kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def select_down(self): """move cursor down""" r, c = self._index self._select_index(r+1, c)	[ "def", "select_down", "(", "self", ")", ":", "r", ",", "c", "=", "self", ".", "_index", "self", ".", "_select_index", "(", "r", "+", "1", ",", "c", ")" ]	28	9.5
def create(self, language, query, tasks=values.unset, model_build=values.unset, field=values.unset): """ Create a new QueryInstance :param unicode language: An ISO language-country string of the sample. :param unicode query: A user-provided string that uniquely identifies...	[ "def", "create", "(", "self", ",", "language", ",", "query", ",", "tasks", "=", "values", ".", "unset", ",", "model_build", "=", "values", ".", "unset", ",", "field", "=", "values", ".", "unset", ")", ":", "data", "=", "values", ".", "of", "(", "{"...	49.655172	35.931034
def get_frames(self): "Define an iterator that will return frames at the given blocksize" nb_frames = self.input_totalframes // self.output_blocksize if self.input_totalframes % self.output_blocksize == 0: nb_frames -= 1 # Last frame must send eod=True for index in xrange(...	[ "def", "get_frames", "(", "self", ")", ":", "nb_frames", "=", "self", ".", "input_totalframes", "//", "self", ".", "output_blocksize", "if", "self", ".", "input_totalframes", "%", "self", ".", "output_blocksize", "==", "0", ":", "nb_frames", "-=", "1", "# La...	44.153846	27.076923
def stop(self): """ Stop the reader """ # print('stopping NonBlockingStreamReader..') # print('acquire..') NonBlockingStreamReader._stream_mtx.acquire() # print('acquire..ok') NonBlockingStreamReader._streams.remove(self._descriptor) if not NonBloc...	[ "def", "stop", "(", "self", ")", ":", "# print('stopping NonBlockingStreamReader..')", "# print('acquire..')", "NonBlockingStreamReader", ".", "_stream_mtx", ".", "acquire", "(", ")", "# print('acquire..ok')", "NonBlockingStreamReader", ".", "_streams", ".", "remove", "(", ...	37.5	11
def do_speak(self, args): """Repeats what you tell me to.""" words = [] for word in args.words: if args.piglatin: word = '%s%say' % (word[1:], word[0]) if args.shout: word = word.upper() words.append(word) repetitions =...	[ "def", "do_speak", "(", "self", ",", "args", ")", ":", "words", "=", "[", "]", "for", "word", "in", "args", ".", "words", ":", "if", "args", ".", "piglatin", ":", "word", "=", "'%s%say'", "%", "(", "word", "[", "1", ":", "]", ",", "word", "[", ...	32.5	16.863636
def network_expansion(network, method = 'rel', ext_min=0.1, ext_width=False, filename=None, boundaries=[]): """Plot relative or absolute network extension of AC- and DC-lines. Parameters ---------- network: PyPSA network container Holds topology of grid including resul...	[ "def", "network_expansion", "(", "network", ",", "method", "=", "'rel'", ",", "ext_min", "=", "0.1", ",", "ext_width", "=", "False", ",", "filename", "=", "None", ",", "boundaries", "=", "[", "]", ")", ":", "cmap", "=", "plt", ".", "cm", ".", "jet", ...	38.780303	21.25
def get_subarray_sbi_ids(sub_array_id): """Return list of scheduling block Id's associated with the given sub_array_id """ ids = [] for key in sorted(DB.keys(pattern='scheduling_block/*')): config = json.loads(DB.get(key)) if config['sub_array_id'] == sub_array_id: ids.ap...	[ "def", "get_subarray_sbi_ids", "(", "sub_array_id", ")", ":", "ids", "=", "[", "]", "for", "key", "in", "sorted", "(", "DB", ".", "keys", "(", "pattern", "=", "'scheduling_block/*'", ")", ")", ":", "config", "=", "json", ".", "loads", "(", "DB", ".", ...	34.4	11.4
def get_time(filename): """ Get the modified time for a file as a datetime instance """ ts = os.stat(filename).st_mtime return datetime.datetime.utcfromtimestamp(ts)	[ "def", "get_time", "(", "filename", ")", ":", "ts", "=", "os", ".", "stat", "(", "filename", ")", ".", "st_mtime", "return", "datetime", ".", "datetime", ".", "utcfromtimestamp", "(", "ts", ")" ]	28.333333	7.666667
def get_vmware_inventory_path(): """ Returns VMware inventory file path. :returns: path to the inventory file """ if sys.platform.startswith("win"): return os.path.expandvars(r"%APPDATA%\Vmware\Inventory.vmls") elif sys.platform.startswith("darwin"): ...	[ "def", "get_vmware_inventory_path", "(", ")", ":", "if", "sys", ".", "platform", ".", "startswith", "(", "\"win\"", ")", ":", "return", "os", ".", "path", ".", "expandvars", "(", "r\"%APPDATA%\\Vmware\\Inventory.vmls\"", ")", "elif", "sys", ".", "platform", "....	36.692308	18.846154
def fit(self, data, debug=False): """ Fit each segment. Segments that have not already been explicitly added will be automatically added with default model and ytransform. Parameters ---------- data : pandas.DataFrame Must have a column with the same name as ...	[ "def", "fit", "(", "self", ",", "data", ",", "debug", "=", "False", ")", ":", "data", "=", "util", ".", "apply_filter_query", "(", "data", ",", "self", ".", "fit_filters", ")", "unique", "=", "data", "[", "self", ".", "segmentation_col", "]", ".", "u...	37.125	22.525
def _get_dbal_column_type(self, type_): """ Get the dbal column type. :param type_: The fluent type :type type_: str :rtype: str """ type_ = type_.lower() if type_ == "enum": return "string" return super(PostgresSchemaGrammar, self)...	[ "def", "_get_dbal_column_type", "(", "self", ",", "type_", ")", ":", "type_", "=", "type_", ".", "lower", "(", ")", "if", "type_", "==", "\"enum\"", ":", "return", "\"string\"", "return", "super", "(", "PostgresSchemaGrammar", ",", "self", ")", ".", "_get_...	22.333333	18.866667
def plot_brillouin_zone(bz_lattice, lines=None, labels=None, kpoints=None, fold=False, coords_are_cartesian=False, ax=None, **kwargs): """ Plots a 3D representation of the Brillouin zone of the structure. Can add to the plot paths, labels and kpoints Args...	[ "def", "plot_brillouin_zone", "(", "bz_lattice", ",", "lines", "=", "None", ",", "labels", "=", "None", ",", "kpoints", "=", "None", ",", "fold", "=", "False", ",", "coords_are_cartesian", "=", "False", ",", "ax", "=", "None", ",", "", "", "kwargs", ...	36.84	21
def file_path(self, request, response=None, info=None): """ 抓取到的资源存放到七牛的时候, 应该采用什么样的key? 返回的path是一个JSON字符串, 其中有bucket和key的信息 """ return json.dumps(self._extract_key_info(request))	[ "def", "file_path", "(", "self", ",", "request", ",", "response", "=", "None", ",", "info", "=", "None", ")", ":", "return", "json", ".", "dumps", "(", "self", ".", "_extract_key_info", "(", "request", ")", ")" ]	41.4	13
def qvalues(pv, m = None, verbose = False, lowmem = False, pi0 = None): """ Copyright (c) 2012, Nicolo Fusi, University of Sheffield All rights reserved. Estimates q-values from p-values Args ===== m: number of tests. If not specified m = pv.size verbose: print verbose messages? (defa...	[ "def", "qvalues", "(", "pv", ",", "m", "=", "None", ",", "verbose", "=", "False", ",", "lowmem", "=", "False", ",", "pi0", "=", "None", ")", ":", "assert", "(", "pv", ".", "min", "(", ")", ">=", "0", "and", "pv", ".", "max", "(", ")", "<=", ...	27.642857	21.561224
def phi(v): """Neutrino direction in polar coordinates. ``phi``, ``theta`` is the opposite of ``zenith``, ``azimuth``. Angles in radians. """ v = np.atleast_2d(v) dir_x = v[:, 0] dir_y = v[:, 1] return phi_separg(dir_x, dir_y)	[ "def", "phi", "(", "v", ")", ":", "v", "=", "np", ".", "atleast_2d", "(", "v", ")", "dir_x", "=", "v", "[", ":", ",", "0", "]", "dir_y", "=", "v", "[", ":", ",", "1", "]", "return", "phi_separg", "(", "dir_x", ",", "dir_y", ")" ]	22.727273	19.636364
def _write_str(self, data): """ Converts the given data then writes it :param data: Data to be written :return: The result of ``self.output.write()`` """ with self.__lock: self.output.write( to_str(data, self.encoding) .encode(...	[ "def", "_write_str", "(", "self", ",", "data", ")", ":", "with", "self", ".", "__lock", ":", "self", ".", "output", ".", "write", "(", "to_str", "(", "data", ",", "self", ".", "encoding", ")", ".", "encode", "(", ")", ".", "decode", "(", "self", ...	29.538462	12.615385
def assign_site_properties(self, slab, height=0.9): """ Assigns site properties. """ if 'surface_properties' in slab.site_properties.keys(): return slab else: surf_sites = self.find_surface_sites_by_height(slab, height) surf_props = ['surface' if s...	[ "def", "assign_site_properties", "(", "self", ",", "slab", ",", "height", "=", "0.9", ")", ":", "if", "'surface_properties'", "in", "slab", ".", "site_properties", ".", "keys", "(", ")", ":", "return", "slab", "else", ":", "surf_sites", "=", "self", ".", ...	40	16
def findElementsWithId(node, elems=None): """ Returns all elements with id attributes """ if elems is None: elems = {} id = node.getAttribute('id') if id != '': elems[id] = node if node.hasChildNodes(): for child in node.childNodes: # from http://www.w3.or...	[ "def", "findElementsWithId", "(", "node", ",", "elems", "=", "None", ")", ":", "if", "elems", "is", "None", ":", "elems", "=", "{", "}", "id", "=", "node", ".", "getAttribute", "(", "'id'", ")", "if", "id", "!=", "''", ":", "elems", "[", "id", "]...	33.625	13.75
def quic_graph_lasso_cv(X, metric): """Run QuicGraphicalLassoCV on data with metric of choice. Compare results with GridSearchCV + quic_graph_lasso. The number of lambdas tested should be much lower with similar final lam_ selected. """ print("QuicGraphicalLassoCV with:") print(" metric: {}"...	[ "def", "quic_graph_lasso_cv", "(", "X", ",", "metric", ")", ":", "print", "(", "\"QuicGraphicalLassoCV with:\"", ")", "print", "(", "\" metric: {}\"", ".", "format", "(", "metric", ")", ")", "model", "=", "QuicGraphicalLassoCV", "(", "cv", "=", "2", ",", "...	37.35	15.6
def route(route_str): # decorator param """ Provides play2 likes routes, with python formatter All string fileds should be named parameters :param route_str: a route "GET /parent/{parentID}/child/{childId}{ctype}" :return: the response of requests.request """ def ilog(elapsed): # s...	[ "def", "route", "(", "route_str", ")", ":", "# decorator param", "def", "ilog", "(", "elapsed", ")", ":", "# statistic", "last_stat", "=", "_routes_stat", ".", "get", "(", "route_str", ",", "{", "\"count\"", ":", "0", ",", "\"min\"", ":", "sys", ".", "ma...	45.049505	24.673267
def parse(self, line, **options): """\ Parse a line and return (cmd, args, kwargs) - cmd may be False if it wasn't parseable. Relatively simple in the Regex parser - anything can be "parsed", but is not guaranteed to match. """ line = line.strip() if not ...	[ "def", "parse", "(", "self", ",", "line", ",", "", "", "options", ")", ":", "line", "=", "line", ".", "strip", "(", ")", "if", "not", "line", ":", "return", "(", "False", ",", "(", ")", ",", "{", "}", ")", "split", "=", "line", ".", "split"...	31.928571	13
def histogram(a, bins=10, range=None, **kwargs): """Compute the histogram of the input data. Parameters ---------- a : NDArray Input data. The histogram is computed over the flattened array. bins : int or sequence of scalars If bins is an int, it defines the number of equal-width bi...	[ "def", "histogram", "(", "a", ",", "bins", "=", "10", ",", "range", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "isinstance", "(", "bins", ",", "Symbol", ")", ":", "return", "_internal", ".", "_histogram", "(", "data", "=", "a", ",", "b...	46.413793	26.551724
def publish(idx=None): """Publish packaged distributions to pypi index""" if idx is None: idx = '' else: idx = '-r ' + idx run('python setup.py register {}'.format(idx)) run('twine upload {} dist/.whl dist/.egg dist/*.tar.gz'.format(idx))	[ "def", "publish", "(", "idx", "=", "None", ")", ":", "if", "idx", "is", "None", ":", "idx", "=", "''", "else", ":", "idx", "=", "'-r '", "+", "idx", "run", "(", "'python setup.py register {}'", ".", "format", "(", "idx", ")", ")", "run", "(", "'twi...	33.625	19.125
def cli(): """Parse options from the command line""" parser = argparse.ArgumentParser(prog="sphinx-serve", formatter_class=argparse.ArgumentDefaultsHelpFormatter, conflict_handler="resolve", descriptio...	[ "def", "cli", "(", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "prog", "=", "\"sphinx-serve\"", ",", "formatter_class", "=", "argparse", ".", "ArgumentDefaultsHelpFormatter", ",", "conflict_handler", "=", "\"resolve\"", ",", "description", "="...	38.53125	20.6875
def encode_pin(self, pin, matrix=None): """Transform correct PIN according to the displayed matrix.""" if matrix is None: _, matrix = self.read_pin() return "".join([str(matrix.index(p) + 1) for p in pin])	[ "def", "encode_pin", "(", "self", ",", "pin", ",", "matrix", "=", "None", ")", ":", "if", "matrix", "is", "None", ":", "_", ",", "matrix", "=", "self", ".", "read_pin", "(", ")", "return", "\"\"", ".", "join", "(", "[", "str", "(", "matrix", ".",...	47.4	7.8
def dynamicmap_memoization(callable_obj, streams): """ Determine whether the Callable should have memoization enabled based on the supplied streams (typically by a DynamicMap). Memoization is disabled if any of the streams require it it and are currently in a triggered state. """ memoization...	[ "def", "dynamicmap_memoization", "(", "callable_obj", ",", "streams", ")", ":", "memoization_state", "=", "bool", "(", "callable_obj", ".", "_stream_memoization", ")", "callable_obj", ".", "_stream_memoization", "&=", "not", "any", "(", "s", ".", "transient", "and...	38.133333	21.6
def _parse_module(self, uri): ''' Parse module defined in uri ''' filename = self._uri2path(uri) if filename is None: # nothing that we could handle here. return ([],[]) f = open(filename, 'rt') functions, classes = self._parse_lines(f) f.close()...	[ "def", "_parse_module", "(", "self", ",", "uri", ")", ":", "filename", "=", "self", ".", "_uri2path", "(", "uri", ")", "if", "filename", "is", "None", ":", "# nothing that we could handle here.", "return", "(", "[", "]", ",", "[", "]", ")", "f", "=", "...	34.5	9.9
def pdf(self, x, e=0., w=1., a=0.): """ probability density function see: https://en.wikipedia.org/wiki/Skew_normal_distribution :param x: input value :param e: :param w: :param a: :return: """ t = (x-e) / w return 2. / w * stats.no...	[ "def", "pdf", "(", "self", ",", "x", ",", "e", "=", "0.", ",", "w", "=", "1.", ",", "a", "=", "0.", ")", ":", "t", "=", "(", "x", "-", "e", ")", "/", "w", "return", "2.", "/", "w", "*", "stats", ".", "norm", ".", "pdf", "(", "t", ")",...	28.333333	15.166667
def minimize_algorithm_1dim_golden(function, a, b, c, tolerance=DOUBLE_TOL): ''' Given a function f, and given a bracketing triplet of abscissas ax, bx, cx (such that bx is between ax and cx, and f(bx) is less than both f(ax) and f(cx)), this routine performs a golden section search for the minimum, iso...	[ "def", "minimize_algorithm_1dim_golden", "(", "function", ",", "a", ",", "b", ",", "c", ",", "tolerance", "=", "DOUBLE_TOL", ")", ":", "x0", "=", "a", "x3", "=", "c", "if", "abs", "(", "c", "-", "b", ")", ">", "abs", "(", "b", "-", "a", ")", ":...	32.647059	22.392157
def _make_all_matchers(cls, parameters): ''' For every parameter, create a matcher if the parameter has an annotation. ''' for name, param in parameters: annotation = param.annotation if annotation is not Parameter.empty: yield name, cls._m...	[ "def", "_make_all_matchers", "(", "cls", ",", "parameters", ")", ":", "for", "name", ",", "param", "in", "parameters", ":", "annotation", "=", "param", ".", "annotation", "if", "annotation", "is", "not", "Parameter", ".", "empty", ":", "yield", "name", ","...	39.222222	17.222222
def lines(self) -> str: """Return the source code lines for this error.""" if self.definition is None: return '' source = '' lines = self.definition.source offset = self.definition.start # type: ignore lines_stripped = list(reversed(list(dropwhile(is_blank, ...	[ "def", "lines", "(", "self", ")", "->", "str", ":", "if", "self", ".", "definition", "is", "None", ":", "return", "''", "source", "=", "''", "lines", "=", "self", ".", "definition", ".", "source", "offset", "=", "self", ".", "definition", ".", "start...	40.421053	15.052632
def set_if_unset(self, key, value): """Set a particular spark property by the string key name if it hasn't already been set. This method allows chaining so that i can provide a similar feel to the standard Scala way of setting multiple configurations Parameters ---------- ...	[ "def", "set_if_unset", "(", "self", ",", "key", ",", "value", ")", ":", "if", "key", "not", "in", "self", ".", "_conf_dict", ":", "self", ".", "set", "(", "key", ",", "value", ")", "return", "self" ]	27.277778	21.888889
def robust_single_linkage(X, cut, k=5, alpha=1.4142135623730951, gamma=5, metric='euclidean', algorithm='best', memory=Memory(cachedir=None, verbose=0), leaf_size=40, core_dist_n_jobs=4, **kwargs): """Perform robust single linkage cluster...	[ "def", "robust_single_linkage", "(", "X", ",", "cut", ",", "k", "=", "5", ",", "alpha", "=", "1.4142135623730951", ",", "gamma", "=", "5", ",", "metric", "=", "'euclidean'", ",", "algorithm", "=", "'best'", ",", "memory", "=", "Memory", "(", "cachedir", ...	43.223602	22.10559
def parse(self, data): """Parse a 17 bytes packet in the Wind format and return a dictionary containing the data extracted. An example of a return value would be: .. code-block:: python { 'id': "0x2EB2", 'packet_length': 16, '...	[ "def", "parse", "(", "self", ",", "data", ")", ":", "self", ".", "validate_packet", "(", "data", ")", "results", "=", "self", ".", "parse_header_part", "(", "data", ")", "sub_type", "=", "results", "[", "'packet_subtype'", "]", "id_", "=", "self", ".", ...	30.626667	15.76
def template_chooser_clicked(self): """Slot activated when report file tool button is clicked. .. versionadded: 4.3.0 """ path = self.template_path.text() if not path: path = setting('lastCustomTemplate', '', str) if path: directory = dirname(path...	[ "def", "template_chooser_clicked", "(", "self", ")", ":", "path", "=", "self", ".", "template_path", ".", "text", "(", ")", "if", "not", "path", ":", "path", "=", "setting", "(", "'lastCustomTemplate'", ",", "''", ",", "str", ")", "if", "path", ":", "d...	32.684211	13.052632
def open_submission(self, url=None): """ Select the current submission to view posts. """ if url is None: data = self.get_selected_item() url = data['permalink'] if data.get('url_type') == 'selfpost': self.config.history.add(data['url_f...	[ "def", "open_submission", "(", "self", ",", "url", "=", "None", ")", ":", "if", "url", "is", "None", ":", "data", "=", "self", ".", "get_selected_item", "(", ")", "url", "=", "data", "[", "'permalink'", "]", "if", "data", ".", "get", "(", "'url_type'...	34.272727	11.545455
def get_google_links(limit, params, headers): """ function to fetch links equal to limit every Google search result page has a start index. every page contains 10 search results. """ links = [] for start_index in range(0, limit, 10): params['start'] = start_index resp = s.get("https://www.google.com/search"...	[ "def", "get_google_links", "(", "limit", ",", "params", ",", "headers", ")", ":", "links", "=", "[", "]", "for", "start_index", "in", "range", "(", "0", ",", "limit", ",", "10", ")", ":", "params", "[", "'start'", "]", "=", "start_index", "resp", "="...	32.071429	13.357143
def get_resource_agent_session(self): """Gets the session for retrieving resource agent mappings. return: (osid.resource.ResourceAgentSession) - a ``ResourceAgentSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_resource_ag...	[ "def", "get_resource_agent_session", "(", "self", ")", ":", "if", "not", "self", ".", "supports_resource_agent", "(", ")", ":", "raise", "errors", ".", "Unimplemented", "(", ")", "# pylint: disable=no-member", "return", "sessions", ".", "ResourceAgentSession", "(", ...	41.625	14.625
def starts_variation(self) -> bool: """ Checks if this node starts a variation (and can thus have a starting comment). The root node does not start a variation and can have no starting comment. For example, in ``1. e4 e5 (1... c5 2. Nf3) 2. Nf3``, the node holding 1... c...	[ "def", "starts_variation", "(", "self", ")", "->", "bool", ":", "if", "not", "self", ".", "parent", "or", "not", "self", ".", "parent", ".", "variations", ":", "return", "False", "return", "self", ".", "parent", ".", "variations", "[", "0", "]", "!=", ...	36.461538	19.538462
def on_canvas_slave__route_electrode_added(self, slave, electrode_id): ''' .. versionchanged:: 0.11 Draw temporary route currently being formed. .. versionchanged:: 0.11.3 Update routes table by setting ``df_routes`` property of :attr:`canvas_slave`. ...	[ "def", "on_canvas_slave__route_electrode_added", "(", "self", ",", "slave", ",", "electrode_id", ")", ":", "logger", ".", "debug", "(", "'Route electrode added: %s'", ",", "electrode_id", ")", "if", "slave", ".", "_route", ".", "electrode_ids", "is", "None", ":", ...	47.52381	23.238095
def buffer_typechecks_and_display(self, call_id, payload): """Adds typecheck events to the buffer, and displays them right away. This is a workaround for this issue: https://github.com/ensime/ensime-server/issues/1616 """ self.buffer_typechecks(call_id, payload) self.edi...	[ "def", "buffer_typechecks_and_display", "(", "self", ",", "call_id", ",", "payload", ")", ":", "self", ".", "buffer_typechecks", "(", "call_id", ",", "payload", ")", "self", ".", "editor", ".", "display_notes", "(", "self", ".", "buffered_notes", ")" ]	43.875	12.875
def fseq(self, client, message): """ fseq messages associate a unique frame id with a set of set and alive messages """ client.last_frame = client.current_frame client.current_frame = message[3]	[ "def", "fseq", "(", "self", ",", "client", ",", "message", ")", ":", "client", ".", "last_frame", "=", "client", ".", "current_frame", "client", ".", "current_frame", "=", "message", "[", "3", "]" ]	33.714286	8.285714
def money_receipts(pronac, dt): """ Checks how many items are in a same receipt when payment type is withdraw/money - is_outlier: True if there are any receipts that have more than one - itens_que_compartilham_comprovantes: List of items that share receipt """ df = verified_repeated_...	[ "def", "money_receipts", "(", "pronac", ",", "dt", ")", ":", "df", "=", "verified_repeated_receipts_for_pronac", "(", "pronac", ")", "comprovantes_saque", "=", "df", "[", "df", "[", "'tpFormaDePagamento'", "]", "==", "3.0", "]", "return", "metric_return", "(", ...	40.363636	19.272727
def fgp_dual(p, data, alpha, niter, grad, proj_C, proj_P, tol=None, **kwargs): """Computes a solution to the ROF problem with the fast gradient projection algorithm. Parameters ---------- p : np.array dual initial variable data : np.array noisy data / proximal point alpha : ...	[ "def", "fgp_dual", "(", "p", ",", "data", ",", "alpha", ",", "niter", ",", "grad", ",", "proj_C", ",", "proj_P", ",", "tol", "=", "None", ",", "", "", "kwargs", ")", ":", "# Callback object", "callback", "=", "kwargs", ".", "pop", "(", "'callback'"...	25.306818	21.681818
def id_to_object(self, line): """ Resolves an ip adres to a range object, creating it if it doesn't exists. """ result = Range.get(line, ignore=404) if not result: result = Range(range=line) result.save() return result	[ "def", "id_to_object", "(", "self", ",", "line", ")", ":", "result", "=", "Range", ".", "get", "(", "line", ",", "ignore", "=", "404", ")", "if", "not", "result", ":", "result", "=", "Range", "(", "range", "=", "line", ")", "result", ".", "save", ...	31.777778	12.666667
def _mpda(self, re_grammar, splitstring=0): """ Args: re_grammar (list): A list of grammar rules splitstring (bool): A boolean for enabling or disabling the splitting of symbols using a space Returns: PDA: The generated PDA ...	[ "def", "_mpda", "(", "self", ",", "re_grammar", ",", "splitstring", "=", "0", ")", ":", "cnfgrammar", "=", "CNFGenerator", "(", "re_grammar", ")", "if", "not", "self", ".", "alphabet", ":", "self", ".", "_extract_alphabet", "(", "cnfgrammar", ")", "cnftopd...	39.5	13.5
def useNonce(self, server_url, timestamp, salt): """Return whether this nonce is valid. str -> bool """ if abs(timestamp - time.time()) > nonce.SKEW: return False if server_url: proto, rest = server_url.split('://', 1) else: # Create ...	[ "def", "useNonce", "(", "self", ",", "server_url", ",", "timestamp", ",", "salt", ")", ":", "if", "abs", "(", "timestamp", "-", "time", ".", "time", "(", ")", ")", ">", "nonce", ".", "SKEW", ":", "return", "False", "if", "server_url", ":", "proto", ...	31.363636	19.818182
def hkdf(self, chaining_key, input_key_material, dhlen=64): """Hash-based key derivation function Takes a ``chaining_key'' byte sequence of len HASHLEN, and an ``input_key_material'' byte sequence with length either zero bytes, 32 bytes or dhlen bytes. Returns two byte sequence...	[ "def", "hkdf", "(", "self", ",", "chaining_key", ",", "input_key_material", ",", "dhlen", "=", "64", ")", ":", "if", "len", "(", "chaining_key", ")", "!=", "self", ".", "HASHLEN", ":", "raise", "HashError", "(", "\"Incorrect chaining key length\"", ")", "if"...	45.470588	19.588235
def nl_skipped_handler_debug(msg, arg): """https://github.com/thom311/libnl/blob/libnl3_2_25/lib/handlers.c#L134.""" ofd = arg or _LOGGER.debug ofd('-- Debug: Skipped message: ' + print_header_content(nlmsg_hdr(msg))) return NL_SKIP	[ "def", "nl_skipped_handler_debug", "(", "msg", ",", "arg", ")", ":", "ofd", "=", "arg", "or", "_LOGGER", ".", "debug", "ofd", "(", "'-- Debug: Skipped message: '", "+", "print_header_content", "(", "nlmsg_hdr", "(", "msg", ")", ")", ")", "return", "NL_SKIP" ]	48.8	14
def _calculate_scores(self): """Calculate the 'value' of each node in the graph based on how many blocking descendants it has. We use this score for the internal priority queue's ordering, so the quality of this metric is important. The score is stored as a negative number because the i...	[ "def", "_calculate_scores", "(", "self", ")", ":", "scores", "=", "{", "}", "for", "node", "in", "self", ".", "graph", ".", "nodes", "(", ")", ":", "score", "=", "-", "1", "*", "len", "(", "[", "d", "for", "d", "in", "nx", ".", "descendants", "...	40.96	22.44
def instructions(self): """ Return an iterator over this block's instructions. The iterator will yield a ValueRef for each instruction. """ if not self.is_block: raise ValueError('expected block value, got %s' % (self._kind,)) it = ffi.lib.LLVMPY_BlockInstruct...	[ "def", "instructions", "(", "self", ")", ":", "if", "not", "self", ".", "is_block", ":", "raise", "ValueError", "(", "'expected block value, got %s'", "%", "(", "self", ".", "_kind", ",", ")", ")", "it", "=", "ffi", ".", "lib", ".", "LLVMPY_BlockInstructio...	40.727273	12.545455
def to_dict(self, into=dict): """ Convert Series to {label -> value} dict or dict-like object. Parameters ---------- into : class, default dict The collections.abc.Mapping subclass to use as the return object. Can be the actual class or an empty ...	[ "def", "to_dict", "(", "self", ",", "into", "=", "dict", ")", ":", "# GH16122", "into_c", "=", "com", ".", "standardize_mapping", "(", "into", ")", "return", "into_c", "(", "self", ".", "items", "(", ")", ")" ]	31.735294	17.735294
def setrange(self, key, offset, value): """Overwrites part of the string stored at key, starting at the specified offset, for the entire length of value. If the offset is larger than the current length of the string at key, the string is padded with zero-bytes to make offset fit. Non-exi...	[ "def", "setrange", "(", "self", ",", "key", ",", "offset", ",", "value", ")", ":", "return", "self", ".", "_execute", "(", "[", "b'SETRANGE'", ",", "key", ",", "ascii", "(", "offset", ")", ",", "value", "]", ")" ]	54.02439	27.536585
def _grow(list_of_lists, num_new): """ Given a list of lists, and a number of new lists to add, copy the content of the first list into the new ones, and add them to the list of lists. """ first = list_of_lists[0] for i in range(num_new): list_of_lists.append(copy.deepcopy(first)) re...	[ "def", "_grow", "(", "list_of_lists", ",", "num_new", ")", ":", "first", "=", "list_of_lists", "[", "0", "]", "for", "i", "in", "range", "(", "num_new", ")", ":", "list_of_lists", ".", "append", "(", "copy", ".", "deepcopy", "(", "first", ")", ")", "...	36.666667	12.888889
def calculate_vss(self, method=None): """ Calculate the vertical swimming speed of this behavior. Takes into account the vertical swimming speed and the variance. Parameters: method: "gaussian" (default) or "random" "random" (vss - variance) < X...	[ "def", "calculate_vss", "(", "self", ",", "method", "=", "None", ")", ":", "if", "self", ".", "variance", "==", "float", "(", "0", ")", ":", "return", "self", ".", "vss", "else", ":", "# Calculate gausian distribution and return", "if", "method", "==", "\"...	41.35	19.95
def gcm_send_message(registration_id, data, encoding='utf-8', kwargs): """ Standalone method to send a single gcm notification """ messenger = GCMMessenger(registration_id, data, encoding=encoding, kwargs) return messenger.send_plain()	[ "def", "gcm_send_message", "(", "registration_id", ",", "data", ",", "encoding", "=", "'utf-8'", ",", "", "", "kwargs", ")", ":", "messenger", "=", "GCMMessenger", "(", "registration_id", ",", "data", ",", "encoding", "=", "encoding", ",", "", "", "kwa...	36.285714	19.142857
def get_platform_node_selector(self, platform): """ search the configuration for entries of the form node_selector.platform :param platform: str, platform to search for, can be null :return dict """ nodeselector = {} if platform: nodeselector_str = sel...	[ "def", "get_platform_node_selector", "(", "self", ",", "platform", ")", ":", "nodeselector", "=", "{", "}", "if", "platform", ":", "nodeselector_str", "=", "self", ".", "_get_value", "(", "\"node_selector.\"", "+", "platform", ",", "self", ".", "conf_section", ...	42.307692	23.384615
def allow_address_pairs(session, network, subnet): """Allow several interfaces to be added and accessed from the other machines. This is particularly useful when working with virtual ips. """ nclient = neutron.Client('2', session=session, region_name=os.environ['OS_REGION_N...	[ "def", "allow_address_pairs", "(", "session", ",", "network", ",", "subnet", ")", ":", "nclient", "=", "neutron", ".", "Client", "(", "'2'", ",", "session", "=", "session", ",", "region_name", "=", "os", ".", "environ", "[", "'OS_REGION_NAME'", "]", ")", ...	40.821429	15.678571
def pairwise(X): M = X.shape[0] N = X.shape[1] D = numpy.zeros((M,N)) "omp parallel for private(i,j,d,k,tmp)" for i in xrange(M): for j in xrange(M): d = 0.0 for k in xrange(N): tmp = X[i,k] - X[j,k] d += tmp * tmp D[i,j] = ...	[ "def", "pairwise", "(", "X", ")", ":", "M", "=", "X", ".", "shape", "[", "0", "]", "N", "=", "X", ".", "shape", "[", "1", "]", "D", "=", "numpy", ".", "zeros", "(", "(", "M", ",", "N", ")", ")", "for", "i", "in", "xrange", "(", "M", ")"...	25.615385	14.846154
def download_from(self, buff, remote_path): """Downloads file from WebDAV and writes it in buffer. :param buff: buffer object for writing of downloaded file content. :param remote_path: path to file on WebDAV server. """ urn = Urn(remote_path) if self.is_dir(urn.path()):...	[ "def", "download_from", "(", "self", ",", "buff", ",", "remote_path", ")", ":", "urn", "=", "Urn", "(", "remote_path", ")", "if", "self", ".", "is_dir", "(", "urn", ".", "path", "(", ")", ")", ":", "raise", "OptionNotValid", "(", "name", "=", "'remot...	39.066667	18.333333
def compose(*funcs): ''' Compose an ordered list of functions. Args of a,b,c,d evaluates as a(b(c(d(ctx)))) ''' def _compose(ctx): # last func gets context, rest get result of previous func _result = funcs[-1](ctx) for f in reversed(funcs[:-1]): _result = f(_result) ...	[ "def", "compose", "(", "*", "funcs", ")", ":", "def", "_compose", "(", "ctx", ")", ":", "# last func gets context, rest get result of previous func", "_result", "=", "funcs", "[", "-", "1", "]", "(", "ctx", ")", "for", "f", "in", "reversed", "(", "funcs", ...	29.25	22.75
def data_iter(batch_size, num_embed, pre_trained_word2vec=False): """Construct data iter Parameters ---------- batch_size: int num_embed: int pre_trained_word2vec: boolean identify the pre-trained layers or not Returns ---------- train_set: DataIter ...	[ "def", "data_iter", "(", "batch_size", ",", "num_embed", ",", "pre_trained_word2vec", "=", "False", ")", ":", "print", "(", "'Loading data...'", ")", "if", "pre_trained_word2vec", ":", "word2vec", "=", "data_helpers", ".", "load_pretrained_word2vec", "(", "'data/rt....	32.677966	16.118644
def CRRAutility_invP(u, gam): ''' Evaluates the derivative of the inverse of the CRRA utility function (with risk aversion parameter gam) at a given utility level u. Parameters ---------- u : float Utility value gam : float Risk aversion Returns ------- (unnamed...	[ "def", "CRRAutility_invP", "(", "u", ",", "gam", ")", ":", "if", "gam", "==", "1", ":", "return", "np", ".", "exp", "(", "u", ")", "else", ":", "return", "(", "(", "(", "1.0", "-", "gam", ")", "", "u", ")", "*", "(", "gam", "/", "(", "1.0...	23.047619	25.619048
def expect_element(__funcname=_qualified_name, **named): """ Preprocessing decorator that verifies inputs are elements of some expected collection. Examples -------- >>> @expect_element(x=('a', 'b')) ... def foo(x): ... return x.upper() ... >>> foo('a') 'A' >>> foo('b...	[ "def", "expect_element", "(", "__funcname", "=", "_qualified_name", ",", "", "", "named", ")", ":", "def", "_expect_element", "(", "collection", ")", ":", "if", "isinstance", "(", "collection", ",", "(", "set", ",", "frozenset", ")", ")", ":", "# Special...	33.557692	23.173077
def variance_inflation_factors(df): ''' Computes the variance inflation factor (VIF) for each column in the df. Returns a pandas Series of VIFs Args: df: pandas DataFrame with columns to run diagnostics on ''' corr = np.corrcoef(df, rowvar=0) corr_inv = np.linalg.inv(corr) vifs ...	[ "def", "variance_inflation_factors", "(", "df", ")", ":", "corr", "=", "np", ".", "corrcoef", "(", "df", ",", "rowvar", "=", "0", ")", "corr_inv", "=", "np", ".", "linalg", ".", "inv", "(", "corr", ")", "vifs", "=", "np", ".", "diagonal", "(", "cor...	31.916667	19.416667
def Update(self, env, args=None): """ Update an environment with the option variables. env - the environment to update. """ values = {} # first set the defaults: for option in self.options: if not option.default is None: values[optio...	[ "def", "Update", "(", "self", ",", "env", ",", "args", "=", "None", ")", ":", "values", "=", "{", "}", "# first set the defaults:", "for", "option", "in", "self", ".", "options", ":", "if", "not", "option", ".", "default", "is", "None", ":", "values", ...	34.794118	16.117647
def unregister(name, delete=False): ''' Unregister a VM CLI Example: .. code-block:: bash salt '*' vboxmanage.unregister my_vm_filename ''' nodes = list_nodes_min() if name not in nodes: raise CommandExecutionError( 'The specified VM ({0}) is not registered.'.f...	[ "def", "unregister", "(", "name", ",", "delete", "=", "False", ")", ":", "nodes", "=", "list_nodes_min", "(", ")", "if", "name", "not", "in", "nodes", ":", "raise", "CommandExecutionError", "(", "'The specified VM ({0}) is not registered.'", ".", "format", "(", ...	23.608696	21.521739
def utrecht(mag_file, dir_path=".", input_dir_path="", meas_file="measurements.txt", spec_file="specimens.txt", samp_file="samples.txt", site_file="sites.txt", loc_file="locations.txt", location="unknown", lat="", lon="", dmy_flag=False, noave=False, meas_n_orient=8, meth_code="LP-N...	[ "def", "utrecht", "(", "mag_file", ",", "dir_path", "=", "\".\"", ",", "input_dir_path", "=", "\"\"", ",", "meas_file", "=", "\"measurements.txt\"", ",", "spec_file", "=", "\"specimens.txt\"", ",", "samp_file", "=", "\"samples.txt\"", ",", "site_file", "=", "\"s...	40.343558	17.815951
def beacon(config): ''' The journald beacon allows for the systemd journal to be parsed and linked objects to be turned into events. This beacons config will return all sshd jornal entries .. code-block:: yaml beacons: journald: - services: sshd: ...	[ "def", "beacon", "(", "config", ")", ":", "ret", "=", "[", "]", "journal", "=", "_get_journal", "(", ")", "_config", "=", "{", "}", "list", "(", "map", "(", "_config", ".", "update", ",", "config", ")", ")", "while", "True", ":", "cur", "=", "jou...	28.02439	20.512195
def l2_distance_sq(t1, t2, name=None): """Square of l2 distance between t1 and t2. Args: t1: A tensor. t2: A tensor that is the same size as t1. name: Optional name for this op. Returns: The l2 distance between t1 and t2. """ with tf.name_scope(name, 'l2_distance_sq', [t1, t2]) as scope: ...	[ "def", "l2_distance_sq", "(", "t1", ",", "t2", ",", "name", "=", "None", ")", ":", "with", "tf", ".", "name_scope", "(", "name", ",", "'l2_distance_sq'", ",", "[", "t1", ",", "t2", "]", ")", "as", "scope", ":", "t1", "=", "tf", ".", "convert_to_ten...	32.214286	13.5
def trimUTR(args): """ %prog trimUTR gffile Remove UTRs in the annotation set. If reference GFF3 is provided, reinstate UTRs from reference transcripts after trimming. Note: After running trimUTR, it is advised to also run `python -m jcvi.formats.gff fixboundaries` on the resultant GFF3 ...	[ "def", "trimUTR", "(", "args", ")", ":", "import", "gffutils", "from", "jcvi", ".", "formats", ".", "base", "import", "SetFile", "p", "=", "OptionParser", "(", "trimUTR", ".", "__doc__", ")", "p", ".", "add_option", "(", "\"--trim5\"", ",", "default", "=...	44.160714	19.5
def do_terminateInstance(self,args): """Terminate an EC2 instance""" parser = CommandArgumentParser("terminateInstance") parser.add_argument(dest='instance',help='instance index or name'); args = vars(parser.parse_args(args)) instanceId = args['instance'] try: ...	[ "def", "do_terminateInstance", "(", "self", ",", "args", ")", ":", "parser", "=", "CommandArgumentParser", "(", "\"terminateInstance\"", ")", "parser", ".", "add_argument", "(", "dest", "=", "'instance'", ",", "help", "=", "'instance index or name'", ")", "args", ...	39.470588	18.588235
def loadTableData(df, df_key='index',table="node", \ table_key_column = "name", network="current",\ namespace="default",\ host=cytoscape_host,port=cytoscape_port,verbose=False): """ Loads tables into cytoscape :param df: a pan...	[ "def", "loadTableData", "(", "df", ",", "df_key", "=", "'index'", ",", "table", "=", "\"node\"", ",", "table_key_column", "=", "\"name\"", ",", "network", "=", "\"current\"", ",", "namespace", "=", "\"default\"", ",", "host", "=", "cytoscape_host", ",", "por...	30.265823	17.987342
def get_samples_live_last(self, sensor_id): """Get the last sample recorded by the sensor. Args: sensor_id (string): hexadecimal id of the sensor to query, e.g. ``0x0013A20040B65FAD`` Returns: list: dictionary objects containing sample data """ url = "https://api.neur.io/v1/sam...	[ "def", "get_samples_live_last", "(", "self", ",", "sensor_id", ")", ":", "url", "=", "\"https://api.neur.io/v1/samples/live/last\"", "headers", "=", "self", ".", "__gen_headers", "(", ")", "headers", "[", "\"Content-Type\"", "]", "=", "\"application/json\"", "params",...	27.65	18.6
def check_value_error_for_parity(value_error: ValueError, call_type: ParityCallType) -> bool: """ For parity failing calls and functions do not return None if the transaction will fail but instead throw a ValueError exception. This function checks the thrown exception to see if it's the correct one and...	[ "def", "check_value_error_for_parity", "(", "value_error", ":", "ValueError", ",", "call_type", ":", "ParityCallType", ")", "->", "bool", ":", "try", ":", "error_data", "=", "json", ".", "loads", "(", "str", "(", "value_error", ")", ".", "replace", "(", "\"'...	40	25.307692
def GetFlagSuggestions(attempt, longopt_list): """Get helpful similar matches for an invalid flag.""" # Don't suggest on very short strings, or if no longopts are specified. if len(attempt) <= 2 or not longopt_list: return [] option_names = [v.split('=')[0] for v in longopt_list] # Find close approximat...	[ "def", "GetFlagSuggestions", "(", "attempt", ",", "longopt_list", ")", ":", "# Don't suggest on very short strings, or if no longopts are specified.", "if", "len", "(", "attempt", ")", "<=", "2", "or", "not", "longopt_list", ":", "return", "[", "]", "option_names", "=...	33.538462	20.307692
def build_api(packages, input, output, sanitizer, excluded_modules=None): """ Builds the Sphinx documentation API. :param packages: Packages to include in the API. :type packages: list :param input: Input modules directory. :type input: unicode :param output: Output reStructuredText files d...	[ "def", "build_api", "(", "packages", ",", "input", ",", "output", ",", "sanitizer", ",", "excluded_modules", "=", "None", ")", ":", "LOGGER", ".", "info", "(", "\"{0} \| Building Sphinx documentation API!\"", ".", "format", "(", "build_api", ".", "__name__", ")",...	45.991667	24.558333
def decorate(func, caller): """ decorate(func, caller) decorates a function using a caller. """ evaldict = func.__globals__.copy() evaldict['_call_'] = caller evaldict['_func_'] = func fun = FunctionMaker.create( func, "return _call_(_func_, %(shortsignature)s)", evaldict, __...	[ "def", "decorate", "(", "func", ",", "caller", ")", ":", "evaldict", "=", "func", ".", "__globals__", ".", "copy", "(", ")", "evaldict", "[", "'_call_'", "]", "=", "caller", "evaldict", "[", "'_func_'", "]", "=", "func", "fun", "=", "FunctionMaker", "....	32.384615	9.461538
def get_mean_and_stddevs(self, sites, rup, dists, imt, stddev_types): """ Implements equation 3.5.1-1 page 148 for mean value and equation 3.5.5-1 page 151 for total standard deviation. See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` ...	[ "def", "get_mean_and_stddevs", "(", "self", ",", "sites", ",", "rup", ",", "dists", ",", "imt", ",", "stddev_types", ")", ":", "mean", ",", "stddevs", "=", "super", "(", ")", ".", "get_mean_and_stddevs", "(", "sites", ",", "rup", ",", "dists", ",", "im...	46	18.142857
def add_mavlink_packet(self, msg): '''add data to the graph''' mtype = msg.get_type() if mtype not in self.msg_types: return for i in range(len(self.fields)): if mtype not in self.field_types[i]: continue f = self.fields[i] ...	[ "def", "add_mavlink_packet", "(", "self", ",", "msg", ")", ":", "mtype", "=", "msg", ".", "get_type", "(", ")", "if", "mtype", "not", "in", "self", ".", "msg_types", ":", "return", "for", "i", "in", "range", "(", "len", "(", "self", ".", "fields", ...	39.5	11.5
def list_comments(self, topic_id, start=0): """ 回复列表 :param topic_id: 话题ID :param start: 翻页 :return: 带下一页的列表 """ xml = self.api.xml(API_GROUP_GET_TOPIC % topic_id, params={'start': start}) xml_results = xml.xpath('//ul[@id="comments"]/li') ...	[ "def", "list_comments", "(", "self", ",", "topic_id", ",", "start", "=", "0", ")", ":", "xml", "=", "self", ".", "api", ".", "xml", "(", "API_GROUP_GET_TOPIC", "%", "topic_id", ",", "params", "=", "{", "'start'", ":", "start", "}", ")", "xml_results", ...	44.764706	18.529412
def _handle_delete(self, transaction): """ Handle DELETE requests :type transaction: Transaction :param transaction: the transaction that owns the request :rtype : Transaction :return: the edited transaction with the response to the request """ path = str...	[ "def", "_handle_delete", "(", "self", ",", "transaction", ")", ":", "path", "=", "str", "(", "\"/\"", "+", "transaction", ".", "request", ".", "uri_path", ")", "transaction", ".", "response", "=", "Response", "(", ")", "transaction", ".", "response", ".", ...	36.6	17.8
def stdout_avail(self): """Data is available in stdout, let's empty the queue and write it!""" data = self.interpreter.stdout_write.empty_queue() if data: self.write(data)	[ "def", "stdout_avail", "(", "self", ")", ":", "data", "=", "self", ".", "interpreter", ".", "stdout_write", ".", "empty_queue", "(", ")", "if", "data", ":", "self", ".", "write", "(", "data", ")" ]	41.4	14
def features_check_singular(X, tol=1e-8): """Checks if a set of features/variables X result in a ill-conditioned matrix dot(X.T,T) Parameters: ----------- X : ndarray An NxM array with N observations (rows) and M features/variables (columns). Note: Make sure that X variable...	[ "def", "features_check_singular", "(", "X", ",", "tol", "=", "1e-8", ")", ":", "import", "numpy", "as", "np", "_", ",", "s", ",", "_", "=", "np", ".", "linalg", ".", "svd", "(", "np", ".", "dot", "(", "X", ".", "T", ",", "X", ")", ")", "faile...	30.452381	21.238095
def load_hdf(cls, filename, path='', name=None): """ A class method to load a saved StarModel from an HDF5 file. File must have been created by a call to :func:`StarModel.save_hdf`. :param filename: H5 file to load. :param path: (optional) Path within H...	[ "def", "load_hdf", "(", "cls", ",", "filename", ",", "path", "=", "''", ",", "name", "=", "None", ")", ":", "if", "not", "os", ".", "path", ".", "exists", "(", "filename", ")", ":", "raise", "IOError", "(", "'{} does not exist.'", ".", "format", "(",...	26.464286	18.821429
def add_network(self, network, netmask, area=0): """Adds a network to be advertised by OSPF Args: network (str): The network to be advertised in dotted decimal notation netmask (str): The netmask to configure area (str): ...	[ "def", "add_network", "(", "self", ",", "network", ",", "netmask", ",", "area", "=", "0", ")", ":", "if", "network", "==", "''", "or", "netmask", "==", "''", ":", "raise", "ValueError", "(", "'network and mask values '", "'may not be empty'", ")", "cmd", "...	44.45	16
def get_token_from_env(): """Get the token from env var, VAULT_TOKEN. If not set, attempt to get the token from, ~/.vault-token :return: The vault token if set, else None :rtype: str \| None """ token = os.getenv('VAULT_TOKEN') if not token: token_file_path = os.path.expanduser('~/.vault...	[ "def", "get_token_from_env", "(", ")", ":", "token", "=", "os", ".", "getenv", "(", "'VAULT_TOKEN'", ")", "if", "not", "token", ":", "token_file_path", "=", "os", ".", "path", ".", "expanduser", "(", "'~/.vault-token'", ")", "if", "os", ".", "path", ".",...	30	17.294118
def convert_to_layout_rules(x): """Converts input to a LayoutRules. Args: x: LayoutRules, str, or set-like of string pairs. Returns: LayoutRules. """ if isinstance(x, LayoutRules): return x if isinstance(x, str): x = _parse_string_to_list_of_pairs(x) return LayoutRules(x)	[ "def", "convert_to_layout_rules", "(", "x", ")", ":", "if", "isinstance", "(", "x", ",", "LayoutRules", ")", ":", "return", "x", "if", "isinstance", "(", "x", ",", "str", ")", ":", "x", "=", "_parse_string_to_list_of_pairs", "(", "x", ")", "return", "Lay...	20.785714	18.5
def _call_apt(args, scope=True, *kwargs): ''' Call apt utilities. ''' cmd = [] if scope and salt.utils.systemd.has_scope(__context__) and __salt__['config.get']('systemd.scope', True): cmd.extend(['systemd-run', '--scope']) cmd.extend(args) params = {'output_loglevel': 'trace', ...	[ "def", "_call_apt", "(", "args", ",", "scope", "=", "True", ",", "", "", "kwargs", ")", ":", "cmd", "=", "[", "]", "if", "scope", "and", "salt", ".", "utils", ".", "systemd", ".", "has_scope", "(", "__context__", ")", "and", "__salt__", "[", "'co...	33.066667	23.6
def _get_redis_cache_opts(): ''' Return the Redis server connection details from the __opts__. ''' return { 'host': __opts__.get('cache.redis.host', 'localhost'), 'port': __opts__.get('cache.redis.port', 6379), 'unix_socket_path': __opts__.get('cache.redis.unix_socket_path', None...	[ "def", "_get_redis_cache_opts", "(", ")", ":", "return", "{", "'host'", ":", "__opts__", ".", "get", "(", "'cache.redis.host'", ",", "'localhost'", ")", ",", "'port'", ":", "__opts__", ".", "get", "(", "'cache.redis.port'", ",", "6379", ")", ",", "'unix_sock...	49	29.142857
def get_config(self): """ Currently only contains the "config" member, which is a string containing the config file as loaded by i3 most recently. :rtype: ConfigReply """ data = self.message(MessageType.GET_CONFIG, '') return json.loads(data, object_hook=ConfigRe...	[ "def", "get_config", "(", "self", ")", ":", "data", "=", "self", ".", "message", "(", "MessageType", ".", "GET_CONFIG", ",", "''", ")", "return", "json", ".", "loads", "(", "data", ",", "object_hook", "=", "ConfigReply", ")" ]	35.111111	17.555556
def get_eids(self, num_rlzs): """ :param num_rlzs: the number of realizations for the given group :returns: an array of event IDs """ num_events = self.n_occ if self.samples > 1 else self.n_occ * num_rlzs return TWO32 * U64(self.serial) + numpy.arange(num_events, dtype=U6...	[ "def", "get_eids", "(", "self", ",", "num_rlzs", ")", ":", "num_events", "=", "self", ".", "n_occ", "if", "self", ".", "samples", ">", "1", "else", "self", ".", "n_occ", "", "num_rlzs", "return", "TWO32", "", "U64", "(", "self", ".", "serial", ")",...	45.142857	16.857143
def _author_line(self): """ Helper method to concatenate author and institution values, if necessary :return: string """ if self.author and self.institution: return self.author + ";" + self.institution elif self.author: return self.author e...	[ "def", "_author_line", "(", "self", ")", ":", "if", "self", ".", "author", "and", "self", ".", "institution", ":", "return", "self", ".", "author", "+", "\";\"", "+", "self", ".", "institution", "elif", "self", ".", "author", ":", "return", "self", "."...	31.818182	13.636364
def assertDutTraceDoesNotContain(dut, message, bench): """ Raise TestStepFail if bench.verify_trace does not find message from dut traces. :param dut: Dut object. :param message: Message to look for. :param: Bench, must contain verify_trace method. :raises: AttributeError if bench does not cont...	[ "def", "assertDutTraceDoesNotContain", "(", "dut", ",", "message", ",", "bench", ")", ":", "if", "not", "hasattr", "(", "bench", ",", "\"verify_trace\"", ")", ":", "raise", "AttributeError", "(", "\"Bench object does not contain verify_trace method!\"", ")", "if", "...	45.428571	17.714286
def qr(X, ip_B=None, reorthos=1): """QR factorization with customizable inner product. :param X: array with ``shape==(N,k)`` :param ip_B: (optional) inner product, see :py:meth:`inner`. :param reorthos: (optional) numer of reorthogonalizations. Defaults to 1 (i.e. 2 runs of modified Gram-Schmidt)...	[ "def", "qr", "(", "X", ",", "ip_B", "=", "None", ",", "reorthos", "=", "1", ")", ":", "if", "ip_B", "is", "None", "and", "X", ".", "shape", "[", "1", "]", ">", "0", ":", "return", "scipy", ".", "linalg", ".", "qr", "(", "X", ",", "mode", "=...	38.428571	15.678571
def deal(self, num=1, end=TOP): """ Returns a list of cards, which are removed from the Stack. :arg int num: The number of cards to deal. :arg str end: Which end to deal from. Can be ``0`` (top) or ``1`` (bottom). :returns: The given number o...	[ "def", "deal", "(", "self", ",", "num", "=", "1", ",", "end", "=", "TOP", ")", ":", "ends", "=", "{", "TOP", ":", "self", ".", "cards", ".", "pop", ",", "BOTTOM", ":", "self", ".", "cards", ".", "popleft", "}", "self_size", "=", "self", ".", ...	25.588235	18.823529
def create_version(self, name, project, description=None, releaseDate=None, startDate=None, archived=False, released=False, ): "...	[ "def", "create_version", "(", "self", ",", "name", ",", "project", ",", "description", "=", "None", ",", "releaseDate", "=", "None", ",", "startDate", "=", "None", ",", "archived", "=", "False", ",", "released", "=", "False", ",", ")", ":", "data", "="...	35.744681	14.021277
def _ModifyInterface( self, interface_config, config_key, config_value, replace=False): """Write a value to a config file if not already present. Args: interface_config: string, the path to a config file. config_key: string, the configuration key to set. config_value: string, the value ...	[ "def", "_ModifyInterface", "(", "self", ",", "interface_config", ",", "config_key", ",", "config_value", ",", "replace", "=", "False", ")", ":", "config_entry", "=", "'%s=%s'", "%", "(", "config_key", ",", "config_value", ")", "if", "not", "open", "(", "inte...	46.352941	20.352941
def get_ip_mac_arp_list(auth, url, devid=None, devip=None): """ function takes devid of specific device and issues a RESTFUL call to get the IP/MAC/ARP list from the target device. :param auth: requests auth object #usually auth.creds from auth pyhpeimc.auth.class :param url: base url of IMC RS in...	[ "def", "get_ip_mac_arp_list", "(", "auth", ",", "url", ",", "devid", "=", "None", ",", "devip", "=", "None", ")", ":", "if", "devip", "is", "not", "None", ":", "dev_details", "=", "get_dev_details", "(", "devip", ",", "auth", ",", "url", ")", "if", "...	35.36	25.52
def add_debug(parser): """Add a `debug` flag to the _parser_.""" parser.add_argument( '-d', '--debug', action='store_const', const=logging.DEBUG, default=logging.INFO, help='Set DEBUG output')	[ "def", "add_debug", "(", "parser", ")", ":", "parser", ".", "add_argument", "(", "'-d'", ",", "'--debug'", ",", "action", "=", "'store_const'", ",", "const", "=", "logging", ".", "DEBUG", ",", "default", "=", "logging", ".", "INFO", ",", "help", "=", "...	51.25	27

def select_down(self): """move cursor down""" r, c = self._index self._select_index(r+1, c)

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28

9.5

def create(self, language, query, tasks=values.unset, model_build=values.unset, field=values.unset): """ Create a new QueryInstance :param unicode language: An ISO language-country string of the sample. :param unicode query: A user-provided string that uniquely identifies...

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49.655172

35.931034

def get_frames(self): "Define an iterator that will return frames at the given blocksize" nb_frames = self.input_totalframes // self.output_blocksize if self.input_totalframes % self.output_blocksize == 0: nb_frames -= 1 # Last frame must send eod=True for index in xrange(...

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44.153846

27.076923

def stop(self): """ Stop the reader """ # print('stopping NonBlockingStreamReader..') # print('acquire..') NonBlockingStreamReader._stream_mtx.acquire() # print('acquire..ok') NonBlockingStreamReader._streams.remove(self._descriptor) if not NonBloc...

[ "def", "stop", "(", "self", ")", ":", "# print('stopping NonBlockingStreamReader..')", "# print('acquire..')", "NonBlockingStreamReader", ".", "_stream_mtx", ".", "acquire", "(", ")", "# print('acquire..ok')", "NonBlockingStreamReader", ".", "_streams", ".", "remove", "(", ...

37.5

11

def do_speak(self, args): """Repeats what you tell me to.""" words = [] for word in args.words: if args.piglatin: word = '%s%say' % (word[1:], word[0]) if args.shout: word = word.upper() words.append(word) repetitions =...

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32.5

16.863636

def network_expansion(network, method = 'rel', ext_min=0.1, ext_width=False, filename=None, boundaries=[]): """Plot relative or absolute network extension of AC- and DC-lines. Parameters ---------- network: PyPSA network container Holds topology of grid including resul...

[ "def", "network_expansion", "(", "network", ",", "method", "=", "'rel'", ",", "ext_min", "=", "0.1", ",", "ext_width", "=", "False", ",", "filename", "=", "None", ",", "boundaries", "=", "[", "]", ")", ":", "cmap", "=", "plt", ".", "cm", ".", "jet", ...

38.780303

21.25

def get_subarray_sbi_ids(sub_array_id): """Return list of scheduling block Id's associated with the given sub_array_id """ ids = [] for key in sorted(DB.keys(pattern='scheduling_block/*')): config = json.loads(DB.get(key)) if config['sub_array_id'] == sub_array_id: ids.ap...

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34.4

11.4

def get_time(filename): """ Get the modified time for a file as a datetime instance """ ts = os.stat(filename).st_mtime return datetime.datetime.utcfromtimestamp(ts)

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28.333333

7.666667

def get_vmware_inventory_path(): """ Returns VMware inventory file path. :returns: path to the inventory file """ if sys.platform.startswith("win"): return os.path.expandvars(r"%APPDATA%\Vmware\Inventory.vmls") elif sys.platform.startswith("darwin"): ...

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36.692308

18.846154

def fit(self, data, debug=False): """ Fit each segment. Segments that have not already been explicitly added will be automatically added with default model and ytransform. Parameters ---------- data : pandas.DataFrame Must have a column with the same name as ...

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37.125

22.525

def _get_dbal_column_type(self, type_): """ Get the dbal column type. :param type_: The fluent type :type type_: str :rtype: str """ type_ = type_.lower() if type_ == "enum": return "string" return super(PostgresSchemaGrammar, self)...

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22.333333

18.866667

def plot_brillouin_zone(bz_lattice, lines=None, labels=None, kpoints=None, fold=False, coords_are_cartesian=False, ax=None, **kwargs): """ Plots a 3D representation of the Brillouin zone of the structure. Can add to the plot paths, labels and kpoints Args...

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36.84

21

def file_path(self, request, response=None, info=None): """ 抓取到的资源存放到七牛的时候, 应该采用什么样的key? 返回的path是一个JSON字符串, 其中有bucket和key的信息 """ return json.dumps(self._extract_key_info(request))

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41.4

13

def qvalues(pv, m = None, verbose = False, lowmem = False, pi0 = None): """ Copyright (c) 2012, Nicolo Fusi, University of Sheffield All rights reserved. Estimates q-values from p-values Args ===== m: number of tests. If not specified m = pv.size verbose: print verbose messages? (defa...

[ "def", "qvalues", "(", "pv", ",", "m", "=", "None", ",", "verbose", "=", "False", ",", "lowmem", "=", "False", ",", "pi0", "=", "None", ")", ":", "assert", "(", "pv", ".", "min", "(", ")", ">=", "0", "and", "pv", ".", "max", "(", ")", "<=", ...

27.642857

21.561224

def phi(v): """Neutrino direction in polar coordinates. ``phi``, ``theta`` is the opposite of ``zenith``, ``azimuth``. Angles in radians. """ v = np.atleast_2d(v) dir_x = v[:, 0] dir_y = v[:, 1] return phi_separg(dir_x, dir_y)

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22.727273

19.636364

def _write_str(self, data): """ Converts the given data then writes it :param data: Data to be written :return: The result of ``self.output.write()`` """ with self.__lock: self.output.write( to_str(data, self.encoding) .encode(...

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29.538462

12.615385

def assign_site_properties(self, slab, height=0.9): """ Assigns site properties. """ if 'surface_properties' in slab.site_properties.keys(): return slab else: surf_sites = self.find_surface_sites_by_height(slab, height) surf_props = ['surface' if s...

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40

16

def findElementsWithId(node, elems=None): """ Returns all elements with id attributes """ if elems is None: elems = {} id = node.getAttribute('id') if id != '': elems[id] = node if node.hasChildNodes(): for child in node.childNodes: # from http://www.w3.or...

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33.625

13.75

def quic_graph_lasso_cv(X, metric): """Run QuicGraphicalLassoCV on data with metric of choice. Compare results with GridSearchCV + quic_graph_lasso. The number of lambdas tested should be much lower with similar final lam_ selected. """ print("QuicGraphicalLassoCV with:") print(" metric: {}"...

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37.35

15.6

def route(route_str): # decorator param """ Provides play2 likes routes, with python formatter All string fileds should be named parameters :param route_str: a route "GET /parent/{parentID}/child/{childId}{ctype}" :return: the response of requests.request """ def ilog(elapsed): # s...

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45.049505

24.673267

def parse(self, line, **options): """\ Parse a line and return (cmd, args, kwargs) - cmd may be False if it wasn't parseable. Relatively simple in the Regex parser - anything can be "parsed", but is not guaranteed to match. """ line = line.strip() if not ...

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31.928571

13

def histogram(a, bins=10, range=None, **kwargs): """Compute the histogram of the input data. Parameters ---------- a : NDArray Input data. The histogram is computed over the flattened array. bins : int or sequence of scalars If bins is an int, it defines the number of equal-width bi...

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46.413793

26.551724

def publish(idx=None): """Publish packaged distributions to pypi index""" if idx is None: idx = '' else: idx = '-r ' + idx run('python setup.py register {}'.format(idx)) run('twine upload {} dist/*.whl dist/*.egg dist/*.tar.gz'.format(idx))

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33.625

19.125

def cli(): """Parse options from the command line""" parser = argparse.ArgumentParser(prog="sphinx-serve", formatter_class=argparse.ArgumentDefaultsHelpFormatter, conflict_handler="resolve", descriptio...

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38.53125

20.6875

def encode_pin(self, pin, matrix=None): """Transform correct PIN according to the displayed matrix.""" if matrix is None: _, matrix = self.read_pin() return "".join([str(matrix.index(p) + 1) for p in pin])

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47.4

7.8

def dynamicmap_memoization(callable_obj, streams): """ Determine whether the Callable should have memoization enabled based on the supplied streams (typically by a DynamicMap). Memoization is disabled if any of the streams require it it and are currently in a triggered state. """ memoization...

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38.133333

21.6

def _parse_module(self, uri): ''' Parse module defined in *uri* ''' filename = self._uri2path(uri) if filename is None: # nothing that we could handle here. return ([],[]) f = open(filename, 'rt') functions, classes = self._parse_lines(f) f.close()...

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34.5

9.9

def pdf(self, x, e=0., w=1., a=0.): """ probability density function see: https://en.wikipedia.org/wiki/Skew_normal_distribution :param x: input value :param e: :param w: :param a: :return: """ t = (x-e) / w return 2. / w * stats.no...

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28.333333

15.166667

def minimize_algorithm_1dim_golden(function, a, b, c, tolerance=DOUBLE_TOL): ''' Given a function f, and given a bracketing triplet of abscissas ax, bx, cx (such that bx is between ax and cx, and f(bx) is less than both f(ax) and f(cx)), this routine performs a golden section search for the minimum, iso...

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def _make_all_matchers(cls, parameters): ''' For every parameter, create a matcher if the parameter has an annotation. ''' for name, param in parameters: annotation = param.annotation if annotation is not Parameter.empty: yield name, cls._m...

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def lines(self) -> str: """Return the source code lines for this error.""" if self.definition is None: return '' source = '' lines = self.definition.source offset = self.definition.start # type: ignore lines_stripped = list(reversed(list(dropwhile(is_blank, ...

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def set_if_unset(self, key, value): """Set a particular spark property by the string key name if it hasn't already been set. This method allows chaining so that i can provide a similar feel to the standard Scala way of setting multiple configurations Parameters ---------- ...

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def robust_single_linkage(X, cut, k=5, alpha=1.4142135623730951, gamma=5, metric='euclidean', algorithm='best', memory=Memory(cachedir=None, verbose=0), leaf_size=40, core_dist_n_jobs=4, **kwargs): """Perform robust single linkage cluster...

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def parse(self, data): """Parse a 17 bytes packet in the Wind format and return a dictionary containing the data extracted. An example of a return value would be: .. code-block:: python { 'id': "0x2EB2", 'packet_length': 16, '...

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def template_chooser_clicked(self): """Slot activated when report file tool button is clicked. .. versionadded: 4.3.0 """ path = self.template_path.text() if not path: path = setting('lastCustomTemplate', '', str) if path: directory = dirname(path...

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def open_submission(self, url=None): """ Select the current submission to view posts. """ if url is None: data = self.get_selected_item() url = data['permalink'] if data.get('url_type') == 'selfpost': self.config.history.add(data['url_f...

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def get_google_links(limit, params, headers): """ function to fetch links equal to limit every Google search result page has a start index. every page contains 10 search results. """ links = [] for start_index in range(0, limit, 10): params['start'] = start_index resp = s.get("https://www.google.com/search"...

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def get_resource_agent_session(self): """Gets the session for retrieving resource agent mappings. return: (osid.resource.ResourceAgentSession) - a ``ResourceAgentSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_resource_ag...

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def starts_variation(self) -> bool: """ Checks if this node starts a variation (and can thus have a starting comment). The root node does not start a variation and can have no starting comment. For example, in ``1. e4 e5 (1... c5 2. Nf3) 2. Nf3``, the node holding 1... c...

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def on_canvas_slave__route_electrode_added(self, slave, electrode_id): ''' .. versionchanged:: 0.11 Draw temporary route currently being formed. .. versionchanged:: 0.11.3 Update routes table by setting ``df_routes`` property of :attr:`canvas_slave`. ...

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def buffer_typechecks_and_display(self, call_id, payload): """Adds typecheck events to the buffer, and displays them right away. This is a workaround for this issue: https://github.com/ensime/ensime-server/issues/1616 """ self.buffer_typechecks(call_id, payload) self.edi...

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def fseq(self, client, message): """ fseq messages associate a unique frame id with a set of set and alive messages """ client.last_frame = client.current_frame client.current_frame = message[3]

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def money_receipts(pronac, dt): """ Checks how many items are in a same receipt when payment type is withdraw/money - is_outlier: True if there are any receipts that have more than one - itens_que_compartilham_comprovantes: List of items that share receipt """ df = verified_repeated_...

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def fgp_dual(p, data, alpha, niter, grad, proj_C, proj_P, tol=None, **kwargs): """Computes a solution to the ROF problem with the fast gradient projection algorithm. Parameters ---------- p : np.array dual initial variable data : np.array noisy data / proximal point alpha : ...

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def id_to_object(self, line): """ Resolves an ip adres to a range object, creating it if it doesn't exists. """ result = Range.get(line, ignore=404) if not result: result = Range(range=line) result.save() return result

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def _mpda(self, re_grammar, splitstring=0): """ Args: re_grammar (list): A list of grammar rules splitstring (bool): A boolean for enabling or disabling the splitting of symbols using a space Returns: PDA: The generated PDA ...

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def useNonce(self, server_url, timestamp, salt): """Return whether this nonce is valid. str -> bool """ if abs(timestamp - time.time()) > nonce.SKEW: return False if server_url: proto, rest = server_url.split('://', 1) else: # Create ...

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def hkdf(self, chaining_key, input_key_material, dhlen=64): """Hash-based key derivation function Takes a ``chaining_key'' byte sequence of len HASHLEN, and an ``input_key_material'' byte sequence with length either zero bytes, 32 bytes or dhlen bytes. Returns two byte sequence...

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def nl_skipped_handler_debug(msg, arg): """https://github.com/thom311/libnl/blob/libnl3_2_25/lib/handlers.c#L134.""" ofd = arg or _LOGGER.debug ofd('-- Debug: Skipped message: ' + print_header_content(nlmsg_hdr(msg))) return NL_SKIP

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def _calculate_scores(self): """Calculate the 'value' of each node in the graph based on how many blocking descendants it has. We use this score for the internal priority queue's ordering, so the quality of this metric is important. The score is stored as a negative number because the i...

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def instructions(self): """ Return an iterator over this block's instructions. The iterator will yield a ValueRef for each instruction. """ if not self.is_block: raise ValueError('expected block value, got %s' % (self._kind,)) it = ffi.lib.LLVMPY_BlockInstruct...

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def to_dict(self, into=dict): """ Convert Series to {label -> value} dict or dict-like object. Parameters ---------- into : class, default dict The collections.abc.Mapping subclass to use as the return object. Can be the actual class or an empty ...

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def setrange(self, key, offset, value): """Overwrites part of the string stored at key, starting at the specified offset, for the entire length of value. If the offset is larger than the current length of the string at key, the string is padded with zero-bytes to make offset fit. Non-exi...

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def _grow(list_of_lists, num_new): """ Given a list of lists, and a number of new lists to add, copy the content of the first list into the new ones, and add them to the list of lists. """ first = list_of_lists[0] for i in range(num_new): list_of_lists.append(copy.deepcopy(first)) re...

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def calculate_vss(self, method=None): """ Calculate the vertical swimming speed of this behavior. Takes into account the vertical swimming speed and the variance. Parameters: method: "gaussian" (default) or "random" "random" (vss - variance) < X...

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def gcm_send_message(registration_id, data, encoding='utf-8', **kwargs): """ Standalone method to send a single gcm notification """ messenger = GCMMessenger(registration_id, data, encoding=encoding, **kwargs) return messenger.send_plain()

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def get_platform_node_selector(self, platform): """ search the configuration for entries of the form node_selector.platform :param platform: str, platform to search for, can be null :return dict """ nodeselector = {} if platform: nodeselector_str = sel...

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def allow_address_pairs(session, network, subnet): """Allow several interfaces to be added and accessed from the other machines. This is particularly useful when working with virtual ips. """ nclient = neutron.Client('2', session=session, region_name=os.environ['OS_REGION_N...

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def pairwise(X): M = X.shape[0] N = X.shape[1] D = numpy.zeros((M,N)) "omp parallel for private(i,j,d,k,tmp)" for i in xrange(M): for j in xrange(M): d = 0.0 for k in xrange(N): tmp = X[i,k] - X[j,k] d += tmp * tmp D[i,j] = ...

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def download_from(self, buff, remote_path): """Downloads file from WebDAV and writes it in buffer. :param buff: buffer object for writing of downloaded file content. :param remote_path: path to file on WebDAV server. """ urn = Urn(remote_path) if self.is_dir(urn.path()):...

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def compose(*funcs): ''' Compose an ordered list of functions. Args of a,b,c,d evaluates as a(b(c(d(ctx)))) ''' def _compose(ctx): # last func gets context, rest get result of previous func _result = funcs[-1](ctx) for f in reversed(funcs[:-1]): _result = f(_result) ...

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def data_iter(batch_size, num_embed, pre_trained_word2vec=False): """Construct data iter Parameters ---------- batch_size: int num_embed: int pre_trained_word2vec: boolean identify the pre-trained layers or not Returns ---------- train_set: DataIter ...

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def CRRAutility_invP(u, gam): ''' Evaluates the derivative of the inverse of the CRRA utility function (with risk aversion parameter gam) at a given utility level u. Parameters ---------- u : float Utility value gam : float Risk aversion Returns ------- (unnamed...

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def expect_element(__funcname=_qualified_name, **named): """ Preprocessing decorator that verifies inputs are elements of some expected collection. Examples -------- >>> @expect_element(x=('a', 'b')) ... def foo(x): ... return x.upper() ... >>> foo('a') 'A' >>> foo('b...

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def variance_inflation_factors(df): ''' Computes the variance inflation factor (VIF) for each column in the df. Returns a pandas Series of VIFs Args: df: pandas DataFrame with columns to run diagnostics on ''' corr = np.corrcoef(df, rowvar=0) corr_inv = np.linalg.inv(corr) vifs ...

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def Update(self, env, args=None): """ Update an environment with the option variables. env - the environment to update. """ values = {} # first set the defaults: for option in self.options: if not option.default is None: values[optio...

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def unregister(name, delete=False): ''' Unregister a VM CLI Example: .. code-block:: bash salt '*' vboxmanage.unregister my_vm_filename ''' nodes = list_nodes_min() if name not in nodes: raise CommandExecutionError( 'The specified VM ({0}) is not registered.'.f...

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def utrecht(mag_file, dir_path=".", input_dir_path="", meas_file="measurements.txt", spec_file="specimens.txt", samp_file="samples.txt", site_file="sites.txt", loc_file="locations.txt", location="unknown", lat="", lon="", dmy_flag=False, noave=False, meas_n_orient=8, meth_code="LP-N...

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40.343558

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def beacon(config): ''' The journald beacon allows for the systemd journal to be parsed and linked objects to be turned into events. This beacons config will return all sshd jornal entries .. code-block:: yaml beacons: journald: - services: sshd: ...

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def l2_distance_sq(t1, t2, name=None): """Square of l2 distance between t1 and t2. Args: t1: A tensor. t2: A tensor that is the same size as t1. name: Optional name for this op. Returns: The l2 distance between t1 and t2. """ with tf.name_scope(name, 'l2_distance_sq', [t1, t2]) as scope: ...

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def trimUTR(args): """ %prog trimUTR gffile Remove UTRs in the annotation set. If reference GFF3 is provided, reinstate UTRs from reference transcripts after trimming. Note: After running trimUTR, it is advised to also run `python -m jcvi.formats.gff fixboundaries` on the resultant GFF3 ...

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19.5

def do_terminateInstance(self,args): """Terminate an EC2 instance""" parser = CommandArgumentParser("terminateInstance") parser.add_argument(dest='instance',help='instance index or name'); args = vars(parser.parse_args(args)) instanceId = args['instance'] try: ...

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39.470588

18.588235

def loadTableData(df, df_key='index',table="node", \ table_key_column = "name", network="current",\ namespace="default",\ host=cytoscape_host,port=cytoscape_port,verbose=False): """ Loads tables into cytoscape :param df: a pan...

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30.265823

17.987342

def get_samples_live_last(self, sensor_id): """Get the last sample recorded by the sensor. Args: sensor_id (string): hexadecimal id of the sensor to query, e.g. ``0x0013A20040B65FAD`` Returns: list: dictionary objects containing sample data """ url = "https://api.neur.io/v1/sam...

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27.65

18.6

def check_value_error_for_parity(value_error: ValueError, call_type: ParityCallType) -> bool: """ For parity failing calls and functions do not return None if the transaction will fail but instead throw a ValueError exception. This function checks the thrown exception to see if it's the correct one and...

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40

25.307692

def GetFlagSuggestions(attempt, longopt_list): """Get helpful similar matches for an invalid flag.""" # Don't suggest on very short strings, or if no longopts are specified. if len(attempt) <= 2 or not longopt_list: return [] option_names = [v.split('=')[0] for v in longopt_list] # Find close approximat...

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33.538462

20.307692

def build_api(packages, input, output, sanitizer, excluded_modules=None): """ Builds the Sphinx documentation API. :param packages: Packages to include in the API. :type packages: list :param input: Input modules directory. :type input: unicode :param output: Output reStructuredText files d...

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45.991667

24.558333

def decorate(func, caller): """ decorate(func, caller) decorates a function using a caller. """ evaldict = func.__globals__.copy() evaldict['_call_'] = caller evaldict['_func_'] = func fun = FunctionMaker.create( func, "return _call_(_func_, %(shortsignature)s)", evaldict, __...

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32.384615

9.461538

def get_mean_and_stddevs(self, sites, rup, dists, imt, stddev_types): """ Implements equation 3.5.1-1 page 148 for mean value and equation 3.5.5-1 page 151 for total standard deviation. See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` ...

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46

18.142857

def add_mavlink_packet(self, msg): '''add data to the graph''' mtype = msg.get_type() if mtype not in self.msg_types: return for i in range(len(self.fields)): if mtype not in self.field_types[i]: continue f = self.fields[i] ...

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39.5

11.5

def list_comments(self, topic_id, start=0): """ 回复列表 :param topic_id: 话题ID :param start: 翻页 :return: 带下一页的列表 """ xml = self.api.xml(API_GROUP_GET_TOPIC % topic_id, params={'start': start}) xml_results = xml.xpath('//ul[@id="comments"]/li') ...

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44.764706

18.529412

def _handle_delete(self, transaction): """ Handle DELETE requests :type transaction: Transaction :param transaction: the transaction that owns the request :rtype : Transaction :return: the edited transaction with the response to the request """ path = str...

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36.6

17.8

def stdout_avail(self): """Data is available in stdout, let's empty the queue and write it!""" data = self.interpreter.stdout_write.empty_queue() if data: self.write(data)

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41.4

14

def features_check_singular(X, tol=1e-8): """Checks if a set of features/variables X result in a ill-conditioned matrix dot(X.T,T) Parameters: ----------- X : ndarray An NxM array with N observations (rows) and M features/variables (columns). Note: Make sure that X variable...

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30.452381

21.238095

def load_hdf(cls, filename, path='', name=None): """ A class method to load a saved StarModel from an HDF5 file. File must have been created by a call to :func:`StarModel.save_hdf`. :param filename: H5 file to load. :param path: (optional) Path within H...

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26.464286

18.821429

def add_network(self, network, netmask, area=0): """Adds a network to be advertised by OSPF Args: network (str): The network to be advertised in dotted decimal notation netmask (str): The netmask to configure area (str): ...

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44.45

16

def get_token_from_env(): """Get the token from env var, VAULT_TOKEN. If not set, attempt to get the token from, ~/.vault-token :return: The vault token if set, else None :rtype: str | None """ token = os.getenv('VAULT_TOKEN') if not token: token_file_path = os.path.expanduser('~/.vault...

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30

17.294118

def convert_to_layout_rules(x): """Converts input to a LayoutRules. Args: x: LayoutRules, str, or set-like of string pairs. Returns: LayoutRules. """ if isinstance(x, LayoutRules): return x if isinstance(x, str): x = _parse_string_to_list_of_pairs(x) return LayoutRules(x)

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20.785714

18.5

def _call_apt(args, scope=True, **kwargs): ''' Call apt* utilities. ''' cmd = [] if scope and salt.utils.systemd.has_scope(__context__) and __salt__['config.get']('systemd.scope', True): cmd.extend(['systemd-run', '--scope']) cmd.extend(args) params = {'output_loglevel': 'trace', ...

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33.066667

23.6

def _get_redis_cache_opts(): ''' Return the Redis server connection details from the __opts__. ''' return { 'host': __opts__.get('cache.redis.host', 'localhost'), 'port': __opts__.get('cache.redis.port', 6379), 'unix_socket_path': __opts__.get('cache.redis.unix_socket_path', None...

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49

29.142857

def get_config(self): """ Currently only contains the "config" member, which is a string containing the config file as loaded by i3 most recently. :rtype: ConfigReply """ data = self.message(MessageType.GET_CONFIG, '') return json.loads(data, object_hook=ConfigRe...

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35.111111

17.555556

def get_eids(self, num_rlzs): """ :param num_rlzs: the number of realizations for the given group :returns: an array of event IDs """ num_events = self.n_occ if self.samples > 1 else self.n_occ * num_rlzs return TWO32 * U64(self.serial) + numpy.arange(num_events, dtype=U6...

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45.142857

16.857143

def _author_line(self): """ Helper method to concatenate author and institution values, if necessary :return: string """ if self.author and self.institution: return self.author + ";" + self.institution elif self.author: return self.author e...

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31.818182

13.636364

def assertDutTraceDoesNotContain(dut, message, bench): """ Raise TestStepFail if bench.verify_trace does not find message from dut traces. :param dut: Dut object. :param message: Message to look for. :param: Bench, must contain verify_trace method. :raises: AttributeError if bench does not cont...

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45.428571

17.714286

def qr(X, ip_B=None, reorthos=1): """QR factorization with customizable inner product. :param X: array with ``shape==(N,k)`` :param ip_B: (optional) inner product, see :py:meth:`inner`. :param reorthos: (optional) numer of reorthogonalizations. Defaults to 1 (i.e. 2 runs of modified Gram-Schmidt)...

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38.428571

15.678571

def deal(self, num=1, end=TOP): """ Returns a list of cards, which are removed from the Stack. :arg int num: The number of cards to deal. :arg str end: Which end to deal from. Can be ``0`` (top) or ``1`` (bottom). :returns: The given number o...

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25.588235

18.823529

def create_version(self, name, project, description=None, releaseDate=None, startDate=None, archived=False, released=False, ): "...

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35.744681

14.021277

def _ModifyInterface( self, interface_config, config_key, config_value, replace=False): """Write a value to a config file if not already present. Args: interface_config: string, the path to a config file. config_key: string, the configuration key to set. config_value: string, the value ...

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46.352941

20.352941

def get_ip_mac_arp_list(auth, url, devid=None, devip=None): """ function takes devid of specific device and issues a RESTFUL call to get the IP/MAC/ARP list from the target device. :param auth: requests auth object #usually auth.creds from auth pyhpeimc.auth.class :param url: base url of IMC RS in...

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35.36

25.52

def add_debug(parser): """Add a `debug` flag to the _parser_.""" parser.add_argument( '-d', '--debug', action='store_const', const=logging.DEBUG, default=logging.INFO, help='Set DEBUG output')

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51.25

27