that identifies the ob...

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42.835294

21.023529

def format_key_for_backend(self, key, remove_slash_prefix=False, trailing_slash=False): """Add a possible prefix to the key before sending it to the backend""" path = self.prefix + key if trailing_slash: if not path or path[-1] != "/": path += "/" else: ...

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45.454545

18.818182

def time(self, target=None): """ Get server time. Optional arguments: * target=None - Target server. """ with self.lock: if target: self.send('TIME %s' % target) else: self.send('TIME') time = '' ...

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29.375

12.125

def device_event_list(self, **kwargs): # noqa: E501 """List all device events. # noqa: E501 List all device events for an account. # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass asynchronous=True >>> thr...

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161.2

133.96

def popone(self, key, default=_marker): """Remove specified key and return the corresponding value. If key is not found, d is returned if given, otherwise KeyError is raised. """ identity = self._title(key) for i in range(len(self._impl._items)): if self._im...

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33.055556

12.166667

def start(self): """Start the firewall.""" self.clear() self.setDefaultPolicy() self.acceptIcmp() self.acceptInput('lo')

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25.833333

13

def on_epoch_end(self, epoch_info): """ Update data in visdom on push """ metrics_df = pd.DataFrame([epoch_info.result]).set_index('epoch_idx') visdom_append_metrics( self.vis, metrics_df, first_epoch=epoch_info.global_epoch_idx == 1 )

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32.888889

19.444444

def add_sim_errors(self, qname, sname, value, sym=True): """Add a similarity error value to self.similarity_errors.""" self.similarity_errors.loc[qname, sname] = value if sym: self.similarity_errors.loc[sname, qname] = value

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51.2

15.4

def handle_nick(self, params): """ Handle the initial setting of the user's nickname and nick changes. """ nick = params # Valid nickname? if re.search(r'[^a-zA-Z0-9\-\[\]\'`^{}_]', nick): raise IRCError.from_name('erroneusnickname', ':%s' % nick) if...

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35.73913

18.391304

def render_state(self, sls, saltenv, mods, matches, local=False): ''' Render a state file and retrieve all of the include states ''' errors = [] if not local: state_data = self.client.get_state(sls, saltenv) fn_ = state_data.get('dest', False) else...

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46.603261

19.36413

def send(self, payload): """ Send a payload to exchange to containing command and payload to the queue specified in config. :param command: str: name of the command we want run by WorkQueueProcessor :param payload: str: string data that will be put into the exchange's message body ...

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55.8

28.6

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57.6

23.1

def run_supernova(ctx, executable, debug, quiet, environment, command, conf, echo, dashboard): """ You can use supernova with many OpenStack clients and avoid the pain of managing multiple sets of environment variables. Getting started is easy and there's some documentation that can h...

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39.401639

23.270492

def normalize_values_queryset(values_queryset, model=None, app=None, verbosity=1): '''Shoehorn the values from one database table into another * Remove padding (leading/trailing spaces) from `CharField` and `TextField` values * Truncate all `CharField`s to the max_length of the destination `model` * Su...

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47.634146

24.02439

def start(self, message): """ Manually starts timer with the message. :param message: The display message. """ self._start = time.clock() VSGLogger.info("{0:<20} - Started".format(message))

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29

11.5

def _get_tz(tz): """ for a tz-aware type, return an encoded zone """ zone = timezones.get_timezone(tz) if zone is None: zone = tz.utcoffset().total_seconds() return zone

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31.333333

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def enable(self, cmd="sudo su", pattern="ssword", re_flags=re.IGNORECASE): """Attempt to become root.""" delay_factor = self.select_delay_factor(delay_factor=0) output = "" if not self.check_enable_mode(): self.write_channel(self.normalize_cmd(cmd)) time.sleep(0.3...

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def _get_config(self, unit, filename): """Get a ConfigParser object for parsing a unit's config file.""" file_contents = unit.file_contents(filename) # NOTE(beisner): by default, ConfigParser does not handle options # with no value, such as the flags used in the mysql my.cnf file. ...

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def cli(env, **args): """Allows for creating a virtual guest in a reserved capacity.""" create_args = _parse_create_args(env.client, args) create_args['primary_disk'] = args.get('primary_disk') manager = CapacityManager(env.client) capacity_id = args.get('capacity_id') test = args.get('test') ...

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34.833333

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def _deferGenerator(g, deferred=None): """ See L{waitForDeferred}. """ result = None while 1: if deferred is None: deferred = defer.Deferred() try: result = g.next() except StopIteration: deferred.callback(result) return deferre...

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def flatten_links(td, _recurse=False): """Flattens relative URLs within text of a table cell to IDs and returns the result. :td: the PyQuery object for the HTML to convert :returns: the string with the links flattened to IDs """ # helper function to flatten individual strings/links def _fl...

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def load_churn(): """Load and return the churn dataset (classification). The bank marketing is a easily transformable example-dependent cost-sensitive classification dataset. Returns ------- data : Bunch Dictionary-like object, the interesting attributes are: 'data', the data to le...

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def Space(self, n = 1, dl = 0): """空格键n次 """ self.Delay(dl) self.keyboard.tap_key(" ", n)

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23.4

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def record_diff(old, new): """ Generate a human-readable diff of two performance records. """ return '\n'.join(difflib.ndiff( ['%s: %s' % (k, v) for op in old for k, v in op.items()], ['%s: %s' % (k, v) for op in new for k, v in op.items()], ))

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34.125

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def toy_data(n_obs): """ Randomly samples from the Dentate Gyrus dataset. Arguments --------- n_obs: `int` Size of the sampled dataset Returns ------- Returns `adata` object """ """Random samples from Dentate Gyrus. """ adata = dentategyrus() indices = np.r...

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21.5

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def lat_from_inc(inc, a95=None): """ Calculate paleolatitude from inclination using the dipole equation Required Parameter ---------- inc: (paleo)magnetic inclination in degrees Optional Parameter ---------- a95: 95% confidence interval from Fisher mean Returns ---------- ...

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def propagate(self, year, month=1, day=1, hour=0, minute=0, second=0.0): """Return a position and velocity vector for a given date and time.""" j = jday(year, month, day, hour, minute, second) m = (j - self.jdsatepoch) * minutes_per_day r, v = sgp4(self, m) return r, v

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43.428571

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def registerMachine(self, machineName, adminURL): """ For a server machine to participate in a site, it needs to be registered with the site. The server machine must have ArcGIS Server software installed and authorized. Registering machines this way is a "pull" approa...

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45.666667

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def load_files(filenames,multiproc=False,**kwargs): """ Load a set of FITS files with kwargs. """ filenames = np.atleast_1d(filenames) logger.debug("Loading %s files..."%len(filenames)) kwargs = [dict(filename=f,**kwargs) for f in filenames] if multiproc: from multiprocessing import Pool ...

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33.458333

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def get_cache_settings(self, service_id, version_number, name): """Get a specific cache settings object.""" content = self._fetch("/service/%s/version/%d/cache_settings/%s" % (service_id, version_number, name)) return FastlyCacheSettings(self, content)

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63.75

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def calc_qjoints_v1(self): """Apply the routing equation. Required derived parameters: |NmbSegments| |C1| |C2| |C3| Updated state sequence: |QJoints| Basic equation: :math:`Q_{space+1,time+1} = c1 \\cdot Q_{space,time+1} + c2 \\cdot Q_{space,time} + ...

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28.821053

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def name(self): """ Get function name from the labels of the very first block. :return: Function name if there is any, None otherwise :rtype: string """ if self._name is not None: return self._name if not self.blocks: return None ...

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23.72

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def get_reaction(self, reactants, products): """ Gets a reaction from the Materials Project. Args: reactants ([str]): List of formulas products ([str]): List of formulas Returns: rxn """ return self._make_request("/reaction", ...

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32.285714

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def lookup_ids(handles): """ Fetch the twitter ids of each screen_name. """ ids = set() for handle_list in [handles[100 * i:100 * i + 100] for i in range(len(handles))]: if len(handle_list) > 0: while True: r = twapi.request('users/lookup', {'screen_name': ','.join(handle...

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44.789474

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def disable_validation(self, field_name): """Disable the validation rules for a field""" field = self.field_dict.get(field_name) if not field: raise exceptions.FieldNotFound('Field not found: \'%s\' when trying to disable validation' % field_name) field.validators =...

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39.5

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def _set_tunnel_router_interface(self, v, load=False): """ Setter method for tunnel_router_interface, mapped from YANG variable /interface/tunnel/tunnel_router_interface (container) If this variable is read-only (config: false) in the source YANG file, then _set_tunnel_router_interface is considered as ...

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86.454545

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def get(self, request, enterprise_customer_uuid): """ Handle GET request - render "Transmit courses metadata" form. Arguments: request (django.http.request.HttpRequest): Request instance enterprise_customer_uuid (str): Enterprise Customer UUID Returns: ...

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42.5625

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def serialize_message(message): """ Serializes an object. It must subclass :class:`FranzEvent`. Parameters ---------- message : FranzEvent The object to be serialized. Returns ------- bytes """ try: return bson.dum...

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25.684211

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def getFieldBitRange(self) -> Tuple[int, int]: """ :return: bit range which contains data of this part on interface of field """ offset = self.inFieldOffset return (self.bit_length() + offset, offset)

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35.142857

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def check_path(filename, reporter=modReporter.Default, settings_path=None, **setting_overrides): """Check the given path, printing out any warnings detected.""" try: with open(filename, 'U') as f: codestr = f.read() + '\n' except UnicodeError: reporter.unexpected_error(filename, ...

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43

21.076923