kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def input_file(self, _container): """Find the input path of a uchroot container.""" p = local.path(_container) if set_input_container(p, CFG): return p = find_hash(CFG["container"]["known"].value, container) if set_input_container(p, CFG): return ...	[ "def", "input_file", "(", "self", ",", "_container", ")", ":", "p", "=", "local", ".", "path", "(", "_container", ")", "if", "set_input_container", "(", "p", ",", "CFG", ")", ":", "return", "p", "=", "find_hash", "(", "CFG", "[", "\"container\"", "]", ...	33.727273	17.454545
def ip_rtm_config_route_static_route_nh_vrf_static_route_next_hop(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") ip = ET.SubElement(config, "ip", xmlns="urn:brocade.com:mgmt:brocade-common-def") rtm_config = ET.SubElement(ip, "rtm-config", xmlns="urn:br...	[ "def", "ip_rtm_config_route_static_route_nh_vrf_static_route_next_hop", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "ip", "=", "ET", ".", "SubElement", "(", "config", ",", "\"ip\"", ",", "xmlns",...	61.352941	29.764706
def get_markdown_files(self, dir_): """ Get all the markdown files in a folder, recursively Args: dir_: str, a toplevel folder to walk. """ md_files = OrderedSet() for root, _, files in os.walk(dir_): for name in files: split = os....	[ "def", "get_markdown_files", "(", "self", ",", "dir_", ")", ":", "md_files", "=", "OrderedSet", "(", ")", "for", "root", ",", "_", ",", "files", "in", "os", ".", "walk", "(", "dir_", ")", ":", "for", "name", "in", "files", ":", "split", "=", "os", ...	33.375	12.625
def proj_path(*path_parts): # type: (str) -> str """ Return absolute path to the repo dir (root project directory). Args: path (str): The path relative to the project root (pelconf.yaml). Returns: str: The given path converted to an absolute path. """ path_parts = p...	[ "def", "proj_path", "(", "*", "path_parts", ")", ":", "# type: (str) -> str", "path_parts", "=", "path_parts", "or", "[", "'.'", "]", "# If path represented by path_parts is absolute, do not modify it.", "if", "not", "os", ".", "path", ".", "isabs", "(", "path_parts",...	29.333333	20.238095
def _update_axes_color(self, color): """Internal helper to set the axes label color""" prop_x = self.axes_actor.GetXAxisCaptionActor2D().GetCaptionTextProperty() prop_y = self.axes_actor.GetYAxisCaptionActor2D().GetCaptionTextProperty() prop_z = self.axes_actor.GetZAxisCaptionActor2D().G...	[ "def", "_update_axes_color", "(", "self", ",", "color", ")", ":", "prop_x", "=", "self", ".", "axes_actor", ".", "GetXAxisCaptionActor2D", "(", ")", ".", "GetCaptionTextProperty", "(", ")", "prop_y", "=", "self", ".", "axes_actor", ".", "GetYAxisCaptionActor2D",...	49.166667	17.416667
def make_published(self, request, queryset): """ Bulk action to mark selected posts as published. If the date_published field is empty the current time is saved as date_published. queryset must not be empty (ensured by DjangoCMS). """ cnt1 = queryset.filter( ...	[ "def", "make_published", "(", "self", ",", "request", ",", "queryset", ")", ":", "cnt1", "=", "queryset", ".", "filter", "(", "date_published__isnull", "=", "True", ",", "publish", "=", "False", ",", ")", ".", "update", "(", "date_published", "=", "timezon...	41.157895	9.473684
def get_slot(self): """ Get the slot position of this pair. """ corner, edge = self.get_pair() corner_slot, edge_slot = corner.location.replace("D", "", 1), edge.location if "U" not in corner_slot and corner_slot not in ["FR", "RB", "BL", "LF"]: corner_slot = ...	[ "def", "get_slot", "(", "self", ")", ":", "corner", ",", "edge", "=", "self", ".", "get_pair", "(", ")", "corner_slot", ",", "edge_slot", "=", "corner", ".", "location", ".", "replace", "(", "\"D\"", ",", "\"\"", ",", "1", ")", ",", "edge", ".", "l...	56.428571	23.47619
def enable_nvm(): '''add to ~/.bashrc: Export of $NVM env variable and load nvm command.''' bash_snippet = '~/.bashrc_nvm' install_file_legacy(path=bash_snippet) prefix = flo('if [ -f {bash_snippet} ]; ') enabler = flo('if [ -f {bash_snippet} ]; then source {bash_snippet}; fi') if env.host == '...	[ "def", "enable_nvm", "(", ")", ":", "bash_snippet", "=", "'~/.bashrc_nvm'", "install_file_legacy", "(", "path", "=", "bash_snippet", ")", "prefix", "=", "flo", "(", "'if [ -f {bash_snippet} ]; '", ")", "enabler", "=", "flo", "(", "'if [ -f {bash_snippet} ]; then sourc...	48.727273	21.272727
def process_summary(article): """Ensures summaries are not cut off. Also inserts mathjax script so that math will be rendered""" summary = article.summary summary_parsed = BeautifulSoup(summary, 'html.parser') math = summary_parsed.find_all(class_='math') if len(math) > 0: last_math_te...	[ "def", "process_summary", "(", "article", ")", ":", "summary", "=", "article", ".", "summary", "summary_parsed", "=", "BeautifulSoup", "(", "summary", ",", "'html.parser'", ")", "math", "=", "summary_parsed", ".", "find_all", "(", "class_", "=", "'math'", ")",...	43.521739	21.913043
def _create_variables(self, n_features, W_=None, bh_=None, bv_=None): """Create the TensorFlow variables for the model. :return: self """ if W_: self.W_ = tf.Variable(W_, name='enc-w') else: self.W_ = tf.Variable( tf.truncated_normal( ...	[ "def", "_create_variables", "(", "self", ",", "n_features", ",", "W_", "=", "None", ",", "bh_", "=", "None", ",", "bv_", "=", "None", ")", ":", "if", "W_", ":", "self", ".", "W_", "=", "tf", ".", "Variable", "(", "W_", ",", "name", "=", "'enc-w'"...	33.541667	20.458333
def poke(self, session, address, width, data): """Writes an 8, 16, 32, or 64-bit value from the specified address. Corresponds to viPoke* functions of the VISA library. :param session: Unique logical identifier to a session. :param address: Source address to read the value. :pa...	[ "def", "poke", "(", "self", ",", "session", ",", "address", ",", "width", ",", "data", ")", ":", "if", "width", "==", "8", ":", "return", "self", ".", "poke_8", "(", "session", ",", "address", ",", "data", ")", "elif", "width", "==", "16", ":", "...	40	19.130435
def partition_source(src): """Partitions source into a list of `CodePartition`s for import refactoring. """ # In python2, ast.parse(text_string_with_encoding_pragma) raises # SyntaxError: encoding declaration in Unicode string ast_obj = ast.parse(src.encode('UTF-8')) visitor = TopLevelImport...	[ "def", "partition_source", "(", "src", ")", ":", "# In python2, ast.parse(text_string_with_encoding_pragma) raises", "# SyntaxError: encoding declaration in Unicode string", "ast_obj", "=", "ast", ".", "parse", "(", "src", ".", "encode", "(", "'UTF-8'", ")", ")", "visitor",...	43.5	18.131579
def port_policy_present(name, sel_type, protocol=None, port=None, sel_range=None): ''' .. versionadded:: 2019.2.0 Makes sure an SELinux port policy for a given port, protocol and SELinux context type is present. name The protocol and port spec. Can be formatted as ``(tcp\|udp)/(port\|port-range)...	[ "def", "port_policy_present", "(", "name", ",", "sel_type", ",", "protocol", "=", "None", ",", "port", "=", "None", ",", "sel_range", "=", "None", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'result'", ":", "False", ",", "'changes'", ":", ...	34.45283	24.90566
def _process_sasl_challenge(self, stream, element): """Process incoming <sasl:challenge/> element. [initiating entity only] """ if not self.authenticator: logger.debug("Unexpected SASL challenge") return False content = element.text.encode("us-ascii") ...	[ "def", "_process_sasl_challenge", "(", "self", ",", "stream", ",", "element", ")", ":", "if", "not", "self", ".", "authenticator", ":", "logger", ".", "debug", "(", "\"Unexpected SASL challenge\"", ")", "return", "False", "content", "=", "element", ".", "text"...	32.166667	17.041667
def GetHasherClasses(cls, hasher_names=None): """Retrieves the registered hashers. Args: hasher_names (list[str]): names of the hashers to retrieve. Yields: tuple: containing: str: parser name type: next hasher class. """ for hasher_name, hasher_class in iter(cls._...	[ "def", "GetHasherClasses", "(", "cls", ",", "hasher_names", "=", "None", ")", ":", "for", "hasher_name", ",", "hasher_class", "in", "iter", "(", "cls", ".", "_hasher_classes", ".", "items", "(", ")", ")", ":", "if", "not", "hasher_names", "or", "hasher_nam...	28.533333	19.666667
def index(ctx, view): """Index the database.""" adapter = ctx.obj['adapter'] if view: click.echo(adapter.indexes()) return adapter.ensure_indexes()	[ "def", "index", "(", "ctx", ",", "view", ")", ":", "adapter", "=", "ctx", ".", "obj", "[", "'adapter'", "]", "if", "view", ":", "click", ".", "echo", "(", "adapter", ".", "indexes", "(", ")", ")", "return", "adapter", ".", "ensure_indexes", "(", ")...	24.714286	13.714286
def _determine_os_workload_status( configs, required_interfaces, charm_func=None, services=None, ports=None): """Determine the state of the workload status for the charm. This function returns the new workload status for the charm based on the state of the interfaces, the paused state and w...	[ "def", "_determine_os_workload_status", "(", "configs", ",", "required_interfaces", ",", "charm_func", "=", "None", ",", "services", "=", "None", ",", "ports", "=", "None", ")", ":", "state", ",", "message", "=", "_ows_check_if_paused", "(", "services", ",", "...	40.693878	23.77551
def status_human(self): """ Human readable status :return: * `DOWNLOADING`: the task is downloading files * `BEING TRANSFERRED`: the task is being transferred * `TRANSFERRED`: the task has been transferred to downloads \ directory ...	[ "def", "status_human", "(", "self", ")", ":", "res", "=", "None", "if", "self", ".", "_deleted", ":", "return", "'DELETED'", "if", "self", ".", "status", "==", "1", ":", "res", "=", "'DOWNLOADING'", "elif", "self", ".", "status", "==", "2", ":", "if"...	29.675676	14.972973
def mean_abs(self): """return the median of absolute values""" # XXX rename this method if len(self.values) > 0: return sorted(map(abs, self.values))[len(self.values) / 2] else: return None	[ "def", "mean_abs", "(", "self", ")", ":", "# XXX rename this method", "if", "len", "(", "self", ".", "values", ")", ">", "0", ":", "return", "sorted", "(", "map", "(", "abs", ",", "self", ".", "values", ")", ")", "[", "len", "(", "self", ".", "valu...	34.142857	15.857143
def bitfieldify(buff, count): """Extract a bitarray out of a bytes array. Some hardware devices read from the LSB to the MSB, but the bit types available prefer to put pad bits on the LSB side, completely changing the data. This function takes in bytes and the number of bits to extract starting from t...	[ "def", "bitfieldify", "(", "buff", ",", "count", ")", ":", "databits", "=", "bitarray", "(", ")", "databits", ".", "frombytes", "(", "buff", ")", "return", "databits", "[", "len", "(", "databits", ")", "-", "count", ":", "]" ]	38.416667	26.916667
def namedb_get_all_namespace_ids( cur ): """ Get a list of all READY namespace IDs. """ query = "SELECT namespace_id FROM namespaces WHERE op = ?;" args = (NAMESPACE_READY,) namespace_rows = namedb_query_execute( cur, query, args ) ret = [] for namespace_row in namespace_rows: ...	[ "def", "namedb_get_all_namespace_ids", "(", "cur", ")", ":", "query", "=", "\"SELECT namespace_id FROM namespaces WHERE op = ?;\"", "args", "=", "(", "NAMESPACE_READY", ",", ")", "namespace_rows", "=", "namedb_query_execute", "(", "cur", ",", "query", ",", "args", ")"...	26.142857	17.285714
def _add_transaction_to_canonical_chain(db: BaseDB, transaction_hash: Hash32, block_header: BlockHeader, index: int) -> None: """ :param bytes transaction_hash: the hash of...	[ "def", "_add_transaction_to_canonical_chain", "(", "db", ":", "BaseDB", ",", "transaction_hash", ":", "Hash32", ",", "block_header", ":", "BlockHeader", ",", "index", ":", "int", ")", "->", "None", ":", "transaction_key", "=", "TransactionKey", "(", "block_header"...	57.25	27.875
def node_type(node: astroid.node_classes.NodeNG) -> Optional[type]: """Return the inferred type for `node` If there is more than one possible type, or if inferred type is Uninferable or None, return None """ # check there is only one possible type for the assign node. Else we # don't handle it ...	[ "def", "node_type", "(", "node", ":", "astroid", ".", "node_classes", ".", "NodeNG", ")", "->", "Optional", "[", "type", "]", ":", "# check there is only one possible type for the assign node. Else we", "# don't handle it for now", "types", "=", "set", "(", ")", "try"...	34.526316	18.157895
def print(self, txt: str, hold: bool=False) -> None: """ Conditionally print txt :param txt: text to print :param hold: If true, hang on to the text until another print comes through :param hold: If true, drop both print statements if another hasn't intervened :return: "...	[ "def", "print", "(", "self", ",", "txt", ":", "str", ",", "hold", ":", "bool", "=", "False", ")", "->", "None", ":", "if", "hold", ":", "self", ".", "held_prints", "[", "self", ".", "trace_depth", "]", "=", "txt", "elif", "self", ".", "held_prints"...	40	18
def set_cursor_enter_callback(window, cbfun): """ Sets the cursor enter/exit callback. Wrapper for: GLFWcursorenterfun glfwSetCursorEnterCallback(GLFWwindow* window, GLFWcursorenterfun cbfun); """ window_addr = ctypes.cast(ctypes.pointer(window), ctypes.POINTER...	[ "def", "set_cursor_enter_callback", "(", "window", ",", "cbfun", ")", ":", "window_addr", "=", "ctypes", ".", "cast", "(", "ctypes", ".", "pointer", "(", "window", ")", ",", "ctypes", ".", "POINTER", "(", "ctypes", ".", "c_long", ")", ")", ".", "contents...	39.666667	19.095238
def InternalRecv(self): """Receives a message from the device, including defragmenting it.""" first_read = self.InternalReadFrame() first_packet = UsbHidTransport.InitPacket.FromWireFormat(self.packet_size, first_read) data = first_packet.pay...	[ "def", "InternalRecv", "(", "self", ")", ":", "first_read", "=", "self", ".", "InternalReadFrame", "(", ")", "first_packet", "=", "UsbHidTransport", ".", "InitPacket", ".", "FromWireFormat", "(", "self", ".", "packet_size", ",", "first_read", ")", "data", "=",...	39.4	21.714286
def set_host(ip, alias): ''' Set the host entry in the hosts file for the given ip, this will overwrite any previous entry for the given ip .. versionchanged:: 2016.3.0 If ``alias`` does not include any host names (it is the empty string or contains only whitespace), all entries for the...	[ "def", "set_host", "(", "ip", ",", "alias", ")", ":", "hfn", "=", "_get_or_create_hostfile", "(", ")", "ovr", "=", "False", "if", "not", "os", ".", "path", ".", "isfile", "(", "hfn", ")", ":", "return", "False", "# Make sure future calls to _list_hosts() wil...	30.892857	18.107143
def strainer(self): """ Determine whether it is required to run the MLST analyses """ # Initialise a variable to store whether the analyses need to be performed analyse = list() for sample in self.runmetadata.samples: if sample.general.bestassemblyfile != 'NA'...	[ "def", "strainer", "(", "self", ")", ":", "# Initialise a variable to store whether the analyses need to be performed", "analyse", "=", "list", "(", ")", "for", "sample", "in", "self", ".", "runmetadata", ".", "samples", ":", "if", "sample", ".", "general", ".", "...	56.953488	25.651163
def _get_dacl(path, objectType): ''' Gets the DACL of a path ''' try: dacl = win32security.GetNamedSecurityInfo( path, objectType, win32security.DACL_SECURITY_INFORMATION ).GetSecurityDescriptorDacl() except Exception: dacl = None return dacl	[ "def", "_get_dacl", "(", "path", ",", "objectType", ")", ":", "try", ":", "dacl", "=", "win32security", ".", "GetNamedSecurityInfo", "(", "path", ",", "objectType", ",", "win32security", ".", "DACL_SECURITY_INFORMATION", ")", ".", "GetSecurityDescriptorDacl", "(",...	26.909091	20.363636
def dict_array_bytes_required(arrays, template): """ Return the number of bytes required by a dictionary of arrays. Arguments --------------- arrays : list A list of dictionaries defining the arrays template : dict A dictionary of key-values, used to replace any stri...	[ "def", "dict_array_bytes_required", "(", "arrays", ",", "template", ")", ":", "return", "np", ".", "sum", "(", "[", "dict_array_bytes", "(", "ary", ",", "template", ")", "for", "ary", "in", "arrays", "]", ")" ]	25.857143	17.47619
def collides(self, other): """Returns collision with axis aligned rect""" angle = self.angle width = self.width height = self.height if angle == 0: return other.collides(Rect(-0.5 * width, -0.5 * height, width, height)) ...	[ "def", "collides", "(", "self", ",", "other", ")", ":", "angle", "=", "self", ".", "angle", "width", "=", "self", ".", "width", "height", "=", "self", ".", "height", "if", "angle", "==", "0", ":", "return", "other", ".", "collides", "(", "Rect", "(...	32	22.258065
def calibration_plot(self, analytes=None, datarange=True, loglog=False, ncol=3, srm_group=None, save=True): """ Plot the calibration lines between measured and known SRM values. Parameters ---------- analytes : optional, array_like or str The analyte(s) to plot. Defaults to all analytes. ...	[ "def", "calibration_plot", "(", "self", ",", "analytes", "=", "None", ",", "datarange", "=", "True", ",", "loglog", "=", "False", ",", "ncol", "=", "3", ",", "srm_group", "=", "None", ",", "save", "=", "True", ")", ":", "if", "isinstance", "(", "anal...	33.892	19.86
def append_json( self, obj: Any, headers: Optional['MultiMapping[str]']=None ) -> Payload: """Helper to append JSON part.""" if headers is None: headers = CIMultiDict() return self.append_payload(JsonPayload(obj, headers=headers))	[ "def", "append_json", "(", "self", ",", "obj", ":", "Any", ",", "headers", ":", "Optional", "[", "'MultiMapping[str]'", "]", "=", "None", ")", "->", "Payload", ":", "if", "headers", "is", "None", ":", "headers", "=", "CIMultiDict", "(", ")", "return", ...	29.8	19.1
def add_indices(self, indices, distance_matrix): '''Adds extra indices for the combinatorial problem. Arguments --------- indices : tuple distance_matrix : numpy.ndarray (M,M) Example ------- >>> add_indices((1,2), numpy.array((5,5))) [(1, 2, 3),...	[ "def", "add_indices", "(", "self", ",", "indices", ",", "distance_matrix", ")", ":", "list_new_indices", "=", "[", "]", "for", "i", "in", "range", "(", "0", ",", "len", "(", "distance_matrix", ")", ")", ":", "if", "i", "not", "in", "indices", ":", "l...	28.263158	18.789474
def compile_dir(env, src_path, dst_path, pattern=r'^.*\.html$', encoding='utf-8', base_dir=None): """Compiles a directory of Jinja2 templates to python code. :param env: a Jinja2 Environment instance. :param src_path: path to the source directory. :param dst_path: path to the destination directory. :param ...	[ "def", "compile_dir", "(", "env", ",", "src_path", ",", "dst_path", ",", "pattern", "=", "r'^.*\\.html$'", ",", "encoding", "=", "'utf-8'", ",", "base_dir", "=", "None", ")", ":", "from", "os", "import", "path", ",", "listdir", ",", "mkdir", "file_re", "...	39	19.833333
def more_cores(self, factor=1): """ Method to increase the number of MPI procs. Return: new number of processors if success, 0 if processors cannot be increased. """ # TODO : find a formula that works for all max_cores if self.max_cores > 40: base_increase = 4 *...	[ "def", "more_cores", "(", "self", ",", "factor", "=", "1", ")", ":", "# TODO : find a formula that works for all max_cores", "if", "self", ".", "max_cores", ">", "40", ":", "base_increase", "=", "4", "*", "int", "(", "self", ".", "max_cores", "/", "40", ")",...	35.722222	20.388889
def get_env_pass(self, user=None, msg=None, shutit_pexpect_child=None, note=None): """Gets a password from the user if one is not already recorded for this environment. @param user: username we are getting password for @param msg: mes...	[ "def", "get_env_pass", "(", "self", ",", "user", "=", "None", ",", "msg", "=", "None", ",", "shutit_pexpect_child", "=", "None", ",", "note", "=", "None", ")", ":", "shutit_global", ".", "shutit_global_object", ".", "yield_to_draw", "(", ")", "shutit_pexpect...	46.75	17.75
def callback_url(self, request): """ the url to go back after the external service call :param request: contains the current session :type request: dict :rtype: string """ service = self.service.split('Service')[1].lower() return_to = '{ser...	[ "def", "callback_url", "(", "self", ",", "request", ")", ":", "service", "=", "self", ".", "service", ".", "split", "(", "'Service'", ")", "[", "1", "]", ".", "lower", "(", ")", "return_to", "=", "'{service}_callback'", ".", "format", "(", "service", "...	43.6	15.6
def get(self, queue_name, task_id): """ Pops a specific task off the queue by identifier. :param queue_name: The name of the queue. Usually handled by the ``Gator`` instance. :type queue_name: string :param task_id: The identifier of the task. :type task_id:...	[ "def", "get", "(", "self", ",", "queue_name", ",", "task_id", ")", ":", "self", ".", "conn", ".", "lrem", "(", "queue_name", ",", "1", ",", "task_id", ")", "data", "=", "self", ".", "conn", ".", "get", "(", "task_id", ")", "if", "data", ":", "sel...	27.5	16.2
def renders_impl(self, template_content, context, at_paths=None, at_encoding=anytemplate.compat.ENCODING, **kwargs): """ Render given template string and return the result. :param template_content: Template content :param context: A dict or dict...	[ "def", "renders_impl", "(", "self", ",", "template_content", ",", "context", ",", "at_paths", "=", "None", ",", "at_encoding", "=", "anytemplate", ".", "compat", ".", "ENCODING", ",", "", "", "kwargs", ")", ":", "renderer", "=", "self", ".", "_make_rende...	40.75	18.85
def write(self, data, params=None, expected_response_code=204, protocol='json'): """Write data to InfluxDB. :param data: the data to be written :type data: (if protocol is 'json') dict (if protocol is 'line') sequence of line protocol strings ...	[ "def", "write", "(", "self", ",", "data", ",", "params", "=", "None", ",", "expected_response_code", "=", "204", ",", "protocol", "=", "'json'", ")", ":", "headers", "=", "self", ".", "_headers", "headers", "[", "'Content-Type'", "]", "=", "'application/oc...	35.333333	18.357143
def reset(self): """Request that host re-discovers plug-ins and re-processes selectors A reset completely flushes the state of the GUI and reverts back to how it was when it first got launched. Pipeline: ______________ ____________ ______________ \| ...	[ "def", "reset", "(", "self", ")", ":", "if", "not", "any", "(", "state", "in", "self", ".", "states", "for", "state", "in", "(", "\"ready\"", ",", "\"finished\"", ")", ")", ":", "return", "self", ".", "error", ".", "emit", "(", "\"Not ready\"", ")", ...	37.641379	21
def _get_default_arg(args, defaults, arg_index): """ Method that determines if an argument has default value or not, and if yes what is the default value for the argument :param args: array of arguments, eg: ['first_arg', 'second_arg', 'third_arg'] :param defaults: array of default values, eg: (42, 'so...	[ "def", "_get_default_arg", "(", "args", ",", "defaults", ",", "arg_index", ")", ":", "if", "not", "defaults", ":", "return", "DefaultArgSpec", "(", "False", ",", "None", ")", "args_with_no_defaults", "=", "len", "(", "args", ")", "-", "len", "(", "defaults...	45.208333	20.708333
def parse_output(self, s): ''' Example output: AVR Memory Usage ---------------- Device: atmega2561 Program: 4168 bytes (1.6% Full) (.text + .data + .bootloader) Data: 72 bytes (0.9% Full) (.data + .bss + .noinit) ''' ...	[ "def", "parse_output", "(", "self", ",", "s", ")", ":", "for", "x", "in", "s", ".", "splitlines", "(", ")", ":", "if", "'%'", "in", "x", ":", "name", "=", "x", ".", "split", "(", "':'", ")", "[", "0", "]", ".", "strip", "(", ")", ".", "lowe...	30.214286	16.071429
def readline_completer(self, text, state): """ A completer for the readline library """ if state == 0: # New completion, reset the list of matches and the display hook self._readline_matches = [] try: readline.set_completion_display_mat...	[ "def", "readline_completer", "(", "self", ",", "text", ",", "state", ")", ":", "if", "state", "==", "0", ":", "# New completion, reset the list of matches and the display hook", "self", ".", "_readline_matches", "=", "[", "]", "try", ":", "readline", ".", "set_com...	35.380952	16.028571
def disambiguate_url(url, location=None): """turn multi-ip interfaces '0.0.0.0' and '' into connectable ones, based on the location (default interpretation is localhost). This is for zeromq urls, such as tcp://:10101.""" try: proto,ip,port = split_url(url) except AssertionError: ...	[ "def", "disambiguate_url", "(", "url", ",", "location", "=", "None", ")", ":", "try", ":", "proto", ",", "ip", ",", "port", "=", "split_url", "(", "url", ")", "except", "AssertionError", ":", "# probably not tcp url; could be ipc, etc.", "return", "url", "ip",...	33.357143	16.071429
def reclassify(layer, exposure_key=None, overwrite_input=False): """Reclassify a continuous raster layer. Issue https://github.com/inasafe/inasafe/issues/3182 This function is a wrapper for the code from https://github.com/chiatt/gdal_reclassify For instance if you want to reclassify like this t...	[ "def", "reclassify", "(", "layer", ",", "exposure_key", "=", "None", ",", "overwrite_input", "=", "False", ")", ":", "output_layer_name", "=", "reclassify_raster_steps", "[", "'output_layer_name'", "]", "output_layer_name", "=", "output_layer_name", "%", "layer", "....	32.708661	20.291339
def create_aws_lambda(ctx, bucket, region_name, aws_access_key_id, aws_secret_access_key): """Creates an AWS Chalice project for deployment to AWS Lambda.""" from canari.commands.create_aws_lambda import create_aws_lambda create_aws_lambda(ctx.project, bucket, region_name, aws_access_key_id, aws_secret_acce...	[ "def", "create_aws_lambda", "(", "ctx", ",", "bucket", ",", "region_name", ",", "aws_access_key_id", ",", "aws_secret_access_key", ")", ":", "from", "canari", ".", "commands", ".", "create_aws_lambda", "import", "create_aws_lambda", "create_aws_lambda", "(", "ctx", ...	81	33.5
def create(self, resource): """Create a new config. :param resource: :class:`configs.Config <configs.Config>` object :return: :class:`configs.Config <configs.Config>` object :rtype: configs.Config """ schema = self.CREATE_SCHEMA json = self.service.encode(schema,...	[ "def", "create", "(", "self", ",", "resource", ")", ":", "schema", "=", "self", ".", "CREATE_SCHEMA", "json", "=", "self", ".", "service", ".", "encode", "(", "schema", ",", "resource", ")", "schema", "=", "self", ".", "GET_SCHEMA", "resp", "=", "self"...	34.846154	15.615385
def getPorts(self): """acquire ports to be used by the SC2 client launched by this process""" if self.ports: # no need to get ports if ports are al return self.ports if not self._gotPorts: self.ports = [ portpicker.pick_unused_port(), # game_port ...	[ "def", "getPorts", "(", "self", ")", ":", "if", "self", ".", "ports", ":", "# no need to get ports if ports are al", "return", "self", ".", "ports", "if", "not", "self", ".", "_gotPorts", ":", "self", ".", "ports", "=", "[", "portpicker", ".", "pick_unused_p...	42.083333	16.166667
def spd_eig(W, epsilon=1e-10, method='QR', canonical_signs=False): """ Rank-reduced eigenvalue decomposition of symmetric positive definite matrix. Removes all negligible eigenvalues Parameters ---------- W : ndarray((n, n), dtype=float) Symmetric positive-definite (spd) matrix. epsilo...	[ "def", "spd_eig", "(", "W", ",", "epsilon", "=", "1e-10", ",", "method", "=", "'QR'", ",", "canonical_signs", "=", "False", ")", ":", "# check input", "assert", "_np", ".", "allclose", "(", "W", ".", "T", ",", "W", ")", ",", "'W is not a symmetric matrix...	32.757576	22.560606
def put(self, path, value, timeout=None, event_timeout=None): """"Puts a value to a path and returns when it completes Args: path (list): The path to put to value (object): The value to set timeout (float): time in seconds to wait for responses, wait forever ...	[ "def", "put", "(", "self", ",", "path", ",", "value", ",", "timeout", "=", "None", ",", "event_timeout", "=", "None", ")", ":", "future", "=", "self", ".", "put_async", "(", "path", ",", "value", ")", "self", ".", "wait_all_futures", "(", "future", "...	38.444444	17.388889
def mark_offer_as_clear(self, offer_id): """ Mark offer as clear :param offer_id: the offer id :return Response """ return self._create_put_request( resource=OFFERS, billomat_id=offer_id, command=CLEAR, )	[ "def", "mark_offer_as_clear", "(", "self", ",", "offer_id", ")", ":", "return", "self", ".", "_create_put_request", "(", "resource", "=", "OFFERS", ",", "billomat_id", "=", "offer_id", ",", "command", "=", "CLEAR", ",", ")" ]	23.833333	11.333333
def clear_attributes(self): """ Remove the record_dict attribute from the object, as SeqRecords are not JSON-serializable. Also remove the contig_lengths and longest_contig attributes, as they are large lists that make the .json file ugly """ for sample in self.metadata: ...	[ "def", "clear_attributes", "(", "self", ")", ":", "for", "sample", "in", "self", ".", "metadata", ":", "try", ":", "delattr", "(", "sample", "[", "self", ".", "analysistype", "]", ",", "'record_dict'", ")", "delattr", "(", "sample", "[", "self", ".", "...	48.083333	24.083333
def is_child_of_repository(self, id_, repository_id): """Tests if a node is a direct child of another. arg: id (osid.id.Id): an ``Id`` arg: repository_id (osid.id.Id): the ``Id`` of a repository return: (boolean) - ``true`` if the ``id`` is a child of ``repository_...	[ "def", "is_child_of_repository", "(", "self", ",", "id_", ",", "repository_id", ")", ":", "# Implemented from template for", "# osid.resource.BinHierarchySession.is_child_of_bin", "if", "self", ".", "_catalog_session", "is", "not", "None", ":", "return", "self", ".", "_...	51.75	20.5
def _bind_as(self, bind_dn, bind_password, sticky=False): """ Binds to the LDAP server with the given credentials. This does not trap exceptions. If sticky is True, then we will consider the connection to be bound for the life of this object. If False, then the caller only wishe...	[ "def", "_bind_as", "(", "self", ",", "bind_dn", ",", "bind_password", ",", "sticky", "=", "False", ")", ":", "self", ".", "_get_connection", "(", ")", ".", "simple_bind_s", "(", "bind_dn", ",", "bind_password", ")", "self", ".", "_connection_bound", "=", "...	43.333333	25.166667
def maybe_dotted(module, throw=True): """ If ``module`` is a dotted string pointing to the module, imports and returns the module object. """ try: return Configurator().maybe_dotted(module) except ImportError as e: err = '%s not found. %s' % (module, e) if throw: ...	[ "def", "maybe_dotted", "(", "module", ",", "throw", "=", "True", ")", ":", "try", ":", "return", "Configurator", "(", ")", ".", "maybe_dotted", "(", "module", ")", "except", "ImportError", "as", "e", ":", "err", "=", "'%s not found. %s'", "%", "(", "modu...	30.384615	11.692308
def get_filepath_or_buffer(filepath_or_buffer, encoding=None, compression=None, mode=None): """ If the filepath_or_buffer is a url, translate and return the buffer. Otherwise passthrough. Parameters ---------- filepath_or_buffer : a url, filepath (str, py.path.local o...	[ "def", "get_filepath_or_buffer", "(", "filepath_or_buffer", ",", "encoding", "=", "None", ",", "compression", "=", "None", ",", "mode", "=", "None", ")", ":", "filepath_or_buffer", "=", "_stringify_path", "(", "filepath_or_buffer", ")", "if", "_is_url", "(", "fi...	38.636364	19.981818
def add(self, other): """Return the QuantumChannel self + other. Args: other (QuantumChannel): a quantum channel. Returns: SuperOp: the linear addition self + other as a SuperOp object. Raises: QiskitError: if other cannot be converted to a channel ...	[ "def", "add", "(", "self", ",", "other", ")", ":", "# Convert other to SuperOp", "if", "not", "isinstance", "(", "other", ",", "SuperOp", ")", ":", "other", "=", "SuperOp", "(", "other", ")", "if", "self", ".", "dim", "!=", "other", ".", "dim", ":", ...	34.6	18.95
def seriesshape(self): """Shape of the whole time series (time being the first dimension).""" seriesshape = [len(hydpy.pub.timegrids.init)] seriesshape.extend(self.shape) return tuple(seriesshape)	[ "def", "seriesshape", "(", "self", ")", ":", "seriesshape", "=", "[", "len", "(", "hydpy", ".", "pub", ".", "timegrids", ".", "init", ")", "]", "seriesshape", ".", "extend", "(", "self", ".", "shape", ")", "return", "tuple", "(", "seriesshape", ")" ]	44.8	8
def confusion_matrix(exp, obs): """Create a confusion matrix In each axis of the resulting confusion matrix the negative case is 0-index and the positive case 1-index. The labels get sorted, in a True/False scenario true positives will occur at (1,1). The first dimension (rows) of the resulting...	[ "def", "confusion_matrix", "(", "exp", ",", "obs", ")", ":", "assert", "len", "(", "exp", ")", "==", "len", "(", "obs", ")", "# Expected in the first dimension (0;rows), observed in the second (1;cols)", "lbls", "=", "sorted", "(", "set", "(", "exp", ")", ")", ...	39.909091	17.772727
def project_inspect_template_path(cls, project, inspect_template): """Return a fully-qualified project_inspect_template string.""" return google.api_core.path_template.expand( "projects/{project}/inspectTemplates/{inspect_template}", project=project, inspect_template=...	[ "def", "project_inspect_template_path", "(", "cls", ",", "project", ",", "inspect_template", ")", ":", "return", "google", ".", "api_core", ".", "path_template", ".", "expand", "(", "\"projects/{project}/inspectTemplates/{inspect_template}\"", ",", "project", "=", "proj...	48.714286	16.571429
def renormalize(self, modelparams): """ Renormalizes one or more states represented as model parameter vectors, such that each state has trace 1. :param np.ndarray modelparams: Array of shape ``(n_states, dim ** 2)`` representing one or more states as model para...	[ "def", "renormalize", "(", "self", ",", "modelparams", ")", ":", "# The 0th basis element (identity) should have", "# a value 1 / sqrt{dim}, since the trace of that basis", "# element is fixed to be sqrt{dim} by convention.", "norm", "=", "modelparams", "[", ":", ",", "0", "]", ...	43.6875	13.9375
def numericalize(self, t:Collection[str]) -> List[int]: "Convert a list of tokens `t` to their ids." return [self.stoi[w] for w in t]	[ "def", "numericalize", "(", "self", ",", "t", ":", "Collection", "[", "str", "]", ")", "->", "List", "[", "int", "]", ":", "return", "[", "self", ".", "stoi", "[", "w", "]", "for", "w", "in", "t", "]" ]	49	9
def _is_broken_ref(key1, value1, key2, value2): """True if this is a broken reference; False otherwise.""" # A link followed by a string may represent a broken reference if key1 != 'Link' or key2 != 'Str': return False # Assemble the parts n = 0 if _PANDOCVERSION < '1.16' else 1 if isin...	[ "def", "_is_broken_ref", "(", "key1", ",", "value1", ",", "key2", ",", "value2", ")", ":", "# A link followed by a string may represent a broken reference", "if", "key1", "!=", "'Link'", "or", "key2", "!=", "'Str'", ":", "return", "False", "# Assemble the parts", "n...	37.9375	14.5625
def animate_cycle(self, colors, groups=('LEFT', 'RIGHT'), sleeptime=0.5, duration=5, block=True): """ Cycle ``groups`` LEDs through ``colors``. Do this in a loop where we display each color for ``sleeptime`` seconds. Animate for ``duration`` seconds. If ``duration`` is None animate for...	[ "def", "animate_cycle", "(", "self", ",", "colors", ",", "groups", "=", "(", "'LEFT'", ",", "'RIGHT'", ")", ",", "sleeptime", "=", "0.5", ",", "duration", "=", "5", ",", "block", "=", "True", ")", ":", "def", "_animate_cycle", "(", ")", ":", "index",...	28.627907	23
def _ignore_comments(lines_enum): """ Strips comments and filter empty lines. """ for line_number, line in lines_enum: line = COMMENT_RE.sub('', line) line = line.strip() if line: yield line_number, line	[ "def", "_ignore_comments", "(", "lines_enum", ")", ":", "for", "line_number", ",", "line", "in", "lines_enum", ":", "line", "=", "COMMENT_RE", ".", "sub", "(", "''", ",", "line", ")", "line", "=", "line", ".", "strip", "(", ")", "if", "line", ":", "y...	27.444444	5.888889
def variance_increase_distance(cluster1, cluster2, data = None): """! @brief Calculates variance increase distance between two clusters. @details Clusters can be represented by list of coordinates (in this case data shouldn't be specified), or by list of indexes of points from the data (rep...	[ "def", "variance_increase_distance", "(", "cluster1", ",", "cluster2", ",", "data", "=", "None", ")", ":", "# calculate local sum\r", "if", "data", "is", "None", ":", "member_cluster1", "=", "[", "0.0", "]", "*", "len", "(", "cluster1", "[", "0", "]", ")",...	45.059701	30.089552
def options_handler(self, sock, cmd, opt): "Negotiate options" if cmd == NOP: self.sendcommand(NOP) elif cmd == WILL or cmd == WONT: if self.WILLACK.has_key(opt): self.sendcommand(self.WILLACK[opt], opt) else: self.sendcommand(D...	[ "def", "options_handler", "(", "self", ",", "sock", ",", "cmd", ",", "opt", ")", ":", "if", "cmd", "==", "NOP", ":", "self", ".", "sendcommand", "(", "NOP", ")", "elif", "cmd", "==", "WILL", "or", "cmd", "==", "WONT", ":", "if", "self", ".", "WIL...	37.032258	11.677419
def get_objects_in_sequence(brain_or_object, ctype, cref): """Return a list of items """ obj = api.get_object(brain_or_object) if ctype == "backreference": return get_backreferences(obj, cref) if ctype == "contained": return get_contained_items(obj, cref) raise ValueError("Refere...	[ "def", "get_objects_in_sequence", "(", "brain_or_object", ",", "ctype", ",", "cref", ")", ":", "obj", "=", "api", ".", "get_object", "(", "brain_or_object", ")", "if", "ctype", "==", "\"backreference\"", ":", "return", "get_backreferences", "(", "obj", ",", "c...	40.222222	9.555556
def does_not_raise(self, function, args, kwargs): """ Check if a function does not raise an exception, args and *kwargs are forwarded to the function """ try: return function(args, **kwargs) except Exception as e: self.log_error("{} d...	[ "def", "does_not_raise", "(", "self", ",", "function", ",", "", "args", ",", "", "", "kwargs", ")", ":", "try", ":", "return", "function", "(", "", "args", ",", "", "", "kwargs", ")", "except", "Exception", "as", "e", ":", "self", ".", "log_e...	35.416667	11.75
def posthoc_tamhane(a, val_col=None, group_col=None, welch=True, sort=False): '''Tamhane's T2 all-pairs comparison test for normally distributed data with unequal variances. Tamhane's T2 test can be performed for all-pairs comparisons in an one-factorial layout with normally distributed residuals but u...	[ "def", "posthoc_tamhane", "(", "a", ",", "val_col", "=", "None", ",", "group_col", "=", "None", ",", "welch", "=", "True", ",", "sort", "=", "False", ")", ":", "x", ",", "_val_col", ",", "_group_col", "=", "__convert_to_df", "(", "a", ",", "val_col", ...	38.302752	29.220183
def allocate_observation_matrix(self): """! @brief Allocates observation matrix in line with output dynamic of the network. @details Matrix where state of each neuron is denoted by zero/one in line with Heaviside function on each iteration. @return (list) Observation matrix...	[ "def", "allocate_observation_matrix", "(", "self", ")", ":", "number_neurons", "=", "len", "(", "self", ".", "output", "[", "0", "]", ")", "observation_matrix", "=", "[", "]", "for", "iteration", "in", "range", "(", "len", "(", "self", ".", "output", ")"...	41.526316	22.526316
def from_passphrase(cls, passphrase=None): """ Create keypair from a passphrase input (a brain wallet keypair).""" if not passphrase: # run a rejection sampling algorithm to ensure the private key is # less than the curve order while True: passphrase =...	[ "def", "from_passphrase", "(", "cls", ",", "passphrase", "=", "None", ")", ":", "if", "not", "passphrase", ":", "# run a rejection sampling algorithm to ensure the private key is", "# less than the curve order", "while", "True", ":", "passphrase", "=", "create_passphrase", ...	46.333333	19.055556
def normalize_files(files, separators=None): """ Normalizes the file paths to use the POSIX path separator. files (:class:`~collections.abc.Iterable` of :class:`str`) contains the file paths to be normalized. separators (:class:`~collections.abc.Collection` of :class:`str`; or :data:`None`) optionally conta...	[ "def", "normalize_files", "(", "files", ",", "separators", "=", "None", ")", ":", "norm_files", "=", "{", "}", "for", "path", "in", "files", ":", "norm_files", "[", "normalize_file", "(", "path", ",", "separators", "=", "separators", ")", "]", "=", "path...	35.388889	20.944444
def configure( cls, impl: "Union[None, str, Type[Configurable]]", **kwargs: Any ) -> None: """Configures the `AsyncHTTPClient` subclass to use. ``AsyncHTTPClient()`` actually creates an instance of a subclass. This method may be called with either a class object or the fully...	[ "def", "configure", "(", "cls", ",", "impl", ":", "\"Union[None, str, Type[Configurable]]\"", ",", "", "", "kwargs", ":", "Any", ")", "->", "None", ":", "super", "(", "AsyncHTTPClient", ",", "cls", ")", ".", "configure", "(", "impl", ",", "", "", "kw...	45.318182	27.636364
def _geoid_radius(latitude: float) -> float: """Calculates the GEOID radius at a given latitude Parameters ---------- latitude : float Latitude (degrees) Returns ------- R : float GEOID Radius (meters) """ lat = deg2rad(latitude) return sqrt(1/(cos(lat) ** 2 / R...	[ "def", "_geoid_radius", "(", "latitude", ":", "float", ")", "->", "float", ":", "lat", "=", "deg2rad", "(", "latitude", ")", "return", "sqrt", "(", "1", "/", "(", "cos", "(", "lat", ")", "", "2", "/", "Rmax_WGS84", "", "2", "+", "sin", "(", "...	23.733333	21.666667
def get_change_type(self, ref, a1, a2): """ Given ref, allele1, and allele2, returns the type of change. The only case of an amino acid insertion is when the ref is represented as a '.'. """ if ref == '.': return self.INSERTION elif a1 == '.' or a2 == ...	[ "def", "get_change_type", "(", "self", ",", "ref", ",", "a1", ",", "a2", ")", ":", "if", "ref", "==", "'.'", ":", "return", "self", ".", "INSERTION", "elif", "a1", "==", "'.'", "or", "a2", "==", "'.'", ":", "return", "self", ".", "DELETION" ]	34.8	10.4
def get_most_recent_event(self, originator_id, lt=None, lte=None): """ Gets a domain event from the sequence identified by `originator_id` at the highest position. :param originator_id: ID of a sequence of events :param lt: get highest before this position :param lte: ge...	[ "def", "get_most_recent_event", "(", "self", ",", "originator_id", ",", "lt", "=", "None", ",", "lte", "=", "None", ")", ":", "events", "=", "self", ".", "get_domain_events", "(", "originator_id", "=", "originator_id", ",", "lt", "=", "lt", ",", "lte", "...	38.3125	20.4375
def get_tables_and_gsis(): """ Get a set of tables and gsis and their configuration keys :returns: set -- A set of tuples (table_name, table_conf_key) """ table_names = set() configured_tables = get_configured_tables() not_used_tables = set(configured_tables) # Add regexp table names f...	[ "def", "get_tables_and_gsis", "(", ")", ":", "table_names", "=", "set", "(", ")", "configured_tables", "=", "get_configured_tables", "(", ")", "not_used_tables", "=", "set", "(", "configured_tables", ")", "# Add regexp table names", "for", "table_instance", "in", "l...	41.044444	19.4
def handle_input(self, ncode, wparam, lparam): """Process the key input.""" x_pos = lparam.contents.x_pos y_pos = lparam.contents.y_pos data = lparam.contents.mousedata # This is how we can distinguish mouse 1 from mouse 2 # extrainfo = lparam.contents.extrainfo ...	[ "def", "handle_input", "(", "self", ",", "ncode", ",", "wparam", ",", "lparam", ")", ":", "x_pos", "=", "lparam", ".", "contents", ".", "x_pos", "y_pos", "=", "lparam", ".", "contents", ".", "y_pos", "data", "=", "lparam", ".", "contents", ".", "moused...	39.545455	16.727273
def loadByteArray(self, page, returnError): """Must be overridden. Must return a string with the loaded data.""" returnError.contents.value = self.IllegalStateError raise NotImplementedError("You must override this method.") return ''	[ "def", "loadByteArray", "(", "self", ",", "page", ",", "returnError", ")", ":", "returnError", ".", "contents", ".", "value", "=", "self", ".", "IllegalStateError", "raise", "NotImplementedError", "(", "\"You must override this method.\"", ")", "return", "''" ]	52.4	14.4
def add(name, function_name, cron): """ Create an event """ lambder.add_event(name=name, function_name=function_name, cron=cron)	[ "def", "add", "(", "name", ",", "function_name", ",", "cron", ")", ":", "lambder", ".", "add_event", "(", "name", "=", "name", ",", "function_name", "=", "function_name", ",", "cron", "=", "cron", ")" ]	44.666667	12.333333
def find_by_typename(self, typename): """ List of all objects whose type has the given name. """ return self.find_by(lambda obj: type(obj).__name__ == typename)	[ "def", "find_by_typename", "(", "self", ",", "typename", ")", ":", "return", "self", ".", "find_by", "(", "lambda", "obj", ":", "type", "(", "obj", ")", ".", "__name__", "==", "typename", ")" ]	37.6	10.4
def filter_by(lookup_dict, grain='os_family', merge=None, default='default', base=None): ''' .. versionadded:: 0.17.0 Look up the given grain in a given dictionary for the current OS and return the result Although this may occasionally be useful at the CLI, the primary intent of this function ...	[ "def", "filter_by", "(", "lookup_dict", ",", "grain", "=", "'os_family'", ",", "merge", "=", "None", ",", "default", "=", "'default'", ",", "base", "=", "None", ")", ":", "return", "salt", ".", "utils", ".", "data", ".", "filter_by", "(", "lookup_dict", ...	39.899083	28.743119
def _apply_postprocessing(marc_xml, xml, func, uuid, url): """ Apply `func` to all ``<mods:mods>`` tags from `xml`. Insert UUID. Args: marc_xml (str): Original Aleph record. xml (str): XML which will be postprocessed. func (fn): Function, which will be used for postprocessing. ...	[ "def", "_apply_postprocessing", "(", "marc_xml", ",", "xml", ",", "func", ",", "uuid", ",", "url", ")", ":", "dom", "=", "dhtmlparser", ".", "parseString", "(", "xml", ")", "return", "[", "func", "(", "marc_xml", ",", "mods_tag", ",", "uuid", ",", "cnt...	32.9	20.6
def ylim(self, low, high, index=1): """Set yaxis limits. Parameters ---------- low : number high : number index : int, optional Returns ------- Chart """ self.layout['yaxis' + str(index)]['range'] = [low, high] return sel...	[ "def", "ylim", "(", "self", ",", "low", ",", "high", ",", "index", "=", "1", ")", ":", "self", ".", "layout", "[", "'yaxis'", "+", "str", "(", "index", ")", "]", "[", "'range'", "]", "=", "[", "low", ",", "high", "]", "return", "self" ]	19.125	21.3125
def add_section(self, section): """Add a new Section object to the config. Should be a subclass of _AbstractSection.""" if not issubclass(section.__class__, _AbstractSection): raise TypeError("argument should be a subclass of Section") self.sections[section.get_key_name()] = ...	[ "def", "add_section", "(", "self", ",", "section", ")", ":", "if", "not", "issubclass", "(", "section", ".", "__class__", ",", "_AbstractSection", ")", ":", "raise", "TypeError", "(", "\"argument should be a subclass of Section\"", ")", "self", ".", "sections", ...	49.142857	13.714286
def parse_atoms(self, pdb): """Parse the ATOM entries into the object""" atomre = re.compile("ATOM") atomlines = [line for line in pdb.lines if atomre.match(line)] chainresnums = {} for line in atomlines: chain = line[21] resname = line[17:20] resnum = line[22:2...	[ "def", "parse_atoms", "(", "self", ",", "pdb", ")", ":", "atomre", "=", "re", ".", "compile", "(", "\"ATOM\"", ")", "atomlines", "=", "[", "line", "for", "line", "in", "pdb", ".", "lines", "if", "atomre", ".", "match", "(", "line", ")", "]", "chain...	26.56	18.48
def _trigger_event(self, event, args, kwargs): """Invoke an event handler.""" run_async = kwargs.pop('run_async', False) if event in self.handlers: if run_async: return self.start_background_task(self.handlers[event], args) else: try: ...	[ "def", "_trigger_event", "(", "self", ",", "event", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "run_async", "=", "kwargs", ".", "pop", "(", "'run_async'", ",", "False", ")", "if", "event", "in", "self", ".", "handlers", ":", "if", "run_asyn...	41.363636	16.272727
def parse_declaration_expressn_arrayliteral(self, values, es): """ Same in python. Just a square bracket enclosed array. :param values: :param es: :return: """ es = es + '[' for ast in values: es = es + self.parse_declaration_expressn(ast, es...	[ "def", "parse_declaration_expressn_arrayliteral", "(", "self", ",", "values", ",", "es", ")", ":", "es", "=", "es", "+", "'['", "for", "ast", "in", "values", ":", "es", "=", "es", "+", "self", ".", "parse_declaration_expressn", "(", "ast", ",", "es", "="...	28.357143	18.357143
def getPrefilter(self,chn): """ Returns the prefilter of signal chn ("HP:0.1Hz", "LP:75Hz N:50Hz", etc.) Parameters ---------- chn : int channel number Examples -------- >>> import pyedflib >>> f = pyedflib.data.test_generator() ...	[ "def", "getPrefilter", "(", "self", ",", "chn", ")", ":", "if", "0", "<=", "chn", "<", "self", ".", "signals_in_file", ":", "return", "self", ".", "_convert_string", "(", "self", ".", "prefilter", "(", "chn", ")", ".", "rstrip", "(", ")", ")", "else"...	24.565217	19.956522
def _update_loaded_modules(self): """ Updates the loaded modules by checking if they are still in sys.modules """ system_modules = sys.modules.keys() for module in list(self.loaded_modules): if module not in system_modules: self.processed_filepaths.pop...	[ "def", "_update_loaded_modules", "(", "self", ")", ":", "system_modules", "=", "sys", ".", "modules", ".", "keys", "(", ")", "for", "module", "in", "list", "(", "self", ".", "loaded_modules", ")", ":", "if", "module", "not", "in", "system_modules", ":", ...	41.222222	9.222222
def _get_api_dependencies_of(name, version='', force=False): '''Returns list of first level dependencies of the given dap from Dapi''' m, d = _get_metadap_dap(name, version=version) # We need the dependencies to install the dap, # if the dap is unsupported, raise an exception here if not force and n...	[ "def", "_get_api_dependencies_of", "(", "name", ",", "version", "=", "''", ",", "force", "=", "False", ")", ":", "m", ",", "d", "=", "_get_metadap_dap", "(", "name", ",", "version", "=", "version", ")", "# We need the dependencies to install the dap,", "# if the...	52	18
def location_history(self, **params): """ Method for `Read Device Location History <https://m2x.att.com/developer/documentation/v2/device#Read-Device-Location-History>`_ endpoint. :param params: Query parameters passed as keyword arguments. View M2X API Docs for listing of available parameters. ...	[ "def", "location_history", "(", "self", ",", "", "", "params", ")", ":", "return", "self", ".", "api", ".", "get", "(", "self", ".", "subpath", "(", "'/location/waypoints'", ")", ",", "params", "=", "params", ")" ]	51.909091	30.636364
def find_connected_resources(resource, dependency_graph=None): """ Collects all resources connected to the given resource and returns a dictionary mapping member resource classes to new collections containing the members found. """ # Build a resource_graph. resource_graph = \ ...	[ "def", "find_connected_resources", "(", "resource", ",", "dependency_graph", "=", "None", ")", ":", "# Build a resource_graph.", "resource_graph", "=", "build_resource_graph", "(", "resource", ",", "dependency_graph", "=", "dependency_graph", ")", "entity_map", "=", "Or...	37.210526	13.736842
def detect_traits(item): """ Build traits list from attributes of the passed item. Currently, "kind_51", "name" and "alias" are considered. See pyrocore.util.traits:dectect_traits for more details. """ return traits.detect_traits( name=item.name, alias=item.alias, filetype=(...	[ "def", "detect_traits", "(", "item", ")", ":", "return", "traits", ".", "detect_traits", "(", "name", "=", "item", ".", "name", ",", "alias", "=", "item", ".", "alias", ",", "filetype", "=", "(", "list", "(", "item", ".", "fetch", "(", "\"kind_51\"", ...	36.2	16.1
def is_local_import_from(node, package_name): """Check if a node is an import from the local package. :param node: The node to check. :type node: astroid.node.NodeNG :param package_name: The name of the local package. :type package_name: str :returns: True if the node is an import from the lo...	[ "def", "is_local_import_from", "(", "node", ",", "package_name", ")", ":", "if", "not", "isinstance", "(", "node", ",", "astroid", ".", "ImportFrom", ")", ":", "return", "False", "return", "(", "node", ".", "level", "or", "node", ".", "modname", "==", "p...	26.952381	18.952381
def optimize(qs, info_dict, field_map): """Add either select_related or prefetch_related to fields of the qs""" fields = collect_fields(info_dict) for field in fields: if field in field_map: field_name, opt = field_map[field] qs = (qs.prefetch_related(field_name) ...	[ "def", "optimize", "(", "qs", ",", "info_dict", ",", "field_map", ")", ":", "fields", "=", "collect_fields", "(", "info_dict", ")", "for", "field", "in", "fields", ":", "if", "field", "in", "field_map", ":", "field_name", ",", "opt", "=", "field_map", "[...	38.8	14.5
def validate(self, ip, **kwargs): """Check to see if this is a valid ip address.""" if ip is None: return False ip = stringify(ip) if self.IPV4_REGEX.match(ip): try: socket.inet_pton(socket.AF_INET, ip) return True ...	[ "def", "validate", "(", "self", ",", "ip", ",", "", "", "kwargs", ")", ":", "if", "ip", "is", "None", ":", "return", "False", "ip", "=", "stringify", "(", "ip", ")", "if", "self", ".", "IPV4_REGEX", ".", "match", "(", "ip", ")", ":", "try", "...	29.571429	16.607143

def input_file(self, _container): """Find the input path of a uchroot container.""" p = local.path(_container) if set_input_container(p, CFG): return p = find_hash(CFG["container"]["known"].value, container) if set_input_container(p, CFG): return ...

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def ip_rtm_config_route_static_route_nh_vrf_static_route_next_hop(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") ip = ET.SubElement(config, "ip", xmlns="urn:brocade.com:mgmt:brocade-common-def") rtm_config = ET.SubElement(ip, "rtm-config", xmlns="urn:br...

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def get_markdown_files(self, dir_): """ Get all the markdown files in a folder, recursively Args: dir_: str, a toplevel folder to walk. """ md_files = OrderedSet() for root, _, files in os.walk(dir_): for name in files: split = os....

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def proj_path(*path_parts): # type: (str) -> str """ Return absolute path to the repo dir (root project directory). Args: path (str): The path relative to the project root (pelconf.yaml). Returns: str: The given path converted to an absolute path. """ path_parts = p...

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def _update_axes_color(self, color): """Internal helper to set the axes label color""" prop_x = self.axes_actor.GetXAxisCaptionActor2D().GetCaptionTextProperty() prop_y = self.axes_actor.GetYAxisCaptionActor2D().GetCaptionTextProperty() prop_z = self.axes_actor.GetZAxisCaptionActor2D().G...

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def make_published(self, request, queryset): """ Bulk action to mark selected posts as published. If the date_published field is empty the current time is saved as date_published. queryset must not be empty (ensured by DjangoCMS). """ cnt1 = queryset.filter( ...

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def get_slot(self): """ Get the slot position of this pair. """ corner, edge = self.get_pair() corner_slot, edge_slot = corner.location.replace("D", "", 1), edge.location if "U" not in corner_slot and corner_slot not in ["FR", "RB", "BL", "LF"]: corner_slot = ...

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def enable_nvm(): '''add to ~/.bashrc: Export of $NVM env variable and load nvm command.''' bash_snippet = '~/.bashrc_nvm' install_file_legacy(path=bash_snippet) prefix = flo('if [ -f {bash_snippet} ]; ') enabler = flo('if [ -f {bash_snippet} ]; then source {bash_snippet}; fi') if env.host == '...

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def process_summary(article): """Ensures summaries are not cut off. Also inserts mathjax script so that math will be rendered""" summary = article.summary summary_parsed = BeautifulSoup(summary, 'html.parser') math = summary_parsed.find_all(class_='math') if len(math) > 0: last_math_te...

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def _create_variables(self, n_features, W_=None, bh_=None, bv_=None): """Create the TensorFlow variables for the model. :return: self """ if W_: self.W_ = tf.Variable(W_, name='enc-w') else: self.W_ = tf.Variable( tf.truncated_normal( ...

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def poke(self, session, address, width, data): """Writes an 8, 16, 32, or 64-bit value from the specified address. Corresponds to viPoke* functions of the VISA library. :param session: Unique logical identifier to a session. :param address: Source address to read the value. :pa...

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def partition_source(src): """Partitions source into a list of `CodePartition`s for import refactoring. """ # In python2, ast.parse(text_string_with_encoding_pragma) raises # SyntaxError: encoding declaration in Unicode string ast_obj = ast.parse(src.encode('UTF-8')) visitor = TopLevelImport...

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def port_policy_present(name, sel_type, protocol=None, port=None, sel_range=None): ''' .. versionadded:: 2019.2.0 Makes sure an SELinux port policy for a given port, protocol and SELinux context type is present. name The protocol and port spec. Can be formatted as ``(tcp|udp)/(port|port-range)...

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def _process_sasl_challenge(self, stream, element): """Process incoming <sasl:challenge/> element. [initiating entity only] """ if not self.authenticator: logger.debug("Unexpected SASL challenge") return False content = element.text.encode("us-ascii") ...

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def GetHasherClasses(cls, hasher_names=None): """Retrieves the registered hashers. Args: hasher_names (list[str]): names of the hashers to retrieve. Yields: tuple: containing: str: parser name type: next hasher class. """ for hasher_name, hasher_class in iter(cls._...

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def index(ctx, view): """Index the database.""" adapter = ctx.obj['adapter'] if view: click.echo(adapter.indexes()) return adapter.ensure_indexes()

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def _determine_os_workload_status( configs, required_interfaces, charm_func=None, services=None, ports=None): """Determine the state of the workload status for the charm. This function returns the new workload status for the charm based on the state of the interfaces, the paused state and w...

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def status_human(self): """ Human readable status :return: * `DOWNLOADING`: the task is downloading files * `BEING TRANSFERRED`: the task is being transferred * `TRANSFERRED`: the task has been transferred to downloads \ directory ...

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def mean_abs(self): """return the median of absolute values""" # XXX rename this method if len(self.values) > 0: return sorted(map(abs, self.values))[len(self.values) / 2] else: return None

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def bitfieldify(buff, count): """Extract a bitarray out of a bytes array. Some hardware devices read from the LSB to the MSB, but the bit types available prefer to put pad bits on the LSB side, completely changing the data. This function takes in bytes and the number of bits to extract starting from t...

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def namedb_get_all_namespace_ids( cur ): """ Get a list of all READY namespace IDs. """ query = "SELECT namespace_id FROM namespaces WHERE op = ?;" args = (NAMESPACE_READY,) namespace_rows = namedb_query_execute( cur, query, args ) ret = [] for namespace_row in namespace_rows: ...

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def _add_transaction_to_canonical_chain(db: BaseDB, transaction_hash: Hash32, block_header: BlockHeader, index: int) -> None: """ :param bytes transaction_hash: the hash of...

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def node_type(node: astroid.node_classes.NodeNG) -> Optional[type]: """Return the inferred type for `node` If there is more than one possible type, or if inferred type is Uninferable or None, return None """ # check there is only one possible type for the assign node. Else we # don't handle it ...

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def print(self, txt: str, hold: bool=False) -> None: """ Conditionally print txt :param txt: text to print :param hold: If true, hang on to the text until another print comes through :param hold: If true, drop both print statements if another hasn't intervened :return: "...

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def set_cursor_enter_callback(window, cbfun): """ Sets the cursor enter/exit callback. Wrapper for: GLFWcursorenterfun glfwSetCursorEnterCallback(GLFWwindow* window, GLFWcursorenterfun cbfun); """ window_addr = ctypes.cast(ctypes.pointer(window), ctypes.POINTER...

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def InternalRecv(self): """Receives a message from the device, including defragmenting it.""" first_read = self.InternalReadFrame() first_packet = UsbHidTransport.InitPacket.FromWireFormat(self.packet_size, first_read) data = first_packet.pay...

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def set_host(ip, alias): ''' Set the host entry in the hosts file for the given ip, this will overwrite any previous entry for the given ip .. versionchanged:: 2016.3.0 If ``alias`` does not include any host names (it is the empty string or contains only whitespace), all entries for the...

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def strainer(self): """ Determine whether it is required to run the MLST analyses """ # Initialise a variable to store whether the analyses need to be performed analyse = list() for sample in self.runmetadata.samples: if sample.general.bestassemblyfile != 'NA'...

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def _get_dacl(path, objectType): ''' Gets the DACL of a path ''' try: dacl = win32security.GetNamedSecurityInfo( path, objectType, win32security.DACL_SECURITY_INFORMATION ).GetSecurityDescriptorDacl() except Exception: dacl = None return dacl

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def dict_array_bytes_required(arrays, template): """ Return the number of bytes required by a dictionary of arrays. Arguments --------------- arrays : list A list of dictionaries defining the arrays template : dict A dictionary of key-values, used to replace any stri...

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def collides(self, other): """Returns collision with axis aligned rect""" angle = self.angle width = self.width height = self.height if angle == 0: return other.collides(Rect(-0.5 * width, -0.5 * height, width, height)) ...

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def calibration_plot(self, analytes=None, datarange=True, loglog=False, ncol=3, srm_group=None, save=True): """ Plot the calibration lines between measured and known SRM values. Parameters ---------- analytes : optional, array_like or str The analyte(s) to plot. Defaults to all analytes. ...

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def append_json( self, obj: Any, headers: Optional['MultiMapping[str]']=None ) -> Payload: """Helper to append JSON part.""" if headers is None: headers = CIMultiDict() return self.append_payload(JsonPayload(obj, headers=headers))

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def add_indices(self, indices, distance_matrix): '''Adds extra indices for the combinatorial problem. Arguments --------- indices : tuple distance_matrix : numpy.ndarray (M,M) Example ------- >>> add_indices((1,2), numpy.array((5,5))) [(1, 2, 3),...

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def compile_dir(env, src_path, dst_path, pattern=r'^.*\.html$', encoding='utf-8', base_dir=None): """Compiles a directory of Jinja2 templates to python code. :param env: a Jinja2 Environment instance. :param src_path: path to the source directory. :param dst_path: path to the destination directory. :param ...

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def more_cores(self, factor=1): """ Method to increase the number of MPI procs. Return: new number of processors if success, 0 if processors cannot be increased. """ # TODO : find a formula that works for all max_cores if self.max_cores > 40: base_increase = 4 *...

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def get_env_pass(self, user=None, msg=None, shutit_pexpect_child=None, note=None): """Gets a password from the user if one is not already recorded for this environment. @param user: username we are getting password for @param msg: mes...

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def callback_url(self, request): """ the url to go back after the external service call :param request: contains the current session :type request: dict :rtype: string """ service = self.service.split('Service')[1].lower() return_to = '{ser...

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def get(self, queue_name, task_id): """ Pops a specific task off the queue by identifier. :param queue_name: The name of the queue. Usually handled by the ``Gator`` instance. :type queue_name: string :param task_id: The identifier of the task. :type task_id:...

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def renders_impl(self, template_content, context, at_paths=None, at_encoding=anytemplate.compat.ENCODING, **kwargs): """ Render given template string and return the result. :param template_content: Template content :param context: A dict or dict...

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def write(self, data, params=None, expected_response_code=204, protocol='json'): """Write data to InfluxDB. :param data: the data to be written :type data: (if protocol is 'json') dict (if protocol is 'line') sequence of line protocol strings ...

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def reset(self): """Request that host re-discovers plug-ins and re-processes selectors A reset completely flushes the state of the GUI and reverts back to how it was when it first got launched. Pipeline: ______________ ____________ ______________ | ...

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def _get_default_arg(args, defaults, arg_index): """ Method that determines if an argument has default value or not, and if yes what is the default value for the argument :param args: array of arguments, eg: ['first_arg', 'second_arg', 'third_arg'] :param defaults: array of default values, eg: (42, 'so...

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def parse_output(self, s): ''' Example output: AVR Memory Usage ---------------- Device: atmega2561 Program: 4168 bytes (1.6% Full) (.text + .data + .bootloader) Data: 72 bytes (0.9% Full) (.data + .bss + .noinit) ''' ...

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def readline_completer(self, text, state): """ A completer for the readline library """ if state == 0: # New completion, reset the list of matches and the display hook self._readline_matches = [] try: readline.set_completion_display_mat...

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def disambiguate_url(url, location=None): """turn multi-ip interfaces '0.0.0.0' and '*' into connectable ones, based on the location (default interpretation is localhost). This is for zeromq urls, such as tcp://*:10101.""" try: proto,ip,port = split_url(url) except AssertionError: ...

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def reclassify(layer, exposure_key=None, overwrite_input=False): """Reclassify a continuous raster layer. Issue https://github.com/inasafe/inasafe/issues/3182 This function is a wrapper for the code from https://github.com/chiatt/gdal_reclassify For instance if you want to reclassify like this t...

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def create_aws_lambda(ctx, bucket, region_name, aws_access_key_id, aws_secret_access_key): """Creates an AWS Chalice project for deployment to AWS Lambda.""" from canari.commands.create_aws_lambda import create_aws_lambda create_aws_lambda(ctx.project, bucket, region_name, aws_access_key_id, aws_secret_acce...

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def create(self, resource): """Create a new config. :param resource: :class:`configs.Config <configs.Config>` object :return: :class:`configs.Config <configs.Config>` object :rtype: configs.Config """ schema = self.CREATE_SCHEMA json = self.service.encode(schema,...

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def getPorts(self): """acquire ports to be used by the SC2 client launched by this process""" if self.ports: # no need to get ports if ports are al return self.ports if not self._gotPorts: self.ports = [ portpicker.pick_unused_port(), # game_port ...

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def spd_eig(W, epsilon=1e-10, method='QR', canonical_signs=False): """ Rank-reduced eigenvalue decomposition of symmetric positive definite matrix. Removes all negligible eigenvalues Parameters ---------- W : ndarray((n, n), dtype=float) Symmetric positive-definite (spd) matrix. epsilo...

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def put(self, path, value, timeout=None, event_timeout=None): """"Puts a value to a path and returns when it completes Args: path (list): The path to put to value (object): The value to set timeout (float): time in seconds to wait for responses, wait forever ...

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def mark_offer_as_clear(self, offer_id): """ Mark offer as clear :param offer_id: the offer id :return Response """ return self._create_put_request( resource=OFFERS, billomat_id=offer_id, command=CLEAR, )

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def clear_attributes(self): """ Remove the record_dict attribute from the object, as SeqRecords are not JSON-serializable. Also remove the contig_lengths and longest_contig attributes, as they are large lists that make the .json file ugly """ for sample in self.metadata: ...

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def is_child_of_repository(self, id_, repository_id): """Tests if a node is a direct child of another. arg: id (osid.id.Id): an ``Id`` arg: repository_id (osid.id.Id): the ``Id`` of a repository return: (boolean) - ``true`` if the ``id`` is a child of ``repository_...

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def _bind_as(self, bind_dn, bind_password, sticky=False): """ Binds to the LDAP server with the given credentials. This does not trap exceptions. If sticky is True, then we will consider the connection to be bound for the life of this object. If False, then the caller only wishe...

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def maybe_dotted(module, throw=True): """ If ``module`` is a dotted string pointing to the module, imports and returns the module object. """ try: return Configurator().maybe_dotted(module) except ImportError as e: err = '%s not found. %s' % (module, e) if throw: ...

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def get_filepath_or_buffer(filepath_or_buffer, encoding=None, compression=None, mode=None): """ If the filepath_or_buffer is a url, translate and return the buffer. Otherwise passthrough. Parameters ---------- filepath_or_buffer : a url, filepath (str, py.path.local o...

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def add(self, other): """Return the QuantumChannel self + other. Args: other (QuantumChannel): a quantum channel. Returns: SuperOp: the linear addition self + other as a SuperOp object. Raises: QiskitError: if other cannot be converted to a channel ...

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def seriesshape(self): """Shape of the whole time series (time being the first dimension).""" seriesshape = [len(hydpy.pub.timegrids.init)] seriesshape.extend(self.shape) return tuple(seriesshape)

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def confusion_matrix(exp, obs): """Create a confusion matrix In each axis of the resulting confusion matrix the negative case is 0-index and the positive case 1-index. The labels get sorted, in a True/False scenario true positives will occur at (1,1). The first dimension (rows) of the resulting...

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def project_inspect_template_path(cls, project, inspect_template): """Return a fully-qualified project_inspect_template string.""" return google.api_core.path_template.expand( "projects/{project}/inspectTemplates/{inspect_template}", project=project, inspect_template=...

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def renormalize(self, modelparams): """ Renormalizes one or more states represented as model parameter vectors, such that each state has trace 1. :param np.ndarray modelparams: Array of shape ``(n_states, dim ** 2)`` representing one or more states as model para...

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def numericalize(self, t:Collection[str]) -> List[int]: "Convert a list of tokens `t` to their ids." return [self.stoi[w] for w in t]

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def _is_broken_ref(key1, value1, key2, value2): """True if this is a broken reference; False otherwise.""" # A link followed by a string may represent a broken reference if key1 != 'Link' or key2 != 'Str': return False # Assemble the parts n = 0 if _PANDOCVERSION < '1.16' else 1 if isin...

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def animate_cycle(self, colors, groups=('LEFT', 'RIGHT'), sleeptime=0.5, duration=5, block=True): """ Cycle ``groups`` LEDs through ``colors``. Do this in a loop where we display each color for ``sleeptime`` seconds. Animate for ``duration`` seconds. If ``duration`` is None animate for...

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def _ignore_comments(lines_enum): """ Strips comments and filter empty lines. """ for line_number, line in lines_enum: line = COMMENT_RE.sub('', line) line = line.strip() if line: yield line_number, line

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def variance_increase_distance(cluster1, cluster2, data = None): """! @brief Calculates variance increase distance between two clusters. @details Clusters can be represented by list of coordinates (in this case data shouldn't be specified), or by list of indexes of points from the data (rep...

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def options_handler(self, sock, cmd, opt): "Negotiate options" if cmd == NOP: self.sendcommand(NOP) elif cmd == WILL or cmd == WONT: if self.WILLACK.has_key(opt): self.sendcommand(self.WILLACK[opt], opt) else: self.sendcommand(D...

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def get_objects_in_sequence(brain_or_object, ctype, cref): """Return a list of items """ obj = api.get_object(brain_or_object) if ctype == "backreference": return get_backreferences(obj, cref) if ctype == "contained": return get_contained_items(obj, cref) raise ValueError("Refere...

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def does_not_raise(self, function, *args, **kwargs): """ Check if a function does not raise an exception, *args and **kwargs are forwarded to the function """ try: return function(*args, **kwargs) except Exception as e: self.log_error("{} d...

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35.416667

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def posthoc_tamhane(a, val_col=None, group_col=None, welch=True, sort=False): '''Tamhane's T2 all-pairs comparison test for normally distributed data with unequal variances. Tamhane's T2 test can be performed for all-pairs comparisons in an one-factorial layout with normally distributed residuals but u...

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def allocate_observation_matrix(self): """! @brief Allocates observation matrix in line with output dynamic of the network. @details Matrix where state of each neuron is denoted by zero/one in line with Heaviside function on each iteration. @return (list) Observation matrix...

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22.526316

def from_passphrase(cls, passphrase=None): """ Create keypair from a passphrase input (a brain wallet keypair).""" if not passphrase: # run a rejection sampling algorithm to ensure the private key is # less than the curve order while True: passphrase =...

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46.333333

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def normalize_files(files, separators=None): """ Normalizes the file paths to use the POSIX path separator. *files* (:class:`~collections.abc.Iterable` of :class:`str`) contains the file paths to be normalized. *separators* (:class:`~collections.abc.Collection` of :class:`str`; or :data:`None`) optionally conta...

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def configure( cls, impl: "Union[None, str, Type[Configurable]]", **kwargs: Any ) -> None: """Configures the `AsyncHTTPClient` subclass to use. ``AsyncHTTPClient()`` actually creates an instance of a subclass. This method may be called with either a class object or the fully...

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def _geoid_radius(latitude: float) -> float: """Calculates the GEOID radius at a given latitude Parameters ---------- latitude : float Latitude (degrees) Returns ------- R : float GEOID Radius (meters) """ lat = deg2rad(latitude) return sqrt(1/(cos(lat) ** 2 / R...

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23.733333

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def get_change_type(self, ref, a1, a2): """ Given ref, allele1, and allele2, returns the type of change. The only case of an amino acid insertion is when the ref is represented as a '.'. """ if ref == '.': return self.INSERTION elif a1 == '.' or a2 == ...

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34.8

10.4

def get_most_recent_event(self, originator_id, lt=None, lte=None): """ Gets a domain event from the sequence identified by `originator_id` at the highest position. :param originator_id: ID of a sequence of events :param lt: get highest before this position :param lte: ge...

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38.3125

20.4375

def get_tables_and_gsis(): """ Get a set of tables and gsis and their configuration keys :returns: set -- A set of tuples (table_name, table_conf_key) """ table_names = set() configured_tables = get_configured_tables() not_used_tables = set(configured_tables) # Add regexp table names f...

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41.044444

19.4

def handle_input(self, ncode, wparam, lparam): """Process the key input.""" x_pos = lparam.contents.x_pos y_pos = lparam.contents.y_pos data = lparam.contents.mousedata # This is how we can distinguish mouse 1 from mouse 2 # extrainfo = lparam.contents.extrainfo ...

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39.545455

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def loadByteArray(self, page, returnError): """Must be overridden. Must return a string with the loaded data.""" returnError.contents.value = self.IllegalStateError raise NotImplementedError("You must override this method.") return ''

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52.4

14.4

def add(name, function_name, cron): """ Create an event """ lambder.add_event(name=name, function_name=function_name, cron=cron)

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44.666667

12.333333

def find_by_typename(self, typename): """ List of all objects whose type has the given name. """ return self.find_by(lambda obj: type(obj).__name__ == typename)

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37.6

10.4

def filter_by(lookup_dict, grain='os_family', merge=None, default='default', base=None): ''' .. versionadded:: 0.17.0 Look up the given grain in a given dictionary for the current OS and return the result Although this may occasionally be useful at the CLI, the primary intent of this function ...

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39.899083

28.743119

def _apply_postprocessing(marc_xml, xml, func, uuid, url): """ Apply `func` to all ``<mods:mods>`` tags from `xml`. Insert UUID. Args: marc_xml (str): Original Aleph record. xml (str): XML which will be postprocessed. func (fn): Function, which will be used for postprocessing. ...

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32.9

20.6

def ylim(self, low, high, index=1): """Set yaxis limits. Parameters ---------- low : number high : number index : int, optional Returns ------- Chart """ self.layout['yaxis' + str(index)]['range'] = [low, high] return sel...

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19.125

21.3125

def add_section(self, section): """Add a new Section object to the config. Should be a subclass of _AbstractSection.""" if not issubclass(section.__class__, _AbstractSection): raise TypeError("argument should be a subclass of Section") self.sections[section.get_key_name()] = ...

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49.142857

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def parse_atoms(self, pdb): """Parse the ATOM entries into the object""" atomre = re.compile("ATOM") atomlines = [line for line in pdb.lines if atomre.match(line)] chainresnums = {} for line in atomlines: chain = line[21] resname = line[17:20] resnum = line[22:2...

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26.56

18.48

def _trigger_event(self, event, *args, **kwargs): """Invoke an event handler.""" run_async = kwargs.pop('run_async', False) if event in self.handlers: if run_async: return self.start_background_task(self.handlers[event], *args) else: try: ...

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41.363636

16.272727

def parse_declaration_expressn_arrayliteral(self, values, es): """ Same in python. Just a square bracket enclosed array. :param values: :param es: :return: """ es = es + '[' for ast in values: es = es + self.parse_declaration_expressn(ast, es...

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28.357143

18.357143

def getPrefilter(self,chn): """ Returns the prefilter of signal chn ("HP:0.1Hz", "LP:75Hz N:50Hz", etc.) Parameters ---------- chn : int channel number Examples -------- >>> import pyedflib >>> f = pyedflib.data.test_generator() ...

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24.565217

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def _update_loaded_modules(self): """ Updates the loaded modules by checking if they are still in sys.modules """ system_modules = sys.modules.keys() for module in list(self.loaded_modules): if module not in system_modules: self.processed_filepaths.pop...

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41.222222

9.222222

def _get_api_dependencies_of(name, version='', force=False): '''Returns list of first level dependencies of the given dap from Dapi''' m, d = _get_metadap_dap(name, version=version) # We need the dependencies to install the dap, # if the dap is unsupported, raise an exception here if not force and n...

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52

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def location_history(self, **params): """ Method for `Read Device Location History <https://m2x.att.com/developer/documentation/v2/device#Read-Device-Location-History>`_ endpoint. :param params: Query parameters passed as keyword arguments. View M2X API Docs for listing of available parameters. ...

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51.909091

30.636364

def find_connected_resources(resource, dependency_graph=None): """ Collects all resources connected to the given resource and returns a dictionary mapping member resource classes to new collections containing the members found. """ # Build a resource_graph. resource_graph = \ ...

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37.210526

13.736842

def detect_traits(item): """ Build traits list from attributes of the passed item. Currently, "kind_51", "name" and "alias" are considered. See pyrocore.util.traits:dectect_traits for more details. """ return traits.detect_traits( name=item.name, alias=item.alias, filetype=(...

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36.2

16.1

def is_local_import_from(node, package_name): """Check if a node is an import from the local package. :param node: The node to check. :type node: astroid.node.NodeNG :param package_name: The name of the local package. :type package_name: str :returns: True if the node is an import from the lo...

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26.952381

18.952381

def optimize(qs, info_dict, field_map): """Add either select_related or prefetch_related to fields of the qs""" fields = collect_fields(info_dict) for field in fields: if field in field_map: field_name, opt = field_map[field] qs = (qs.prefetch_related(field_name) ...

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38.8

14.5

def validate(self, ip, **kwargs): """Check to see if this is a valid ip address.""" if ip is None: return False ip = stringify(ip) if self.IPV4_REGEX.match(ip): try: socket.inet_pton(socket.AF_INET, ip) return True ...

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29.571429

16.607143