kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def send_to_splunk( session=None, url=None, data=None, headers=None, verify=False, ssl_options=None, timeout=10.0): """send_to_splunk Send formatted msgs to Splunk. This will throw exceptions for any errors. It is decoupled from the publishers to ...	[ "def", "send_to_splunk", "(", "session", "=", "None", ",", "url", "=", "None", ",", "data", "=", "None", ",", "headers", "=", "None", ",", "verify", "=", "False", ",", "ssl_options", "=", "None", ",", "timeout", "=", "10.0", ")", ":", "r", "=", "se...	25.709677	16.612903
def encipher(self,string): """Encipher string using Enigma M3 cipher according to initialised key. Punctuation and whitespace are removed from the input. Example:: ciphertext = Enigma(settings=('A','A','A'),rotors=(1,2,3),reflector='B', ringstellung=('F','V'...	[ "def", "encipher", "(", "self", ",", "string", ")", ":", "string", "=", "self", ".", "remove_punctuation", "(", "string", ")", "ret", "=", "''", "for", "c", "in", "string", ".", "upper", "(", ")", ":", "if", "c", ".", "isalpha", "(", ")", ":", "r...	39.5	19.8
def unpack(self, gpsd_socket_response): """Sets new socket data as DataStream attributes in those initialised dictionaries Arguments: gpsd_socket_response (json object): Provides: self attributes, e.g., self.lat, self.gdop Raises: AttributeError: 'str' object ...	[ "def", "unpack", "(", "self", ",", "gpsd_socket_response", ")", ":", "try", ":", "fresh_data", "=", "json", ".", "loads", "(", "gpsd_socket_response", ")", "# 'class' is popped for iterator lead", "class_name", "=", "fresh_data", ".", "pop", "(", "'class'", ")", ...	52.62963	28.740741
def _find_already_built_wheel(metadata_directory): """Check for a wheel already built during the get_wheel_metadata hook. """ if not metadata_directory: return None metadata_parent = os.path.dirname(metadata_directory) if not os.path.isfile(pjoin(metadata_parent, WHEEL_BUILT_MARKER)): ...	[ "def", "_find_already_built_wheel", "(", "metadata_directory", ")", ":", "if", "not", "metadata_directory", ":", "return", "None", "metadata_parent", "=", "os", ".", "path", ".", "dirname", "(", "metadata_directory", ")", "if", "not", "os", ".", "path", ".", "...	34.3	18.05
def existing_gene(store, panel_obj, hgnc_id): """Check if gene is already added to a panel.""" existing_genes = {gene['hgnc_id']: gene for gene in panel_obj['genes']} return existing_genes.get(hgnc_id)	[ "def", "existing_gene", "(", "store", ",", "panel_obj", ",", "hgnc_id", ")", ":", "existing_genes", "=", "{", "gene", "[", "'hgnc_id'", "]", ":", "gene", "for", "gene", "in", "panel_obj", "[", "'genes'", "]", "}", "return", "existing_genes", ".", "get", ...	52.5	10.5
def create_job_queue(self, queue_name, priority, state, compute_env_order): """ Create a job queue :param queue_name: Queue name :type queue_name: str :param priority: Queue priority :type priority: int :param state: Queue state :type state: string ...	[ "def", "create_job_queue", "(", "self", ",", "queue_name", ",", "priority", ",", "state", ",", "compute_env_order", ")", ":", "for", "variable", ",", "var_name", "in", "(", "(", "queue_name", ",", "'jobQueueName'", ")", ",", "(", "priority", ",", "'priority'...	46.568182	24.568182
async def iter_all( self, direction: msg.StreamDirection = msg.StreamDirection.Forward, from_position: Optional[Union[msg.Position, msg._PositionSentinel]] = None, batch_size: int = 100, resolve_links: bool = True, require_master: bool = False, correlation_id: Opt...	[ "async", "def", "iter_all", "(", "self", ",", "direction", ":", "msg", ".", "StreamDirection", "=", "msg", ".", "StreamDirection", ".", "Forward", ",", "from_position", ":", "Optional", "[", "Union", "[", "msg", ".", "Position", ",", "msg", ".", "_Position...	37.387097	21.967742
def connect(self, uuid_value, wait=None): """Connect to a specific device by its uuid Attempt to connect to a device that we have previously scanned using its UUID. If wait is not None, then it is used in the same was a scan(wait) to override default wait times with an explicit value. ...	[ "def", "connect", "(", "self", ",", "uuid_value", ",", "wait", "=", "None", ")", ":", "if", "self", ".", "connected", ":", "raise", "HardwareError", "(", "\"Cannot connect when we are already connected\"", ")", "if", "uuid_value", "not", "in", "self", ".", "_s...	40.269231	27.346154
def encipher(self,string): """Encipher string using Foursquare cipher according to initialised key. Punctuation and whitespace are removed from the input. If the input plaintext is not an even number of characters, an 'X' will be appended. Example:: ciphertext = Foursquare(key1='zg...	[ "def", "encipher", "(", "self", ",", "string", ")", ":", "string", "=", "self", ".", "remove_punctuation", "(", "string", ")", "if", "len", "(", "string", ")", "%", "2", "==", "1", ":", "string", "=", "string", "+", "'X'", "ret", "=", "''", "for", ...	43.166667	24.5
def auth(self): """ Auth is used to call the AUTH API of CricketAPI. Access token required for every request call to CricketAPI. Auth functional will post user Cricket API app details to server and return the access token. Return: Access token ...	[ "def", "auth", "(", "self", ")", ":", "if", "not", "self", ".", "store_handler", ".", "has_value", "(", "'access_token'", ")", ":", "params", "=", "{", "}", "params", "[", "\"access_key\"", "]", "=", "self", ".", "access_key", "params", "[", "\"secret_ke...	42.482759	20.482759
def _get_co_from_dump(data): """Return the code objects from the dump.""" # Read py2exe header current = struct.calcsize(b'iiii') metadata = struct.unpack(b'iiii', data[:current]) # check py2exe magic number # assert(metadata[0] == 0x78563412) logging.info("Magic value: %x", metadata[0]) ...	[ "def", "_get_co_from_dump", "(", "data", ")", ":", "# Read py2exe header", "current", "=", "struct", ".", "calcsize", "(", "b'iiii'", ")", "metadata", "=", "struct", ".", "unpack", "(", "b'iiii'", ",", "data", "[", ":", "current", "]", ")", "# check py2exe m...	32.26087	15.043478
def process(self, metric): """ Process a metric by converting metric name to MQTT topic name; the payload is metric and timestamp. """ if not mosquitto: return line = str(metric) topic, value, timestamp = line.split() if len(self.prefix): ...	[ "def", "process", "(", "self", ",", "metric", ")", ":", "if", "not", "mosquitto", ":", "return", "line", "=", "str", "(", "metric", ")", "topic", ",", "value", ",", "timestamp", "=", "line", ".", "split", "(", ")", "if", "len", "(", "self", ".", ...	32.8	19.1
def load_lists(keys=[], values=[], name='NT'): """ Map namedtuples given a pair of key, value lists. """ mapping = dict(zip(keys, values)) return mapper(mapping, _nt_name=name)	[ "def", "load_lists", "(", "keys", "=", "[", "]", ",", "values", "=", "[", "]", ",", "name", "=", "'NT'", ")", ":", "mapping", "=", "dict", "(", "zip", "(", "keys", ",", "values", ")", ")", "return", "mapper", "(", "mapping", ",", "_nt_name", "=",...	46.25	2.5
def pretty_table(rows, header=None): """ Returns a string with a simple pretty table representing the given rows. Rows can be: - Sequences such as lists or tuples - Mappings such as dicts - Any object with a __dict__ attribute (most plain python objects) which is equivalent to passing ...	[ "def", "pretty_table", "(", "rows", ",", "header", "=", "None", ")", ":", "rows2", "=", "[", "]", "if", "header", ":", "header", "=", "ensure_list_if_string", "(", "header", ")", "rows2", ".", "insert", "(", "0", ",", "header", ")", "row_type", "=", ...	34.708333	20.854167
def images(self, tag, images, step=None, rows=None, cols=None): """Saves (rows, cols) tiled images from onp.ndarray. If either rows or cols aren't given, they are determined automatically from the size of the image batch, if neither are given a long column of images is produced. This truncates the imag...	[ "def", "images", "(", "self", ",", "tag", ",", "images", ",", "step", "=", "None", ",", "rows", "=", "None", ",", "cols", "=", "None", ")", ":", "images", "=", "onp", ".", "array", "(", "images", ")", "if", "step", "is", "None", ":", "step", "=...	33.633333	16.6
def sinusoidal_bidirectional(target, num_points=1e2, surface_tension='pore.surface_tension', contact_angle='pore.contact_angle', throat_diameter='throat.diameter', throat_ampl...	[ "def", "sinusoidal_bidirectional", "(", "target", ",", "num_points", "=", "1e2", ",", "surface_tension", "=", "'pore.surface_tension'", ",", "contact_angle", "=", "'pore.contact_angle'", ",", "throat_diameter", "=", "'throat.diameter'", ",", "throat_amplitude", "=", "'t...	43.671429	20.2
def delete_project(self, project_name): """ delete project Unsuccessful opertaion will cause an LogException. :type project_name: string :param project_name: the Project name :return: DeleteProjectResponse :raise: LogException """ headers =...	[ "def", "delete_project", "(", "self", ",", "project_name", ")", ":", "headers", "=", "{", "}", "params", "=", "{", "}", "resource", "=", "\"/\"", "(", "resp", ",", "header", ")", "=", "self", ".", "_send", "(", "\"DELETE\"", ",", "project_name", ",", ...	29.411765	18.647059
def get_most_relevant_words_for_topic(vocab, rel_mat, topic, n=None): """ Get words from `vocab` for `topic` ordered by most to least relevance (Sievert and Shirley 2014) using the relevance matrix `rel_mat` obtained from `get_topic_word_relevance()`. Optionally only return the `n` most relevant words. ...	[ "def", "get_most_relevant_words_for_topic", "(", "vocab", ",", "rel_mat", ",", "topic", ",", "n", "=", "None", ")", ":", "_check_relevant_words_for_topic_args", "(", "vocab", ",", "rel_mat", ",", "topic", ")", "return", "_words_by_score", "(", "vocab", ",", "rel...	57.5	25.75
def search_prod_type_tags(self, ins, type, tags, pipeline): '''Returns the first coincidence...''' return StoredProduct(id=100, content='null.fits', tags={})	[ "def", "search_prod_type_tags", "(", "self", ",", "ins", ",", "type", ",", "tags", ",", "pipeline", ")", ":", "return", "StoredProduct", "(", "id", "=", "100", ",", "content", "=", "'null.fits'", ",", "tags", "=", "{", "}", ")" ]	57	17
def gevent_spawn(self): """ Spawn worker threads (using gevent) """ monkey.patch_all(thread=False) joinall([spawn(self.gevent_worker) for x in range(self.queue_worker_amount)])	[ "def", "gevent_spawn", "(", "self", ")", ":", "monkey", ".", "patch_all", "(", "thread", "=", "False", ")", "joinall", "(", "[", "spawn", "(", "self", ".", "gevent_worker", ")", "for", "x", "in", "range", "(", "self", ".", "queue_worker_amount", ")", "...	49.25	16
def densenet121(num_classes=1000, pretrained='imagenet'): r"""Densenet-121 model from `"Densely Connected Convolutional Networks" <https://arxiv.org/pdf/1608.06993.pdf>` """ model = models.densenet121(pretrained=False) if pretrained is not None: settings = pretrained_settings['densenet121'][...	[ "def", "densenet121", "(", "num_classes", "=", "1000", ",", "pretrained", "=", "'imagenet'", ")", ":", "model", "=", "models", ".", "densenet121", "(", "pretrained", "=", "False", ")", "if", "pretrained", "is", "not", "None", ":", "settings", "=", "pretrai...	43.7	15.7
def get_nfc_chars(self): """ Returns the set of IPA symbols that are precomposed (decomposable) chars. These should not be decomposed during string normalisation, because they will not be recognised otherwise. In IPA 2015 there is only one precomposed character: ç, the voiceless palatal fricative. """ ...	[ "def", "get_nfc_chars", "(", "self", ")", ":", "ex", "=", "[", "]", "for", "char", "in", "self", ".", "ipa", ".", "keys", "(", ")", ":", "if", "len", "(", "char", ")", "==", "1", ":", "decomp", "=", "unicodedata", ".", "normalize", "(", "'NFD'", ...	26.444444	21
def cyl_to_spher(R,Z, phi): """ NAME: cyl_to_spher PURPOSE: convert from cylindrical to spherical coordinates INPUT: R, Z, phi- cylindrical coordinates OUTPUT: R, theta, phi - spherical coordinates HISTORY: 2016-05-16 - Written - Aladdin """ t...	[ "def", "cyl_to_spher", "(", "R", ",", "Z", ",", "phi", ")", ":", "theta", "=", "nu", ".", "arctan2", "(", "R", ",", "Z", ")", "r", "=", "(", "R", "", "2", "+", "Z", "", "2", ")", "**", ".5", "return", "(", "r", ",", "theta", ",", "phi...	14.230769	24.846154
def version(names, kwargs): ''' Returns a string representing the package version or an empty string if not installed. If more than one package name is specified, a dict of name/version pairs is returned. CLI Example: .. code-block:: bash salt '' pkg.version <package name> ...	[ "def", "version", "(", "", "names", ",", "", "*", "kwargs", ")", ":", "if", "len", "(", "names", ")", "==", "1", ":", "vers", "=", "__proxy__", "[", "'dummy.package_status'", "]", "(", "names", "[", "0", "]", ")", "return", "vers", "[", "names", ...	29.318182	22.318182
def duplicate_pvd(self): # type: () -> None ''' A method to add a duplicate PVD to the ISO. This is a mostly useless feature allowed by Ecma-119 to have duplicate PVDs to avoid possible corruption. Parameters: None. Returns: Nothing. ''...	[ "def", "duplicate_pvd", "(", "self", ")", ":", "# type: () -> None", "if", "not", "self", ".", "_initialized", ":", "raise", "pycdlibexception", ".", "PyCdlibInvalidInput", "(", "'This object is not yet initialized; call either open() or new() to create an ISO'", ")", "pvd", ...	34.1	29.6
def config_loader(app, **kwargs_config): """Configuration loader. Adds support for loading templates from the Flask application's instance folder (``<instance_folder>/templates``). """ # This is the only place customize the Flask application right after # it has been created, but before all ext...	[ "def", "config_loader", "(", "app", ",", "", "", "kwargs_config", ")", ":", "# This is the only place customize the Flask application right after", "# it has been created, but before all extensions etc are loaded.", "local_templates_path", "=", "os", ".", "path", ".", "join", ...	36.041667	17.666667
async def read(self, amt=None): """Read at most amt bytes from the stream. If the amt argument is omitted, read all data. """ # botocore to aiohttp mapping chunk = await self.__wrapped__.read(amt if amt is not None else -1) self._self_amount_read += len(chunk) if...	[ "async", "def", "read", "(", "self", ",", "amt", "=", "None", ")", ":", "# botocore to aiohttp mapping", "chunk", "=", "await", "self", ".", "__wrapped__", ".", "read", "(", "amt", "if", "amt", "is", "not", "None", "else", "-", "1", ")", "self", ".", ...	41.214286	12.857143
def create_relationship(self, relationship_form=None): """Creates a new ``Relationship``. arg: relationship_form (osid.relationship.RelationshipForm): the form for this ``Relationship`` return: (osid.relationship.Relationship) - the new ``Relationship`` ...	[ "def", "create_relationship", "(", "self", ",", "relationship_form", "=", "None", ")", ":", "if", "relationship_form", "is", "None", ":", "raise", "NullArgument", "(", ")", "if", "not", "isinstance", "(", "relationship_form", ",", "abc_relationship_objects", ".", ...	49.341463	22.341463
def com_google_fonts_check_metadata_match_weight_postscript(font_metadata): """METADATA.pb weight matches postScriptName.""" WEIGHTS = { "Thin": 100, "ThinItalic": 100, "ExtraLight": 200, "ExtraLightItalic": 200, "Light": 300, "LightItalic": 300, "Regular": 400, "Italic": 400, "M...	[ "def", "com_google_fonts_check_metadata_match_weight_postscript", "(", "font_metadata", ")", ":", "WEIGHTS", "=", "{", "\"Thin\"", ":", "100", ",", "\"ThinItalic\"", ":", "100", ",", "\"ExtraLight\"", ":", "200", ",", "\"ExtraLightItalic\"", ":", "200", ",", "\"Ligh...	32.219512	19
def OnTimeToClose(self, evt): """Event handler for the button click.""" print("See ya later!") sys.stdout.flush() self.cleanup_consoles(evt) self.Close() # Not sure why, but our IPython kernel seems to prevent normal WX # shutdown, so an explicit exit() call is ne...	[ "def", "OnTimeToClose", "(", "self", ",", "evt", ")", ":", "print", "(", "\"See ya later!\"", ")", "sys", ".", "stdout", ".", "flush", "(", ")", "self", ".", "cleanup_consoles", "(", "evt", ")", "self", ".", "Close", "(", ")", "# Not sure why, but our IPyt...	37.333333	14.777778
def parse_form_action_url(html, parser=None): """Parse <form action="(.+)"> url :param html: str: raw html text :param parser: bs4.BeautifulSoup: html parser :return: url str: for example: /login.php?act=security_check&to=&hash=12346 """ if parser is None: parser = bs4.BeautifulSoup(htm...	[ "def", "parse_form_action_url", "(", "html", ",", "parser", "=", "None", ")", ":", "if", "parser", "is", "None", ":", "parser", "=", "bs4", ".", "BeautifulSoup", "(", "html", ",", "'html.parser'", ")", "forms", "=", "parser", ".", "find_all", "(", "'form...	35.470588	18.882353
def filter(self, source_file, encoding): # noqa A001 """Parse XML file.""" sources = [] for content, filename, enc in self.get_content(source_file): self.additional_context = self.get_context(filename) sources.extend(self._filter(content, source_file, enc)) retu...	[ "def", "filter", "(", "self", ",", "source_file", ",", "encoding", ")", ":", "# noqa A001", "sources", "=", "[", "]", "for", "content", ",", "filename", ",", "enc", "in", "self", ".", "get_content", "(", "source_file", ")", ":", "self", ".", "additional_...	40.375	21.25
def linkCustomerToVerifiedUser(sender, **kwargs): """ If a Registration is processed in which the associated Customer does not yet have a User, then check to see if the Customer's email address has been verified as belonging to a specific User, and if that User has an associated Customer. If such a...	[ "def", "linkCustomerToVerifiedUser", "(", "sender", ",", "", "", "kwargs", ")", ":", "registration", "=", "kwargs", ".", "get", "(", "'registration'", ",", "None", ")", "if", "not", "registration", "or", "(", "hasattr", "(", "registration", ".", "customer"...	46.466667	27.933333
def make_temp_path(path, new_ext=None): """ Arguments: new_ext: the new file extension, including the leading dot. Defaults to preserving the existing file extension. """ root, ext = os.path.splitext(path) if new_ext is None: new_ext = ext temp_path = root + TEMP_EXTENSIO...	[ "def", "make_temp_path", "(", "path", ",", "new_ext", "=", "None", ")", ":", "root", ",", "ext", "=", "os", ".", "path", ".", "splitext", "(", "path", ")", "if", "new_ext", "is", "None", ":", "new_ext", "=", "ext", "temp_path", "=", "root", "+", "T...	26.153846	16.615385
def runQueryWithRetry(self, args, *kw): """ Run a database query, like with dbpool.runQuery, but retry the query in case of a temporary error (like connection lost). This is needed to be robust against things like database connection idle timeouts.""" def runQuery(txn...	[ "def", "runQueryWithRetry", "(", "self", ",", "", "args", ",", "", "", "kw", ")", ":", "def", "runQuery", "(", "txn", ",", "", "args", ",", "", "", "kw", ")", ":", "txn", ".", "execute", "(", "", "args", ",", "", "*", "kw", ")", "retu...	35.538462	19.230769
def copy(self, tagname, *kwargs): """ Returns a new instance of `TagWrap` using the given tagname* that has all the same attributes as this instance. If kwargs is given they will override the attributes of the created instance. """ new_kwargs = { 'replace...	[ "def", "copy", "(", "self", ",", "tagname", ",", "", "", "kwargs", ")", ":", "new_kwargs", "=", "{", "'replacement'", ":", "self", ".", "replacement", ",", "'whitelist'", ":", "self", ".", "whitelist", ",", "'safe_mode'", ":", "self", ".", "safe_mode",...	39.666667	11.533333
def sort_index(self, ascending=True): """Sort the index of the DataFrame. Currently MultiIndex is not supported since Weld is missing multiple-column sort. Note this is an expensive operation (brings all data to Weld). Parameters ---------- ascending : bool, optional ...	[ "def", "sort_index", "(", "self", ",", "ascending", "=", "True", ")", ":", "if", "isinstance", "(", "self", ".", "index", ",", "MultiIndex", ")", ":", "raise", "NotImplementedError", "(", "'Weld does not yet support sorting on multiple columns'", ")", "return", "s...	29.952381	26.047619
def get_url(request, application, roles, label=None): """ Retrieve a link that will work for the current user. """ args = [] if label is not None: args.append(label) # don't use secret_token unless we have to if 'is_admin' in roles: # Administrators can access anything without secre...	[ "def", "get_url", "(", "request", ",", "application", ",", "roles", ",", "label", "=", "None", ")", ":", "args", "=", "[", "]", "if", "label", "is", "not", "None", ":", "args", ".", "append", "(", "label", ")", "# don't use secret_token unless we have to",...	38.514286	18.457143
def feed(self, data): """Consume some data and advances the state as necessary. :param str data: a blob of data to feed from. """ send = self._send_to_parser draw = self.listener.draw match_text = self._text_pattern.match taking_plain_text = self._taking_plain_te...	[ "def", "feed", "(", "self", ",", "data", ")", ":", "send", "=", "self", ".", "_send_to_parser", "draw", "=", "self", ".", "listener", ".", "draw", "match_text", "=", "self", ".", "_text_pattern", ".", "match", "taking_plain_text", "=", "self", ".", "_tak...	32.48	14.56
def has_cjk(self): """Checks if the word of the chunk contains CJK characters. This is using unicode codepoint ranges from https://github.com/nltk/nltk/blob/develop/nltk/tokenize/util.py#L149 Returns: bool: True if the chunk has any CJK character. """ cjk_codepoint_ranges = [ (43...	[ "def", "has_cjk", "(", "self", ")", ":", "cjk_codepoint_ranges", "=", "[", "(", "4352", ",", "4607", ")", ",", "(", "11904", ",", "42191", ")", ",", "(", "43072", ",", "43135", ")", ",", "(", "44032", ",", "55215", ")", ",", "(", "63744", ",", ...	35.058824	19.411765
def supports_coordinate_type(self, coordinate_type=None): """Tests if the given coordinate type is supported. arg: coordinate_type (osid.type.Type): a coordinate Type return: (boolean) - ``true`` if the type is supported, ``false`` otherwise raise: IllegalState - syn...	[ "def", "supports_coordinate_type", "(", "self", ",", "coordinate_type", "=", "None", ")", ":", "# Implemented from template for osid.Metadata.supports_coordinate_type", "from", ".", "osid_errors", "import", "IllegalState", ",", "NullArgument", "if", "not", "coordinate_type", ...	49.388889	21.5
def send_output(self, value, stdout): """Write the output or value of the expression back to user. >>> 5 5 >>> print('cash rules everything around me') cash rules everything around me """ writer = self.writer if value is not None: writer.wri...	[ "def", "send_output", "(", "self", ",", "value", ",", "stdout", ")", ":", "writer", "=", "self", ".", "writer", "if", "value", "is", "not", "None", ":", "writer", ".", "write", "(", "'{!r}\\n'", ".", "format", "(", "value", ")", ".", "encode", "(", ...	24.833333	19.777778
def find_projects(self, file_identifier=".project"): """ Search all directory recursively for subdirs with `file_identifier' in it. :type file_identifier: str :param file_identifier: File identier, .project by default. :rtype: list :return: The list of subdirs with a `f...	[ "def", "find_projects", "(", "self", ",", "file_identifier", "=", "\".project\"", ")", ":", "projects", "=", "[", "]", "for", "d", "in", "self", ".", "subdirs", "(", ")", ":", "project_file", "=", "os", ".", "path", ".", "join", "(", "self", ".", "di...	33.764706	17.941176
def private_config_content(self, private_config): """ Update the private config :param private_config: content of the private configuration file """ try: private_config_path = os.path.join(self.working_dir, "private-config.cfg") if private_config is Non...	[ "def", "private_config_content", "(", "self", ",", "private_config", ")", ":", "try", ":", "private_config_path", "=", "os", ".", "path", ".", "join", "(", "self", ".", "working_dir", ",", "\"private-config.cfg\"", ")", "if", "private_config", "is", "None", ":...	36.92	23.24
def run(self, grid=None, num_of_paths=2000, seed=0, num_of_workers=CPU_COUNT, profiling=False): """ implements simulation :param list(date) grid: list of Monte Carlo grid dates :param int num_of_paths: number of Monte Carlo paths :param hashable seed: seed used for rnds initiali...	[ "def", "run", "(", "self", ",", "grid", "=", "None", ",", "num_of_paths", "=", "2000", ",", "seed", "=", "0", ",", "num_of_workers", "=", "CPU_COUNT", ",", "profiling", "=", "False", ")", ":", "self", ".", "grid", "=", "sorted", "(", "set", "(", "g...	44.534483	21.465517
def static(self, uri, file_or_directory, args, *kwargs): """Create a blueprint static route from a decorated function. :param uri: endpoint at which the route will be accessible. :param file_or_directory: Static asset. """ static = FutureStatic(uri, file_or_directory, args, kw...	[ "def", "static", "(", "self", ",", "uri", ",", "file_or_directory", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "static", "=", "FutureStatic", "(", "uri", ",", "file_or_directory", ",", "args", ",", "kwargs", ")", "self", ".", "statics", ".", ...	44.25	15.5
def build_parameters(self): """ Build the CLI command line from the parameter values. :return: list of CLI strings -- not escaped! :rtype: list[str] """ param_bits = [] for name in self.parameters: param_bits.extend(self.build_parameter_by_name(name) ...	[ "def", "build_parameters", "(", "self", ")", ":", "param_bits", "=", "[", "]", "for", "name", "in", "self", ".", "parameters", ":", "param_bits", ".", "extend", "(", "self", ".", "build_parameter_by_name", "(", "name", ")", "or", "[", "]", ")", "return",...	31.090909	15.272727
def copy(self): """ Return a new :class:`~pywbem.CIMParameter` object that is a copy of this CIM parameter. This is a middle-deep copy; any mutable types in attributes except the following are copied, so besides these exceptions, modifications of the original object will...	[ "def", "copy", "(", "self", ")", ":", "return", "CIMParameter", "(", "self", ".", "name", ",", "self", ".", "type", ",", "reference_class", "=", "self", ".", "reference_class", ",", "is_array", "=", "self", ".", "is_array", ",", "array_size", "=", "self"...	41.142857	20.357143
def _Rforce(self,R,z,phi=0.,t=0.): """ NAME: _Rforce PURPOSE: evaluate the radial force for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT: ...	[ "def", "_Rforce", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ")", ":", "l", ",", "n", "=", "bovy_coords", ".", "Rz_to_lambdanu", "(", "R", ",", "z", ",", "ac", "=", "self", ".", "_ac", ",", "Delta", "=", "s...	32.227273	15.954545
def delete_key(self, key_name, headers=None, version_id=None, mfa_token=None, callback=None): """ Deletes a key from the bucket. If a version_id is provided, only that version of the key will be deleted. :type key_name: string :param key_name: The key...	[ "def", "delete_key", "(", "self", ",", "key_name", ",", "headers", "=", "None", ",", "version_id", "=", "None", ",", "mfa_token", "=", "None", ",", "callback", "=", "None", ")", ":", "provider", "=", "self", ".", "connection", ".", "provider", "if", "v...	43.846154	18.25641
def get(self, key, func=None, args=(), kwargs=None, **opts): """Manually retrieve a value from the cache, calculating as needed. Params: key -> string to store/retrieve value from. func -> callable to generate value if it does not exist, or has expired. ...	[ "def", "get", "(", "self", ",", "key", ",", "func", "=", "None", ",", "args", "=", "(", ")", ",", "kwargs", "=", "None", ",", "", "", "opts", ")", ":", "kwargs", "=", "kwargs", "or", "{", "}", "key", ",", "store", "=", "self", ".", "_expand...	38.655738	24.229508
def cnst_AT(self, Y): r"""Compute :math:`A^T \mathbf{y}`. In this case :math:`A^T \mathbf{y} = (I \;\; \Gamma_0^T \;\; \Gamma_1^T \;\; \ldots) \mathbf{y}`. """ return self.cnst_A0T(self.block_sep0(Y)) + \ np.sum(self.cnst_A1T(self.block_sep1(Y)), axis=-1)	[ "def", "cnst_AT", "(", "self", ",", "Y", ")", ":", "return", "self", ".", "cnst_A0T", "(", "self", ".", "block_sep0", "(", "Y", ")", ")", "+", "np", ".", "sum", "(", "self", ".", "cnst_A1T", "(", "self", ".", "block_sep1", "(", "Y", ")", ")", "...	37.625	17
def add_adjust(self, data, prehashed=False): """Add a new leaf, and adjust the tree, without rebuilding the whole thing. """ subtrees = self._get_whole_subtrees() new_node = Node(data, prehashed=prehashed) self.leaves.append(new_node) for node in reversed(subtrees): ...	[ "def", "add_adjust", "(", "self", ",", "data", ",", "prehashed", "=", "False", ")", ":", "subtrees", "=", "self", ".", "_get_whole_subtrees", "(", ")", "new_node", "=", "Node", "(", "data", ",", "prehashed", "=", "prehashed", ")", "self", ".", "leaves", ...	45.071429	7.5
def roc_values(fg_vals, bg_vals): """ Return fpr (x) and tpr (y) of the ROC curve. Parameters ---------- fg_vals : array_like The list of values for the positive set. bg_vals : array_like The list of values for the negative set. Returns ------- fpr : array ...	[ "def", "roc_values", "(", "fg_vals", ",", "bg_vals", ")", ":", "if", "len", "(", "fg_vals", ")", "==", "0", ":", "return", "0", "y_true", ",", "y_score", "=", "values_to_labels", "(", "fg_vals", ",", "bg_vals", ")", "fpr", ",", "tpr", ",", "_thresholds...	20.62963	20.925926
def load_from_file(swag_path, swag_type='yml', root_path=None): """ Load specs from YAML file """ if swag_type not in ('yaml', 'yml'): raise AttributeError("Currently only yaml or yml supported") # TODO: support JSON try: enc = detect_by_bom(swag_path) with codecs.op...	[ "def", "load_from_file", "(", "swag_path", ",", "swag_type", "=", "'yml'", ",", "root_path", "=", "None", ")", ":", "if", "swag_type", "not", "in", "(", "'yaml'", ",", "'yml'", ")", ":", "raise", "AttributeError", "(", "\"Currently only yaml or yml supported\"",...	40.771429	14.942857
def _from_dict(cls, _dict): """Initialize a UtteranceAnalyses object from a json dictionary.""" args = {} if 'utterances_tone' in _dict: args['utterances_tone'] = [ UtteranceAnalysis._from_dict(x) for x in (_dict.get('utterances_tone')) ] ...	[ "def", "_from_dict", "(", "cls", ",", "_dict", ")", ":", "args", "=", "{", "}", "if", "'utterances_tone'", "in", "_dict", ":", "args", "[", "'utterances_tone'", "]", "=", "[", "UtteranceAnalysis", ".", "_from_dict", "(", "x", ")", "for", "x", "in", "("...	37.666667	16
def get(key, default=-1): """Backport support for original codes.""" if isinstance(key, int): return Setting(key) if key not in Setting._member_map_: extend_enum(Setting, key, default) return Setting[key]	[ "def", "get", "(", "key", ",", "default", "=", "-", "1", ")", ":", "if", "isinstance", "(", "key", ",", "int", ")", ":", "return", "Setting", "(", "key", ")", "if", "key", "not", "in", "Setting", ".", "_member_map_", ":", "extend_enum", "(", "Setti...	36.285714	7.714286
def auto_load_app_modules(self, modules): """Auto load app modules""" for app in apps.get_app_configs(): for module in modules: try: import_module('{}.{}'.format(app.module.__package__, module)) except ImportError: pass	[ "def", "auto_load_app_modules", "(", "self", ",", "modules", ")", ":", "for", "app", "in", "apps", ".", "get_app_configs", "(", ")", ":", "for", "module", "in", "modules", ":", "try", ":", "import_module", "(", "'{}.{}'", ".", "format", "(", "app", ".", ...	39	11.375
def isheader(self, line): """Determine whether a given line is a legal header. This method should return the header name, suitably canonicalized. You may override this method in order to use Message parsing on tagged data in RFC 2822-like formats with special header formats. """...	[ "def", "isheader", "(", "self", ",", "line", ")", ":", "i", "=", "line", ".", "find", "(", "':'", ")", "if", "i", ">", "-", "1", ":", "return", "line", "[", ":", "i", "]", ".", "lower", "(", ")", "return", "None" ]	37.454545	19.545455
def check_class(obj, target_class, allow_none = False): """ Checks that the obj is a (sub)type of target_class. Raises a TypeError if this is not the case. :param obj: object whos type is to be checked :type obj: any type :param target_class: target type/class :type target_...	[ "def", "check_class", "(", "obj", ",", "target_class", ",", "allow_none", "=", "False", ")", ":", "if", "not", "isinstance", "(", "obj", ",", "target_class", ")", ":", "if", "not", "(", "allow_none", "and", "obj", "is", "None", ")", ":", "raise", "Type...	42.4	11.266667
def imagetransformerpp_base_14l_8h_big_uncond_dr03_dan_p(): """Gets to 2.92 in just under 4 days on 8 p100s.""" hparams = imagetransformerpp_base_12l_8h_big_uncond_dr03_dan_l() hparams.num_decoder_layers = 14 hparams.batch_size = 8 hparams.layer_prepostprocess_dropout = 0.2 return hparams	[ "def", "imagetransformerpp_base_14l_8h_big_uncond_dr03_dan_p", "(", ")", ":", "hparams", "=", "imagetransformerpp_base_12l_8h_big_uncond_dr03_dan_l", "(", ")", "hparams", ".", "num_decoder_layers", "=", "14", "hparams", ".", "batch_size", "=", "8", "hparams", ".", "layer_...	42.142857	13.714286
def grow(self, amount): """Spawn new worker threads (not above self.max).""" if self.max > 0: budget = max(self.max - len(self._threads), 0) else: # self.max <= 0 indicates no maximum budget = float('inf') n_new = min(amount, budget) workers ...	[ "def", "grow", "(", "self", ",", "amount", ")", ":", "if", "self", ".", "max", ">", "0", ":", "budget", "=", "max", "(", "self", ".", "max", "-", "len", "(", "self", ".", "_threads", ")", ",", "0", ")", "else", ":", "# self.max <= 0 indicates no ma...	34.071429	16.785714
def get_sec_project_activity(self): """ Generate the "project activity" section of the report. """ logger.debug("Calculating Project Activity metrics.") data_path = os.path.join(self.data_dir, "activity") if not os.path.exists(data_path): os.makedirs(data_pa...	[ "def", "get_sec_project_activity", "(", "self", ")", ":", "logger", ".", "debug", "(", "\"Calculating Project Activity metrics.\"", ")", "data_path", "=", "os", ".", "path", ".", "join", "(", "self", ".", "data_dir", ",", "\"activity\"", ")", "if", "not", "os"...	43.16129	19.806452
def bind_expression_to_resources(expr, resources): """ Bind a Blaze expression to resources. Parameters ---------- expr : bz.Expr The expression to which we want to bind resources. resources : dict[bz.Symbol -> any] Mapping from the loadable terms of ``expr`` to actual data reso...	[ "def", "bind_expression_to_resources", "(", "expr", ",", "resources", ")", ":", "# bind the resources into the expression", "if", "resources", "is", "None", ":", "resources", "=", "{", "}", "# _subs stands for substitute. It's not actually private, blaze just", "# prefixes sym...	30.076923	20
def inflate_to_one_hot(tensor, classes): """ Converts a tensor with index form to a one hot tensor. :param tensor: A tensor of shape [batch, h, w, 1] :param classes: The number of classes that exist. (length of one hot encoding) :return: A tensor of shape [batch, h, w, classes]. """ one_hot ...	[ "def", "inflate_to_one_hot", "(", "tensor", ",", "classes", ")", ":", "one_hot", "=", "tf", ".", "one_hot", "(", "tensor", ",", "classes", ")", "shape", "=", "one_hot", ".", "get_shape", "(", ")", ".", "as_list", "(", ")", "return", "tf", ".", "reshape...	45.5	12.1
def encode(self, word): """Return the MRA personal numeric identifier (PNI) for a word. Parameters ---------- word : str The word to transform Returns ------- str The MRA PNI Examples -------- >>> pe = MRA() ...	[ "def", "encode", "(", "self", ",", "word", ")", ":", "if", "not", "word", ":", "return", "word", "word", "=", "word", ".", "upper", "(", ")", "word", "=", "word", ".", "replace", "(", "'ß',", " ", "SS')", "", "word", "=", "word", "[", "0", "]",...	22.702703	19.027027
def main(): """The main function of the script""" desc = 'Benchmark the files generated by generate.py' parser = argparse.ArgumentParser(description=desc) parser.add_argument( '--src', dest='src_dir', default='generated', help='The directory containing the sources to benc...	[ "def", "main", "(", ")", ":", "desc", "=", "'Benchmark the files generated by generate.py'", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "desc", ")", "parser", ".", "add_argument", "(", "'--src'", ",", "dest", "=", "'src_dir'", ","...	27.018868	20.584906
def GetValueLength(rd, pos): """Get value length for a key in rd. For a key at position pos in the Report Descriptor rd, return the length of the associated value. This supports both short and long format values. Args: rd: Report Descriptor pos: The position of the key in rd. Returns: (key_s...	[ "def", "GetValueLength", "(", "rd", ",", "pos", ")", ":", "rd", "=", "bytearray", "(", "rd", ")", "key", "=", "rd", "[", "pos", "]", "if", "key", "==", "LONG_ITEM_ENCODING", ":", "# If the key is tagged as a long item (0xfe), then the format is", "# [key (1 byte)]...	33.157895	23.710526
def _run_systemdrun_decide(self): """ Internal method decide if it is possible to use --wait option to systemd for example RHEL7 does not support --wait option :return: bool """ if self.systemd_wait_support is None: self.systemd_wait_support = "--wait...	[ "def", "_run_systemdrun_decide", "(", "self", ")", ":", "if", "self", ".", "systemd_wait_support", "is", "None", ":", "self", ".", "systemd_wait_support", "=", "\"--wait\"", "in", "run_cmd", "(", "[", "\"systemd-run\"", ",", "\"--help\"", "]", ",", "return_outpu...	35.5	14.166667
def add_color_stop_rgba(self, offset, red, green, blue, alpha=1): """Adds a translucent color stop to a gradient pattern. The offset specifies the location along the gradient's control vector. For example, a linear gradient's control vector is from (x0,y0) to (x1,y1) while a rad...	[ "def", "add_color_stop_rgba", "(", "self", ",", "offset", ",", "red", ",", "green", ",", "blue", ",", "alpha", "=", "1", ")", ":", "cairo", ".", "cairo_pattern_add_color_stop_rgba", "(", "self", ".", "_pointer", ",", "offset", ",", "red", ",", "green", "...	40.891892	19.378378
def _TempRootPath(): """Returns a default root path for storing temporary files.""" # `FLAGS.test_tmpdir` is defined only in test environment, so we can't expect # for it to be always defined. test_tmpdir = ( compatibility.Environ("TEST_TMPDIR", default=None) or FLAGS.get_flag_value("test_tmpdir", d...	[ "def", "_TempRootPath", "(", ")", ":", "# `FLAGS.test_tmpdir` is defined only in test environment, so we can't expect", "# for it to be always defined.", "test_tmpdir", "=", "(", "compatibility", ".", "Environ", "(", "\"TEST_TMPDIR\"", ",", "default", "=", "None", ")", "or", ...	38	22.5
def create_swag_from_ctx(ctx): """Creates SWAG client from the current context.""" swag_opts = {} if ctx.type == 'file': swag_opts = { 'swag.type': 'file', 'swag.data_dir': ctx.data_dir, 'swag.data_file': ctx.data_file } elif ctx.type == 's3': ...	[ "def", "create_swag_from_ctx", "(", "ctx", ")", ":", "swag_opts", "=", "{", "}", "if", "ctx", ".", "type", "==", "'file'", ":", "swag_opts", "=", "{", "'swag.type'", ":", "'file'", ",", "'swag.data_dir'", ":", "ctx", ".", "data_dir", ",", "'swag.data_file'...	31.272727	12.954545
def parse_bowtie_stats(self, stats_file): """ Parses Bowtie2 stats file, returns series with values. :param str stats_file: Bowtie2 output file with alignment statistics. """ import pandas as pd stats = pd.Series(index=["readCount", "unpaired", "unaligned", "unique", "mu...	[ "def", "parse_bowtie_stats", "(", "self", ",", "stats_file", ")", ":", "import", "pandas", "as", "pd", "stats", "=", "pd", ".", "Series", "(", "index", "=", "[", "\"readCount\"", ",", "\"unpaired\"", ",", "\"unaligned\"", ",", "\"unique\"", ",", "\"multiple\...	57.909091	32.636364
def has_dynamic_getattr(self, context=None): """Check if the class has a custom __getattr__ or __getattribute__. If any such method is found and it is not from builtins, nor from an extension module, then the function will return True. :returns: True if the class has a custom ...	[ "def", "has_dynamic_getattr", "(", "self", ",", "context", "=", "None", ")", ":", "def", "_valid_getattr", "(", "node", ")", ":", "root", "=", "node", ".", "root", "(", ")", "return", "root", ".", "name", "!=", "BUILTINS", "and", "getattr", "(", "root"...	37.923077	21.076923
def download_pojo(self, path="", get_genmodel_jar=False, genmodel_name=""): """ Download the POJO for this model to the directory specified by path. If path is an empty string, then dump the output to screen. :param path: An absolute path to the directory where POJO should be saved. ...	[ "def", "download_pojo", "(", "self", ",", "path", "=", "\"\"", ",", "get_genmodel_jar", "=", "False", ",", "genmodel_name", "=", "\"\"", ")", ":", "assert_is_type", "(", "path", ",", "str", ")", "assert_is_type", "(", "get_genmodel_jar", ",", "bool", ")", ...	49.4	26.066667
def get_dev_vlans(devid, auth, url): """Function takes input of devID to issue RESTUL call to HP IMC :param devid: requires devId as the only input parameter :return: dictionary of existing vlans on the devices. Device must be supported in HP IMC platform VLAN manager module """ # checks to see if ...	[ "def", "get_dev_vlans", "(", "devid", ",", "auth", ",", "url", ")", ":", "# checks to see if the imc credentials are already available", "get_dev_vlans_url", "=", "\"/imcrs/vlan?devId=\"", "+", "str", "(", "devid", ")", "+", "\"&start=0&size=5000&total=false\"", "f_url", ...	45	20.619048
async def _handle_metrics(self, request: Request) -> Response: """Handler for metrics.""" if self._update_handler: await self._update_handler(self.registry.get_metrics()) response = Response(body=self.registry.generate_metrics()) response.content_type = CONTENT_TYPE_LATEST ...	[ "async", "def", "_handle_metrics", "(", "self", ",", "request", ":", "Request", ")", "->", "Response", ":", "if", "self", ".", "_update_handler", ":", "await", "self", ".", "_update_handler", "(", "self", ".", "registry", ".", "get_metrics", "(", ")", ")",...	47.857143	15.857143
def match_many(self, models, results, relation): """ Match the eargerly loaded resuls to their single parents. :param models: The parents :type models: list :param results: The results collection :type results: Collection :param relation: The relation :...	[ "def", "match_many", "(", "self", ",", "models", ",", "results", ",", "relation", ")", ":", "return", "self", ".", "_match_one_or_many", "(", "models", ",", "results", ",", "relation", ",", "'many'", ")" ]	26.9375	18.4375
def has_command(self, command): """Returns True if any of the plugins have the given command.""" for pbt in self._plugins.values(): if pbt.command == command: return True return False	[ "def", "has_command", "(", "self", ",", "command", ")", ":", "for", "pbt", "in", "self", ".", "_plugins", ".", "values", "(", ")", ":", "if", "pbt", ".", "command", "==", "command", ":", "return", "True", "return", "False" ]	38.333333	7.666667
def get_tunnel_info_output_tunnel_has_conflicts(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_tunnel_info = ET.Element("get_tunnel_info") config = get_tunnel_info output = ET.SubElement(get_tunnel_info, "output") tunnel = ET.SubElem...	[ "def", "get_tunnel_info_output_tunnel_has_conflicts", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "get_tunnel_info", "=", "ET", ".", "Element", "(", "\"get_tunnel_info\"", ")", "config", "=", "ge...	40.333333	13.583333
def nextPlot(self): """Moves the displayed plot to the next one""" if self.stacker.currentIndex() < self.stacker.count(): self.stacker.setCurrentIndex(self.stacker.currentIndex()+1)	[ "def", "nextPlot", "(", "self", ")", ":", "if", "self", ".", "stacker", ".", "currentIndex", "(", ")", "<", "self", ".", "stacker", ".", "count", "(", ")", ":", "self", ".", "stacker", ".", "setCurrentIndex", "(", "self", ".", "stacker", ".", "curren...	51.5	18.5
def check_sas_base_dir(root=None): ''' Check for the SAS_BASE_DIR environment variable Will set the SAS_BASE_DIR in your local environment or prompt you to define one if is undefined Parameters: root (str): Optional override of the SAS_BASE_DIR envvar ''' sasbasedir = root...	[ "def", "check_sas_base_dir", "(", "root", "=", "None", ")", ":", "sasbasedir", "=", "root", "or", "os", ".", "getenv", "(", "\"SAS_BASE_DIR\"", ")", "if", "not", "sasbasedir", ":", "sasbasedir", "=", "input", "(", "'Enter a path for SAS_BASE_DIR: '", ")", "os"...	30.933333	20.666667
def _update_structure_lines(self): '''ATOM and HETATM lines may be altered by function calls. When this happens, this function should be called to keep self.structure_lines up to date.''' structure_lines = [] atom_chain_order = [] chain_atoms = {} for line in self.lines: ...	[ "def", "_update_structure_lines", "(", "self", ")", ":", "structure_lines", "=", "[", "]", "atom_chain_order", "=", "[", "]", "chain_atoms", "=", "{", "}", "for", "line", "in", "self", ".", "lines", ":", "linetype", "=", "line", "[", "0", ":", "6", "]"...	49.357143	22.142857
def build(self, recursive=True): """ Building an assembly buffers the :meth:`components` and :meth:`constraints`. Running ``build()`` is optional, it's automatically run when requesting :meth:`components` or :meth:`constraints`. Mostly it's used to test that there aren't any c...	[ "def", "build", "(", "self", ",", "recursive", "=", "True", ")", ":", "# initialize values", "self", ".", "_components", "=", "{", "}", "self", ".", "_constraints", "=", "[", "]", "def", "genwrap", "(", "obj", ",", "name", ",", "iter_type", "=", "None"...	36.6	20.844444
def removeCodedValue(self, name): """removes a codedValue by name""" for i in self._codedValues: if i['name'] == name: self._codedValues.remove(i) return True return False	[ "def", "removeCodedValue", "(", "self", ",", "name", ")", ":", "for", "i", "in", "self", ".", "_codedValues", ":", "if", "i", "[", "'name'", "]", "==", "name", ":", "self", ".", "_codedValues", ".", "remove", "(", "i", ")", "return", "True", "return"...	33.285714	7.857143
def client_info(self, client): """ Get client info. Uses GET to /clients/<client> interface. :Args: * client: (str) Client's ID :Returns: (dict) Client dictionary """ client = self._client_id(client) response = self._get(url.clients_id.format(id=c...	[ "def", "client_info", "(", "self", ",", "client", ")", ":", "client", "=", "self", ".", "_client_id", "(", "client", ")", "response", "=", "self", ".", "_get", "(", "url", ".", "clients_id", ".", "format", "(", "id", "=", "client", ")", ")", "self", ...	31.230769	13.538462
def get_sensor_data(**kwargs): ''' Get sensor readings Iterates sensor reading objects :param kwargs: - api_host=127.0.0.1 - api_user=admin - api_pass=example - api_port=623 - api_kg=None CLI Example: .. code-block:: bash salt-call ipmi.get_se...	[ "def", "get_sensor_data", "(", "", "", "kwargs", ")", ":", "import", "ast", "with", "_IpmiCommand", "(", "", "", "kwargs", ")", "as", "s", ":", "data", "=", "{", "}", "for", "reading", "in", "s", ".", "get_sensor_data", "(", ")", ":", "if", "re...	22.444444	22
def get_patch_op(self, keypath, value, op='replace'): """ Return an object that describes a change of configuration on the given staging. Setting will be applied on all available HTTP methods. """ if isinstance(value, bool): value = str(value).lower() return {...	[ "def", "get_patch_op", "(", "self", ",", "keypath", ",", "value", ",", "op", "=", "'replace'", ")", ":", "if", "isinstance", "(", "value", ",", "bool", ")", ":", "value", "=", "str", "(", "value", ")", ".", "lower", "(", ")", "return", "{", "'op'",...	46.625	15.625
def next(self): """Return the next match; raises Exception if no next match available""" # Check the state and find the next match as a side-effect if necessary. if not self.has_next(): raise StopIteration("No next match") # Don't retain that memory any longer than necessary....	[ "def", "next", "(", "self", ")", ":", "# Check the state and find the next match as a side-effect if necessary.", "if", "not", "self", ".", "has_next", "(", ")", ":", "raise", "StopIteration", "(", "\"No next match\"", ")", "# Don't retain that memory any longer than necessar...	45.1	14.9
async def profile(self, ctx, platform, name): '''Fetch a profile.''' player = await self.client.get_player(platform, name) solos = await player.get_solos() await ctx.send("# of kills in solos for {}: {}".format(name,solos.kills.value))	[ "async", "def", "profile", "(", "self", ",", "ctx", ",", "platform", ",", "name", ")", ":", "player", "=", "await", "self", ".", "client", ".", "get_player", "(", "platform", ",", "name", ")", "solos", "=", "await", "player", ".", "get_solos", "(", "...	37.571429	23.285714
def __obj2choices(self, values): """ - json list of key, value pairs: Example: [["A", "Option 1 Label"], ["B", "Option 2 Label"]] - space separated string with a list of options: Example: "Option1 Opt2 Opt3" will be converted to a key, value pair of the follow...	[ "def", "__obj2choices", "(", "self", ",", "values", ")", ":", "choices", "=", "values", "# choices from string", "if", "type", "(", "values", ")", "==", "type", "(", "''", ")", ":", "obj", "=", "None", "# try json string", "try", ":", "obj", "=", "json",...	35.083333	11.833333
def estimate_gaussian(X): """ Returns the mean and the variance of a data set of X points assuming that the points come from a gaussian distribution X. """ mean = np.mean(X,0) variance = np.var(X,0) return Gaussian(mean,variance)	[ "def", "estimate_gaussian", "(", "X", ")", ":", "mean", "=", "np", ".", "mean", "(", "X", ",", "0", ")", "variance", "=", "np", ".", "var", "(", "X", ",", "0", ")", "return", "Gaussian", "(", "mean", ",", "variance", ")" ]	31.375	12.625
def filter(self, predicates): """Summary Args: grouping_column_name (TYPE): Description Returns: TYPE: Description """ tys = [] for col_name, raw_column in self.raw_columns.items(): dtype = str(raw_column.dtype) if dtype =...	[ "def", "filter", "(", "self", ",", "predicates", ")", ":", "tys", "=", "[", "]", "for", "col_name", ",", "raw_column", "in", "self", ".", "raw_columns", ".", "items", "(", ")", ":", "dtype", "=", "str", "(", "raw_column", ".", "dtype", ")", "if", "...	27.166667	16.972222
def add_fast(self, filepath, hashfn=None, force=False): """ Bespoke function to add filepaths but set shortcircuit to True, which means only the first calculable hash will be stored. In this way only one "fast" hashing function need be called for each filepath. """ if has...	[ "def", "add_fast", "(", "self", ",", "filepath", ",", "hashfn", "=", "None", ",", "force", "=", "False", ")", ":", "if", "hashfn", "is", "None", ":", "hashfn", "=", "fast_hashes", "self", ".", "add", "(", "filepath", ",", "hashfn", ",", "force", ",",...	46.444444	17.777778
async def heater_control(self, device_id, fan_status=None, power_status=None): """Set heater temps.""" heater = self.heaters.get(device_id) if heater is None: _LOGGER.error("No such device") return if fan_status is None: fa...	[ "async", "def", "heater_control", "(", "self", ",", "device_id", ",", "fan_status", "=", "None", ",", "power_status", "=", "None", ")", ":", "heater", "=", "self", ".", "heaters", ".", "get", "(", "device_id", ")", "if", "heater", "is", "None", ":", "_...	41	7.863636
def _get_metadata(network_id, user_id): """ Get all the metadata in a network, across all scenarios returns a dictionary of dict objects, keyed on dataset ID """ log.info("Getting Metadata") dataset_qry = db.DBSession.query( Dataset ).outerjoin(DatasetOwner, and_(Data...	[ "def", "_get_metadata", "(", "network_id", ",", "user_id", ")", ":", "log", ".", "info", "(", "\"Getting Metadata\"", ")", "dataset_qry", "=", "db", ".", "DBSession", ".", "query", "(", "Dataset", ")", ".", "outerjoin", "(", "DatasetOwner", ",", "and_", "(...	39.542857	22.342857
def user(session, uid, ladder_ids=None): """Get all possible user info by name.""" data = get_user(session, uid) resp = dict(data) if not ladder_ids: return resp resp['ladders'] = {} for ladder_id in ladder_ids: if isinstance(ladder_id, str): ladder_id = lookup_ladder...	[ "def", "user", "(", "session", ",", "uid", ",", "ladder_ids", "=", "None", ")", ":", "data", "=", "get_user", "(", "session", ",", "uid", ")", "resp", "=", "dict", "(", "data", ")", "if", "not", "ladder_ids", ":", "return", "resp", "resp", "[", "'l...	32.705882	14.411765
def execute(self, uri, namespace, action, timeout=2, **kwargs): """Executes a given action with optional arguments. The execution of an action of an UPnP/TR64 device needs more than just the name of an action. It needs the control URI which is called to place the action and also the namespace a...	[ "def", "execute", "(", "self", ",", "uri", ",", "namespace", ",", "action", ",", "timeout", "=", "2", ",", "", "", "kwargs", ")", ":", "if", "not", "uri", ":", "raise", "ValueError", "(", "\"No action URI has been defined.\"", ")", "if", "not", "namesp...	42.03125	30.515625
def likelihood3(args): """ %prog likelihood3 140_20.json 140_70.json Plot the likelihood surface and marginal distributions for two settings. """ from matplotlib import gridspec p = OptionParser(likelihood3.__doc__) opts, args, iopts = p.set_image_options(args, figsize="10x10", ...	[ "def", "likelihood3", "(", "args", ")", ":", "from", "matplotlib", "import", "gridspec", "p", "=", "OptionParser", "(", "likelihood3", ".", "__doc__", ")", "opts", ",", "args", ",", "iopts", "=", "p", ".", "set_image_options", "(", "args", ",", "figsize", ...	31.828571	15.6
def GC_partial(portion): """Manually compute GC content percentage in a DNA string, taking ambiguous values into account (according to standard IUPAC notation). """ sequence_count = collections.Counter(portion) gc = ((sum([sequence_count[i] for i in 'gGcCsS']) + sum([sequence_count[i] for...	[ "def", "GC_partial", "(", "portion", ")", ":", "sequence_count", "=", "collections", ".", "Counter", "(", "portion", ")", "gc", "=", "(", "(", "sum", "(", "[", "sequence_count", "[", "i", "]", "for", "i", "in", "'gGcCsS'", "]", ")", "+", "sum", "(", ...	45.454545	18.909091

def send_to_splunk( session=None, url=None, data=None, headers=None, verify=False, ssl_options=None, timeout=10.0): """send_to_splunk Send formatted msgs to Splunk. This will throw exceptions for any errors. It is decoupled from the publishers to ...

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25.709677

16.612903

def encipher(self,string): """Encipher string using Enigma M3 cipher according to initialised key. Punctuation and whitespace are removed from the input. Example:: ciphertext = Enigma(settings=('A','A','A'),rotors=(1,2,3),reflector='B', ringstellung=('F','V'...

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39.5

19.8

def unpack(self, gpsd_socket_response): """Sets new socket data as DataStream attributes in those initialised dictionaries Arguments: gpsd_socket_response (json object): Provides: self attributes, e.g., self.lat, self.gdop Raises: AttributeError: 'str' object ...

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52.62963

28.740741

def _find_already_built_wheel(metadata_directory): """Check for a wheel already built during the get_wheel_metadata hook. """ if not metadata_directory: return None metadata_parent = os.path.dirname(metadata_directory) if not os.path.isfile(pjoin(metadata_parent, WHEEL_BUILT_MARKER)): ...

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34.3

18.05

def existing_gene(store, panel_obj, hgnc_id): """Check if gene is already added to a panel.""" existing_genes = {gene['hgnc_id']: gene for gene in panel_obj['genes']} return existing_genes.get(hgnc_id)

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52.5

10.5

def create_job_queue(self, queue_name, priority, state, compute_env_order): """ Create a job queue :param queue_name: Queue name :type queue_name: str :param priority: Queue priority :type priority: int :param state: Queue state :type state: string ...

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24.568182

async def iter_all( self, direction: msg.StreamDirection = msg.StreamDirection.Forward, from_position: Optional[Union[msg.Position, msg._PositionSentinel]] = None, batch_size: int = 100, resolve_links: bool = True, require_master: bool = False, correlation_id: Opt...

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37.387097

21.967742

def connect(self, uuid_value, wait=None): """Connect to a specific device by its uuid Attempt to connect to a device that we have previously scanned using its UUID. If wait is not None, then it is used in the same was a scan(wait) to override default wait times with an explicit value. ...

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40.269231

27.346154

def encipher(self,string): """Encipher string using Foursquare cipher according to initialised key. Punctuation and whitespace are removed from the input. If the input plaintext is not an even number of characters, an 'X' will be appended. Example:: ciphertext = Foursquare(key1='zg...

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43.166667

24.5

def auth(self): """ Auth is used to call the AUTH API of CricketAPI. Access token required for every request call to CricketAPI. Auth functional will post user Cricket API app details to server and return the access token. Return: Access token ...

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42.482759

20.482759

def _get_co_from_dump(data): """Return the code objects from the dump.""" # Read py2exe header current = struct.calcsize(b'iiii') metadata = struct.unpack(b'iiii', data[:current]) # check py2exe magic number # assert(metadata[0] == 0x78563412) logging.info("Magic value: %x", metadata[0]) ...

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32.26087

15.043478

def process(self, metric): """ Process a metric by converting metric name to MQTT topic name; the payload is metric and timestamp. """ if not mosquitto: return line = str(metric) topic, value, timestamp = line.split() if len(self.prefix): ...

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32.8

19.1

def load_lists(keys=[], values=[], name='NT'): """ Map namedtuples given a pair of key, value lists. """ mapping = dict(zip(keys, values)) return mapper(mapping, _nt_name=name)

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46.25

2.5

def pretty_table(rows, header=None): """ Returns a string with a simple pretty table representing the given rows. Rows can be: - Sequences such as lists or tuples - Mappings such as dicts - Any object with a __dict__ attribute (most plain python objects) which is equivalent to passing ...

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34.708333

20.854167

def images(self, tag, images, step=None, rows=None, cols=None): """Saves (rows, cols) tiled images from onp.ndarray. If either rows or cols aren't given, they are determined automatically from the size of the image batch, if neither are given a long column of images is produced. This truncates the imag...

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33.633333

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def sinusoidal_bidirectional(target, num_points=1e2, surface_tension='pore.surface_tension', contact_angle='pore.contact_angle', throat_diameter='throat.diameter', throat_ampl...

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43.671429

20.2

def delete_project(self, project_name): """ delete project Unsuccessful opertaion will cause an LogException. :type project_name: string :param project_name: the Project name :return: DeleteProjectResponse :raise: LogException """ headers =...

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29.411765

18.647059

def get_most_relevant_words_for_topic(vocab, rel_mat, topic, n=None): """ Get words from `vocab` for `topic` ordered by most to least relevance (Sievert and Shirley 2014) using the relevance matrix `rel_mat` obtained from `get_topic_word_relevance()`. Optionally only return the `n` most relevant words. ...

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57.5

25.75

def search_prod_type_tags(self, ins, type, tags, pipeline): '''Returns the first coincidence...''' return StoredProduct(id=100, content='null.fits', tags={})

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57

17

def gevent_spawn(self): """ Spawn worker threads (using gevent) """ monkey.patch_all(thread=False) joinall([spawn(self.gevent_worker) for x in range(self.queue_worker_amount)])

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49.25

16

def densenet121(num_classes=1000, pretrained='imagenet'): r"""Densenet-121 model from `"Densely Connected Convolutional Networks" <https://arxiv.org/pdf/1608.06993.pdf>` """ model = models.densenet121(pretrained=False) if pretrained is not None: settings = pretrained_settings['densenet121'][...

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43.7

15.7

def get_nfc_chars(self): """ Returns the set of IPA symbols that are precomposed (decomposable) chars. These should not be decomposed during string normalisation, because they will not be recognised otherwise. In IPA 2015 there is only one precomposed character: ç, the voiceless palatal fricative. """ ...

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26.444444

21

def cyl_to_spher(R,Z, phi): """ NAME: cyl_to_spher PURPOSE: convert from cylindrical to spherical coordinates INPUT: R, Z, phi- cylindrical coordinates OUTPUT: R, theta, phi - spherical coordinates HISTORY: 2016-05-16 - Written - Aladdin """ t...

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14.230769

24.846154

def version(*names, **kwargs): ''' Returns a string representing the package version or an empty string if not installed. If more than one package name is specified, a dict of name/version pairs is returned. CLI Example: .. code-block:: bash salt '*' pkg.version <package name> ...

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29.318182

22.318182

def duplicate_pvd(self): # type: () -> None ''' A method to add a duplicate PVD to the ISO. This is a mostly useless feature allowed by Ecma-119 to have duplicate PVDs to avoid possible corruption. Parameters: None. Returns: Nothing. ''...

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34.1

29.6

def config_loader(app, **kwargs_config): """Configuration loader. Adds support for loading templates from the Flask application's instance folder (``<instance_folder>/templates``). """ # This is the only place customize the Flask application right after # it has been created, but before all ext...

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36.041667

17.666667

async def read(self, amt=None): """Read at most amt bytes from the stream. If the amt argument is omitted, read all data. """ # botocore to aiohttp mapping chunk = await self.__wrapped__.read(amt if amt is not None else -1) self._self_amount_read += len(chunk) if...

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41.214286

12.857143

def create_relationship(self, relationship_form=None): """Creates a new ``Relationship``. arg: relationship_form (osid.relationship.RelationshipForm): the form for this ``Relationship`` return: (osid.relationship.Relationship) - the new ``Relationship`` ...

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49.341463

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def com_google_fonts_check_metadata_match_weight_postscript(font_metadata): """METADATA.pb weight matches postScriptName.""" WEIGHTS = { "Thin": 100, "ThinItalic": 100, "ExtraLight": 200, "ExtraLightItalic": 200, "Light": 300, "LightItalic": 300, "Regular": 400, "Italic": 400, "M...

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def OnTimeToClose(self, evt): """Event handler for the button click.""" print("See ya later!") sys.stdout.flush() self.cleanup_consoles(evt) self.Close() # Not sure why, but our IPython kernel seems to prevent normal WX # shutdown, so an explicit exit() call is ne...

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def parse_form_action_url(html, parser=None): """Parse <form action="(.+)"> url :param html: str: raw html text :param parser: bs4.BeautifulSoup: html parser :return: url str: for example: /login.php?act=security_check&to=&hash=12346 """ if parser is None: parser = bs4.BeautifulSoup(htm...

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def filter(self, source_file, encoding): # noqa A001 """Parse XML file.""" sources = [] for content, filename, enc in self.get_content(source_file): self.additional_context = self.get_context(filename) sources.extend(self._filter(content, source_file, enc)) retu...

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def linkCustomerToVerifiedUser(sender, **kwargs): """ If a Registration is processed in which the associated Customer does not yet have a User, then check to see if the Customer's email address has been verified as belonging to a specific User, and if that User has an associated Customer. If such a...

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def make_temp_path(path, new_ext=None): """ Arguments: new_ext: the new file extension, including the leading dot. Defaults to preserving the existing file extension. """ root, ext = os.path.splitext(path) if new_ext is None: new_ext = ext temp_path = root + TEMP_EXTENSIO...

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def runQueryWithRetry(self, *args, **kw): """ Run a database query, like with dbpool.runQuery, but retry the query in case of a temporary error (like connection lost). This is needed to be robust against things like database connection idle timeouts.""" def runQuery(txn...

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def copy(self, tagname, **kwargs): """ Returns a new instance of `TagWrap` using the given *tagname* that has all the same attributes as this instance. If *kwargs* is given they will override the attributes of the created instance. """ new_kwargs = { 'replace...

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def sort_index(self, ascending=True): """Sort the index of the DataFrame. Currently MultiIndex is not supported since Weld is missing multiple-column sort. Note this is an expensive operation (brings all data to Weld). Parameters ---------- ascending : bool, optional ...

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def get_url(request, application, roles, label=None): """ Retrieve a link that will work for the current user. """ args = [] if label is not None: args.append(label) # don't use secret_token unless we have to if 'is_admin' in roles: # Administrators can access anything without secre...

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def feed(self, data): """Consume some data and advances the state as necessary. :param str data: a blob of data to feed from. """ send = self._send_to_parser draw = self.listener.draw match_text = self._text_pattern.match taking_plain_text = self._taking_plain_te...

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def has_cjk(self): """Checks if the word of the chunk contains CJK characters. This is using unicode codepoint ranges from https://github.com/nltk/nltk/blob/develop/nltk/tokenize/util.py#L149 Returns: bool: True if the chunk has any CJK character. """ cjk_codepoint_ranges = [ (43...

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def supports_coordinate_type(self, coordinate_type=None): """Tests if the given coordinate type is supported. arg: coordinate_type (osid.type.Type): a coordinate Type return: (boolean) - ``true`` if the type is supported, ``false`` otherwise raise: IllegalState - syn...

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def send_output(self, value, stdout): """Write the output or value of the expression back to user. >>> 5 5 >>> print('cash rules everything around me') cash rules everything around me """ writer = self.writer if value is not None: writer.wri...

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def find_projects(self, file_identifier=".project"): """ Search all directory recursively for subdirs with `file_identifier' in it. :type file_identifier: str :param file_identifier: File identier, .project by default. :rtype: list :return: The list of subdirs with a `f...

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def private_config_content(self, private_config): """ Update the private config :param private_config: content of the private configuration file """ try: private_config_path = os.path.join(self.working_dir, "private-config.cfg") if private_config is Non...

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def run(self, grid=None, num_of_paths=2000, seed=0, num_of_workers=CPU_COUNT, profiling=False): """ implements simulation :param list(date) grid: list of Monte Carlo grid dates :param int num_of_paths: number of Monte Carlo paths :param hashable seed: seed used for rnds initiali...

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def static(self, uri, file_or_directory, *args, **kwargs): """Create a blueprint static route from a decorated function. :param uri: endpoint at which the route will be accessible. :param file_or_directory: Static asset. """ static = FutureStatic(uri, file_or_directory, args, kw...

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def build_parameters(self): """ Build the CLI command line from the parameter values. :return: list of CLI strings -- not escaped! :rtype: list[str] """ param_bits = [] for name in self.parameters: param_bits.extend(self.build_parameter_by_name(name) ...

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def copy(self): """ Return a new :class:`~pywbem.CIMParameter` object that is a copy of this CIM parameter. This is a middle-deep copy; any mutable types in attributes except the following are copied, so besides these exceptions, modifications of the original object will...

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def _Rforce(self,R,z,phi=0.,t=0.): """ NAME: _Rforce PURPOSE: evaluate the radial force for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT: ...

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def delete_key(self, key_name, headers=None, version_id=None, mfa_token=None, callback=None): """ Deletes a key from the bucket. If a version_id is provided, only that version of the key will be deleted. :type key_name: string :param key_name: The key...

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def get(self, key, func=None, args=(), kwargs=None, **opts): """Manually retrieve a value from the cache, calculating as needed. Params: key -> string to store/retrieve value from. func -> callable to generate value if it does not exist, or has expired. ...

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def cnst_AT(self, Y): r"""Compute :math:`A^T \mathbf{y}`. In this case :math:`A^T \mathbf{y} = (I \;\; \Gamma_0^T \;\; \Gamma_1^T \;\; \ldots) \mathbf{y}`. """ return self.cnst_A0T(self.block_sep0(Y)) + \ np.sum(self.cnst_A1T(self.block_sep1(Y)), axis=-1)

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def add_adjust(self, data, prehashed=False): """Add a new leaf, and adjust the tree, without rebuilding the whole thing. """ subtrees = self._get_whole_subtrees() new_node = Node(data, prehashed=prehashed) self.leaves.append(new_node) for node in reversed(subtrees): ...

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def roc_values(fg_vals, bg_vals): """ Return fpr (x) and tpr (y) of the ROC curve. Parameters ---------- fg_vals : array_like The list of values for the positive set. bg_vals : array_like The list of values for the negative set. Returns ------- fpr : array ...

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def load_from_file(swag_path, swag_type='yml', root_path=None): """ Load specs from YAML file """ if swag_type not in ('yaml', 'yml'): raise AttributeError("Currently only yaml or yml supported") # TODO: support JSON try: enc = detect_by_bom(swag_path) with codecs.op...

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def _from_dict(cls, _dict): """Initialize a UtteranceAnalyses object from a json dictionary.""" args = {} if 'utterances_tone' in _dict: args['utterances_tone'] = [ UtteranceAnalysis._from_dict(x) for x in (_dict.get('utterances_tone')) ] ...

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def get(key, default=-1): """Backport support for original codes.""" if isinstance(key, int): return Setting(key) if key not in Setting._member_map_: extend_enum(Setting, key, default) return Setting[key]

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def auto_load_app_modules(self, modules): """Auto load app modules""" for app in apps.get_app_configs(): for module in modules: try: import_module('{}.{}'.format(app.module.__package__, module)) except ImportError: pass

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def isheader(self, line): """Determine whether a given line is a legal header. This method should return the header name, suitably canonicalized. You may override this method in order to use Message parsing on tagged data in RFC 2822-like formats with special header formats. """...

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def check_class(obj, target_class, allow_none = False): """ Checks that the obj is a (sub)type of target_class. Raises a TypeError if this is not the case. :param obj: object whos type is to be checked :type obj: any type :param target_class: target type/class :type target_...

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def imagetransformerpp_base_14l_8h_big_uncond_dr03_dan_p(): """Gets to 2.92 in just under 4 days on 8 p100s.""" hparams = imagetransformerpp_base_12l_8h_big_uncond_dr03_dan_l() hparams.num_decoder_layers = 14 hparams.batch_size = 8 hparams.layer_prepostprocess_dropout = 0.2 return hparams

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def grow(self, amount): """Spawn new worker threads (not above self.max).""" if self.max > 0: budget = max(self.max - len(self._threads), 0) else: # self.max <= 0 indicates no maximum budget = float('inf') n_new = min(amount, budget) workers ...

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def get_sec_project_activity(self): """ Generate the "project activity" section of the report. """ logger.debug("Calculating Project Activity metrics.") data_path = os.path.join(self.data_dir, "activity") if not os.path.exists(data_path): os.makedirs(data_pa...

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def bind_expression_to_resources(expr, resources): """ Bind a Blaze expression to resources. Parameters ---------- expr : bz.Expr The expression to which we want to bind resources. resources : dict[bz.Symbol -> any] Mapping from the loadable terms of ``expr`` to actual data reso...

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def inflate_to_one_hot(tensor, classes): """ Converts a tensor with index form to a one hot tensor. :param tensor: A tensor of shape [batch, h, w, 1] :param classes: The number of classes that exist. (length of one hot encoding) :return: A tensor of shape [batch, h, w, classes]. """ one_hot ...

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def encode(self, word): """Return the MRA personal numeric identifier (PNI) for a word. Parameters ---------- word : str The word to transform Returns ------- str The MRA PNI Examples -------- >>> pe = MRA() ...

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def main(): """The main function of the script""" desc = 'Benchmark the files generated by generate.py' parser = argparse.ArgumentParser(description=desc) parser.add_argument( '--src', dest='src_dir', default='generated', help='The directory containing the sources to benc...

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def GetValueLength(rd, pos): """Get value length for a key in rd. For a key at position pos in the Report Descriptor rd, return the length of the associated value. This supports both short and long format values. Args: rd: Report Descriptor pos: The position of the key in rd. Returns: (key_s...

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def _run_systemdrun_decide(self): """ Internal method decide if it is possible to use --wait option to systemd for example RHEL7 does not support --wait option :return: bool """ if self.systemd_wait_support is None: self.systemd_wait_support = "--wait...

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def add_color_stop_rgba(self, offset, red, green, blue, alpha=1): """Adds a translucent color stop to a gradient pattern. The offset specifies the location along the gradient's control vector. For example, a linear gradient's control vector is from (x0,y0) to (x1,y1) while a rad...

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def _TempRootPath(): """Returns a default root path for storing temporary files.""" # `FLAGS.test_tmpdir` is defined only in test environment, so we can't expect # for it to be always defined. test_tmpdir = ( compatibility.Environ("TEST_TMPDIR", default=None) or FLAGS.get_flag_value("test_tmpdir", d...

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def create_swag_from_ctx(ctx): """Creates SWAG client from the current context.""" swag_opts = {} if ctx.type == 'file': swag_opts = { 'swag.type': 'file', 'swag.data_dir': ctx.data_dir, 'swag.data_file': ctx.data_file } elif ctx.type == 's3': ...

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def parse_bowtie_stats(self, stats_file): """ Parses Bowtie2 stats file, returns series with values. :param str stats_file: Bowtie2 output file with alignment statistics. """ import pandas as pd stats = pd.Series(index=["readCount", "unpaired", "unaligned", "unique", "mu...

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def has_dynamic_getattr(self, context=None): """Check if the class has a custom __getattr__ or __getattribute__. If any such method is found and it is not from builtins, nor from an extension module, then the function will return True. :returns: True if the class has a custom ...

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def download_pojo(self, path="", get_genmodel_jar=False, genmodel_name=""): """ Download the POJO for this model to the directory specified by path. If path is an empty string, then dump the output to screen. :param path: An absolute path to the directory where POJO should be saved. ...

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def get_dev_vlans(devid, auth, url): """Function takes input of devID to issue RESTUL call to HP IMC :param devid: requires devId as the only input parameter :return: dictionary of existing vlans on the devices. Device must be supported in HP IMC platform VLAN manager module """ # checks to see if ...

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async def _handle_metrics(self, request: Request) -> Response: """Handler for metrics.""" if self._update_handler: await self._update_handler(self.registry.get_metrics()) response = Response(body=self.registry.generate_metrics()) response.content_type = CONTENT_TYPE_LATEST ...

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def match_many(self, models, results, relation): """ Match the eargerly loaded resuls to their single parents. :param models: The parents :type models: list :param results: The results collection :type results: Collection :param relation: The relation :...

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def has_command(self, command): """Returns True if any of the plugins have the given command.""" for pbt in self._plugins.values(): if pbt.command == command: return True return False

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def get_tunnel_info_output_tunnel_has_conflicts(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_tunnel_info = ET.Element("get_tunnel_info") config = get_tunnel_info output = ET.SubElement(get_tunnel_info, "output") tunnel = ET.SubElem...

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def nextPlot(self): """Moves the displayed plot to the next one""" if self.stacker.currentIndex() < self.stacker.count(): self.stacker.setCurrentIndex(self.stacker.currentIndex()+1)

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def check_sas_base_dir(root=None): ''' Check for the SAS_BASE_DIR environment variable Will set the SAS_BASE_DIR in your local environment or prompt you to define one if is undefined Parameters: root (str): Optional override of the SAS_BASE_DIR envvar ''' sasbasedir = root...

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def _update_structure_lines(self): '''ATOM and HETATM lines may be altered by function calls. When this happens, this function should be called to keep self.structure_lines up to date.''' structure_lines = [] atom_chain_order = [] chain_atoms = {} for line in self.lines: ...

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def build(self, recursive=True): """ Building an assembly buffers the :meth:`components` and :meth:`constraints`. Running ``build()`` is optional, it's automatically run when requesting :meth:`components` or :meth:`constraints`. Mostly it's used to test that there aren't any c...

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def removeCodedValue(self, name): """removes a codedValue by name""" for i in self._codedValues: if i['name'] == name: self._codedValues.remove(i) return True return False

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def client_info(self, client): """ Get client info. Uses GET to /clients/<client> interface. :Args: * *client*: (str) Client's ID :Returns: (dict) Client dictionary """ client = self._client_id(client) response = self._get(url.clients_id.format(id=c...

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def get_sensor_data(**kwargs): ''' Get sensor readings Iterates sensor reading objects :param kwargs: - api_host=127.0.0.1 - api_user=admin - api_pass=example - api_port=623 - api_kg=None CLI Example: .. code-block:: bash salt-call ipmi.get_se...

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def get_patch_op(self, keypath, value, op='replace'): """ Return an object that describes a change of configuration on the given staging. Setting will be applied on all available HTTP methods. """ if isinstance(value, bool): value = str(value).lower() return {...

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def next(self): """Return the next match; raises Exception if no next match available""" # Check the state and find the next match as a side-effect if necessary. if not self.has_next(): raise StopIteration("No next match") # Don't retain that memory any longer than necessary....

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45.1

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async def profile(self, ctx, platform, name): '''Fetch a profile.''' player = await self.client.get_player(platform, name) solos = await player.get_solos() await ctx.send("# of kills in solos for {}: {}".format(name,solos.kills.value))

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def __obj2choices(self, values): """ - json list of key, value pairs: Example: [["A", "Option 1 Label"], ["B", "Option 2 Label"]] - space separated string with a list of options: Example: "Option1 Opt2 Opt3" will be converted to a key, value pair of the follow...

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def estimate_gaussian(X): """ Returns the mean and the variance of a data set of X points assuming that the points come from a gaussian distribution X. """ mean = np.mean(X,0) variance = np.var(X,0) return Gaussian(mean,variance)

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def filter(self, predicates): """Summary Args: grouping_column_name (TYPE): Description Returns: TYPE: Description """ tys = [] for col_name, raw_column in self.raw_columns.items(): dtype = str(raw_column.dtype) if dtype =...

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def add_fast(self, filepath, hashfn=None, force=False): """ Bespoke function to add filepaths but set shortcircuit to True, which means only the first calculable hash will be stored. In this way only one "fast" hashing function need be called for each filepath. """ if has...

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46.444444

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async def heater_control(self, device_id, fan_status=None, power_status=None): """Set heater temps.""" heater = self.heaters.get(device_id) if heater is None: _LOGGER.error("No such device") return if fan_status is None: fa...

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41

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def _get_metadata(network_id, user_id): """ Get all the metadata in a network, across all scenarios returns a dictionary of dict objects, keyed on dataset ID """ log.info("Getting Metadata") dataset_qry = db.DBSession.query( Dataset ).outerjoin(DatasetOwner, and_(Data...

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def user(session, uid, ladder_ids=None): """Get all possible user info by name.""" data = get_user(session, uid) resp = dict(data) if not ladder_ids: return resp resp['ladders'] = {} for ladder_id in ladder_ids: if isinstance(ladder_id, str): ladder_id = lookup_ladder...

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def execute(self, uri, namespace, action, timeout=2, **kwargs): """Executes a given action with optional arguments. The execution of an action of an UPnP/TR64 device needs more than just the name of an action. It needs the control URI which is called to place the action and also the namespace a...

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def likelihood3(args): """ %prog likelihood3 140_20.json 140_70.json Plot the likelihood surface and marginal distributions for two settings. """ from matplotlib import gridspec p = OptionParser(likelihood3.__doc__) opts, args, iopts = p.set_image_options(args, figsize="10x10", ...

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def GC_partial(portion): """Manually compute GC content percentage in a DNA string, taking ambiguous values into account (according to standard IUPAC notation). """ sequence_count = collections.Counter(portion) gc = ((sum([sequence_count[i] for i in 'gGcCsS']) + sum([sequence_count[i] for...

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45.454545

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