kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def stream(identifier=None, priority=LOG_INFO, level_prefix=False): r"""Return a file object wrapping a stream to journal. Log messages written to this file as simple newline sepearted text strings are written to the journal. The file will be line buffered, so messages are actually sent after a ne...	[ "def", "stream", "(", "identifier", "=", "None", ",", "priority", "=", "LOG_INFO", ",", "level_prefix", "=", "False", ")", ":", "if", "identifier", "is", "None", ":", "if", "not", "_sys", ".", "argv", "or", "not", "_sys", ".", "argv", "[", "0", "]", ...	37.714286	27.119048
def T_dependent_property_integral_over_T(self, T1, T2): r'''Method to calculate the integral of a property over temperature with respect to temperature, using a specified method. Methods found valid by `select_valid_methods` are attempted until a method succeeds. If no methods are vali...	[ "def", "T_dependent_property_integral_over_T", "(", "self", ",", "T1", ",", "T2", ")", ":", "Tavg", "=", "0.5", "*", "(", "T1", "+", "T2", ")", "if", "self", ".", "method", ":", "# retest within range", "if", "self", ".", "test_method_validity", "(", "Tavg...	35.046512	22.627907
def _url_val(val, key, obj, kwargs): """Function applied by `HyperlinksField` to get the correct value in the schema. """ if isinstance(val, URLFor): return val.serialize(key, obj, kwargs) else: return val	[ "def", "_url_val", "(", "val", ",", "key", ",", "obj", ",", "", "", "kwargs", ")", ":", "if", "isinstance", "(", "val", ",", "URLFor", ")", ":", "return", "val", ".", "serialize", "(", "key", ",", "obj", ",", "", "", "kwargs", ")", "else", ...	29.75	12.625
def hmean_int(a, a_min=5778, a_max=1149851): """ Harmonic mean of an array, returns the closest int """ from scipy.stats import hmean return int(round(hmean(np.clip(a, a_min, a_max))))	[ "def", "hmean_int", "(", "a", ",", "a_min", "=", "5778", ",", "a_max", "=", "1149851", ")", ":", "from", "scipy", ".", "stats", "import", "hmean", "return", "int", "(", "round", "(", "hmean", "(", "np", ".", "clip", "(", "a", ",", "a_min", ",", "...	39.2	5
def _create_regex_pattern_add_optional_spaces_to_word_characters(word): """Add the regex special characters (\s*) to allow optional spaces between the characters in a word. @param word: (string) the word to be inserted into a regex pattern. @return: string: the regex pattern for that word with ...	[ "def", "_create_regex_pattern_add_optional_spaces_to_word_characters", "(", "word", ")", ":", "new_word", "=", "u\"\"", "for", "ch", "in", "word", ":", "if", "ch", ".", "isspace", "(", ")", ":", "new_word", "+=", "ch", "else", ":", "new_word", "+=", "ch", "+...	37.928571	16.857143
def propose(self): """Use the trained model to propose a new pipeline. Returns: int: Index corresponding to pipeline to try in ``dpp_matrix``. """ # generate a list of all the untried candidate pipelines candidates = self._get_candidates() # get_candidates()...	[ "def", "propose", "(", "self", ")", ":", "# generate a list of all the untried candidate pipelines", "candidates", "=", "self", ".", "_get_candidates", "(", ")", "# get_candidates() returns None when every possibility has been tried", "if", "candidates", "is", "None", ":", "r...	34.75	21.55
def dist(ctx, devpi=False, egg=False, wheel=False, auto=True): """Distribute the project.""" config.load() cmd = ["python", "setup.py", "sdist"] # Automatically create wheels if possible if auto: egg = sys.version_info.major == 2 try: import wheel as _ wheel ...	[ "def", "dist", "(", "ctx", ",", "devpi", "=", "False", ",", "egg", "=", "False", ",", "wheel", "=", "False", ",", "auto", "=", "True", ")", ":", "config", ".", "load", "(", ")", "cmd", "=", "[", "\"python\"", ",", "\"setup.py\"", ",", "\"sdist\"", ...	25.652174	18.043478
def sentiment(symbol, type='daily', date=None, token='', version=''): '''This endpoint provides social sentiment data from StockTwits. Data can be viewed as a daily value, or by minute for a given date. https://iexcloud.io/docs/api/#social-sentiment Continuous Args: symbol (string); Ticker to ...	[ "def", "sentiment", "(", "symbol", ",", "type", "=", "'daily'", ",", "date", "=", "None", ",", "token", "=", "''", ",", "version", "=", "''", ")", ":", "_raiseIfNotStr", "(", "symbol", ")", "if", "date", ":", "date", "=", "_strOrDate", "(", "date", ...	39.190476	29.285714
def losc_frame_urls(ifo, start_time, end_time): """ Get a list of urls to losc frame files Parameters ---------- ifo: str The name of the IFO to find the information about. start_time: int The gps time in GPS seconds end_time: int The end time in GPS seconds Returns...	[ "def", "losc_frame_urls", "(", "ifo", ",", "start_time", ",", "end_time", ")", ":", "data", "=", "losc_frame_json", "(", "ifo", ",", "start_time", ",", "end_time", ")", "[", "'strain'", "]", "return", "[", "d", "[", "'url'", "]", "for", "d", "in", "dat...	28.3	20.35
def main(argString=None): """The main function. :param argString: the options. :type argString: list These are the steps of this module: 1. Prints the options. 2. Finds the overlapping markers between the three reference panels and the source panel (:py:func:`findOverlappingSNPsWit...	[ "def", "main", "(", "argString", "=", "None", ")", ":", "# Getting and checking the options", "args", "=", "parseArgs", "(", "argString", ")", "checkArgs", "(", "args", ")", "logger", ".", "info", "(", "\"Options used:\"", ")", "for", "key", ",", "value", "i...	37.918803	19.542735
def is_fuse_exec(cmd): ''' Returns true if the command passed is a fuse mountable application. CLI Example: .. code-block:: bash salt '*' mount.is_fuse_exec sshfs ''' cmd_path = salt.utils.path.which(cmd) # No point in running ldd on a command that doesn't exist if not cmd_pa...	[ "def", "is_fuse_exec", "(", "cmd", ")", ":", "cmd_path", "=", "salt", ".", "utils", ".", "path", ".", "which", "(", "cmd", ")", "# No point in running ldd on a command that doesn't exist", "if", "not", "cmd_path", ":", "return", "False", "elif", "not", "salt", ...	25.85	23.55
def addCallSetFromName(self, sampleName): """ Adds a CallSet for the specified sample name. """ callSet = CallSet(self, sampleName) self.addCallSet(callSet)	[ "def", "addCallSetFromName", "(", "self", ",", "sampleName", ")", ":", "callSet", "=", "CallSet", "(", "self", ",", "sampleName", ")", "self", ".", "addCallSet", "(", "callSet", ")" ]	31.833333	4.166667
def notify(self, args, kwargs): "See signal" loop = kwargs.pop('loop', self.loop) return self.signal.prepare_notification( subscribers=self.subscribers, instance=self.instance, loop=loop).run(args, **kwargs)	[ "def", "notify", "(", "self", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "loop", "=", "kwargs", ".", "pop", "(", "'loop'", ",", "self", ".", "loop", ")", "return", "self", ".", "signal", ".", "prepare_notification", "(", "subscribers", "=",...	42.333333	11
def discover(service="ssdp:all", timeout=1, retries=2, ipAddress="239.255.255.250", port=1900): """Discovers UPnP devices in the local network. Try to discover all devices in the local network which do support UPnP. The discovery process can fail for various reasons and it is recommended to do ...	[ "def", "discover", "(", "service", "=", "\"ssdp:all\"", ",", "timeout", "=", "1", ",", "retries", "=", "2", ",", "ipAddress", "=", "\"239.255.255.250\"", ",", "port", "=", "1900", ")", ":", "socket", ".", "setdefaulttimeout", "(", "timeout", ")", "messages...	40.653846	26.371795
def sub_dsp_nodes(self): """ Returns all sub-dispatcher nodes of the dispatcher. :return: All sub-dispatcher nodes of the dispatcher. :rtype: dict[str, dict] """ return {k: v for k, v in self.nodes.items() if v['type'] == 'dispatcher'}	[ "def", "sub_dsp_nodes", "(", "self", ")", ":", "return", "{", "k", ":", "v", "for", "k", ",", "v", "in", "self", ".", "nodes", ".", "items", "(", ")", "if", "v", "[", "'type'", "]", "==", "'dispatcher'", "}" ]	27.545455	16.272727
def read_frames(file_path, frame_size, hop_size, start=0.0, end=float('inf'), buffer_size=5760000): """ Read an audio file frame by frame. The frames are yielded one after another. Args: file_path (str): Path to the file to read. frame_size (int): The number of samples per f...	[ "def", "read_frames", "(", "file_path", ",", "frame_size", ",", "hop_size", ",", "start", "=", "0.0", ",", "end", "=", "float", "(", "'inf'", ")", ",", "buffer_size", "=", "5760000", ")", ":", "rest_samples", "=", "np", ".", "array", "(", "[", "]", "...	39.142857	21.061224
def receive_accept(self, msg): ''' Returns either an Accepted or Nack message in response. The Acceptor's state must be persisted to disk prior to transmitting the Accepted message. ''' if self.promised_id is None or msg.proposal_id >= self.promised_id: self.promised_...	[ "def", "receive_accept", "(", "self", ",", "msg", ")", ":", "if", "self", ".", "promised_id", "is", "None", "or", "msg", ".", "proposal_id", ">=", "self", ".", "promised_id", ":", "self", ".", "promised_id", "=", "msg", ".", "proposal_id", "self", ".", ...	51.416667	27.25
def get_repo_info(repo_name, profile='github', ignore_cache=False): ''' Return information for a given repo. .. versionadded:: 2016.11.0 repo_name The name of the repository. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. co...	[ "def", "get_repo_info", "(", "repo_name", ",", "profile", "=", "'github'", ",", "ignore_cache", "=", "False", ")", ":", "org_name", "=", "_get_config_value", "(", "profile", ",", "'org_name'", ")", "key", "=", "\"github.{0}:{1}:repo_info\"", ".", "format", "(", ...	30.367347	22.857143
def verify(self, signing_cert_str, cert_str): """ Verifies if a certificate is valid and signed by a given certificate. :param signing_cert_str: This certificate will be used to verify the signature. Must be a string representation ...	[ "def", "verify", "(", "self", ",", "signing_cert_str", ",", "cert_str", ")", ":", "try", ":", "ca_cert", "=", "crypto", ".", "load_certificate", "(", "crypto", ".", "FILETYPE_PEM", ",", "signing_cert_str", ")", "cert", "=", "crypto", ".", "load_certificate", ...	48.421053	25.368421
def get_asset_admin_session(self, proxy=None): """Gets an asset administration session for creating, updating and deleting assets. arg: proxy (osid.proxy.Proxy): a proxy return: (osid.repository.AssetAdminSession) - an ``AssetAdminSession`` raise: NullArgument - ``pr...	[ "def", "get_asset_admin_session", "(", "self", ",", "proxy", "=", "None", ")", ":", "asset_lookup_session", "=", "self", ".", "_provider_manager", ".", "get_asset_lookup_session", "(", "proxy", ")", "return", "AssetAdminSession", "(", "self", ".", "_provider_manager...	46.333333	17.111111
def import_locations(self, data): """Parse `GNU miscfiles`_ cities data files. ``import_locations()`` returns a list containing :class:`City` objects. It expects data files in the same format that `GNU miscfiles`_ provides, that is:: ID : 1 Type ...	[ "def", "import_locations", "(", "self", ",", "data", ")", ":", "self", ".", "_data", "=", "data", "if", "hasattr", "(", "data", ",", "'read'", ")", ":", "data", "=", "data", ".", "read", "(", ")", ".", "split", "(", "'//\\n'", ")", "elif", "isinsta...	38.733333	20.077778
def import_phantom_module(xml_file): """ Insert a fake Python module to sys.modules, based on a XML file. The XML file is expected to conform to Pydocweb DTD. The fake module will contain dummy objects, which guarantee the following: - Docstrings are correct. - Class inheritance relationships ...	[ "def", "import_phantom_module", "(", "xml_file", ")", ":", "import", "lxml", ".", "etree", "as", "etree", "object_cache", "=", "{", "}", "tree", "=", "etree", ".", "parse", "(", "xml_file", ")", "root", "=", "tree", ".", "getroot", "(", ")", "# Sort item...	34.231343	16.947761
def _grid_in_property(field_name, docstring, read_only=False, closed_only=False): """Create a GridIn property.""" def getter(self): if closed_only and not self._closed: raise AttributeError("can only get %r on a closed file" % field_name...	[ "def", "_grid_in_property", "(", "field_name", ",", "docstring", ",", "read_only", "=", "False", ",", "closed_only", "=", "False", ")", ":", "def", "getter", "(", "self", ")", ":", "if", "closed_only", "and", "not", "self", ".", "_closed", ":", "raise", ...	40.678571	16.857143
def advance_permutation(a, increasing=True, forward=True): """ Advance a list of unique, ordered elements in-place, lexicographically increasing or backward, by rightmost or leftmost digit. Returns False if the permutation wrapped around - i.e. went from lexicographically greatest to least, and Tru...	[ "def", "advance_permutation", "(", "a", ",", "increasing", "=", "True", ",", "forward", "=", "True", ")", ":", "if", "not", "forward", ":", "a", ".", "reverse", "(", ")", "cmp", "=", "operator", ".", "lt", "if", "increasing", "else", "operator", ".", ...	31.484848	24.515152
def _get_record_attrs(out_keys): """Check for records, a single key plus output attributes. """ if len(out_keys) == 1: attr = list(out_keys.keys())[0] if out_keys[attr]: return attr, out_keys[attr] return None, None	[ "def", "_get_record_attrs", "(", "out_keys", ")", ":", "if", "len", "(", "out_keys", ")", "==", "1", ":", "attr", "=", "list", "(", "out_keys", ".", "keys", "(", ")", ")", "[", "0", "]", "if", "out_keys", "[", "attr", "]", ":", "return", "attr", ...	31.5	7.125
def clean(self): """Delete all of the records""" # Deleting seems to be really weird and unrelable. self._session \ .query(Process) \ .filter(Process.d_vid == self._d_vid) \ .delete(synchronize_session='fetch') for r in self.records: self...	[ "def", "clean", "(", "self", ")", ":", "# Deleting seems to be really weird and unrelable.", "self", ".", "_session", ".", "query", "(", "Process", ")", ".", "filter", "(", "Process", ".", "d_vid", "==", "self", ".", "_d_vid", ")", ".", "delete", "(", "synch...	27.615385	18
def json_changebase(obj, changer): """ Given a primitive compound Python object (i.e. a dict, string, int, or list) and a changer function that takes a primitive Python object as an argument, apply the changer function to the object and each sub-component. Return the newly-reencoded object. ...	[ "def", "json_changebase", "(", "obj", ",", "changer", ")", ":", "if", "isinstance", "(", "obj", ",", "(", "str", ",", "unicode", ")", ")", ":", "return", "changer", "(", "obj", ")", "elif", "isinstance", "(", "obj", ",", "(", "int", ",", "long", ")...	28.916667	19.416667
def display_element_selected(self, f): """Decorator routes Alexa Display.ElementSelected request to the wrapped view function. @ask.display_element_selected def eval_element(): return "", 200 The wrapped function is registered as the display_element_selected view function ...	[ "def", "display_element_selected", "(", "self", ",", "f", ")", ":", "self", ".", "_display_element_selected_func", "=", "f", "@", "wraps", "(", "f", ")", "def", "wrapper", "(", "", "args", ",", "", "*", "kw", ")", ":", "self", ".", "_flask_view_func", ...	32.157895	19
def merge(self, other): """ Merge another object as needed. """ other.qualify() for n in ('name', 'qname', 'min', 'max', 'default', 'type', 'nillable', 'f...	[ "def", "merge", "(", "self", ",", "other", ")", ":", "other", ".", "qualify", "(", ")", "for", "n", "in", "(", "'name'", ",", "'qname'", ",", "'min'", ",", "'max'", ",", "'default'", ",", "'type'", ",", "'nillable'", ",", "'form_qualified'", ",", ")"...	26.631579	10.736842
def write_file(self, what, filename, data): """Write `data` to `filename` (if not a dry run) after announcing it `what` is used in a log message to identify what is being written to the file. """ log.info("writing %s to %s", what, filename) if sys.version_info >= (3,): ...	[ "def", "write_file", "(", "self", ",", "what", ",", "filename", ",", "data", ")", ":", "log", ".", "info", "(", "\"writing %s to %s\"", ",", "what", ",", "filename", ")", "if", "sys", ".", "version_info", ">=", "(", "3", ",", ")", ":", "data", "=", ...	35.384615	12.538462
def make_iml4(R, iml_disagg, imtls=None, poes_disagg=(None,), curves=()): """ :returns: an ArrayWrapper over a 4D array of shape (N, R, M, P) """ if imtls is None: imtls = {imt: [iml] for imt, iml in iml_disagg.items()} N = len(curves) or 1 M = len(imtls) P = len(poes_disagg) arr...	[ "def", "make_iml4", "(", "R", ",", "iml_disagg", ",", "imtls", "=", "None", ",", "poes_disagg", "=", "(", "None", ",", ")", ",", "curves", "=", "(", ")", ")", ":", "if", "imtls", "is", "None", ":", "imtls", "=", "{", "imt", ":", "[", "iml", "]"...	38.588235	15.176471
def gen_data_files(src_dir): """ generates a list of files contained in the given directory (and its subdirectories) in the format required by the ``package_data`` parameter of the ``setuptools.setup`` function. Parameters ---------- src_dir : str (relative) path to the directory st...	[ "def", "gen_data_files", "(", "src_dir", ")", ":", "fpaths", "=", "[", "]", "base", "=", "os", ".", "path", ".", "dirname", "(", "src_dir", ")", "for", "root", ",", "dir", ",", "files", "in", "os", ".", "walk", "(", "src_dir", ")", ":", "if", "le...	29.541667	20.125
def make_connector(self, app=None, bind=None): """Creates the connector for a given state and bind.""" return _EngineConnector(self, self.get_app(app), bind)	[ "def", "make_connector", "(", "self", ",", "app", "=", "None", ",", "bind", "=", "None", ")", ":", "return", "_EngineConnector", "(", "self", ",", "self", ".", "get_app", "(", "app", ")", ",", "bind", ")" ]	57	9.333333
def autodiscover(): """Import all `ddp` submodules from `settings.INSTALLED_APPS`.""" from django.utils.module_loading import autodiscover_modules from dddp.api import API autodiscover_modules('ddp', register_to=API) return API	[ "def", "autodiscover", "(", ")", ":", "from", "django", ".", "utils", ".", "module_loading", "import", "autodiscover_modules", "from", "dddp", ".", "api", "import", "API", "autodiscover_modules", "(", "'ddp'", ",", "register_to", "=", "API", ")", "return", "AP...	40.333333	15.166667
def compress_subproperties (properties): """ Combine all subproperties into their parent properties Requires: for every subproperty, there is a parent property. All features are explicitly expressed. This rule probably shouldn't be needed, but build-request.expand-no-defaults is b...	[ "def", "compress_subproperties", "(", "properties", ")", ":", "from", ".", "property", "import", "Property", "assert", "is_iterable_typed", "(", "properties", ",", "Property", ")", "result", "=", "[", "]", "matched_subs", "=", "set", "(", ")", "all_subs", "=",...	30.078947	20.210526
def to_json(self): """ Represented as a list of edges: dependent: index of child dep: dependency label governer: index of parent dependentgloss: gloss of parent governergloss: gloss of parent """ edges = [] for root in s...	[ "def", "to_json", "(", "self", ")", ":", "edges", "=", "[", "]", "for", "root", "in", "self", ".", "roots", ":", "edges", ".", "append", "(", "{", "'governer'", ":", "0", ",", "'dep'", ":", "\"root\"", ",", "'dependent'", ":", "root", "+", "1", "...	33.413793	11
def add_db_germline_flag(line): """Adds a DB flag for Germline filters, allowing downstream compatibility with PureCN. """ if line.startswith("#CHROM"): headers = ['##INFO=<ID=DB,Number=0,Type=Flag,Description="Likely germline variant">'] return "\n".join(headers) + "\n" + line elif line...	[ "def", "add_db_germline_flag", "(", "line", ")", ":", "if", "line", ".", "startswith", "(", "\"#CHROM\"", ")", ":", "headers", "=", "[", "'##INFO=<ID=DB,Number=0,Type=Flag,Description=\"Likely germline variant\">'", "]", "return", "\"\\n\"", ".", "join", "(", "headers...	38.461538	13.461538
def main(): '''Base58 encode or decode FILE, or standard input, to standard output.''' import sys import argparse stdout = buffer(sys.stdout) parser = argparse.ArgumentParser(description=main.__doc__) parser.add_argument( 'file', metavar='FILE', nargs='?', type...	[ "def", "main", "(", ")", ":", "import", "sys", "import", "argparse", "stdout", "=", "buffer", "(", "sys", ".", "stdout", ")", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "main", ".", "__doc__", ")", "parser", ".", "add_argu...	24.214286	20.738095
def getNextNode(nodes,usednodes,parent): '''Get next node in a breadth-first traversal of nodes that have not been used yet''' for e in edges: if e.source==parent: if e.target in usednodes: x = e.target break elif e.target==parent: if e.sou...	[ "def", "getNextNode", "(", "nodes", ",", "usednodes", ",", "parent", ")", ":", "for", "e", "in", "edges", ":", "if", "e", ".", "source", "==", "parent", ":", "if", "e", ".", "target", "in", "usednodes", ":", "x", "=", "e", ".", "target", "break", ...	32.583333	15.583333
def register_on_machine_data_changed(self, callback): """Set the callback function to consume on machine data changed events. Callback receives a IMachineDataChangedEvent object. Returns the callback_id """ event_type = library.VBoxEventType.on_machine_data_changed retu...	[ "def", "register_on_machine_data_changed", "(", "self", ",", "callback", ")", ":", "event_type", "=", "library", ".", "VBoxEventType", ".", "on_machine_data_changed", "return", "self", ".", "event_source", ".", "register_callback", "(", "callback", ",", "event_type", ...	41.333333	20
def doublefork(pidfile, logfile, cwd, umask): # pragma: nocover '''Daemonize current process. After first fork we return to the shell and removing our self from controling terminal via `setsid`. After second fork we are not session leader any more and cant get controlling terminal when opening files...	[ "def", "doublefork", "(", "pidfile", ",", "logfile", ",", "cwd", ",", "umask", ")", ":", "# pragma: nocover", "try", ":", "if", "os", ".", "fork", "(", ")", ":", "os", ".", "_exit", "(", "os", ".", "EX_OK", ")", "except", "OSError", "as", "e", ":",...	33.558824	17.558824
def EndVector(self, vectorNumElems): """EndVector writes data necessary to finish vector construction.""" self.assertNested() ## @cond FLATBUFFERS_INTERNAL self.nested = False ## @endcond # we already made space for this, so write without PrependUint32 self.Place...	[ "def", "EndVector", "(", "self", ",", "vectorNumElems", ")", ":", "self", ".", "assertNested", "(", ")", "## @cond FLATBUFFERS_INTERNAL", "self", ".", "nested", "=", "False", "## @endcond", "# we already made space for this, so write without PrependUint32", "self", ".", ...	36.4	14
def cache_last_modified(request, argz, *kwz): '''Last modification date for a cached page. Intended for usage in conditional views (@condition decorator).''' response, site, cachekey = kwz.get('_view_data') or initview(request) if not response: return None return response[1]	[ "def", "cache_last_modified", "(", "request", ",", "", "argz", ",", "", "*", "kwz", ")", ":", "response", ",", "site", ",", "cachekey", "=", "kwz", ".", "get", "(", "'_view_data'", ")", "or", "initview", "(", "request", ")", "if", "not", "response", ...	46.333333	17
def _sample_points(X, centers, oversampling_factor, random_state): r""" Sample points independently with probability .. math:: p_x = \frac{\ell \cdot d^2(x, \mathcal{C})}{\phi_X(\mathcal{C})} """ # re-implement evaluate_cost here, to avoid redundant computation distances = pairwise_di...	[ "def", "_sample_points", "(", "X", ",", "centers", ",", "oversampling_factor", ",", "random_state", ")", ":", "# re-implement evaluate_cost here, to avoid redundant computation", "distances", "=", "pairwise_distances", "(", "X", ",", "centers", ")", ".", "min", "(", "...	27.45	23.4
def _parse_process_name(name_str): """Parses the process string and returns the process name and its directives Process strings my contain directive information with the following syntax:: proc_name={'directive':'val'} This method parses this string and returns the...	[ "def", "_parse_process_name", "(", "name_str", ")", ":", "directives", "=", "None", "fields", "=", "name_str", ".", "split", "(", "\"=\"", ")", "process_name", "=", "fields", "[", "0", "]", "if", "len", "(", "fields", ")", "==", "2", ":", "_directives", ...	32	21.021277
def logparse(args, *kwargs): """ Parse access log on the terminal application. If list of files are given, parse each file. Otherwise, parse standard input. :param args: supporting functions after processed raw log line :type: list of callables :rtype: tuple of (statistics, key/value report) ...	[ "def", "logparse", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "from", "clitool", ".", "cli", "import", "clistream", "from", "clitool", ".", "processor", "import", "SimpleDictReporter", "lst", "=", "[", "parse", "]", "+", "args", "reporter", "="...	34.3125	15.6875
def simple_callable(decorator): '''Decorator used to create consistent decorators. Consistent in the meaning that the wrapper do not have to care if the wrapped callable is a function or a method, it will always receive a valid callable. If the decorator is used with a function, the wrapper will ...	[ "def", "simple_callable", "(", "decorator", ")", ":", "def", "meta_decorator", "(", "function", ")", ":", "wrapper", "=", "decorator", "(", "function", ")", "if", "reflect", ".", "inside_class_definition", "(", "depth", "=", "2", ")", ":", "def", "method_wra...	30	23.345455
def receive(self): """ Returns a single request. Takes the first request from the list of requests and returns it. If the list is empty, None is returned. Returns: Response: If a new request is available a Request object is returned, otherwise None is ...	[ "def", "receive", "(", "self", ")", ":", "pickled_request", "=", "self", ".", "_connection", ".", "connection", ".", "lpop", "(", "self", ".", "_request_key", ")", "return", "pickle", ".", "loads", "(", "pickled_request", ")", "if", "pickled_request", "is", ...	41.166667	25.666667
def members(self): """ Children of the collection's item :rtype: [Collection] """ return list( [ self.children_class(child) for child in self.graph.subjects(RDF_NAMESPACES.DTS.parent, self.asNode()) ] )	[ "def", "members", "(", "self", ")", ":", "return", "list", "(", "[", "self", ".", "children_class", "(", "child", ")", "for", "child", "in", "self", ".", "graph", ".", "subjects", "(", "RDF_NAMESPACES", ".", "DTS", ".", "parent", ",", "self", ".", "a...	26.272727	21
def CaptureVariableInternal(self, value, depth, limits, can_enqueue=True): """Captures a single nameless object into Variable message. TODO(vlif): safely evaluate iterable types. TODO(vlif): safely call str(value) Args: value: data to capture depth: nested depth of dictionaries and vectors...	[ "def", "CaptureVariableInternal", "(", "self", ",", "value", ",", "depth", ",", "limits", ",", "can_enqueue", "=", "True", ")", ":", "if", "depth", "==", "limits", ".", "max_depth", ":", "return", "{", "'varTableIndex'", ":", "0", "}", "# Buffer full.", "i...	37.490385	19.144231
def remove_index_from_handle(handle_with_index): ''' Returns index and handle separately, in a tuple. :handle_with_index: The handle string with an index (e.g. 500:prefix/suffix) :return: index and handle as a tuple. ''' split = handle_with_index.split(':') if len(split) == 2: ...	[ "def", "remove_index_from_handle", "(", "handle_with_index", ")", ":", "split", "=", "handle_with_index", ".", "split", "(", "':'", ")", "if", "len", "(", "split", ")", "==", "2", ":", "split", "[", "0", "]", "=", "int", "(", "split", "[", "0", "]", ...	30.8	15.3
def undisplayable_info(obj, html=False): "Generate helpful message regarding an undisplayable object" collate = '<tt>collate</tt>' if html else 'collate' info = "For more information, please consult the Composing Data tutorial (http://git.io/vtIQh)" if isinstance(obj, HoloMap): error = "HoloMap...	[ "def", "undisplayable_info", "(", "obj", ",", "html", "=", "False", ")", ":", "collate", "=", "'<tt>collate</tt>'", "if", "html", "else", "'collate'", "info", "=", "\"For more information, please consult the Composing Data tutorial (http://git.io/vtIQh)\"", "if", "isinstanc...	53.35	28.75
def encode(self, value): ''' :param value: value to encode ''' encoded = strToBytes(value) + b'\x00' return Bits(bytes=encoded)	[ "def", "encode", "(", "self", ",", "value", ")", ":", "encoded", "=", "strToBytes", "(", "value", ")", "+", "b'\\x00'", "return", "Bits", "(", "bytes", "=", "encoded", ")" ]	27	14.666667
def purge(self, jid, node): """ Delete all items from a node. :param jid: JID of the PubSub service :param node: Name of the PubSub node :type node: :class:`str` Requires :attr:`.xso.Feature.PURGE`. """ iq = aioxmpp.stanza.IQ( type_=aioxmpp....	[ "def", "purge", "(", "self", ",", "jid", ",", "node", ")", ":", "iq", "=", "aioxmpp", ".", "stanza", ".", "IQ", "(", "type_", "=", "aioxmpp", ".", "structs", ".", "IQType", ".", "SET", ",", "to", "=", "jid", ",", "payload", "=", "pubsub_xso", "."...	24.090909	15.272727
def maybe_cast_to_datetime(value, dtype, errors='raise'): """ try to cast the array/value to a datetimelike dtype, converting float nan to iNaT """ from pandas.core.tools.timedeltas import to_timedelta from pandas.core.tools.datetimes import to_datetime if dtype is not None: if isinstan...	[ "def", "maybe_cast_to_datetime", "(", "value", ",", "dtype", ",", "errors", "=", "'raise'", ")", ":", "from", "pandas", ".", "core", ".", "tools", ".", "timedeltas", "import", "to_timedelta", "from", "pandas", ".", "core", ".", "tools", ".", "datetimes", "...	44.07377	21.188525
def _get_stringlist_from_commastring(self, field): # type: (str) -> List[str] """Return list of strings from comma separated list Args: field (str): Field containing comma separated list Returns: List[str]: List of strings """ strings = self.data...	[ "def", "_get_stringlist_from_commastring", "(", "self", ",", "field", ")", ":", "# type: (str) -> List[str]", "strings", "=", "self", ".", "data", ".", "get", "(", "field", ")", "if", "strings", ":", "return", "strings", ".", "split", "(", "','", ")", "else"...	27.666667	15.933333
def entities(self): """ Access the entities :returns: twilio.rest.authy.v1.service.entity.EntityList :rtype: twilio.rest.authy.v1.service.entity.EntityList """ if self._entities is None: self._entities = EntityList(self._version, service_sid=self._solution['s...	[ "def", "entities", "(", "self", ")", ":", "if", "self", ".", "_entities", "is", "None", ":", "self", ".", "_entities", "=", "EntityList", "(", "self", ".", "_version", ",", "service_sid", "=", "self", ".", "_solution", "[", "'sid'", "]", ",", ")", "r...	34.8	18.8
def put(self, coro): """Put a coroutine in the queue to be executed.""" # Avoid logging when a coroutine is queued or executed to avoid log # spam from coroutines that are started on every keypress. assert asyncio.iscoroutine(coro) self._queue.put_nowait(coro)	[ "def", "put", "(", "self", ",", "coro", ")", ":", "# Avoid logging when a coroutine is queued or executed to avoid log", "# spam from coroutines that are started on every keypress.", "assert", "asyncio", ".", "iscoroutine", "(", "coro", ")", "self", ".", "_queue", ".", "put...	49.166667	14.166667
def on_options(self, req, resp, **kwargs): """Respond with JSON formatted resource description on OPTIONS request. Args: req (falcon.Request): Optional request object. Defaults to None. resp (falcon.Response): Optional response object. Defaults to None. kwargs (dict)...	[ "def", "on_options", "(", "self", ",", "req", ",", "resp", ",", "", "", "kwargs", ")", ":", "resp", ".", "set_header", "(", "'Allow'", ",", "', '", ".", "join", "(", "self", ".", "allowed_methods", "(", ")", ")", ")", "resp", ".", "body", "=", ...	37.6	22.3
def growthfromrange(rangegrowth, startdate, enddate): """ Annual growth given growth from start date to end date. """ _yrs = (pd.Timestamp(enddate) - pd.Timestamp(startdate)).total_seconds() /\ dt.timedelta(365.25).total_seconds() return yrlygrowth(rangegrowth, _yrs)	[ "def", "growthfromrange", "(", "rangegrowth", ",", "startdate", ",", "enddate", ")", ":", "_yrs", "=", "(", "pd", ".", "Timestamp", "(", "enddate", ")", "-", "pd", ".", "Timestamp", "(", "startdate", ")", ")", ".", "total_seconds", "(", ")", "/", "dt",...	41.857143	11.285714
def symlink_list(self, load): ''' Return a list of symlinked files and dirs ''' if 'env' in load: # "env" is not supported; Use "saltenv". load.pop('env') ret = {} if 'saltenv' not in load: return {} if not isinstance(load['sal...	[ "def", "symlink_list", "(", "self", ",", "load", ")", ":", "if", "'env'", "in", "load", ":", "# \"env\" is not supported; Use \"saltenv\".", "load", ".", "pop", "(", "'env'", ")", "ret", "=", "{", "}", "if", "'saltenv'", "not", "in", "load", ":", "return",...	34.64	19.28
def update_in_hdx(self): # type: () -> None """Check if user exists in HDX and if so, update user Returns: None """ capacity = self.data.get('capacity') if capacity is not None: del self.data['capacity'] # remove capacity (which comes from users ...	[ "def", "update_in_hdx", "(", "self", ")", ":", "# type: () -> None", "capacity", "=", "self", ".", "data", ".", "get", "(", "'capacity'", ")", "if", "capacity", "is", "not", "None", ":", "del", "self", ".", "data", "[", "'capacity'", "]", "# remove capacit...	34.307692	15.538462
def rescale(self, fun): """ perform raster computations with custom functions and assign them to the existing raster object in memory Parameters ---------- fun: function the custom function to compute on the data Examples -------- >>> with Ra...	[ "def", "rescale", "(", "self", ",", "fun", ")", ":", "if", "self", ".", "bands", "!=", "1", ":", "raise", "ValueError", "(", "'only single band images are currently supported'", ")", "# load array", "mat", "=", "self", ".", "matrix", "(", ")", "# scale values"...	27	22.153846
def create_cache_database(self): """ Create a new SQLite3 database for use with Cache objects :raises: IOError if there is a problem creating the database file """ conn = sqlite3.connect(self.database) conn.text_factory = str c = conn.cursor() c.execute("""CR...	[ "def", "create_cache_database", "(", "self", ")", ":", "conn", "=", "sqlite3", ".", "connect", "(", "self", ".", "database", ")", "conn", ".", "text_factory", "=", "str", "c", "=", "conn", ".", "cursor", "(", ")", "c", ".", "execute", "(", "\"\"\"CREAT...	32.75	15.45
def convert_coordinates(coords, origin, wgs84, wrapped): """ Convert coordinates from one crs to another """ if isinstance(coords, list) or isinstance(coords, tuple): try: if isinstance(coords[0], list) or isinstance(coords[0], tuple): return [convert_coordinates(list(c), ori...	[ "def", "convert_coordinates", "(", "coords", ",", "origin", ",", "wgs84", ",", "wrapped", ")", ":", "if", "isinstance", "(", "coords", ",", "list", ")", "or", "isinstance", "(", "coords", ",", "tuple", ")", ":", "try", ":", "if", "isinstance", "(", "co...	38.625	21.4375
def AgregarTributo(self, cod_tributo, descripcion=None, base_imponible=None, alicuota=None, importe=None): "Agrega la información referente a los tributos de la liquidación" trib = {'codTributo': cod_tributo, 'descripcion': descripcion, 'baseImponible': base_...	[ "def", "AgregarTributo", "(", "self", ",", "cod_tributo", ",", "descripcion", "=", "None", ",", "base_imponible", "=", "None", ",", "alicuota", "=", "None", ",", "importe", "=", "None", ")", ":", "trib", "=", "{", "'codTributo'", ":", "cod_tributo", ",", ...	53.090909	22.727273
def cmd(self, args=None, interact=True): """Process command-line arguments.""" if args is None: parsed_args = arguments.parse_args() else: parsed_args = arguments.parse_args(args) self.exit_code = 0 with self.handling_exceptions(): self.use_arg...	[ "def", "cmd", "(", "self", ",", "args", "=", "None", ",", "interact", "=", "True", ")", ":", "if", "args", "is", "None", ":", "parsed_args", "=", "arguments", ".", "parse_args", "(", ")", "else", ":", "parsed_args", "=", "arguments", ".", "parse_args",...	38.4	11.7
def _get_supervisorctl_bin(bin_env): ''' Return supervisorctl command to call, either from a virtualenv, an argument passed in, or from the global modules options ''' cmd = 'supervisorctl' if not bin_env: which_result = __salt__['cmd.which_bin']([cmd]) if which_result is None: ...	[ "def", "_get_supervisorctl_bin", "(", "bin_env", ")", ":", "cmd", "=", "'supervisorctl'", "if", "not", "bin_env", ":", "which_result", "=", "__salt__", "[", "'cmd.which_bin'", "]", "(", "[", "cmd", "]", ")", "if", "which_result", "is", "None", ":", "raise", ...	32.636364	19.363636
def crypto_sign_seed_keypair(seed): """ Computes and returns the public key and secret key using the seed ``seed``. :param seed: bytes :rtype: (bytes(public_key), bytes(secret_key)) """ if len(seed) != crypto_sign_SEEDBYTES: raise exc.ValueError("Invalid seed") pk = ffi.new("unsign...	[ "def", "crypto_sign_seed_keypair", "(", "seed", ")", ":", "if", "len", "(", "seed", ")", "!=", "crypto_sign_SEEDBYTES", ":", "raise", "exc", ".", "ValueError", "(", "\"Invalid seed\"", ")", "pk", "=", "ffi", ".", "new", "(", "\"unsigned char[]\"", ",", "cryp...	30.954545	18.772727
def _CopyFromDateTimeValues(self, date_time_values): """Copies time elements from date and time values. Args: date_time_values (dict[str, int]): date and time values, such as year, month, day of month, hours, minutes, seconds, microseconds. Raises: ValueError: if no helper can be cr...	[ "def", "_CopyFromDateTimeValues", "(", "self", ",", "date_time_values", ")", ":", "year", "=", "date_time_values", ".", "get", "(", "'year'", ",", "0", ")", "month", "=", "date_time_values", ".", "get", "(", "'month'", ",", "0", ")", "day_of_month", "=", "...	39.580645	20.516129
def eval_objfn(self): """Compute components of objective function as well as total contribution to objective function. """ fval = self.obfn_f(self.obfn_fvar()) g0val = self.obfn_g0(self.obfn_g0var()) g1val = self.obfn_g1(self.obfn_g1var()) obj = fval + g0val + g1...	[ "def", "eval_objfn", "(", "self", ")", ":", "fval", "=", "self", ".", "obfn_f", "(", "self", ".", "obfn_fvar", "(", ")", ")", "g0val", "=", "self", ".", "obfn_g0", "(", "self", ".", "obfn_g0var", "(", ")", ")", "g1val", "=", "self", ".", "obfn_g1",...	35.5	8.6
def find_obfuscatables(tokens, obfunc, ignore_length=False): """ Iterates over tokens, which must be an equivalent output to what tokenize.generate_tokens() produces, calling obfunc on each with the following parameters: - tokens: The current list of tokens. - index: ...	[ "def", "find_obfuscatables", "(", "tokens", ",", "obfunc", ",", "ignore_length", "=", "False", ")", ":", "global", "keyword_args", "keyword_args", "=", "analyze", ".", "enumerate_keyword_args", "(", "tokens", ")", "global", "imported_modules", "imported_modules", "=...	39.104167	18.9375
def _get_baremetal_switches(self, port): """Get switch ip addresses from baremetal transaction. This method is used to extract switch information from the transaction where VNIC_TYPE is baremetal. :param port: Received port transaction :returns: list of all switches :re...	[ "def", "_get_baremetal_switches", "(", "self", ",", "port", ")", ":", "all_switches", "=", "set", "(", ")", "active_switches", "=", "set", "(", ")", "all_link_info", "=", "port", "[", "bc", ".", "portbindings", ".", "PROFILE", "]", "[", "'local_link_informat...	34.827586	16.862069
def lock(remote=None): ''' Place an update.lk ``remote`` can either be a dictionary containing repo configuration information, or a pattern. If the latter, then remotes for which the URL matches the pattern will be locked. ''' def _do_lock(repo): success = [] failed = [] ...	[ "def", "lock", "(", "remote", "=", "None", ")", ":", "def", "_do_lock", "(", "repo", ")", ":", "success", "=", "[", "]", "failed", "=", "[", "]", "if", "not", "os", ".", "path", ".", "exists", "(", "repo", "[", "'lockfile'", "]", ")", ":", "try...	31.622222	19.444444
def write_trailer(self, sector, key_a=(0xFF, 0xFF, 0xFF, 0xFF, 0xFF, 0xFF), auth_bits=(0xFF, 0x07, 0x80), user_data=0x69, key_b=(0xFF, 0xFF, 0xFF, 0xFF, 0xFF, 0xFF)): """ Writes sector trailer of specified sector. Tag and auth must be set - does auth. If value is None, val...	[ "def", "write_trailer", "(", "self", ",", "sector", ",", "key_a", "=", "(", "0xFF", ",", "0xFF", ",", "0xFF", ",", "0xFF", ",", "0xFF", ",", "0xFF", ")", ",", "auth_bits", "=", "(", "0xFF", ",", "0x07", ",", "0x80", ")", ",", "user_data", "=", "0...	55.888889	25
def summoner_names_to_id(summoners): """ Gets a list of summoners names and return a dictionary mapping the player name to his/her summoner id :param summoners: a list of player names :return: a dictionary name -> id """ ids = {} for start, end in _slice(0, len(summoners), 40): resul...	[ "def", "summoner_names_to_id", "(", "summoners", ")", ":", "ids", "=", "{", "}", "for", "start", ",", "end", "in", "_slice", "(", "0", ",", "len", "(", "summoners", ")", ",", "40", ")", ":", "result", "=", "get_summoners_by_name", "(", "summoners", "["...	37.75	14.416667
def fetch(self, category=CATEGORY_QUESTION, offset=DEFAULT_OFFSET): """Fetch questions from the Kitsune url. :param category: the category of items to fetch :offset: obtain questions after offset :returns: a generator of questions """ if not offset: offset = ...	[ "def", "fetch", "(", "self", ",", "category", "=", "CATEGORY_QUESTION", ",", "offset", "=", "DEFAULT_OFFSET", ")", ":", "if", "not", "offset", ":", "offset", "=", "DEFAULT_OFFSET", "kwargs", "=", "{", "\"offset\"", ":", "offset", "}", "items", "=", "super"...	30.714286	16.214286
def set(self, time, value, compact=False): """Set the value for the time series. If compact is True, only set the value if it's different from what it would be anyway. """ if (len(self) == 0) or (not compact) or \ (compact and self.get(time) != value): self._...	[ "def", "set", "(", "self", ",", "time", ",", "value", ",", "compact", "=", "False", ")", ":", "if", "(", "len", "(", "self", ")", "==", "0", ")", "or", "(", "not", "compact", ")", "or", "(", "compact", "and", "self", ".", "get", "(", "time", ...	41	11.625
def _to_r(o, as_data=False, level=0): """Helper function to convert python data structures to R equivalents TODO: a single model for transforming to r to handle * function args * lists as function args """ if o is None: return "NA" if isinstance(o, basestring): return o ...	[ "def", "_to_r", "(", "o", ",", "as_data", "=", "False", ",", "level", "=", "0", ")", ":", "if", "o", "is", "None", ":", "return", "\"NA\"", "if", "isinstance", "(", "o", ",", "basestring", ")", ":", "return", "o", "if", "hasattr", "(", "o", ",", ...	36.5	16.333333
def spring_project( adata, project_dir, embedding_method, subplot_name = None, cell_groupings=None, custom_color_tracks=None, total_counts_key = 'n_counts', overwrite = False ): """Exports to a SPRING project directory [Weinreb17]_. Visualize annotation present in `adata...	[ "def", "spring_project", "(", "adata", ",", "project_dir", ",", "embedding_method", ",", "subplot_name", "=", "None", ",", "cell_groupings", "=", "None", ",", "custom_color_tracks", "=", "None", ",", "total_counts_key", "=", "'n_counts'", ",", "overwrite", "=", ...	44.972973	24.297297
def censor_entity_types(self, entity_types): # type: (set) -> TermDocMatrixFactory ''' Entity types to exclude from feature construction. Terms matching specificed entities, instead of labeled by their lower case orthographic form or lemma, will be labeled by their entity type. ...	[ "def", "censor_entity_types", "(", "self", ",", "entity_types", ")", ":", "# type: (set) -> TermDocMatrixFactory", "assert", "type", "(", "entity_types", ")", "==", "set", "self", ".", "_entity_types_to_censor", "=", "entity_types", "self", ".", "_feats_from_spacy_doc",...	36.5	22.333333
def limit(limit, every=1): """This decorator factory creates a decorator that can be applied to functions in order to limit the rate the function can be invoked. The rate is `limit` over `every`, where limit is the number of invocation allowed every `every` seconds. limit(4, 60) creates ...	[ "def", "limit", "(", "limit", ",", "every", "=", "1", ")", ":", "def", "limitdecorator", "(", "fn", ")", ":", "\"\"\"This is the actual decorator that performs the rate-limiting.\"\"\"", "semaphore", "=", "_threading", ".", "Semaphore", "(", "limit", ")", "@", "_f...	37.740741	20.592593
def zrangebylex(self, name, min, max, start=None, num=None): """ Return the lexicographical range of values from sorted set ``name`` between ``min`` and ``max``. If ``start`` and ``num`` are specified, then return a slice of the range. """ if (start is not None a...	[ "def", "zrangebylex", "(", "self", ",", "name", ",", "min", ",", "max", ",", "start", "=", "None", ",", "num", "=", "None", ")", ":", "if", "(", "start", "is", "not", "None", "and", "num", "is", "None", ")", "or", "(", "num", "is", "not", "None...	44.333333	17.533333
def __dict_to_service_spec(spec): ''' Converts a dictionary into kubernetes V1ServiceSpec instance. ''' spec_obj = kubernetes.client.V1ServiceSpec() for key, value in iteritems(spec): # pylint: disable=too-many-nested-blocks if key == 'ports': spec_obj.ports = [] for...	[ "def", "__dict_to_service_spec", "(", "spec", ")", ":", "spec_obj", "=", "kubernetes", ".", "client", ".", "V1ServiceSpec", "(", ")", "for", "key", ",", "value", "in", "iteritems", "(", "spec", ")", ":", "# pylint: disable=too-many-nested-blocks", "if", "key", ...	39.238095	17.333333
def write_to_disk(filename, delete=False, content=get_time()): """ Write filename out to disk """ if not os.path.exists(os.path.dirname(filename)): return if delete: if os.path.lexists(filename): os.remove(filename) else: with open(filename, 'wb') as f: ...	[ "def", "write_to_disk", "(", "filename", ",", "delete", "=", "False", ",", "content", "=", "get_time", "(", ")", ")", ":", "if", "not", "os", ".", "path", ".", "exists", "(", "os", ".", "path", ".", "dirname", "(", "filename", ")", ")", ":", "retur...	28.916667	12.083333
def update_g(self, fs=None, qinv=None, fc=None, kappa_tst_re=1.0, kappa_tst_im=0.0, kappa_pu_re=1.0, kappa_pu_im=0.0, kappa_c=1.0): """ Calculate the open loop gain g(f,t) given the new parameters kappa_c(t), kappa_a(t), f_c(t), fs, and qinv. Parameters ...	[ "def", "update_g", "(", "self", ",", "fs", "=", "None", ",", "qinv", "=", "None", ",", "fc", "=", "None", ",", "kappa_tst_re", "=", "1.0", ",", "kappa_tst_im", "=", "0.0", ",", "kappa_pu_re", "=", "1.0", ",", "kappa_pu_im", "=", "0.0", ",", "kappa_c"...	39.631579	19.447368
def default_decoder(self, obj): """Handle a dict that might contain a wrapped state for a custom type.""" typename, marshalled_state = self.unwrap_callback(obj) if typename is None: return obj try: cls, unmarshaller = self.serializer.unmarshallers[typename] ...	[ "def", "default_decoder", "(", "self", ",", "obj", ")", ":", "typename", ",", "marshalled_state", "=", "self", ".", "unwrap_callback", "(", "obj", ")", "if", "typename", "is", "None", ":", "return", "obj", "try", ":", "cls", ",", "unmarshaller", "=", "se...	37.235294	20.352941
def write_table(self): """ \|write_table\| with HTML table format. :Example: :ref:`example-html-table-writer` .. note:: - \|None\| is not written """ tags = _get_tags_module() with self._logger: self._verify_property() ...	[ "def", "write_table", "(", "self", ")", ":", "tags", "=", "_get_tags_module", "(", ")", "with", "self", ".", "_logger", ":", "self", ".", "_verify_property", "(", ")", "self", ".", "_preprocess", "(", ")", "if", "typepy", ".", "is_not_null_string", "(", ...	26.62069	21.034483
def prior_H0(self, H0, H0_min=0, H0_max=200): """ checks whether the parameter vector has left its bound, if so, adds a big number """ if H0 < H0_min or H0 > H0_max: penalty = -10**15 return penalty, False else: return 0, True	[ "def", "prior_H0", "(", "self", ",", "H0", ",", "H0_min", "=", "0", ",", "H0_max", "=", "200", ")", ":", "if", "H0", "<", "H0_min", "or", "H0", ">", "H0_max", ":", "penalty", "=", "-", "10", "**", "15", "return", "penalty", ",", "False", "else", ...	32.666667	12.666667
def get_cookies_from_cache(username): """ Returns a RequestsCookieJar containing the cached cookies for the given user. """ logging.debug('Trying to get cookies from the cache.') path = get_cookies_cache_path(username) cj = requests.cookies.RequestsCookieJar() try: cached_cj = ...	[ "def", "get_cookies_from_cache", "(", "username", ")", ":", "logging", ".", "debug", "(", "'Trying to get cookies from the cache.'", ")", "path", "=", "get_cookies_cache_path", "(", "username", ")", "cj", "=", "requests", ".", "cookies", ".", "RequestsCookieJar", "(...	29.1	19.1
def index_all(self, index_name): """Index all available documents, using streaming_bulk for speed Args: index_name (string): The index """ oks = 0 notoks = 0 for ok, item in streaming_bulk( self.es_client, self._iter_documents(index_name) ...	[ "def", "index_all", "(", "self", ",", "index_name", ")", ":", "oks", "=", "0", "notoks", "=", "0", "for", "ok", ",", "item", "in", "streaming_bulk", "(", "self", ".", "es_client", ",", "self", ".", "_iter_documents", "(", "index_name", ")", ")", ":", ...	24.571429	16.619048
def before_reject(analysis): """Function triggered before 'unassign' transition takes place """ worksheet = analysis.getWorksheet() if not worksheet: return # Rejection of a routine analysis causes the removal of their duplicates for dup in worksheet.get_duplicates_for(analysis): ...	[ "def", "before_reject", "(", "analysis", ")", ":", "worksheet", "=", "analysis", ".", "getWorksheet", "(", ")", "if", "not", "worksheet", ":", "return", "# Rejection of a routine analysis causes the removal of their duplicates", "for", "dup", "in", "worksheet", ".", "...	34.1	15.2
def OnUpView(self, event): """Request to move up the hierarchy to highest-weight parent""" node = self.activated_node parents = [] selected_parent = None if node: if hasattr( self.adapter, 'best_parent' ): selected_parent = self.adapter.best_p...	[ "def", "OnUpView", "(", "self", ",", "event", ")", ":", "node", "=", "self", ".", "activated_node", "parents", "=", "[", "]", "selected_parent", "=", "None", "if", "node", ":", "if", "hasattr", "(", "self", ".", "adapter", ",", "'best_parent'", ")", ":...	41.956522	18.782609
def add(self, name, filt, info='', params=(), setn=None): """ Add filter. Parameters ---------- name : str filter name filt : array_like boolean filter array info : str informative description of the filter params : tup...	[ "def", "add", "(", "self", ",", "name", ",", "filt", ",", "info", "=", "''", ",", "params", "=", "(", ")", ",", "setn", "=", "None", ")", ":", "iname", "=", "'{:.0f}_'", ".", "format", "(", "self", ".", "n", ")", "+", "name", "self", ".", "in...	23.775	16.925
def get_composition_repository_session(self, proxy): """Gets the session for retrieving composition to repository mappings. arg proxy (osid.proxy.Proxy): a proxy return: (osid.repository.CompositionRepositorySession) - a CompositionRepositorySession raise: O...	[ "def", "get_composition_repository_session", "(", "self", ",", "proxy", ")", ":", "if", "not", "self", ".", "supports_composition_repository", "(", ")", ":", "raise", "Unimplemented", "(", ")", "try", ":", "from", ".", "import", "sessions", "except", "ImportErro...	39	17.192308
def get_strokes(self): """Return a css snippet containing all stroke style options""" def stroke_dict_to_css(stroke, i=None): """Return a css style for the given option""" css = [ '%s.series%s {\n' % (self.id, '.serie-%d' % i if i is not None else...	[ "def", "get_strokes", "(", "self", ")", ":", "def", "stroke_dict_to_css", "(", "stroke", ",", "i", "=", "None", ")", ":", "\"\"\"Return a css style for the given option\"\"\"", "css", "=", "[", "'%s.series%s {\\n'", "%", "(", "self", ".", "id", ",", "'.serie-%d'...	39.387097	17.870968
def format_h4(s, format="text", indents=0): """ Encloses string in format text Args, Returns: see format_h1() """ _CHAR = "^" if format.startswith("text"): return format_underline(s, _CHAR, indents) elif format.startswith("markdown"): return ["#### {}".format(s)]...	[ "def", "format_h4", "(", "s", ",", "format", "=", "\"text\"", ",", "indents", "=", "0", ")", ":", "_CHAR", "=", "\"^\"", "if", "format", ".", "startswith", "(", "\"text\"", ")", ":", "return", "format_underline", "(", "s", ",", "_CHAR", ",", "indents",...	27.857143	10.285714
def propagate(self, **args): """ Propagates activation through the network. Optionally, takes input layer names as keywords, and their associated activations. If input layer(s) are given, then propagate() will return the output layer's activation. If there is more than one output...	[ "def", "propagate", "(", "self", ",", "", "", "args", ")", ":", "self", ".", "prePropagate", "(", "", "", "args", ")", "for", "key", "in", "args", ":", "layer", "=", "self", ".", "getLayer", "(", "key", ")", "if", "layer", ".", "kind", "==", ...	44.447761	19.671642
def hexdump_iter(logger, fd, width=16, skip=True, hexii=False, begin=0, highlight=None): r""" Return a hexdump-dump of a string as a generator of lines. Unless you have massive amounts of data you probably want to use :meth:`hexdump`. Arguments: logger(FastLogger): Logger object fd(fil...	[ "def", "hexdump_iter", "(", "logger", ",", "fd", ",", "width", "=", "16", ",", "skip", "=", "True", ",", "hexii", "=", "False", ",", "begin", "=", "0", ",", "highlight", "=", "None", ")", ":", "style", "=", "logger", ".", "style", ".", "hexdump", ...	32.111111	21.303704
def banlist(self, channel): """ Get the channel banlist. Required arguments: * channel - Channel of which to get the banlist for. """ with self.lock: self.is_in_channel(channel) self.send('MODE %s b' % channel) bans = [] w...	[ "def", "banlist", "(", "self", ",", "channel", ")", ":", "with", "self", ".", "lock", ":", "self", ".", "is_in_channel", "(", "channel", ")", "self", ".", "send", "(", "'MODE %s b'", "%", "channel", ")", "bans", "=", "[", "]", "while", "self", ".", ...	33.904762	15.428571

def stream(identifier=None, priority=LOG_INFO, level_prefix=False): r"""Return a file object wrapping a stream to journal. Log messages written to this file as simple newline sepearted text strings are written to the journal. The file will be line buffered, so messages are actually sent after a ne...

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def T_dependent_property_integral_over_T(self, T1, T2): r'''Method to calculate the integral of a property over temperature with respect to temperature, using a specified method. Methods found valid by `select_valid_methods` are attempted until a method succeeds. If no methods are vali...

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def _url_val(val, key, obj, **kwargs): """Function applied by `HyperlinksField` to get the correct value in the schema. """ if isinstance(val, URLFor): return val.serialize(key, obj, **kwargs) else: return val

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def hmean_int(a, a_min=5778, a_max=1149851): """ Harmonic mean of an array, returns the closest int """ from scipy.stats import hmean return int(round(hmean(np.clip(a, a_min, a_max))))

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def _create_regex_pattern_add_optional_spaces_to_word_characters(word): """Add the regex special characters (\s*) to allow optional spaces between the characters in a word. @param word: (string) the word to be inserted into a regex pattern. @return: string: the regex pattern for that word with ...

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def propose(self): """Use the trained model to propose a new pipeline. Returns: int: Index corresponding to pipeline to try in ``dpp_matrix``. """ # generate a list of all the untried candidate pipelines candidates = self._get_candidates() # get_candidates()...

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def dist(ctx, devpi=False, egg=False, wheel=False, auto=True): """Distribute the project.""" config.load() cmd = ["python", "setup.py", "sdist"] # Automatically create wheels if possible if auto: egg = sys.version_info.major == 2 try: import wheel as _ wheel ...

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def sentiment(symbol, type='daily', date=None, token='', version=''): '''This endpoint provides social sentiment data from StockTwits. Data can be viewed as a daily value, or by minute for a given date. https://iexcloud.io/docs/api/#social-sentiment Continuous Args: symbol (string); Ticker to ...

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def losc_frame_urls(ifo, start_time, end_time): """ Get a list of urls to losc frame files Parameters ---------- ifo: str The name of the IFO to find the information about. start_time: int The gps time in GPS seconds end_time: int The end time in GPS seconds Returns...

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def main(argString=None): """The main function. :param argString: the options. :type argString: list These are the steps of this module: 1. Prints the options. 2. Finds the overlapping markers between the three reference panels and the source panel (:py:func:`findOverlappingSNPsWit...

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def is_fuse_exec(cmd): ''' Returns true if the command passed is a fuse mountable application. CLI Example: .. code-block:: bash salt '*' mount.is_fuse_exec sshfs ''' cmd_path = salt.utils.path.which(cmd) # No point in running ldd on a command that doesn't exist if not cmd_pa...

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25.85

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def addCallSetFromName(self, sampleName): """ Adds a CallSet for the specified sample name. """ callSet = CallSet(self, sampleName) self.addCallSet(callSet)

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31.833333

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def notify(self, *args, **kwargs): "See signal" loop = kwargs.pop('loop', self.loop) return self.signal.prepare_notification( subscribers=self.subscribers, instance=self.instance, loop=loop).run(*args, **kwargs)

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def discover(service="ssdp:all", timeout=1, retries=2, ipAddress="239.255.255.250", port=1900): """Discovers UPnP devices in the local network. Try to discover all devices in the local network which do support UPnP. The discovery process can fail for various reasons and it is recommended to do ...

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def sub_dsp_nodes(self): """ Returns all sub-dispatcher nodes of the dispatcher. :return: All sub-dispatcher nodes of the dispatcher. :rtype: dict[str, dict] """ return {k: v for k, v in self.nodes.items() if v['type'] == 'dispatcher'}

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27.545455

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def read_frames(file_path, frame_size, hop_size, start=0.0, end=float('inf'), buffer_size=5760000): """ Read an audio file frame by frame. The frames are yielded one after another. Args: file_path (str): Path to the file to read. frame_size (int): The number of samples per f...

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39.142857

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def receive_accept(self, msg): ''' Returns either an Accepted or Nack message in response. The Acceptor's state must be persisted to disk prior to transmitting the Accepted message. ''' if self.promised_id is None or msg.proposal_id >= self.promised_id: self.promised_...

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51.416667

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def get_repo_info(repo_name, profile='github', ignore_cache=False): ''' Return information for a given repo. .. versionadded:: 2016.11.0 repo_name The name of the repository. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. co...

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def verify(self, signing_cert_str, cert_str): """ Verifies if a certificate is valid and signed by a given certificate. :param signing_cert_str: This certificate will be used to verify the signature. Must be a string representation ...

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48.421053

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def get_asset_admin_session(self, proxy=None): """Gets an asset administration session for creating, updating and deleting assets. arg: proxy (osid.proxy.Proxy): a proxy return: (osid.repository.AssetAdminSession) - an ``AssetAdminSession`` raise: NullArgument - ``pr...

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46.333333

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def import_locations(self, data): """Parse `GNU miscfiles`_ cities data files. ``import_locations()`` returns a list containing :class:`City` objects. It expects data files in the same format that `GNU miscfiles`_ provides, that is:: ID : 1 Type ...

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def import_phantom_module(xml_file): """ Insert a fake Python module to sys.modules, based on a XML file. The XML file is expected to conform to Pydocweb DTD. The fake module will contain dummy objects, which guarantee the following: - Docstrings are correct. - Class inheritance relationships ...

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34.231343

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def _grid_in_property(field_name, docstring, read_only=False, closed_only=False): """Create a GridIn property.""" def getter(self): if closed_only and not self._closed: raise AttributeError("can only get %r on a closed file" % field_name...

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40.678571

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def advance_permutation(a, increasing=True, forward=True): """ Advance a list of unique, ordered elements in-place, lexicographically increasing or backward, by rightmost or leftmost digit. Returns False if the permutation wrapped around - i.e. went from lexicographically greatest to least, and Tru...

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31.484848

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def _get_record_attrs(out_keys): """Check for records, a single key plus output attributes. """ if len(out_keys) == 1: attr = list(out_keys.keys())[0] if out_keys[attr]: return attr, out_keys[attr] return None, None

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31.5

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def clean(self): """Delete all of the records""" # Deleting seems to be really weird and unrelable. self._session \ .query(Process) \ .filter(Process.d_vid == self._d_vid) \ .delete(synchronize_session='fetch') for r in self.records: self...

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27.615385

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def json_changebase(obj, changer): """ Given a primitive compound Python object (i.e. a dict, string, int, or list) and a changer function that takes a primitive Python object as an argument, apply the changer function to the object and each sub-component. Return the newly-reencoded object. ...

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28.916667

19.416667

def display_element_selected(self, f): """Decorator routes Alexa Display.ElementSelected request to the wrapped view function. @ask.display_element_selected def eval_element(): return "", 200 The wrapped function is registered as the display_element_selected view function ...

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32.157895

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def merge(self, other): """ Merge another object as needed. """ other.qualify() for n in ('name', 'qname', 'min', 'max', 'default', 'type', 'nillable', 'f...

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26.631579

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def write_file(self, what, filename, data): """Write `data` to `filename` (if not a dry run) after announcing it `what` is used in a log message to identify what is being written to the file. """ log.info("writing %s to %s", what, filename) if sys.version_info >= (3,): ...

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def make_iml4(R, iml_disagg, imtls=None, poes_disagg=(None,), curves=()): """ :returns: an ArrayWrapper over a 4D array of shape (N, R, M, P) """ if imtls is None: imtls = {imt: [iml] for imt, iml in iml_disagg.items()} N = len(curves) or 1 M = len(imtls) P = len(poes_disagg) arr...

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def gen_data_files(src_dir): """ generates a list of files contained in the given directory (and its subdirectories) in the format required by the ``package_data`` parameter of the ``setuptools.setup`` function. Parameters ---------- src_dir : str (relative) path to the directory st...

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def make_connector(self, app=None, bind=None): """Creates the connector for a given state and bind.""" return _EngineConnector(self, self.get_app(app), bind)

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def autodiscover(): """Import all `ddp` submodules from `settings.INSTALLED_APPS`.""" from django.utils.module_loading import autodiscover_modules from dddp.api import API autodiscover_modules('ddp', register_to=API) return API

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def compress_subproperties (properties): """ Combine all subproperties into their parent properties Requires: for every subproperty, there is a parent property. All features are explicitly expressed. This rule probably shouldn't be needed, but build-request.expand-no-defaults is b...

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def to_json(self): """ Represented as a list of edges: dependent: index of child dep: dependency label governer: index of parent dependentgloss: gloss of parent governergloss: gloss of parent """ edges = [] for root in s...

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def add_db_germline_flag(line): """Adds a DB flag for Germline filters, allowing downstream compatibility with PureCN. """ if line.startswith("#CHROM"): headers = ['##INFO=<ID=DB,Number=0,Type=Flag,Description="Likely germline variant">'] return "\n".join(headers) + "\n" + line elif line...

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def main(): '''Base58 encode or decode FILE, or standard input, to standard output.''' import sys import argparse stdout = buffer(sys.stdout) parser = argparse.ArgumentParser(description=main.__doc__) parser.add_argument( 'file', metavar='FILE', nargs='?', type...

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def getNextNode(nodes,usednodes,parent): '''Get next node in a breadth-first traversal of nodes that have not been used yet''' for e in edges: if e.source==parent: if e.target in usednodes: x = e.target break elif e.target==parent: if e.sou...

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def register_on_machine_data_changed(self, callback): """Set the callback function to consume on machine data changed events. Callback receives a IMachineDataChangedEvent object. Returns the callback_id """ event_type = library.VBoxEventType.on_machine_data_changed retu...

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def doublefork(pidfile, logfile, cwd, umask): # pragma: nocover '''Daemonize current process. After first fork we return to the shell and removing our self from controling terminal via `setsid`. After second fork we are not session leader any more and cant get controlling terminal when opening files...

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def EndVector(self, vectorNumElems): """EndVector writes data necessary to finish vector construction.""" self.assertNested() ## @cond FLATBUFFERS_INTERNAL self.nested = False ## @endcond # we already made space for this, so write without PrependUint32 self.Place...

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def cache_last_modified(request, *argz, **kwz): '''Last modification date for a cached page. Intended for usage in conditional views (@condition decorator).''' response, site, cachekey = kwz.get('_view_data') or initview(request) if not response: return None return response[1]

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def _sample_points(X, centers, oversampling_factor, random_state): r""" Sample points independently with probability .. math:: p_x = \frac{\ell \cdot d^2(x, \mathcal{C})}{\phi_X(\mathcal{C})} """ # re-implement evaluate_cost here, to avoid redundant computation distances = pairwise_di...

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def _parse_process_name(name_str): """Parses the process string and returns the process name and its directives Process strings my contain directive information with the following syntax:: proc_name={'directive':'val'} This method parses this string and returns the...

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def logparse(*args, **kwargs): """ Parse access log on the terminal application. If list of files are given, parse each file. Otherwise, parse standard input. :param args: supporting functions after processed raw log line :type: list of callables :rtype: tuple of (statistics, key/value report) ...

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def simple_callable(decorator): '''Decorator used to create consistent decorators. Consistent in the meaning that the wrapper do not have to care if the wrapped callable is a function or a method, it will always receive a valid callable. If the decorator is used with a function, the wrapper will ...

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def receive(self): """ Returns a single request. Takes the first request from the list of requests and returns it. If the list is empty, None is returned. Returns: Response: If a new request is available a Request object is returned, otherwise None is ...

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def members(self): """ Children of the collection's item :rtype: [Collection] """ return list( [ self.children_class(child) for child in self.graph.subjects(RDF_NAMESPACES.DTS.parent, self.asNode()) ] )

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def CaptureVariableInternal(self, value, depth, limits, can_enqueue=True): """Captures a single nameless object into Variable message. TODO(vlif): safely evaluate iterable types. TODO(vlif): safely call str(value) Args: value: data to capture depth: nested depth of dictionaries and vectors...

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def remove_index_from_handle(handle_with_index): ''' Returns index and handle separately, in a tuple. :handle_with_index: The handle string with an index (e.g. 500:prefix/suffix) :return: index and handle as a tuple. ''' split = handle_with_index.split(':') if len(split) == 2: ...

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30.8

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def undisplayable_info(obj, html=False): "Generate helpful message regarding an undisplayable object" collate = '<tt>collate</tt>' if html else 'collate' info = "For more information, please consult the Composing Data tutorial (http://git.io/vtIQh)" if isinstance(obj, HoloMap): error = "HoloMap...

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def encode(self, value): ''' :param value: value to encode ''' encoded = strToBytes(value) + b'\x00' return Bits(bytes=encoded)

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def purge(self, jid, node): """ Delete all items from a node. :param jid: JID of the PubSub service :param node: Name of the PubSub node :type node: :class:`str` Requires :attr:`.xso.Feature.PURGE`. """ iq = aioxmpp.stanza.IQ( type_=aioxmpp....

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def maybe_cast_to_datetime(value, dtype, errors='raise'): """ try to cast the array/value to a datetimelike dtype, converting float nan to iNaT """ from pandas.core.tools.timedeltas import to_timedelta from pandas.core.tools.datetimes import to_datetime if dtype is not None: if isinstan...

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def _get_stringlist_from_commastring(self, field): # type: (str) -> List[str] """Return list of strings from comma separated list Args: field (str): Field containing comma separated list Returns: List[str]: List of strings """ strings = self.data...

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def entities(self): """ Access the entities :returns: twilio.rest.authy.v1.service.entity.EntityList :rtype: twilio.rest.authy.v1.service.entity.EntityList """ if self._entities is None: self._entities = EntityList(self._version, service_sid=self._solution['s...

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def put(self, coro): """Put a coroutine in the queue to be executed.""" # Avoid logging when a coroutine is queued or executed to avoid log # spam from coroutines that are started on every keypress. assert asyncio.iscoroutine(coro) self._queue.put_nowait(coro)

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def on_options(self, req, resp, **kwargs): """Respond with JSON formatted resource description on OPTIONS request. Args: req (falcon.Request): Optional request object. Defaults to None. resp (falcon.Response): Optional response object. Defaults to None. kwargs (dict)...

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def growthfromrange(rangegrowth, startdate, enddate): """ Annual growth given growth from start date to end date. """ _yrs = (pd.Timestamp(enddate) - pd.Timestamp(startdate)).total_seconds() /\ dt.timedelta(365.25).total_seconds() return yrlygrowth(rangegrowth, _yrs)

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def symlink_list(self, load): ''' Return a list of symlinked files and dirs ''' if 'env' in load: # "env" is not supported; Use "saltenv". load.pop('env') ret = {} if 'saltenv' not in load: return {} if not isinstance(load['sal...

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def update_in_hdx(self): # type: () -> None """Check if user exists in HDX and if so, update user Returns: None """ capacity = self.data.get('capacity') if capacity is not None: del self.data['capacity'] # remove capacity (which comes from users ...

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def rescale(self, fun): """ perform raster computations with custom functions and assign them to the existing raster object in memory Parameters ---------- fun: function the custom function to compute on the data Examples -------- >>> with Ra...

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def create_cache_database(self): """ Create a new SQLite3 database for use with Cache objects :raises: IOError if there is a problem creating the database file """ conn = sqlite3.connect(self.database) conn.text_factory = str c = conn.cursor() c.execute("""CR...

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def convert_coordinates(coords, origin, wgs84, wrapped): """ Convert coordinates from one crs to another """ if isinstance(coords, list) or isinstance(coords, tuple): try: if isinstance(coords[0], list) or isinstance(coords[0], tuple): return [convert_coordinates(list(c), ori...

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def AgregarTributo(self, cod_tributo, descripcion=None, base_imponible=None, alicuota=None, importe=None): "Agrega la información referente a los tributos de la liquidación" trib = {'codTributo': cod_tributo, 'descripcion': descripcion, 'baseImponible': base_...

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def cmd(self, args=None, interact=True): """Process command-line arguments.""" if args is None: parsed_args = arguments.parse_args() else: parsed_args = arguments.parse_args(args) self.exit_code = 0 with self.handling_exceptions(): self.use_arg...

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38.4

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def _get_supervisorctl_bin(bin_env): ''' Return supervisorctl command to call, either from a virtualenv, an argument passed in, or from the global modules options ''' cmd = 'supervisorctl' if not bin_env: which_result = __salt__['cmd.which_bin']([cmd]) if which_result is None: ...

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def crypto_sign_seed_keypair(seed): """ Computes and returns the public key and secret key using the seed ``seed``. :param seed: bytes :rtype: (bytes(public_key), bytes(secret_key)) """ if len(seed) != crypto_sign_SEEDBYTES: raise exc.ValueError("Invalid seed") pk = ffi.new("unsign...

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def _CopyFromDateTimeValues(self, date_time_values): """Copies time elements from date and time values. Args: date_time_values (dict[str, int]): date and time values, such as year, month, day of month, hours, minutes, seconds, microseconds. Raises: ValueError: if no helper can be cr...

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def eval_objfn(self): """Compute components of objective function as well as total contribution to objective function. """ fval = self.obfn_f(self.obfn_fvar()) g0val = self.obfn_g0(self.obfn_g0var()) g1val = self.obfn_g1(self.obfn_g1var()) obj = fval + g0val + g1...

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def find_obfuscatables(tokens, obfunc, ignore_length=False): """ Iterates over *tokens*, which must be an equivalent output to what tokenize.generate_tokens() produces, calling *obfunc* on each with the following parameters: - **tokens:** The current list of tokens. - **index:** ...

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def _get_baremetal_switches(self, port): """Get switch ip addresses from baremetal transaction. This method is used to extract switch information from the transaction where VNIC_TYPE is baremetal. :param port: Received port transaction :returns: list of all switches :re...

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34.827586

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def lock(remote=None): ''' Place an update.lk ``remote`` can either be a dictionary containing repo configuration information, or a pattern. If the latter, then remotes for which the URL matches the pattern will be locked. ''' def _do_lock(repo): success = [] failed = [] ...

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def write_trailer(self, sector, key_a=(0xFF, 0xFF, 0xFF, 0xFF, 0xFF, 0xFF), auth_bits=(0xFF, 0x07, 0x80), user_data=0x69, key_b=(0xFF, 0xFF, 0xFF, 0xFF, 0xFF, 0xFF)): """ Writes sector trailer of specified sector. Tag and auth must be set - does auth. If value is None, val...

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55.888889

25

def summoner_names_to_id(summoners): """ Gets a list of summoners names and return a dictionary mapping the player name to his/her summoner id :param summoners: a list of player names :return: a dictionary name -> id """ ids = {} for start, end in _slice(0, len(summoners), 40): resul...

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37.75

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def fetch(self, category=CATEGORY_QUESTION, offset=DEFAULT_OFFSET): """Fetch questions from the Kitsune url. :param category: the category of items to fetch :offset: obtain questions after offset :returns: a generator of questions """ if not offset: offset = ...

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def set(self, time, value, compact=False): """Set the value for the time series. If compact is True, only set the value if it's different from what it would be anyway. """ if (len(self) == 0) or (not compact) or \ (compact and self.get(time) != value): self._...

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def _to_r(o, as_data=False, level=0): """Helper function to convert python data structures to R equivalents TODO: a single model for transforming to r to handle * function args * lists as function args """ if o is None: return "NA" if isinstance(o, basestring): return o ...

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36.5

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def spring_project( adata, project_dir, embedding_method, subplot_name = None, cell_groupings=None, custom_color_tracks=None, total_counts_key = 'n_counts', overwrite = False ): """Exports to a SPRING project directory [Weinreb17]_. Visualize annotation present in `adata...

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44.972973

24.297297

def censor_entity_types(self, entity_types): # type: (set) -> TermDocMatrixFactory ''' Entity types to exclude from feature construction. Terms matching specificed entities, instead of labeled by their lower case orthographic form or lemma, will be labeled by their entity type. ...

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36.5

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def limit(limit, every=1): """This decorator factory creates a decorator that can be applied to functions in order to limit the rate the function can be invoked. The rate is `limit` over `every`, where limit is the number of invocation allowed every `every` seconds. limit(4, 60) creates ...

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def zrangebylex(self, name, min, max, start=None, num=None): """ Return the lexicographical range of values from sorted set ``name`` between ``min`` and ``max``. If ``start`` and ``num`` are specified, then return a slice of the range. """ if (start is not None a...

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44.333333

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def __dict_to_service_spec(spec): ''' Converts a dictionary into kubernetes V1ServiceSpec instance. ''' spec_obj = kubernetes.client.V1ServiceSpec() for key, value in iteritems(spec): # pylint: disable=too-many-nested-blocks if key == 'ports': spec_obj.ports = [] for...

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39.238095

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def write_to_disk(filename, delete=False, content=get_time()): """ Write filename out to disk """ if not os.path.exists(os.path.dirname(filename)): return if delete: if os.path.lexists(filename): os.remove(filename) else: with open(filename, 'wb') as f: ...

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28.916667

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def update_g(self, fs=None, qinv=None, fc=None, kappa_tst_re=1.0, kappa_tst_im=0.0, kappa_pu_re=1.0, kappa_pu_im=0.0, kappa_c=1.0): """ Calculate the open loop gain g(f,t) given the new parameters kappa_c(t), kappa_a(t), f_c(t), fs, and qinv. Parameters ...

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39.631579

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def default_decoder(self, obj): """Handle a dict that might contain a wrapped state for a custom type.""" typename, marshalled_state = self.unwrap_callback(obj) if typename is None: return obj try: cls, unmarshaller = self.serializer.unmarshallers[typename] ...

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37.235294

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def write_table(self): """ |write_table| with HTML table format. :Example: :ref:`example-html-table-writer` .. note:: - |None| is not written """ tags = _get_tags_module() with self._logger: self._verify_property() ...

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26.62069

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def prior_H0(self, H0, H0_min=0, H0_max=200): """ checks whether the parameter vector has left its bound, if so, adds a big number """ if H0 < H0_min or H0 > H0_max: penalty = -10**15 return penalty, False else: return 0, True

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32.666667

12.666667

def get_cookies_from_cache(username): """ Returns a RequestsCookieJar containing the cached cookies for the given user. """ logging.debug('Trying to get cookies from the cache.') path = get_cookies_cache_path(username) cj = requests.cookies.RequestsCookieJar() try: cached_cj = ...

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29.1

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def index_all(self, index_name): """Index all available documents, using streaming_bulk for speed Args: index_name (string): The index """ oks = 0 notoks = 0 for ok, item in streaming_bulk( self.es_client, self._iter_documents(index_name) ...

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24.571429

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def before_reject(analysis): """Function triggered before 'unassign' transition takes place """ worksheet = analysis.getWorksheet() if not worksheet: return # Rejection of a routine analysis causes the removal of their duplicates for dup in worksheet.get_duplicates_for(analysis): ...

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34.1

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def OnUpView(self, event): """Request to move up the hierarchy to highest-weight parent""" node = self.activated_node parents = [] selected_parent = None if node: if hasattr( self.adapter, 'best_parent' ): selected_parent = self.adapter.best_p...

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41.956522

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def add(self, name, filt, info='', params=(), setn=None): """ Add filter. Parameters ---------- name : str filter name filt : array_like boolean filter array info : str informative description of the filter params : tup...

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23.775

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def get_composition_repository_session(self, proxy): """Gets the session for retrieving composition to repository mappings. arg proxy (osid.proxy.Proxy): a proxy return: (osid.repository.CompositionRepositorySession) - a CompositionRepositorySession raise: O...

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39

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def get_strokes(self): """Return a css snippet containing all stroke style options""" def stroke_dict_to_css(stroke, i=None): """Return a css style for the given option""" css = [ '%s.series%s {\n' % (self.id, '.serie-%d' % i if i is not None else...

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39.387097

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def format_h4(s, format="text", indents=0): """ Encloses string in format text Args, Returns: see format_h1() """ _CHAR = "^" if format.startswith("text"): return format_underline(s, _CHAR, indents) elif format.startswith("markdown"): return ["#### {}".format(s)]...

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27.857143

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def propagate(self, **args): """ Propagates activation through the network. Optionally, takes input layer names as keywords, and their associated activations. If input layer(s) are given, then propagate() will return the output layer's activation. If there is more than one output...

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44.447761

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def hexdump_iter(logger, fd, width=16, skip=True, hexii=False, begin=0, highlight=None): r""" Return a hexdump-dump of a string as a generator of lines. Unless you have massive amounts of data you probably want to use :meth:`hexdump`. Arguments: logger(FastLogger): Logger object fd(fil...

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32.111111

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def banlist(self, channel): """ Get the channel banlist. Required arguments: * channel - Channel of which to get the banlist for. """ with self.lock: self.is_in_channel(channel) self.send('MODE %s b' % channel) bans = [] w...

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33.904762

15.428571