kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def read_text_from_conll_file( file_name, layer_name=LAYER_CONLL, **kwargs ): ''' Reads the CONLL format syntactic analysis from given file, and returns as a Text object. The Text object has been tokenized for paragraphs, sentences, words, and it contains syntactic analyses aligne...	[ "def", "read_text_from_conll_file", "(", "file_name", ",", "layer_name", "=", "LAYER_CONLL", ",", "", "", "kwargs", ")", ":", "# 1) Load conll analysed text from file", "conll_lines", "=", "[", "]", "in_f", "=", "codecs", ".", "open", "(", "file_name", ",", "m...	40.012658	20.924051
def create_groups(orientations, groups, *kwargs): """ Create groups of an orientation measurement dataset """ grouped = [] # Copy all datasets to be safe (this could be bad for # memory usage, so can be disabled). if kwargs.pop('copy', True): orientations = [copy(o) for o in orient...	[ "def", "create_groups", "(", "orientations", ",", "", "groups", ",", "", "*", "kwargs", ")", ":", "grouped", "=", "[", "]", "# Copy all datasets to be safe (this could be bad for", "# memory usage, so can be disabled).", "if", "kwargs", ".", "pop", "(", "'copy'", ...	31.189189	16.594595
def _SkipFieldContents(tokenizer): """Skips over contents (value or message) of a field. Args: tokenizer: A tokenizer to parse the field name and values. """ # Try to guess the type of this field. # If this field is not a message, there should be a ":" between the # field name and the field value and a...	[ "def", "_SkipFieldContents", "(", "tokenizer", ")", ":", "# Try to guess the type of this field.", "# If this field is not a message, there should be a \":\" between the", "# field name and the field value and also the field value should not", "# start with \"{\" or \"<\" which indicates the begin...	41.647059	18.117647
def bulk_modify(self, filters_or_records, kwargs): """Shortcut to bulk modify records .. versionadded:: 2.17.0 Args: filters_or_records (tuple) or (Record): Either a list of Records, or a list of filters. Keyword Args: values (dict): Diction...	[ "def", "bulk_modify", "(", "self", ",", "", "filters_or_records", ",", "", "*", "kwargs", ")", ":", "values", "=", "kwargs", ".", "pop", "(", "'values'", ",", "None", ")", "if", "kwargs", ":", "raise", "ValueError", "(", "'Unexpected arguments: {}'", "."...	36.910714	24.4375
def create_parser(self): """Create the CLI parser.""" parser = argparse.ArgumentParser( description=PROGRAM_DESCRIPTION, formatter_class=argparse.RawDescriptionHelpFormatter, epilog=textwrap.dedent(PROGRAM_EPILOG)) parser.add_argument( 'filename',...	[ "def", "create_parser", "(", "self", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "PROGRAM_DESCRIPTION", ",", "formatter_class", "=", "argparse", ".", "RawDescriptionHelpFormatter", ",", "epilog", "=", "textwrap", ".", "dede...	40.606897	19.668966
def get_pseudo_salt(length, *args): """ generate a pseudo salt (used, if user is wrong) """ temp = "".join([arg for arg in args]) return hash_hexdigest(temp)[:length]	[ "def", "get_pseudo_salt", "(", "length", ",", "*", "args", ")", ":", "temp", "=", "\"\"", ".", "join", "(", "[", "arg", "for", "arg", "in", "args", "]", ")", "return", "hash_hexdigest", "(", "temp", ")", "[", ":", "length", "]" ]	30.166667	2.833333
def _peer_bfd_tx(self, **kwargs): """Return the BFD minimum transmit interval XML. You should not use this method. You probably want `BGP.bfd`. Args: peer_ip (str): Peer IPv4 address for BFD setting. min_tx (str): BFD transmit interval in milliseconds (300, 500,...	[ "def", "_peer_bfd_tx", "(", "self", ",", "", "", "kwargs", ")", ":", "method_name", "=", "'rbridge_id_router_router_bgp_router_bgp_attributes_'", "'neighbor_neighbor_ips_neighbor_addr_bfd_interval_min_tx'", "bfd_tx", "=", "getattr", "(", "self", ".", "_rbridge", ",", "m...	34.56	21
def put(self, source, rel_path, metadata=None): '''Copy a file to the repository Args: source: Absolute path to the source file, or a file-like object rel_path: path relative to the root of the repository ''' # This case should probably be deprecated. i...	[ "def", "put", "(", "self", ",", "source", ",", "rel_path", ",", "metadata", "=", "None", ")", ":", "# This case should probably be deprecated.", "if", "not", "isinstance", "(", "rel_path", ",", "basestring", ")", ":", "rel_path", "=", "rel_path", ".", "cache_k...	28.769231	21
def reorder_image(dst_order, src_arr, src_order): """Reorder src_arr, with order of color planes in src_order, as dst_order. """ depth = src_arr.shape[2] if depth != len(src_order): raise ValueError("src_order (%s) does not match array depth (%d)" % ( src_order, depth)) band...	[ "def", "reorder_image", "(", "dst_order", ",", "src_arr", ",", "src_order", ")", ":", "depth", "=", "src_arr", ".", "shape", "[", "2", "]", "if", "depth", "!=", "len", "(", "src_order", ")", ":", "raise", "ValueError", "(", "\"src_order (%s) does not match a...	37.896552	18.655172
def draw_lines(): """ Draws a line between a set of random values """ r = numpy.random.randn(200) fig = pyplot.figure() ax = fig.add_subplot(111) ax.plot(r) ax.grid(True) pyplot.savefig(lines_filename)	[ "def", "draw_lines", "(", ")", ":", "r", "=", "numpy", ".", "random", ".", "randn", "(", "200", ")", "fig", "=", "pyplot", ".", "figure", "(", ")", "ax", "=", "fig", ".", "add_subplot", "(", "111", ")", "ax", ".", "plot", "(", "r", ")", "ax", ...	19	16.666667
def decrypt_filedata(data, keys): '''Decrypts a file from Send''' # The last 16 bytes / 128 bits of data is the GCM tag # https://www.w3.org/TR/WebCryptoAPI/#aes-gcm-operations :- # 7. Let ciphertext be equal to C \| T, where '\|' denotes concatenation. data.seek(-16, 2) tag = data.read() # n...	[ "def", "decrypt_filedata", "(", "data", ",", "keys", ")", ":", "# The last 16 bytes / 128 bits of data is the GCM tag", "# https://www.w3.org/TR/WebCryptoAPI/#aes-gcm-operations :-", "# 7. Let ciphertext be equal to C \| T, where '\|' denotes concatenation.", "data", ".", "seek", "(", "-...	30.6	23.8
def decode(cls, phrase): """Calculate hexadecimal representation of the phrase. """ phrase = phrase.split(" ") out = "" for i in range(len(phrase) // 3): word1, word2, word3 = phrase[3i:3i+3] w1 = cls.word_list.index(word1) w2 = cls.word_list...	[ "def", "decode", "(", "cls", ",", "phrase", ")", ":", "phrase", "=", "phrase", ".", "split", "(", "\" \"", ")", "out", "=", "\"\"", "for", "i", "in", "range", "(", "len", "(", "phrase", ")", "//", "3", ")", ":", "word1", ",", "word2", ",", "wor...	40.692308	11.692308
def _setup_user_dir(self): """Returns user config dir, create it when it doesn't exist.""" user_dir = self._get_user_dir_path() rules_dir = user_dir.joinpath('rules') if not rules_dir.is_dir(): rules_dir.mkdir(parents=True) self.user_dir = user_dir	[ "def", "_setup_user_dir", "(", "self", ")", ":", "user_dir", "=", "self", ".", "_get_user_dir_path", "(", ")", "rules_dir", "=", "user_dir", ".", "joinpath", "(", "'rules'", ")", "if", "not", "rules_dir", ".", "is_dir", "(", ")", ":", "rules_dir", ".", "...	36.75	9.875
def write(self, data): ''' Write some bytes to the transport. ''' # MUST use a lock here else gevent could raise an exception if 2 # greenlets try to write at the same time. I was hoping that # sendall() would do that blocking for me, but I guess not. May # requir...	[ "def", "write", "(", "self", ",", "data", ")", ":", "# MUST use a lock here else gevent could raise an exception if 2", "# greenlets try to write at the same time. I was hoping that", "# sendall() would do that blocking for me, but I guess not. May", "# require an eventsocket-like buffer to sp...	40.692308	21.615385
def _parse_packet(rawdata): """ Returns a tupel (opcode, minusconf-data). opcode is None if this isn't a -conf packet.""" if (len(rawdata) < len(_MAGIC) + 1) or (_MAGIC != rawdata[:len(_MAGIC)]): # Wrong protocol return (None, None) opcode = rawdata[len(_MAGIC):len(_MAGIC)+1] payload =...	[ "def", "_parse_packet", "(", "rawdata", ")", ":", "if", "(", "len", "(", "rawdata", ")", "<", "len", "(", "_MAGIC", ")", "+", "1", ")", "or", "(", "_MAGIC", "!=", "rawdata", "[", ":", "len", "(", "_MAGIC", ")", "]", ")", ":", "# Wrong protocol", ...	33.090909	20.090909
def comment (self, s, args): """Write CSV comment.""" self.writeln(s=u"# %s" % s, args)	[ "def", "comment", "(", "self", ",", "s", ",", "", "", "args", ")", ":", "self", ".", "writeln", "(", "s", "=", "u\"# %s\"", "%", "s", ",", "", "", "args", ")" ]	35	4.333333
def alignment_to_partials(alignment, missing_data=None): """ Generate a partials dictionary from a treeCl.Alignment """ partials_dict = {} for (name, sequence) in alignment.get_sequences(): datatype = 'dna' if alignment.is_dna() else 'protein' partials_dict[name] = seq_to_partials(sequence, ...	[ "def", "alignment_to_partials", "(", "alignment", ",", "missing_data", "=", "None", ")", ":", "partials_dict", "=", "{", "}", "for", "(", "name", ",", "sequence", ")", "in", "alignment", ".", "get_sequences", "(", ")", ":", "datatype", "=", "'dna'", "if", ...	42.307692	16.153846
def __substitute_replace_pairs(self): """ Substitutes all replace pairs in the source of the stored routine. """ self._set_magic_constants() routine_source = [] i = 0 for line in self._routine_source_code_lines: self._replace['__LINE__'] = "'%d'" % (i...	[ "def", "__substitute_replace_pairs", "(", "self", ")", ":", "self", ".", "_set_magic_constants", "(", ")", "routine_source", "=", "[", "]", "i", "=", "0", "for", "line", "in", "self", ".", "_routine_source_code_lines", ":", "self", ".", "_replace", "[", "'__...	35.055556	16.944444
def _name_with_flags(self, include_restricted, title=None): """Generate the name with flags.""" name = "Special: " if self.special else "" name += self.name if title: name += " - {}".format(title) if include_restricted and self.restricted: name += " (R)" ...	[ "def", "_name_with_flags", "(", "self", ",", "include_restricted", ",", "title", "=", "None", ")", ":", "name", "=", "\"Special: \"", "if", "self", ".", "special", "else", "\"\"", "name", "+=", "self", ".", "name", "if", "title", ":", "name", "+=", "\" -...	40.846154	11.846154
def classify_intersection(intersection, edge_nodes1, edge_nodes2): r"""Determine which curve is on the "inside of the intersection". .. note:: This is a helper used only by :meth:`.Surface.intersect`. This is intended to be a helper for forming a :class:`.CurvedPolygon` from the edge intersect...	[ "def", "classify_intersection", "(", "intersection", ",", "edge_nodes1", ",", "edge_nodes2", ")", ":", "if", "intersection", ".", "s", "==", "1.0", "or", "intersection", ".", "t", "==", "1.0", ":", "raise", "ValueError", "(", "\"Intersection occurs at the end of a...	34.821803	19.098532
def _create_clause_based_dep_links( orig_text, layer=LAYER_CONLL ): ''' Rewrites dependency links in the text from sentence-based linking to clause- based linking: *) words which have their parent outside-the-clause will become root nodes (will obtain link value -1), and ...	[ "def", "_create_clause_based_dep_links", "(", "orig_text", ",", "layer", "=", "LAYER_CONLL", ")", ":", "sent_start_index", "=", "0", "for", "sent_text", "in", "orig_text", ".", "split_by", "(", "SENTENCES", ")", ":", "# 1) Create a mapping: from sentence-based dependenc...	48.608696	19.478261
def element(self): """ :return: the :class:`Element` that contains these attributes. """ return self.adapter.wrap_node( self.impl_element, self.adapter.impl_document, self.adapter)	[ "def", "element", "(", "self", ")", ":", "return", "self", ".", "adapter", ".", "wrap_node", "(", "self", ".", "impl_element", ",", "self", ".", "adapter", ".", "impl_document", ",", "self", ".", "adapter", ")" ]	36.5	14.166667
def list_data_type(type_list): """This function takes a list of format specifiers and returns a list of data types represented by the format specifiers.""" data_type = [] for item in type_list: match = re.match(r"(\d+)(.+)", item) if not match: reps = 1 if item[0]...	[ "def", "list_data_type", "(", "type_list", ")", ":", "data_type", "=", "[", "]", "for", "item", "in", "type_list", ":", "match", "=", "re", ".", "match", "(", "r\"(\\d+)(.+)\"", ",", "item", ")", "if", "not", "match", ":", "reps", "=", "1", "if", "it...	34.785714	9.178571
def build_result(data): """Create a dictionary with the contents of result.json""" more = {} for key, value in data.items(): if key != 'elements': newnode = value else: newnode = {} for el in value: nkey, nvalue = process_node(el) ...	[ "def", "build_result", "(", "data", ")", ":", "more", "=", "{", "}", "for", "key", ",", "value", "in", "data", ".", "items", "(", ")", ":", "if", "key", "!=", "'elements'", ":", "newnode", "=", "value", "else", ":", "newnode", "=", "{", "}", "for...	25.466667	16.933333
def minion_mods( opts, context=None, utils=None, whitelist=None, initial_load=False, loaded_base_name=None, notify=False, static_modules=None, proxy=None): ''' Load execution modules Returns a dictionary of execution modules appropriat...	[ "def", "minion_mods", "(", "opts", ",", "context", "=", "None", ",", "utils", "=", "None", ",", "whitelist", "=", "None", ",", "initial_load", "=", "False", ",", "loaded_base_name", "=", "None", ",", "notify", "=", "False", ",", "static_modules", "=", "N...	35.698795	22.277108
def start(self): ''' Start the actual master. If sub-classed, don't ever forget to run: super(YourSubClass, self).start() NOTE: Run any required code before calling `super()`. ''' super(SaltAPI, self).start() if check_user(self.config['user']): ...	[ "def", "start", "(", "self", ")", ":", "super", "(", "SaltAPI", ",", "self", ")", ".", "start", "(", ")", "if", "check_user", "(", "self", ".", "config", "[", "'user'", "]", ")", ":", "log", ".", "info", "(", "'The salt-api is starting up'", ")", "se...	27.5	20.071429
def sign(self, cert, pkey, digest_type=None, data=None, flags=Flags.BINARY): """ Adds another signer to already signed message @param cert - signer's certificate @param pkey - signer's private key @param digest_type - message digest to use as DigestType object ...	[ "def", "sign", "(", "self", ",", "cert", ",", "pkey", ",", "digest_type", "=", "None", ",", "data", "=", "None", ",", "flags", "=", "Flags", ".", "BINARY", ")", ":", "if", "not", "pkey", ".", "cansign", ":", "raise", "ValueError", "(", "\"Specified k...	47	15.888889
def deprecated_for(replace_message): """ Decorate a deprecated function, with info about what to use instead, like: @deprecated_for("toBytes()") def toAscii(arg): ... """ def decorator(to_wrap): @functools.wraps(to_wrap) def wrapper(args, *kwargs): warnings...	[ "def", "deprecated_for", "(", "replace_message", ")", ":", "def", "decorator", "(", "to_wrap", ")", ":", "@", "functools", ".", "wraps", "(", "to_wrap", ")", "def", "wrapper", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "warnings", ".", "warn"...	31.166667	15.5
def setup(self, app): ''' Setup properties from parent app on the command ''' self.logger = app.logger self.shell.logger = self.logger if not self.command_name: raise EmptyCommandNameException() self.app = app self.arguments_declaration = sel...	[ "def", "setup", "(", "self", ",", "app", ")", ":", "self", ".", "logger", "=", "app", ".", "logger", "self", ".", "shell", ".", "logger", "=", "self", ".", "logger", "if", "not", "self", ".", "command_name", ":", "raise", "EmptyCommandNameException", "...	26.222222	17.333333
def solution(events, slots, objective_function=None, solver=None, **kwargs): """Compute a schedule in solution form Parameters ---------- events : list or tuple of :py:class:`resources.Event` instances slots : list or tuple of :py:class:`resources.Slot` instances solver : pulp.s...	[ "def", "solution", "(", "events", ",", "slots", ",", "objective_function", "=", "None", ",", "solver", "=", "None", ",", "", "", "kwargs", ")", ":", "shape", "=", "Shape", "(", "len", "(", "events", ")", ",", "len", "(", "slots", ")", ")", "probl...	28.962963	18.425926
def strong(node): """ A bolded section """ o = nodes.strong() for n in MarkDown(node): o += n return o	[ "def", "strong", "(", "node", ")", ":", "o", "=", "nodes", ".", "strong", "(", ")", "for", "n", "in", "MarkDown", "(", "node", ")", ":", "o", "+=", "n", "return", "o" ]	15.875	15.875
def explore(args): """Create mapping of sequences of two clusters """ logger.info("reading sequeces") data = load_data(args.json) logger.info("get sequences from json") #get_sequences_from_cluster() c1, c2 = args.names.split(",") seqs, names = get_sequences_from_cluster(c1, c2, data[0]) ...	[ "def", "explore", "(", "args", ")", ":", "logger", ".", "info", "(", "\"reading sequeces\"", ")", "data", "=", "load_data", "(", "args", ".", "json", ")", "logger", ".", "info", "(", "\"get sequences from json\"", ")", "#get_sequences_from_cluster()", "c1", ",...	37.777778	11.833333
def get_rng(obj=None): """ Get a good RNG seeded with time, pid and the object. Args: obj: some object to use to generate random seed. Returns: np.random.RandomState: the RNG. """ seed = (id(obj) + os.getpid() + int(datetime.now().strftime("%Y%m%d%H%M%S%f"))) % 42949...	[ "def", "get_rng", "(", "obj", "=", "None", ")", ":", "seed", "=", "(", "id", "(", "obj", ")", "+", "os", ".", "getpid", "(", ")", "+", "int", "(", "datetime", ".", "now", "(", ")", ".", "strftime", "(", "\"%Y%m%d%H%M%S%f\"", ")", ")", ")", "%",...	29	15.428571
def chunked_join(iterable, int1, int2, str1, str2, func): """Chunk and join.""" chunks = list(chunked(iterable, int1)) logging.debug(chunks) groups = [list(chunked(chunk, int2)) for chunk in chunks] logging.debug(groups) return str1.join([ str2.join([func(''.join(chunk)) for chunk in chu...	[ "def", "chunked_join", "(", "iterable", ",", "int1", ",", "int2", ",", "str1", ",", "str2", ",", "func", ")", ":", "chunks", "=", "list", "(", "chunked", "(", "iterable", ",", "int1", ")", ")", "logging", ".", "debug", "(", "chunks", ")", "groups", ...	35.2	15.5
def get_files(path, ext=[], include=True): """遍历提供的文件夹的所有子文件夹，饭后生成器对象。 :param str path: 待处理的文件夹。 :param list ext: 扩展名列表。 :param bool include: 若值为 True，代表 ext 提供的是包含列表；否则是排除列表。 :returns: 一个生成器对象。 """ has_ext = len(ext)>0 for p, d, fs in os.walk(path): ...	[ "def", "get_files", "(", "path", ",", "ext", "=", "[", "]", ",", "include", "=", "True", ")", ":", "has_ext", "=", "len", "(", "ext", ")", ">", "0", "for", "p", ",", "d", ",", "fs", "in", "os", ".", "walk", "(", "path", ")", ":", "for", "f"...	29.416667	11.083333
def iter_logical_lines(self, blob): """Returns an iterator of (start_line, stop_line, indent) for logical lines """ indent_stack = [] contents = [] line_number_start = None for token in self.iter_tokens(blob): token_type, token_text, token_start = token[0:3] if token_type == tokenize.IND...	[ "def", "iter_logical_lines", "(", "self", ",", "blob", ")", ":", "indent_stack", "=", "[", "]", "contents", "=", "[", "]", "line_number_start", "=", "None", "for", "token", "in", "self", ".", "iter_tokens", "(", "blob", ")", ":", "token_type", ",", "toke...	38.92	10.32
def payload_body(req): """ A generator that will include the sha256 signature of the request's body in the JWT payload. This is only done if the request could have a body: if the method is POST or PUT. >>> auth = JWTAuth('secret') >>> auth.add_field('body', payload_body) """ to_hash = ...	[ "def", "payload_body", "(", "req", ")", ":", "to_hash", "=", "req", ".", "body", "if", "type", "(", "req", ".", "body", ")", "is", "bytes", "else", "req", ".", "body", ".", "encode", "(", "'utf-8'", ")", "if", "req", ".", "method", "in", "(", "'P...	33.625	19.125
def unparse(self, indent_step = 4, max_linelen = 72) : "returns an XML string description of this Introspection tree." out = io.StringIO() def to_string(obj, indent) : tag_name = obj.tag_name attrs = [] for attrname in obj.tag_attrs : attr = ...	[ "def", "unparse", "(", "self", ",", "indent_step", "=", "4", ",", "max_linelen", "=", "72", ")", ":", "out", "=", "io", ".", "StringIO", "(", ")", "def", "to_string", "(", "obj", ",", "indent", ")", ":", "tag_name", "=", "obj", ".", "tag_name", "at...	34.478723	15.946809
def collapse_all(self): """collapse all messages in thread""" for MT in self.messagetrees(): MT.collapse(MT.root) self.focus_selected_message()	[ "def", "collapse_all", "(", "self", ")", ":", "for", "MT", "in", "self", ".", "messagetrees", "(", ")", ":", "MT", ".", "collapse", "(", "MT", ".", "root", ")", "self", ".", "focus_selected_message", "(", ")" ]	35	6
def from_ini(cls, folder, ini_file='fpp.ini', ichrone='mist', recalc=False, refit_trap=False, **kwargs): """ To enable simple usage, initializes a FPPCalculation from a .ini file By default, a file called ``fpp.ini`` will be looked for in the current folder. Also presen...	[ "def", "from_ini", "(", "cls", ",", "folder", ",", "ini_file", "=", "'fpp.ini'", ",", "ichrone", "=", "'mist'", ",", "recalc", "=", "False", ",", "refit_trap", "=", "False", ",", "", "", "kwargs", ")", ":", "# Check if all starmodel fits are done.", "# If ...	38.691057	22.186992
def parse(self, uri, defaults=None): """Parse the URI. uri is the uri to parse. defaults is a scheme-dependent list of values to use if there is no value for that part in the supplied URI. The return value is a tuple of scheme-dependent length. """ return tuple(...	[ "def", "parse", "(", "self", ",", "uri", ",", "defaults", "=", "None", ")", ":", "return", "tuple", "(", "[", "self", ".", "scheme_of", "(", "uri", ")", "]", "+", "list", "(", "self", ".", "parser_for", "(", "uri", ")", "(", "defaults", ")", ".",...	38.3	21.1
def get_stacked_rnn(config: RNNConfig, prefix: str, parallel_inputs: bool = False, layers: Optional[Iterable[int]] = None) -> mx.rnn.SequentialRNNCell: """ Returns (stacked) RNN cell given parameters. :param config: rnn configuration. :param prefix: Symbol prefix...	[ "def", "get_stacked_rnn", "(", "config", ":", "RNNConfig", ",", "prefix", ":", "str", ",", "parallel_inputs", ":", "bool", "=", "False", ",", "layers", ":", "Optional", "[", "Iterable", "[", "int", "]", "]", "=", "None", ")", "->", "mx", ".", "rnn", ...	50.913793	29.258621
def _derX(self,x,y): ''' Returns the first derivative of the function with respect to X at each value in (x,y). Only called internally by HARKinterpolator2D._derX. ''' m = len(x) temp = np.zeros((m,self.funcCount)) for j in range(self.funcCount): temp...	[ "def", "_derX", "(", "self", ",", "x", ",", "y", ")", ":", "m", "=", "len", "(", "x", ")", "temp", "=", "np", ".", "zeros", "(", "(", "m", ",", "self", ".", "funcCount", ")", ")", "for", "j", "in", "range", "(", "self", ".", "funcCount", ")...	36.625	16.5
def run(self, args): """Flashes the device connected to the J-Link. Args: self (FlashCommand): the ``FlashCommand`` instance args (Namespace): the arguments passed on the command-line Returns: ``None`` """ kwargs = {} kwargs['path'] = args....	[ "def", "run", "(", "self", ",", "args", ")", ":", "kwargs", "=", "{", "}", "kwargs", "[", "'path'", "]", "=", "args", ".", "file", "[", "0", "]", "kwargs", "[", "'addr'", "]", "=", "args", ".", "addr", "kwargs", "[", "'on_progress'", "]", "=", ...	29.944444	18.111111
def create_app(settings): """Create a new Flask application""" app = Flask(__name__) # Import settings from file for name in dir(settings): value = getattr(settings, name) if not (name.startswith('_') or isinstance(value, ModuleType) or isinstance(value, FunctionType)): ...	[ "def", "create_app", "(", "settings", ")", ":", "app", "=", "Flask", "(", "__name__", ")", "# Import settings from file", "for", "name", "in", "dir", "(", "settings", ")", ":", "value", "=", "getattr", "(", "settings", ",", "name", ")", "if", "not", "(",...	27.875	17.725
def start(self, threaded=True): """Start the data feed. :param threaded: If True, run in a separate thread. """ self.running = True if threaded: self._thread = Thread(target=self._run) self._thread.start() else: self._run()	[ "def", "start", "(", "self", ",", "threaded", "=", "True", ")", ":", "self", ".", "running", "=", "True", "if", "threaded", ":", "self", ".", "_thread", "=", "Thread", "(", "target", "=", "self", ".", "_run", ")", "self", ".", "_thread", ".", "star...	27.090909	14.909091
def with_color_stripped(f): """ A function decorator for applying to `len` or imitators thereof that strips ANSI color sequences from a string before passing it on. If any color sequences are not followed by a reset sequence, an `UnterminatedColorError` is raised. """ @wraps(f) def colo...	[ "def", "with_color_stripped", "(", "f", ")", ":", "@", "wraps", "(", "f", ")", "def", "colored_len", "(", "s", ")", ":", "s2", "=", "re", ".", "sub", "(", "COLOR_BEGIN_RGX", "+", "'(.*?)'", "+", "COLOR_END_RGX", ",", "lambda", "m", ":", "re", ".", ...	35.333333	18.777778
def check_longitude(self, ds): ''' Check variable(s) that define longitude and are defined correctly according to CF. CF §4.2 Variables representing longitude must always explicitly include the units attribute; there is no default value. The recommended unit of longitude is deg...	[ "def", "check_longitude", "(", "self", ",", "ds", ")", ":", "# TODO we already have a check_latitude... I'm sure we can make DRYer", "ret_val", "=", "[", "]", "allowed_lon_units", "=", "[", "'degrees_east'", ",", "'degree_east'", ",", "'degree_e'", ",", "'degrees_e'", "...	49.1875	26.625
def get_mac_address_table_output_has_more(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_mac_address_table = ET.Element("get_mac_address_table") config = get_mac_address_table output = ET.SubElement(get_mac_address_table, "output") h...	[ "def", "get_mac_address_table_output_has_more", "(", "self", ",", "", "", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "get_mac_address_table", "=", "ET", ".", "Element", "(", "\"get_mac_address_table\"", ")", "config", "=",...	40.833333	13.083333
def search_extension(self, limit=100, offset=0, **kw): """Search the list of available extensions.""" response = self.request(E.searchExtensionRequest( E.limit(limit), E.offset(offset), E.withDescription(int(kw.get('with_description', 0))), E.withPrice(in...	[ "def", "search_extension", "(", "self", ",", "limit", "=", "100", ",", "offset", "=", "0", ",", "", "", "kw", ")", ":", "response", "=", "self", ".", "request", "(", "E", ".", "searchExtensionRequest", "(", "E", ".", "limit", "(", "limit", ")", "...	41.818182	17.636364
def message_to_dict(msg): """Convert an email message into a dictionary. This function transforms an `email.message.Message` object into a dictionary. Headers are stored as key:value pairs while the body of the message is stored inside `body` key. Body may have two other keys inside, 'plain', for p...	[ "def", "message_to_dict", "(", "msg", ")", ":", "def", "parse_headers", "(", "msg", ")", ":", "headers", "=", "{", "}", "for", "header", ",", "value", "in", "msg", ".", "items", "(", ")", ":", "hv", "=", "[", "]", "for", "text", ",", "charset", "...	34.247059	21.129412
def Start(self): """Issue a request to list the directory.""" self.CallClient( server_stubs.PlistQuery, request=self.args.request, next_state="Receive")	[ "def", "Start", "(", "self", ")", ":", "self", ".", "CallClient", "(", "server_stubs", ".", "PlistQuery", ",", "request", "=", "self", ".", "args", ".", "request", ",", "next_state", "=", "\"Receive\"", ")" ]	29.833333	11.5
def on_key_press(self, symbol, modifiers): """ Pyglet specific key press callback. Forwards and translates the events to the example """ self.example.key_event(symbol, self.keys.ACTION_PRESS)	[ "def", "on_key_press", "(", "self", ",", "symbol", ",", "modifiers", ")", ":", "self", ".", "example", ".", "key_event", "(", "symbol", ",", "self", ".", "keys", ".", "ACTION_PRESS", ")" ]	38.5	7.833333
def are_diphtong(tokenA, tokenB): """ Check (naively) whether the two tokens can form a diphtong. This would be a sequence of vowels of which no more than one is syllabic. Vowel sequences connected with a tie bar would already be handled in tokenise_word, so are not checked for here. Users who want more sophisti...	[ "def", "are_diphtong", "(", "tokenA", ",", "tokenB", ")", ":", "is_short", "=", "lambda", "token", ":", "'◌̯'[1]", " ", "i", "n", "to", "en", "subtokens", "=", "[", "]", "for", "char", "in", "tokenA", "+", "tokenB", ":", "if", "ipa", ".", "is_vowel",...	26.15625	23.09375
def find_modules(import_path, include_packages=False, recursive=False): """Finds all the modules below a package. This can be useful to automatically import all views / controllers so that their metaclasses / function decorators have a chance to register themselves on the application. Packages are...	[ "def", "find_modules", "(", "import_path", ",", "include_packages", "=", "False", ",", "recursive", "=", "False", ")", ":", "module", "=", "import_string", "(", "import_path", ")", "path", "=", "getattr", "(", "module", ",", "\"__path__\"", ",", "None", ")",...	43.266667	20.766667
def f_preset_parameter(self, param_name, args, *kwargs): """Presets parameter value before a parameter is added. Can be called before parameters are added to the Trajectory in order to change the values that are stored into the parameter on creation. After creation of a parameter, th...	[ "def", "f_preset_parameter", "(", "self", ",", "param_name", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "if", "not", "param_name", ".", "startswith", "(", "'parameters.'", ")", ":", "param_name", "=", "'parameters.'", "+", "param_name", "self", "...	32.894737	28.842105
def clone(self, **kwargs): ''' Clone this context, and return the ChildContextDict ''' child = ChildContextDict(parent=self, threadsafe=self._threadsafe, overrides=kwargs) return child	[ "def", "clone", "(", "self", ",", "", "", "kwargs", ")", ":", "child", "=", "ChildContextDict", "(", "parent", "=", "self", ",", "threadsafe", "=", "self", ".", "_threadsafe", ",", "overrides", "=", "kwargs", ")", "return", "child" ]	36.5	27.166667
def add_docs(self, docs): """docs is a list of fields that are a dictionary of name:value for a record.""" return self.query( 'solr', '<add>{}</add>'.format( ''.join([self._format_add(fields) for fields in docs]) ), do_post=True, )	[ "def", "add_docs", "(", "self", ",", "docs", ")", ":", "return", "self", ".", "query", "(", "'solr'", ",", "'<add>{}</add>'", ".", "format", "(", "''", ".", "join", "(", "[", "self", ".", "_format_add", "(", "fields", ")", "for", "fields", "in", "doc...	34.555556	17.444444
def create_auto_scaling_group(AutoScalingGroupName=None, LaunchConfigurationName=None, InstanceId=None, MinSize=None, MaxSize=None, DesiredCapacity=None, DefaultCooldown=None, AvailabilityZones=None, LoadBalancerNames=None, TargetGroupARNs=None, HealthCheckType=None, HealthCheckGracePeriod=None, PlacementGroup=None, VP...	[ "def", "create_auto_scaling_group", "(", "AutoScalingGroupName", "=", "None", ",", "LaunchConfigurationName", "=", "None", ",", "InstanceId", "=", "None", ",", "MinSize", "=", "None", ",", "MaxSize", "=", "None", ",", "DesiredCapacity", "=", "None", ",", "Defaul...	48.980519	38.967532
def _mask_feature_data(feature_data, mask, mask_type): """ Masks values of data feature with a given mask of given mask type. The masking is done by assigning `numpy.nan` value. :param feature_data: Data array which will be masked :type feature_data: numpy.ndarray :param mask: M...	[ "def", "_mask_feature_data", "(", "feature_data", ",", "mask", ",", "mask_type", ")", ":", "if", "mask_type", ".", "is_spatial", "(", ")", "and", "feature_data", ".", "shape", "[", "1", ":", "3", "]", "!=", "mask", ".", "shape", "[", "-", "3", ":", "...	42.315789	21.894737
def set_cognitive_process(self, grade_id): """Sets the cognitive process. arg: grade_id (osid.id.Id): the new cognitive process raise: InvalidArgument - ``grade_id`` is invalid raise: NoAccess - ``grade_id`` cannot be modified raise: NullArgument - ``grade_id`` is ``null``...	[ "def", "set_cognitive_process", "(", "self", ",", "grade_id", ")", ":", "# Implemented from template for osid.resource.ResourceForm.set_avatar_template", "if", "self", ".", "get_cognitive_process_metadata", "(", ")", ".", "is_read_only", "(", ")", ":", "raise", "errors", ...	45	17.5625
def _no_auto_update_getter(self): """:class:`bool`. Boolean controlling whether the :meth:`start_update` method is automatically called by the :meth:`update` method Examples -------- You can disable the automatic update via >>> with data.no_auto_update: ... data.update(time=1)...	[ "def", "_no_auto_update_getter", "(", "self", ")", ":", "if", "getattr", "(", "self", ",", "'_no_auto_update'", ",", "None", ")", "is", "not", "None", ":", "return", "self", ".", "_no_auto_update", "else", ":", "self", ".", "_no_auto_update", "=", "utils", ...	31.608696	17.565217
def _get_all_volumes_paths(conn): ''' Extract the path and backing stores path of all volumes. :param conn: libvirt connection to use ''' volumes = [vol for l in [obj.listAllVolumes() for obj in conn.listAllStoragePools()] for vol in l] return {vol.path(): [path.text for path in ElementTree.fro...	[ "def", "_get_all_volumes_paths", "(", "conn", ")", ":", "volumes", "=", "[", "vol", "for", "l", "in", "[", "obj", ".", "listAllVolumes", "(", ")", "for", "obj", "in", "conn", ".", "listAllStoragePools", "(", ")", "]", "for", "vol", "in", "l", "]", "r...	47.111111	32.222222
def command(self, func): """ Decorator to add a command function to the registry. :param func: command function. """ command = Command(func) self._commands[func.__name__] = command return func	[ "def", "command", "(", "self", ",", "func", ")", ":", "command", "=", "Command", "(", "func", ")", "self", ".", "_commands", "[", "func", ".", "__name__", "]", "=", "command", "return", "func" ]	24.1	15.5
def recompute(self, quiet=False, **kwargs): """ Re-compute a previously computed model. You might want to do this if the kernel parameters change and the kernel is labeled as ``dirty``. :param quiet: (optional) If ``True``, return false when the computation fails. Otherwise,...	[ "def", "recompute", "(", "self", ",", "quiet", "=", "False", ",", "", "", "kwargs", ")", ":", "if", "not", "self", ".", "computed", ":", "if", "not", "(", "hasattr", "(", "self", ",", "\"_x\"", ")", "and", "hasattr", "(", "self", ",", "\"_yerr2\"...	41.318182	20.863636
def __intermediate_htmode(self, radio): """ only for mac80211 driver """ protocol = radio.pop('protocol') channel_width = radio.pop('channel_width') # allow overriding htmode if 'htmode' in radio: return radio['htmode'] if protocol == '802.11n'...	[ "def", "__intermediate_htmode", "(", "self", ",", "radio", ")", ":", "protocol", "=", "radio", ".", "pop", "(", "'protocol'", ")", "channel_width", "=", "radio", ".", "pop", "(", "'channel_width'", ")", "# allow overriding htmode", "if", "'htmode'", "in", "rad...	32.4	7.333333
def get_repos(self, since=github.GithubObject.NotSet): """ :calls: `GET /repositories <http://developer.github.com/v3/repos/#list-all-public-repositories>`_ :param since: integer :rtype: :class:`github.PaginatedList.PaginatedList` of :class:`github.Repository.Repository` """ ...	[ "def", "get_repos", "(", "self", ",", "since", "=", "github", ".", "GithubObject", ".", "NotSet", ")", ":", "assert", "since", "is", "github", ".", "GithubObject", ".", "NotSet", "or", "isinstance", "(", "since", ",", "(", "int", ",", "long", ")", ")",...	44.3125	18.9375
def _series_col_letter(self, series): """ The letter of the Excel worksheet column in which the data for a series appears. """ column_number = 1 + series.categories.depth + series.index return self._column_reference(column_number)	[ "def", "_series_col_letter", "(", "self", ",", "series", ")", ":", "column_number", "=", "1", "+", "series", ".", "categories", ".", "depth", "+", "series", ".", "index", "return", "self", ".", "_column_reference", "(", "column_number", ")" ]	38.857143	12.857143
def table(contents, heading=True, colw=None, cwunit='dxa', tblw=0, twunit='auto', borders={}, celstyle=None): """ Return a table element based on specified parameters @param list contents: A list of lists describing contents. Every item in the list can be a string or a v...	[ "def", "table", "(", "contents", ",", "heading", "=", "True", ",", "colw", "=", "None", ",", "cwunit", "=", "'dxa'", ",", "tblw", "=", "0", ",", "twunit", "=", "'auto'", ",", "borders", "=", "{", "}", ",", "celstyle", "=", "None", ")", ":", "tabl...	44.296296	16.311111
def CheckForCopyright(filename, lines, error): """Logs an error if no Copyright message appears at the top of the file.""" # We'll say it should occur by line 10. Don't forget there's a # dummy line at the front. for line in range(1, min(len(lines), 11)): if re.search(r'Copyright', lines[line], re.I): brea...	[ "def", "CheckForCopyright", "(", "filename", ",", "lines", ",", "error", ")", ":", "# We'll say it should occur by line 10. Don't forget there's a", "# dummy line at the front.", "for", "line", "in", "range", "(", "1", ",", "min", "(", "len", "(", "lines", ")", ",",...	48.909091	15
def load_labware_by_name(self, name: str) -> Labware: """ Specify the presence of a piece of labware on the module. :param name: The name of the labware object. :returns: The initialized and loaded labware object. """ lw = load(name, self._geometry.location) return self....	[ "def", "load_labware_by_name", "(", "self", ",", "name", ":", "str", ")", "->", "Labware", ":", "lw", "=", "load", "(", "name", ",", "self", ".", "_geometry", ".", "location", ")", "return", "self", ".", "load_labware", "(", "lw", ")" ]	41.125	12.125
def read(self, filename): ''' Read a file content. :param string filename: The storage root-relative filename :raises FileNotFound: If the file does not exists ''' if not self.backend.exists(filename): raise FileNotFound(filename) return self.backend....	[ "def", "read", "(", "self", ",", "filename", ")", ":", "if", "not", "self", ".", "backend", ".", "exists", "(", "filename", ")", ":", "raise", "FileNotFound", "(", "filename", ")", "return", "self", ".", "backend", ".", "read", "(", "filename", ")" ]	32.5	17.5
def build(self, construct): """Build a single construct in CLIPS. The Python equivalent of the CLIPS build command. """ if lib.EnvBuild(self._env, construct.encode()) != 1: raise CLIPSError(self._env)	[ "def", "build", "(", "self", ",", "construct", ")", ":", "if", "lib", ".", "EnvBuild", "(", "self", ".", "_env", ",", "construct", ".", "encode", "(", ")", ")", "!=", "1", ":", "raise", "CLIPSError", "(", "self", ".", "_env", ")" ]	29.875	16.375
def diff_parameters(old_params, new_params): """Compares the old vs. new parameters and returns a "diff" If there are no changes, we return an empty list. Args: old_params(dict): old paramters new_params(dict): new parameters Returns: list: A list of differences """ [c...	[ "def", "diff_parameters", "(", "old_params", ",", "new_params", ")", ":", "[", "changes", ",", "diff", "]", "=", "diff_dictionaries", "(", "old_params", ",", "new_params", ")", "if", "changes", "==", "0", ":", "return", "[", "]", "return", "diff" ]	26.0625	18.3125
def reload_module(self, module_name): """Reloads the specified module without changing its ordering. 1. Calls stop(reloading=True) on the module 2. Reloads the Module object into .loaded_modules 3. Calls start(reloading=True) on the new object If called with a module na...	[ "def", "reload_module", "(", "self", ",", "module_name", ")", ":", "module", "=", "self", ".", "loaded_modules", ".", "get", "(", "module_name", ")", "if", "module", ":", "module", ".", "stop", "(", "reloading", "=", "True", ")", "else", ":", "_log", "...	40.285714	19.892857
def _split_addr(addr): """ Splits a str of IP address and port pair into (host, port). Example:: >>> _split_addr('127.0.0.1:6653') ('127.0.0.1', 6653) >>> _split_addr('[::1]:6653') ('::1', 6653) Raises ValueError if invalid format. :param addr: A pair of IP addres...	[ "def", "_split_addr", "(", "addr", ")", ":", "e", "=", "ValueError", "(", "'Invalid IP address and port pair: \"%s\"'", "%", "addr", ")", "pair", "=", "addr", ".", "rsplit", "(", "':'", ",", "1", ")", "if", "len", "(", "pair", ")", "!=", "2", ":", "rai...	24.566667	18.033333
def is_tracking_shield_displayed(self): """Tracking Protection shield. Returns: bool: True or False if the Tracking Shield is displayed. """ with self.selenium.context(self.selenium.CONTEXT_CHROME): if self.window.firefox_version >= 63: # Bug 1471713, 1476218 ...	[ "def", "is_tracking_shield_displayed", "(", "self", ")", ":", "with", "self", ".", "selenium", ".", "context", "(", "self", ".", "selenium", ".", "CONTEXT_CHROME", ")", ":", "if", "self", ".", "window", ".", "firefox_version", ">=", "63", ":", "# Bug 1471713...	44.692308	23.230769
def parse_entry(self, name): """ Parse query entry name, just like: { 'User[]:user' } 'User[]:user' is an entry name. :param name: :return: """ # calculate schema mode # if ':name' or '' or '[]:name' or '[]' found, it'll be t...	[ "def", "parse_entry", "(", "self", ",", "name", ")", ":", "# calculate schema mode", "# if ':name' or '' or '[]:name' or '[]' found, it'll be treat as multiple Schema query", "alias", "=", "name", "if", "':'", "in", "name", ":", "name", ",", "alias", "=", "name", ".", ...	24.375	17.958333
def convert_to_one_hot(y): """ converts y into one hot reprsentation. Parameters ---------- y : list A list containing continous integer values. Returns ------- one_hot : numpy.ndarray A numpy.ndarray object, which is one-hot representation of y. """ max_value ...	[ "def", "convert_to_one_hot", "(", "y", ")", ":", "max_value", "=", "max", "(", "y", ")", "min_value", "=", "min", "(", "y", ")", "length", "=", "len", "(", "y", ")", "one_hot", "=", "numpy", ".", "zeros", "(", "(", "length", ",", "(", "max_value", ...	22.666667	20.47619
def _validatePullParams(MaxObjectCount, context): """ Validate the input paramaters for the PullInstances, PullInstancesWithPath, and PullInstancePaths requests. MaxObjectCount: Must be integer type and ge 0 context: Must be not None and length ge 2 """ if (not isinstance(M...	[ "def", "_validatePullParams", "(", "MaxObjectCount", ",", "context", ")", ":", "if", "(", "not", "isinstance", "(", "MaxObjectCount", ",", "six", ".", "integer_types", ")", "or", "MaxObjectCount", "<", "0", ")", ":", "raise", "ValueError", "(", "_format", "(...	38.611111	16.611111
def parse(self, fo): """ Convert Improbizer output to motifs Parameters ---------- fo : file-like File object containing Improbizer output. Returns ------- motifs : list List of Motif instances. """ motifs ...	[ "def", "parse", "(", "self", ",", "fo", ")", ":", "motifs", "=", "[", "]", "p", "=", "re", ".", "compile", "(", "r'\\d+\\s+@\\s+\\d+\\.\\d+\\s+sd\\s+\\d+\\.\\d+\\s+(\\w+)$'", ")", "line", "=", "fo", ".", "readline", "(", ")", "while", "line", "and", "line"...	31.242424	18.757576
def format_field(self, value, format_spec): """Override :meth:`string.Formatter.format_field` to have our default format_spec for :class:`datetime.Datetime` objects, and to let None yield an empty string rather than ``None``.""" if isinstance(value, datetime) and not format_spec: ...	[ "def", "format_field", "(", "self", ",", "value", ",", "format_spec", ")", ":", "if", "isinstance", "(", "value", ",", "datetime", ")", "and", "not", "format_spec", ":", "return", "super", "(", ")", ".", "format_field", "(", "value", ",", "'%Y-%m-%d_%H-%M-...	53.111111	14.777778
def check_cache(self, vts, counter): """Manually checks the artifact cache (usually immediately before compilation.) Returns true if the cache was hit successfully, indicating that no compilation is necessary. """ if not self.artifact_cache_reads_enabled(): return False cached_vts, _, _ = sel...	[ "def", "check_cache", "(", "self", ",", "vts", ",", "counter", ")", ":", "if", "not", "self", ".", "artifact_cache_reads_enabled", "(", ")", ":", "return", "False", "cached_vts", ",", "_", ",", "_", "=", "self", ".", "check_artifact_cache", "(", "[", "vt...	40.666667	22.333333
def parse_darknet_ann_list_to_cls_box(annotations): """Parse darknet annotation format into two lists for class and bounding box. Input list of [[class, x, y, w, h], ...], return two list of [class ...] and [[x, y, w, h], ...]. Parameters ------------ annotations : list of list A list of c...	[ "def", "parse_darknet_ann_list_to_cls_box", "(", "annotations", ")", ":", "class_list", "=", "[", "]", "bbox_list", "=", "[", "]", "for", "ann", "in", "annotations", ":", "class_list", ".", "append", "(", "ann", "[", "0", "]", ")", "bbox_list", ".", "appen...	26.8	22.8
def from_global_moment_and_saxis(cls, global_moment, saxis): """ Convenience method to initialize Magmom from a given global magnetic moment, i.e. magnetic moment with saxis=(0,0,1), and provided saxis. Method is useful if you do not know the components of your m...	[ "def", "from_global_moment_and_saxis", "(", "cls", ",", "global_moment", ",", "saxis", ")", ":", "magmom", "=", "Magmom", "(", "global_moment", ")", "return", "cls", "(", "magmom", ".", "get_moment", "(", "saxis", "=", "saxis", ")", ",", "saxis", "=", "sax...	37.4	17.4
def subseq(self, start_offset=0, end_offset=None): """ Return a subset of the sequence starting at start_offset (defaulting to the beginning) ending at end_offset (None representing the end, whih is the default) Raises ValueError if duration_64 is missing on any element "...	[ "def", "subseq", "(", "self", ",", "start_offset", "=", "0", ",", "end_offset", "=", "None", ")", ":", "from", "sebastian", ".", "core", "import", "DURATION_64", "def", "subseq_iter", "(", "start_offset", ",", "end_offset", ")", ":", "cur_offset", "=", "0"...	41.346154	16.730769
def ok_for_running(self, cmd_obj, name, nargs): """We separate some of the common debugger command checks here: whether it makes sense to run the command in this execution state, if the command has the right number of arguments and so on. """ if hasattr(cmd_obj, 'execution_set'):...	[ "def", "ok_for_running", "(", "self", ",", "cmd_obj", ",", "name", ",", "nargs", ")", ":", "if", "hasattr", "(", "cmd_obj", ",", "'execution_set'", ")", ":", "if", "not", "(", "self", ".", "core", ".", "execution_status", "in", "cmd_obj", ".", "execution...	49.333333	17.533333
def _add_step(self, step): """Add a step to the workflow. Args: step (Step): a step from the steps library. """ self._closed() self.has_workflow_step = self.has_workflow_step or step.is_workflow self.wf_steps[step.name_in_workflow] = step	[ "def", "_add_step", "(", "self", ",", "step", ")", ":", "self", ".", "_closed", "(", ")", "self", ".", "has_workflow_step", "=", "self", ".", "has_workflow_step", "or", "step", ".", "is_workflow", "self", ".", "wf_steps", "[", "step", ".", "name_in_workflo...	29.1	20
def linkify(self, timeperiods, contacts, services, hosts): """Create link between objects:: * escalation -> host * escalation -> service * escalation -> timeperiods * escalation -> contact :param timeperiods: timeperiods to link :type timeperiods: alignak.ob...	[ "def", "linkify", "(", "self", ",", "timeperiods", ",", "contacts", ",", "services", ",", "hosts", ")", ":", "self", ".", "linkify_with_timeperiods", "(", "timeperiods", ",", "'escalation_period'", ")", "self", ".", "linkify_with_contacts", "(", "contacts", ")",...	37.954545	12.181818
def LAHF(cpu): """ Loads status flags into AH register. Moves the low byte of the EFLAGS register (which includes status flags SF, ZF, AF, PF, and CF) to the AH register. Reserved bits 1, 3, and 5 of the EFLAGS register are set in the AH register:: AH = EFLAGS...	[ "def", "LAHF", "(", "cpu", ")", ":", "used_regs", "=", "(", "cpu", ".", "SF", ",", "cpu", ".", "ZF", ",", "cpu", ".", "AF", ",", "cpu", ".", "PF", ",", "cpu", ".", "CF", ")", "is_expression", "=", "any", "(", "issymbolic", "(", "x", ")", "for...	35.515152	15.333333
def verify_pss_padding(hash_algorithm, salt_length, key_length, message, signature): """ Verifies the PSS padding on an encoded message :param hash_algorithm: The string name of the hash algorithm to use: "sha1", "sha224", "sha256", "sha384", "sha512" :param salt_length: The le...	[ "def", "verify_pss_padding", "(", "hash_algorithm", ",", "salt_length", ",", "key_length", ",", "message", ",", "signature", ")", ":", "if", "_backend", "!=", "'winlegacy'", "and", "sys", ".", "platform", "!=", "'darwin'", ":", "raise", "SystemError", "(", "pr...	28.173228	21.527559
def setup_logging(): """Function to configure log hadlers. .. important:: Configuration, if needed, should be applied before invoking this decorator, as starting the subscriber process for logging will configure the root logger for the child process based on the state of :obj:`...	[ "def", "setup_logging", "(", ")", ":", "logging_configs", "=", "DEFAULT_LOGGING_CONFIG", "new_logging_configs", "=", "bigchaindb", ".", "config", "[", "'log'", "]", "if", "'file'", "in", "new_logging_configs", ":", "filename", "=", "new_logging_configs", "[", "'file...	37.413793	22.482759
def ignore_failed_logs_action(self, request, queryset): """Set FAILED trigger logs in queryset to IGNORED.""" count = _ignore_failed_logs(queryset) self.message_user( request, _('{count} failed trigger logs marked as ignored.').format(count=count), )	[ "def", "ignore_failed_logs_action", "(", "self", ",", "request", ",", "queryset", ")", ":", "count", "=", "_ignore_failed_logs", "(", "queryset", ")", "self", ".", "message_user", "(", "request", ",", "_", "(", "'{count} failed trigger logs marked as ignored.'", ")"...	42.857143	18.428571
def parse_option(self, option, block_name, *values): """ Parse app path values for option. """ # treat arguments as part of the program name (support spaces in name) values = [x.replace(' ', '\\ ') if not x.startswith(os.sep) else x for x in [str(v) for v in values...	[ "def", "parse_option", "(", "self", ",", "option", ",", "block_name", ",", "*", "values", ")", ":", "# treat arguments as part of the program name (support spaces in name)", "values", "=", "[", "x", ".", "replace", "(", "' '", ",", "'\\\\ '", ")", "if", "not", "...	37.153846	19.615385
def __check_looks_like_uri(self, uri): """Checks the URI looks like a RAW uri in github: - 'https://raw.githubusercontent.com/github/hubot/master/README.md' - 'https://github.com/github/hubot/raw/master/README.md' :param uri: uri of the file """ if uri.split('/')[2] == ...	[ "def", "__check_looks_like_uri", "(", "self", ",", "uri", ")", ":", "if", "uri", ".", "split", "(", "'/'", ")", "[", "2", "]", "==", "'raw.githubusercontent.com'", ":", "return", "True", "elif", "uri", ".", "split", "(", "'/'", ")", "[", "2", "]", "=...	39.2	19.2
def market_value(self): """ [float] 市值 """ return sum(account.market_value for account in six.itervalues(self._accounts))	[ "def", "market_value", "(", "self", ")", ":", "return", "sum", "(", "account", ".", "market_value", "for", "account", "in", "six", ".", "itervalues", "(", "self", ".", "_accounts", ")", ")" ]	29.8	17
def js_to_url_function(converter): """Get the JavaScript converter function from a rule.""" if hasattr(converter, 'js_to_url_function'): data = converter.js_to_url_function() else: for cls in getmro(type(converter)): if cls in js_to_url_functions: data = js_to_url...	[ "def", "js_to_url_function", "(", "converter", ")", ":", "if", "hasattr", "(", "converter", ",", "'js_to_url_function'", ")", ":", "data", "=", "converter", ".", "js_to_url_function", "(", ")", "else", ":", "for", "cls", "in", "getmro", "(", "type", "(", "...	38	10.333333
def walk_code(co, _prefix=''): """ Traverse a code object, finding all consts which are also code objects. Yields pairs of (name, code object). """ name = _prefix + co.co_name yield name, co yield from chain.from_iterable( walk_code(c, _prefix=_extend_name(name, co)) for c i...	[ "def", "walk_code", "(", "co", ",", "_prefix", "=", "''", ")", ":", "name", "=", "_prefix", "+", "co", ".", "co_name", "yield", "name", ",", "co", "yield", "from", "chain", ".", "from_iterable", "(", "walk_code", "(", "c", ",", "_prefix", "=", "_exte...	27.923077	14.230769
def d_acquisition_function(self, x): """ Returns the gradient of the acquisition function at x. """ x = np.atleast_2d(x) if self.transform=='softplus': fval = -self.acq.acquisition_function(x)[:,0] scale = 1./(np.log1p(np.exp(fval))*(1.+np.exp(-fval))) ...	[ "def", "d_acquisition_function", "(", "self", ",", "x", ")", ":", "x", "=", "np", ".", "atleast_2d", "(", "x", ")", "if", "self", ".", "transform", "==", "'softplus'", ":", "fval", "=", "-", "self", ".", "acq", ".", "acquisition_function", "(", "x", ...	37.761905	19.571429
def plot(x, y, z, ax=None, **kwargs): r""" Plot iso-probability mass function, converted to sigmas. Parameters ---------- x, y, z : numpy arrays Same as arguments to :func:`matplotlib.pyplot.contour` ax: axes object, optional :class:`matplotlib.axes._subplots.AxesSubplot` to pl...	[ "def", "plot", "(", "x", ",", "y", ",", "z", ",", "ax", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "ax", "is", "None", ":", "ax", "=", "matplotlib", ".", "pyplot", ".", "gca", "(", ")", "# Get inputs", "colors", "=", "kwargs", ".", ...	32.62	21.43

def read_text_from_conll_file( file_name, layer_name=LAYER_CONLL, **kwargs ): ''' Reads the CONLL format syntactic analysis from given file, and returns as a Text object. The Text object has been tokenized for paragraphs, sentences, words, and it contains syntactic analyses aligne...

[ "def", "read_text_from_conll_file", "(", "file_name", ",", "layer_name", "=", "LAYER_CONLL", ",", "*", "*", "kwargs", ")", ":", "# 1) Load conll analysed text from file", "conll_lines", "=", "[", "]", "in_f", "=", "codecs", ".", "open", "(", "file_name", ",", "m...

40.012658

20.924051

def create_groups(orientations, *groups, **kwargs): """ Create groups of an orientation measurement dataset """ grouped = [] # Copy all datasets to be safe (this could be bad for # memory usage, so can be disabled). if kwargs.pop('copy', True): orientations = [copy(o) for o in orient...

[ "def", "create_groups", "(", "orientations", ",", "*", "groups", ",", "*", "*", "kwargs", ")", ":", "grouped", "=", "[", "]", "# Copy all datasets to be safe (this could be bad for", "# memory usage, so can be disabled).", "if", "kwargs", ".", "pop", "(", "'copy'", ...

31.189189

16.594595

def _SkipFieldContents(tokenizer): """Skips over contents (value or message) of a field. Args: tokenizer: A tokenizer to parse the field name and values. """ # Try to guess the type of this field. # If this field is not a message, there should be a ":" between the # field name and the field value and a...

[ "def", "_SkipFieldContents", "(", "tokenizer", ")", ":", "# Try to guess the type of this field.", "# If this field is not a message, there should be a \":\" between the", "# field name and the field value and also the field value should not", "# start with \"{\" or \"<\" which indicates the begin...

41.647059

18.117647

def bulk_modify(self, *filters_or_records, **kwargs): """Shortcut to bulk modify records .. versionadded:: 2.17.0 Args: *filters_or_records (tuple) or (Record): Either a list of Records, or a list of filters. Keyword Args: values (dict): Diction...

[ "def", "bulk_modify", "(", "self", ",", "*", "filters_or_records", ",", "*", "*", "kwargs", ")", ":", "values", "=", "kwargs", ".", "pop", "(", "'values'", ",", "None", ")", "if", "kwargs", ":", "raise", "ValueError", "(", "'Unexpected arguments: {}'", "."...

36.910714

24.4375

def create_parser(self): """Create the CLI parser.""" parser = argparse.ArgumentParser( description=PROGRAM_DESCRIPTION, formatter_class=argparse.RawDescriptionHelpFormatter, epilog=textwrap.dedent(PROGRAM_EPILOG)) parser.add_argument( 'filename',...

[ "def", "create_parser", "(", "self", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "description", "=", "PROGRAM_DESCRIPTION", ",", "formatter_class", "=", "argparse", ".", "RawDescriptionHelpFormatter", ",", "epilog", "=", "textwrap", ".", "dede...

40.606897

19.668966

def get_pseudo_salt(length, *args): """ generate a pseudo salt (used, if user is wrong) """ temp = "".join([arg for arg in args]) return hash_hexdigest(temp)[:length]

[ "def", "get_pseudo_salt", "(", "length", ",", "*", "args", ")", ":", "temp", "=", "\"\"", ".", "join", "(", "[", "arg", "for", "arg", "in", "args", "]", ")", "return", "hash_hexdigest", "(", "temp", ")", "[", ":", "length", "]" ]

30.166667

2.833333

def _peer_bfd_tx(self, **kwargs): """Return the BFD minimum transmit interval XML. You should not use this method. You probably want `BGP.bfd`. Args: peer_ip (str): Peer IPv4 address for BFD setting. min_tx (str): BFD transmit interval in milliseconds (300, 500,...

[ "def", "_peer_bfd_tx", "(", "self", ",", "*", "*", "kwargs", ")", ":", "method_name", "=", "'rbridge_id_router_router_bgp_router_bgp_attributes_'", "'neighbor_neighbor_ips_neighbor_addr_bfd_interval_min_tx'", "bfd_tx", "=", "getattr", "(", "self", ".", "_rbridge", ",", "m...

34.56

21

def put(self, source, rel_path, metadata=None): '''Copy a file to the repository Args: source: Absolute path to the source file, or a file-like object rel_path: path relative to the root of the repository ''' # This case should probably be deprecated. i...

[ "def", "put", "(", "self", ",", "source", ",", "rel_path", ",", "metadata", "=", "None", ")", ":", "# This case should probably be deprecated.", "if", "not", "isinstance", "(", "rel_path", ",", "basestring", ")", ":", "rel_path", "=", "rel_path", ".", "cache_k...

28.769231

21

def reorder_image(dst_order, src_arr, src_order): """Reorder src_arr, with order of color planes in src_order, as dst_order. """ depth = src_arr.shape[2] if depth != len(src_order): raise ValueError("src_order (%s) does not match array depth (%d)" % ( src_order, depth)) band...

[ "def", "reorder_image", "(", "dst_order", ",", "src_arr", ",", "src_order", ")", ":", "depth", "=", "src_arr", ".", "shape", "[", "2", "]", "if", "depth", "!=", "len", "(", "src_order", ")", ":", "raise", "ValueError", "(", "\"src_order (%s) does not match a...

37.896552

18.655172

def draw_lines(): """ Draws a line between a set of random values """ r = numpy.random.randn(200) fig = pyplot.figure() ax = fig.add_subplot(111) ax.plot(r) ax.grid(True) pyplot.savefig(lines_filename)

[ "def", "draw_lines", "(", ")", ":", "r", "=", "numpy", ".", "random", ".", "randn", "(", "200", ")", "fig", "=", "pyplot", ".", "figure", "(", ")", "ax", "=", "fig", ".", "add_subplot", "(", "111", ")", "ax", ".", "plot", "(", "r", ")", "ax", ...

19

16.666667

def decrypt_filedata(data, keys): '''Decrypts a file from Send''' # The last 16 bytes / 128 bits of data is the GCM tag # https://www.w3.org/TR/WebCryptoAPI/#aes-gcm-operations :- # 7. Let ciphertext be equal to C | T, where '|' denotes concatenation. data.seek(-16, 2) tag = data.read() # n...

[ "def", "decrypt_filedata", "(", "data", ",", "keys", ")", ":", "# The last 16 bytes / 128 bits of data is the GCM tag", "# https://www.w3.org/TR/WebCryptoAPI/#aes-gcm-operations :-", "# 7. Let ciphertext be equal to C | T, where '|' denotes concatenation.", "data", ".", "seek", "(", "-...

30.6

23.8

def decode(cls, phrase): """Calculate hexadecimal representation of the phrase. """ phrase = phrase.split(" ") out = "" for i in range(len(phrase) // 3): word1, word2, word3 = phrase[3*i:3*i+3] w1 = cls.word_list.index(word1) w2 = cls.word_list...

[ "def", "decode", "(", "cls", ",", "phrase", ")", ":", "phrase", "=", "phrase", ".", "split", "(", "\" \"", ")", "out", "=", "\"\"", "for", "i", "in", "range", "(", "len", "(", "phrase", ")", "//", "3", ")", ":", "word1", ",", "word2", ",", "wor...

40.692308

11.692308

def _setup_user_dir(self): """Returns user config dir, create it when it doesn't exist.""" user_dir = self._get_user_dir_path() rules_dir = user_dir.joinpath('rules') if not rules_dir.is_dir(): rules_dir.mkdir(parents=True) self.user_dir = user_dir

[ "def", "_setup_user_dir", "(", "self", ")", ":", "user_dir", "=", "self", ".", "_get_user_dir_path", "(", ")", "rules_dir", "=", "user_dir", ".", "joinpath", "(", "'rules'", ")", "if", "not", "rules_dir", ".", "is_dir", "(", ")", ":", "rules_dir", ".", "...

36.75

9.875

def write(self, data): ''' Write some bytes to the transport. ''' # MUST use a lock here else gevent could raise an exception if 2 # greenlets try to write at the same time. I was hoping that # sendall() would do that blocking for me, but I guess not. May # requir...

[ "def", "write", "(", "self", ",", "data", ")", ":", "# MUST use a lock here else gevent could raise an exception if 2", "# greenlets try to write at the same time. I was hoping that", "# sendall() would do that blocking for me, but I guess not. May", "# require an eventsocket-like buffer to sp...

40.692308

21.615385

def _parse_packet(rawdata): """ Returns a tupel (opcode, minusconf-data). opcode is None if this isn't a -conf packet.""" if (len(rawdata) < len(_MAGIC) + 1) or (_MAGIC != rawdata[:len(_MAGIC)]): # Wrong protocol return (None, None) opcode = rawdata[len(_MAGIC):len(_MAGIC)+1] payload =...

[ "def", "_parse_packet", "(", "rawdata", ")", ":", "if", "(", "len", "(", "rawdata", ")", "<", "len", "(", "_MAGIC", ")", "+", "1", ")", "or", "(", "_MAGIC", "!=", "rawdata", "[", ":", "len", "(", "_MAGIC", ")", "]", ")", ":", "# Wrong protocol", ...

33.090909

20.090909

def comment (self, s, **args): """Write CSV comment.""" self.writeln(s=u"# %s" % s, **args)

[ "def", "comment", "(", "self", ",", "s", ",", "*", "*", "args", ")", ":", "self", ".", "writeln", "(", "s", "=", "u\"# %s\"", "%", "s", ",", "*", "*", "args", ")" ]

35

4.333333

def alignment_to_partials(alignment, missing_data=None): """ Generate a partials dictionary from a treeCl.Alignment """ partials_dict = {} for (name, sequence) in alignment.get_sequences(): datatype = 'dna' if alignment.is_dna() else 'protein' partials_dict[name] = seq_to_partials(sequence, ...

[ "def", "alignment_to_partials", "(", "alignment", ",", "missing_data", "=", "None", ")", ":", "partials_dict", "=", "{", "}", "for", "(", "name", ",", "sequence", ")", "in", "alignment", ".", "get_sequences", "(", ")", ":", "datatype", "=", "'dna'", "if", ...

42.307692

16.153846

def __substitute_replace_pairs(self): """ Substitutes all replace pairs in the source of the stored routine. """ self._set_magic_constants() routine_source = [] i = 0 for line in self._routine_source_code_lines: self._replace['__LINE__'] = "'%d'" % (i...

[ "def", "__substitute_replace_pairs", "(", "self", ")", ":", "self", ".", "_set_magic_constants", "(", ")", "routine_source", "=", "[", "]", "i", "=", "0", "for", "line", "in", "self", ".", "_routine_source_code_lines", ":", "self", ".", "_replace", "[", "'__...

35.055556

16.944444

def _name_with_flags(self, include_restricted, title=None): """Generate the name with flags.""" name = "Special: " if self.special else "" name += self.name if title: name += " - {}".format(title) if include_restricted and self.restricted: name += " (R)" ...

[ "def", "_name_with_flags", "(", "self", ",", "include_restricted", ",", "title", "=", "None", ")", ":", "name", "=", "\"Special: \"", "if", "self", ".", "special", "else", "\"\"", "name", "+=", "self", ".", "name", "if", "title", ":", "name", "+=", "\" -...

40.846154

11.846154

def classify_intersection(intersection, edge_nodes1, edge_nodes2): r"""Determine which curve is on the "inside of the intersection". .. note:: This is a helper used only by :meth:`.Surface.intersect`. This is intended to be a helper for forming a :class:`.CurvedPolygon` from the edge intersect...

[ "def", "classify_intersection", "(", "intersection", ",", "edge_nodes1", ",", "edge_nodes2", ")", ":", "if", "intersection", ".", "s", "==", "1.0", "or", "intersection", ".", "t", "==", "1.0", ":", "raise", "ValueError", "(", "\"Intersection occurs at the end of a...

34.821803

19.098532

def _create_clause_based_dep_links( orig_text, layer=LAYER_CONLL ): ''' Rewrites dependency links in the text from sentence-based linking to clause- based linking: *) words which have their parent outside-the-clause will become root nodes (will obtain link value -1), and ...

[ "def", "_create_clause_based_dep_links", "(", "orig_text", ",", "layer", "=", "LAYER_CONLL", ")", ":", "sent_start_index", "=", "0", "for", "sent_text", "in", "orig_text", ".", "split_by", "(", "SENTENCES", ")", ":", "# 1) Create a mapping: from sentence-based dependenc...

48.608696

19.478261

def element(self): """ :return: the :class:`Element` that contains these attributes. """ return self.adapter.wrap_node( self.impl_element, self.adapter.impl_document, self.adapter)

[ "def", "element", "(", "self", ")", ":", "return", "self", ".", "adapter", ".", "wrap_node", "(", "self", ".", "impl_element", ",", "self", ".", "adapter", ".", "impl_document", ",", "self", ".", "adapter", ")" ]

36.5

14.166667

def list_data_type(type_list): """This function takes a list of format specifiers and returns a list of data types represented by the format specifiers.""" data_type = [] for item in type_list: match = re.match(r"(\d+)(.+)", item) if not match: reps = 1 if item[0]...

[ "def", "list_data_type", "(", "type_list", ")", ":", "data_type", "=", "[", "]", "for", "item", "in", "type_list", ":", "match", "=", "re", ".", "match", "(", "r\"(\\d+)(.+)\"", ",", "item", ")", "if", "not", "match", ":", "reps", "=", "1", "if", "it...

34.785714

9.178571

def build_result(data): """Create a dictionary with the contents of result.json""" more = {} for key, value in data.items(): if key != 'elements': newnode = value else: newnode = {} for el in value: nkey, nvalue = process_node(el) ...

[ "def", "build_result", "(", "data", ")", ":", "more", "=", "{", "}", "for", "key", ",", "value", "in", "data", ".", "items", "(", ")", ":", "if", "key", "!=", "'elements'", ":", "newnode", "=", "value", "else", ":", "newnode", "=", "{", "}", "for...

25.466667

16.933333

def minion_mods( opts, context=None, utils=None, whitelist=None, initial_load=False, loaded_base_name=None, notify=False, static_modules=None, proxy=None): ''' Load execution modules Returns a dictionary of execution modules appropriat...

[ "def", "minion_mods", "(", "opts", ",", "context", "=", "None", ",", "utils", "=", "None", ",", "whitelist", "=", "None", ",", "initial_load", "=", "False", ",", "loaded_base_name", "=", "None", ",", "notify", "=", "False", ",", "static_modules", "=", "N...

35.698795

22.277108

def start(self): ''' Start the actual master. If sub-classed, don't **ever** forget to run: super(YourSubClass, self).start() NOTE: Run any required code before calling `super()`. ''' super(SaltAPI, self).start() if check_user(self.config['user']): ...

[ "def", "start", "(", "self", ")", ":", "super", "(", "SaltAPI", ",", "self", ")", ".", "start", "(", ")", "if", "check_user", "(", "self", ".", "config", "[", "'user'", "]", ")", ":", "log", ".", "info", "(", "'The salt-api is starting up'", ")", "se...

27.5

20.071429

def sign(self, cert, pkey, digest_type=None, data=None, flags=Flags.BINARY): """ Adds another signer to already signed message @param cert - signer's certificate @param pkey - signer's private key @param digest_type - message digest to use as DigestType object ...

[ "def", "sign", "(", "self", ",", "cert", ",", "pkey", ",", "digest_type", "=", "None", ",", "data", "=", "None", ",", "flags", "=", "Flags", ".", "BINARY", ")", ":", "if", "not", "pkey", ".", "cansign", ":", "raise", "ValueError", "(", "\"Specified k...

47

15.888889

def deprecated_for(replace_message): """ Decorate a deprecated function, with info about what to use instead, like: @deprecated_for("toBytes()") def toAscii(arg): ... """ def decorator(to_wrap): @functools.wraps(to_wrap) def wrapper(*args, **kwargs): warnings...

[ "def", "deprecated_for", "(", "replace_message", ")", ":", "def", "decorator", "(", "to_wrap", ")", ":", "@", "functools", ".", "wraps", "(", "to_wrap", ")", "def", "wrapper", "(", "*", "args", ",", "*", "*", "kwargs", ")", ":", "warnings", ".", "warn"...

31.166667

15.5

def setup(self, app): ''' Setup properties from parent app on the command ''' self.logger = app.logger self.shell.logger = self.logger if not self.command_name: raise EmptyCommandNameException() self.app = app self.arguments_declaration = sel...

[ "def", "setup", "(", "self", ",", "app", ")", ":", "self", ".", "logger", "=", "app", ".", "logger", "self", ".", "shell", ".", "logger", "=", "self", ".", "logger", "if", "not", "self", ".", "command_name", ":", "raise", "EmptyCommandNameException", "...

26.222222

17.333333

def solution(events, slots, objective_function=None, solver=None, **kwargs): """Compute a schedule in solution form Parameters ---------- events : list or tuple of :py:class:`resources.Event` instances slots : list or tuple of :py:class:`resources.Slot` instances solver : pulp.s...

[ "def", "solution", "(", "events", ",", "slots", ",", "objective_function", "=", "None", ",", "solver", "=", "None", ",", "*", "*", "kwargs", ")", ":", "shape", "=", "Shape", "(", "len", "(", "events", ")", ",", "len", "(", "slots", ")", ")", "probl...

28.962963

18.425926

def strong(node): """ A bolded section """ o = nodes.strong() for n in MarkDown(node): o += n return o

[ "def", "strong", "(", "node", ")", ":", "o", "=", "nodes", ".", "strong", "(", ")", "for", "n", "in", "MarkDown", "(", "node", ")", ":", "o", "+=", "n", "return", "o" ]

15.875

def explore(args): """Create mapping of sequences of two clusters """ logger.info("reading sequeces") data = load_data(args.json) logger.info("get sequences from json") #get_sequences_from_cluster() c1, c2 = args.names.split(",") seqs, names = get_sequences_from_cluster(c1, c2, data[0]) ...

[ "def", "explore", "(", "args", ")", ":", "logger", ".", "info", "(", "\"reading sequeces\"", ")", "data", "=", "load_data", "(", "args", ".", "json", ")", "logger", ".", "info", "(", "\"get sequences from json\"", ")", "#get_sequences_from_cluster()", "c1", ",...

37.777778

11.833333

def get_rng(obj=None): """ Get a good RNG seeded with time, pid and the object. Args: obj: some object to use to generate random seed. Returns: np.random.RandomState: the RNG. """ seed = (id(obj) + os.getpid() + int(datetime.now().strftime("%Y%m%d%H%M%S%f"))) % 42949...

[ "def", "get_rng", "(", "obj", "=", "None", ")", ":", "seed", "=", "(", "id", "(", "obj", ")", "+", "os", ".", "getpid", "(", ")", "+", "int", "(", "datetime", ".", "now", "(", ")", ".", "strftime", "(", "\"%Y%m%d%H%M%S%f\"", ")", ")", ")", "%",...

29

15.428571

def chunked_join(iterable, int1, int2, str1, str2, func): """Chunk and join.""" chunks = list(chunked(iterable, int1)) logging.debug(chunks) groups = [list(chunked(chunk, int2)) for chunk in chunks] logging.debug(groups) return str1.join([ str2.join([func(''.join(chunk)) for chunk in chu...

[ "def", "chunked_join", "(", "iterable", ",", "int1", ",", "int2", ",", "str1", ",", "str2", ",", "func", ")", ":", "chunks", "=", "list", "(", "chunked", "(", "iterable", ",", "int1", ")", ")", "logging", ".", "debug", "(", "chunks", ")", "groups", ...

35.2

15.5

def get_files(path, ext=[], include=True): """遍历提供的文件夹的所有子文件夹，饭后生成器对象。 :param str path: 待处理的文件夹。 :param list ext: 扩展名列表。 :param bool include: 若值为 True，代表 ext 提供的是包含列表；否则是排除列表。 :returns: 一个生成器对象。 """ has_ext = len(ext)>0 for p, d, fs in os.walk(path): ...

[ "def", "get_files", "(", "path", ",", "ext", "=", "[", "]", ",", "include", "=", "True", ")", ":", "has_ext", "=", "len", "(", "ext", ")", ">", "0", "for", "p", ",", "d", ",", "fs", "in", "os", ".", "walk", "(", "path", ")", ":", "for", "f"...

29.416667

11.083333

def iter_logical_lines(self, blob): """Returns an iterator of (start_line, stop_line, indent) for logical lines """ indent_stack = [] contents = [] line_number_start = None for token in self.iter_tokens(blob): token_type, token_text, token_start = token[0:3] if token_type == tokenize.IND...

[ "def", "iter_logical_lines", "(", "self", ",", "blob", ")", ":", "indent_stack", "=", "[", "]", "contents", "=", "[", "]", "line_number_start", "=", "None", "for", "token", "in", "self", ".", "iter_tokens", "(", "blob", ")", ":", "token_type", ",", "toke...

38.92

10.32

def payload_body(req): """ A generator that will include the sha256 signature of the request's body in the JWT payload. This is only done if the request could have a body: if the method is POST or PUT. >>> auth = JWTAuth('secret') >>> auth.add_field('body', payload_body) """ to_hash = ...

[ "def", "payload_body", "(", "req", ")", ":", "to_hash", "=", "req", ".", "body", "if", "type", "(", "req", ".", "body", ")", "is", "bytes", "else", "req", ".", "body", ".", "encode", "(", "'utf-8'", ")", "if", "req", ".", "method", "in", "(", "'P...

33.625

19.125

def unparse(self, indent_step = 4, max_linelen = 72) : "returns an XML string description of this Introspection tree." out = io.StringIO() def to_string(obj, indent) : tag_name = obj.tag_name attrs = [] for attrname in obj.tag_attrs : attr = ...

[ "def", "unparse", "(", "self", ",", "indent_step", "=", "4", ",", "max_linelen", "=", "72", ")", ":", "out", "=", "io", ".", "StringIO", "(", ")", "def", "to_string", "(", "obj", ",", "indent", ")", ":", "tag_name", "=", "obj", ".", "tag_name", "at...

34.478723

15.946809

def collapse_all(self): """collapse all messages in thread""" for MT in self.messagetrees(): MT.collapse(MT.root) self.focus_selected_message()

[ "def", "collapse_all", "(", "self", ")", ":", "for", "MT", "in", "self", ".", "messagetrees", "(", ")", ":", "MT", ".", "collapse", "(", "MT", ".", "root", ")", "self", ".", "focus_selected_message", "(", ")" ]

35

6

def from_ini(cls, folder, ini_file='fpp.ini', ichrone='mist', recalc=False, refit_trap=False, **kwargs): """ To enable simple usage, initializes a FPPCalculation from a .ini file By default, a file called ``fpp.ini`` will be looked for in the current folder. Also presen...

[ "def", "from_ini", "(", "cls", ",", "folder", ",", "ini_file", "=", "'fpp.ini'", ",", "ichrone", "=", "'mist'", ",", "recalc", "=", "False", ",", "refit_trap", "=", "False", ",", "*", "*", "kwargs", ")", ":", "# Check if all starmodel fits are done.", "# If ...

38.691057

22.186992

def parse(self, uri, defaults=None): """Parse the URI. uri is the uri to parse. defaults is a scheme-dependent list of values to use if there is no value for that part in the supplied URI. The return value is a tuple of scheme-dependent length. """ return tuple(...

[ "def", "parse", "(", "self", ",", "uri", ",", "defaults", "=", "None", ")", ":", "return", "tuple", "(", "[", "self", ".", "scheme_of", "(", "uri", ")", "]", "+", "list", "(", "self", ".", "parser_for", "(", "uri", ")", "(", "defaults", ")", ".",...

38.3

21.1

def get_stacked_rnn(config: RNNConfig, prefix: str, parallel_inputs: bool = False, layers: Optional[Iterable[int]] = None) -> mx.rnn.SequentialRNNCell: """ Returns (stacked) RNN cell given parameters. :param config: rnn configuration. :param prefix: Symbol prefix...

[ "def", "get_stacked_rnn", "(", "config", ":", "RNNConfig", ",", "prefix", ":", "str", ",", "parallel_inputs", ":", "bool", "=", "False", ",", "layers", ":", "Optional", "[", "Iterable", "[", "int", "]", "]", "=", "None", ")", "->", "mx", ".", "rnn", ...

50.913793

29.258621

def _derX(self,x,y): ''' Returns the first derivative of the function with respect to X at each value in (x,y). Only called internally by HARKinterpolator2D._derX. ''' m = len(x) temp = np.zeros((m,self.funcCount)) for j in range(self.funcCount): temp...

[ "def", "_derX", "(", "self", ",", "x", ",", "y", ")", ":", "m", "=", "len", "(", "x", ")", "temp", "=", "np", ".", "zeros", "(", "(", "m", ",", "self", ".", "funcCount", ")", ")", "for", "j", "in", "range", "(", "self", ".", "funcCount", ")...

36.625

16.5

def run(self, args): """Flashes the device connected to the J-Link. Args: self (FlashCommand): the ``FlashCommand`` instance args (Namespace): the arguments passed on the command-line Returns: ``None`` """ kwargs = {} kwargs['path'] = args....

[ "def", "run", "(", "self", ",", "args", ")", ":", "kwargs", "=", "{", "}", "kwargs", "[", "'path'", "]", "=", "args", ".", "file", "[", "0", "]", "kwargs", "[", "'addr'", "]", "=", "args", ".", "addr", "kwargs", "[", "'on_progress'", "]", "=", ...

29.944444

18.111111

def create_app(settings): """Create a new Flask application""" app = Flask(__name__) # Import settings from file for name in dir(settings): value = getattr(settings, name) if not (name.startswith('_') or isinstance(value, ModuleType) or isinstance(value, FunctionType)): ...

[ "def", "create_app", "(", "settings", ")", ":", "app", "=", "Flask", "(", "__name__", ")", "# Import settings from file", "for", "name", "in", "dir", "(", "settings", ")", ":", "value", "=", "getattr", "(", "settings", ",", "name", ")", "if", "not", "(",...

27.875

17.725

def start(self, threaded=True): """Start the data feed. :param threaded: If True, run in a separate thread. """ self.running = True if threaded: self._thread = Thread(target=self._run) self._thread.start() else: self._run()

[ "def", "start", "(", "self", ",", "threaded", "=", "True", ")", ":", "self", ".", "running", "=", "True", "if", "threaded", ":", "self", ".", "_thread", "=", "Thread", "(", "target", "=", "self", ".", "_run", ")", "self", ".", "_thread", ".", "star...

27.090909

14.909091

def with_color_stripped(f): """ A function decorator for applying to `len` or imitators thereof that strips ANSI color sequences from a string before passing it on. If any color sequences are not followed by a reset sequence, an `UnterminatedColorError` is raised. """ @wraps(f) def colo...

[ "def", "with_color_stripped", "(", "f", ")", ":", "@", "wraps", "(", "f", ")", "def", "colored_len", "(", "s", ")", ":", "s2", "=", "re", ".", "sub", "(", "COLOR_BEGIN_RGX", "+", "'(.*?)'", "+", "COLOR_END_RGX", ",", "lambda", "m", ":", "re", ".", ...

35.333333

18.777778

def check_longitude(self, ds): ''' Check variable(s) that define longitude and are defined correctly according to CF. CF §4.2 Variables representing longitude must always explicitly include the units attribute; there is no default value. The recommended unit of longitude is deg...

[ "def", "check_longitude", "(", "self", ",", "ds", ")", ":", "# TODO we already have a check_latitude... I'm sure we can make DRYer", "ret_val", "=", "[", "]", "allowed_lon_units", "=", "[", "'degrees_east'", ",", "'degree_east'", ",", "'degree_e'", ",", "'degrees_e'", "...

49.1875

26.625

def get_mac_address_table_output_has_more(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") get_mac_address_table = ET.Element("get_mac_address_table") config = get_mac_address_table output = ET.SubElement(get_mac_address_table, "output") h...

[ "def", "get_mac_address_table_output_has_more", "(", "self", ",", "*", "*", "kwargs", ")", ":", "config", "=", "ET", ".", "Element", "(", "\"config\"", ")", "get_mac_address_table", "=", "ET", ".", "Element", "(", "\"get_mac_address_table\"", ")", "config", "=",...

40.833333

13.083333

def search_extension(self, limit=100, offset=0, **kw): """Search the list of available extensions.""" response = self.request(E.searchExtensionRequest( E.limit(limit), E.offset(offset), E.withDescription(int(kw.get('with_description', 0))), E.withPrice(in...

[ "def", "search_extension", "(", "self", ",", "limit", "=", "100", ",", "offset", "=", "0", ",", "*", "*", "kw", ")", ":", "response", "=", "self", ".", "request", "(", "E", ".", "searchExtensionRequest", "(", "E", ".", "limit", "(", "limit", ")", "...

41.818182

17.636364

def message_to_dict(msg): """Convert an email message into a dictionary. This function transforms an `email.message.Message` object into a dictionary. Headers are stored as key:value pairs while the body of the message is stored inside `body` key. Body may have two other keys inside, 'plain', for p...

[ "def", "message_to_dict", "(", "msg", ")", ":", "def", "parse_headers", "(", "msg", ")", ":", "headers", "=", "{", "}", "for", "header", ",", "value", "in", "msg", ".", "items", "(", ")", ":", "hv", "=", "[", "]", "for", "text", ",", "charset", "...

34.247059

21.129412

def Start(self): """Issue a request to list the directory.""" self.CallClient( server_stubs.PlistQuery, request=self.args.request, next_state="Receive")

[ "def", "Start", "(", "self", ")", ":", "self", ".", "CallClient", "(", "server_stubs", ".", "PlistQuery", ",", "request", "=", "self", ".", "args", ".", "request", ",", "next_state", "=", "\"Receive\"", ")" ]

29.833333

11.5

def on_key_press(self, symbol, modifiers): """ Pyglet specific key press callback. Forwards and translates the events to the example """ self.example.key_event(symbol, self.keys.ACTION_PRESS)

[ "def", "on_key_press", "(", "self", ",", "symbol", ",", "modifiers", ")", ":", "self", ".", "example", ".", "key_event", "(", "symbol", ",", "self", ".", "keys", ".", "ACTION_PRESS", ")" ]

38.5

7.833333

def are_diphtong(tokenA, tokenB): """ Check (naively) whether the two tokens can form a diphtong. This would be a sequence of vowels of which no more than one is syllabic. Vowel sequences connected with a tie bar would already be handled in tokenise_word, so are not checked for here. Users who want more sophisti...

[ "def", "are_diphtong", "(", "tokenA", ",", "tokenB", ")", ":", "is_short", "=", "lambda", "token", ":", "'◌̯'[1]", " ", "i", "n", "to", "en", "subtokens", "=", "[", "]", "for", "char", "in", "tokenA", "+", "tokenB", ":", "if", "ipa", ".", "is_vowel",...

26.15625

23.09375

def find_modules(import_path, include_packages=False, recursive=False): """Finds all the modules below a package. This can be useful to automatically import all views / controllers so that their metaclasses / function decorators have a chance to register themselves on the application. Packages are...

[ "def", "find_modules", "(", "import_path", ",", "include_packages", "=", "False", ",", "recursive", "=", "False", ")", ":", "module", "=", "import_string", "(", "import_path", ")", "path", "=", "getattr", "(", "module", ",", "\"__path__\"", ",", "None", ")",...

43.266667

20.766667

def f_preset_parameter(self, param_name, *args, **kwargs): """Presets parameter value before a parameter is added. Can be called before parameters are added to the Trajectory in order to change the values that are stored into the parameter on creation. After creation of a parameter, th...

[ "def", "f_preset_parameter", "(", "self", ",", "param_name", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "if", "not", "param_name", ".", "startswith", "(", "'parameters.'", ")", ":", "param_name", "=", "'parameters.'", "+", "param_name", "self", "...

32.894737

28.842105

def clone(self, **kwargs): ''' Clone this context, and return the ChildContextDict ''' child = ChildContextDict(parent=self, threadsafe=self._threadsafe, overrides=kwargs) return child

[ "def", "clone", "(", "self", ",", "*", "*", "kwargs", ")", ":", "child", "=", "ChildContextDict", "(", "parent", "=", "self", ",", "threadsafe", "=", "self", ".", "_threadsafe", ",", "overrides", "=", "kwargs", ")", "return", "child" ]

36.5

27.166667

def add_docs(self, docs): """docs is a list of fields that are a dictionary of name:value for a record.""" return self.query( 'solr', '<add>{}</add>'.format( ''.join([self._format_add(fields) for fields in docs]) ), do_post=True, )

[ "def", "add_docs", "(", "self", ",", "docs", ")", ":", "return", "self", ".", "query", "(", "'solr'", ",", "'<add>{}</add>'", ".", "format", "(", "''", ".", "join", "(", "[", "self", ".", "_format_add", "(", "fields", ")", "for", "fields", "in", "doc...

34.555556

17.444444

def create_auto_scaling_group(AutoScalingGroupName=None, LaunchConfigurationName=None, InstanceId=None, MinSize=None, MaxSize=None, DesiredCapacity=None, DefaultCooldown=None, AvailabilityZones=None, LoadBalancerNames=None, TargetGroupARNs=None, HealthCheckType=None, HealthCheckGracePeriod=None, PlacementGroup=None, VP...

[ "def", "create_auto_scaling_group", "(", "AutoScalingGroupName", "=", "None", ",", "LaunchConfigurationName", "=", "None", ",", "InstanceId", "=", "None", ",", "MinSize", "=", "None", ",", "MaxSize", "=", "None", ",", "DesiredCapacity", "=", "None", ",", "Defaul...

48.980519

38.967532

def _mask_feature_data(feature_data, mask, mask_type): """ Masks values of data feature with a given mask of given mask type. The masking is done by assigning `numpy.nan` value. :param feature_data: Data array which will be masked :type feature_data: numpy.ndarray :param mask: M...

[ "def", "_mask_feature_data", "(", "feature_data", ",", "mask", ",", "mask_type", ")", ":", "if", "mask_type", ".", "is_spatial", "(", ")", "and", "feature_data", ".", "shape", "[", "1", ":", "3", "]", "!=", "mask", ".", "shape", "[", "-", "3", ":", "...

42.315789

21.894737

def set_cognitive_process(self, grade_id): """Sets the cognitive process. arg: grade_id (osid.id.Id): the new cognitive process raise: InvalidArgument - ``grade_id`` is invalid raise: NoAccess - ``grade_id`` cannot be modified raise: NullArgument - ``grade_id`` is ``null``...

[ "def", "set_cognitive_process", "(", "self", ",", "grade_id", ")", ":", "# Implemented from template for osid.resource.ResourceForm.set_avatar_template", "if", "self", ".", "get_cognitive_process_metadata", "(", ")", ".", "is_read_only", "(", ")", ":", "raise", "errors", ...

45

17.5625

def _no_auto_update_getter(self): """:class:`bool`. Boolean controlling whether the :meth:`start_update` method is automatically called by the :meth:`update` method Examples -------- You can disable the automatic update via >>> with data.no_auto_update: ... data.update(time=1)...

[ "def", "_no_auto_update_getter", "(", "self", ")", ":", "if", "getattr", "(", "self", ",", "'_no_auto_update'", ",", "None", ")", "is", "not", "None", ":", "return", "self", ".", "_no_auto_update", "else", ":", "self", ".", "_no_auto_update", "=", "utils", ...

31.608696

17.565217

def _get_all_volumes_paths(conn): ''' Extract the path and backing stores path of all volumes. :param conn: libvirt connection to use ''' volumes = [vol for l in [obj.listAllVolumes() for obj in conn.listAllStoragePools()] for vol in l] return {vol.path(): [path.text for path in ElementTree.fro...

[ "def", "_get_all_volumes_paths", "(", "conn", ")", ":", "volumes", "=", "[", "vol", "for", "l", "in", "[", "obj", ".", "listAllVolumes", "(", ")", "for", "obj", "in", "conn", ".", "listAllStoragePools", "(", ")", "]", "for", "vol", "in", "l", "]", "r...

47.111111

32.222222

def command(self, func): """ Decorator to add a command function to the registry. :param func: command function. """ command = Command(func) self._commands[func.__name__] = command return func

[ "def", "command", "(", "self", ",", "func", ")", ":", "command", "=", "Command", "(", "func", ")", "self", ".", "_commands", "[", "func", ".", "__name__", "]", "=", "command", "return", "func" ]

24.1

15.5

def recompute(self, quiet=False, **kwargs): """ Re-compute a previously computed model. You might want to do this if the kernel parameters change and the kernel is labeled as ``dirty``. :param quiet: (optional) If ``True``, return false when the computation fails. Otherwise,...

[ "def", "recompute", "(", "self", ",", "quiet", "=", "False", ",", "*", "*", "kwargs", ")", ":", "if", "not", "self", ".", "computed", ":", "if", "not", "(", "hasattr", "(", "self", ",", "\"_x\"", ")", "and", "hasattr", "(", "self", ",", "\"_yerr2\"...

41.318182

20.863636

def __intermediate_htmode(self, radio): """ only for mac80211 driver """ protocol = radio.pop('protocol') channel_width = radio.pop('channel_width') # allow overriding htmode if 'htmode' in radio: return radio['htmode'] if protocol == '802.11n'...

[ "def", "__intermediate_htmode", "(", "self", ",", "radio", ")", ":", "protocol", "=", "radio", ".", "pop", "(", "'protocol'", ")", "channel_width", "=", "radio", ".", "pop", "(", "'channel_width'", ")", "# allow overriding htmode", "if", "'htmode'", "in", "rad...

32.4

7.333333

def get_repos(self, since=github.GithubObject.NotSet): """ :calls: `GET /repositories <http://developer.github.com/v3/repos/#list-all-public-repositories>`_ :param since: integer :rtype: :class:`github.PaginatedList.PaginatedList` of :class:`github.Repository.Repository` """ ...

[ "def", "get_repos", "(", "self", ",", "since", "=", "github", ".", "GithubObject", ".", "NotSet", ")", ":", "assert", "since", "is", "github", ".", "GithubObject", ".", "NotSet", "or", "isinstance", "(", "since", ",", "(", "int", ",", "long", ")", ")",...

44.3125

18.9375

def _series_col_letter(self, series): """ The letter of the Excel worksheet column in which the data for a series appears. """ column_number = 1 + series.categories.depth + series.index return self._column_reference(column_number)

[ "def", "_series_col_letter", "(", "self", ",", "series", ")", ":", "column_number", "=", "1", "+", "series", ".", "categories", ".", "depth", "+", "series", ".", "index", "return", "self", ".", "_column_reference", "(", "column_number", ")" ]

38.857143

12.857143

def table(contents, heading=True, colw=None, cwunit='dxa', tblw=0, twunit='auto', borders={}, celstyle=None): """ Return a table element based on specified parameters @param list contents: A list of lists describing contents. Every item in the list can be a string or a v...

[ "def", "table", "(", "contents", ",", "heading", "=", "True", ",", "colw", "=", "None", ",", "cwunit", "=", "'dxa'", ",", "tblw", "=", "0", ",", "twunit", "=", "'auto'", ",", "borders", "=", "{", "}", ",", "celstyle", "=", "None", ")", ":", "tabl...

44.296296

16.311111

def CheckForCopyright(filename, lines, error): """Logs an error if no Copyright message appears at the top of the file.""" # We'll say it should occur by line 10. Don't forget there's a # dummy line at the front. for line in range(1, min(len(lines), 11)): if re.search(r'Copyright', lines[line], re.I): brea...

[ "def", "CheckForCopyright", "(", "filename", ",", "lines", ",", "error", ")", ":", "# We'll say it should occur by line 10. Don't forget there's a", "# dummy line at the front.", "for", "line", "in", "range", "(", "1", ",", "min", "(", "len", "(", "lines", ")", ",",...

48.909091

15

def load_labware_by_name(self, name: str) -> Labware: """ Specify the presence of a piece of labware on the module. :param name: The name of the labware object. :returns: The initialized and loaded labware object. """ lw = load(name, self._geometry.location) return self....

[ "def", "load_labware_by_name", "(", "self", ",", "name", ":", "str", ")", "->", "Labware", ":", "lw", "=", "load", "(", "name", ",", "self", ".", "_geometry", ".", "location", ")", "return", "self", ".", "load_labware", "(", "lw", ")" ]

41.125

12.125

def read(self, filename): ''' Read a file content. :param string filename: The storage root-relative filename :raises FileNotFound: If the file does not exists ''' if not self.backend.exists(filename): raise FileNotFound(filename) return self.backend....

[ "def", "read", "(", "self", ",", "filename", ")", ":", "if", "not", "self", ".", "backend", ".", "exists", "(", "filename", ")", ":", "raise", "FileNotFound", "(", "filename", ")", "return", "self", ".", "backend", ".", "read", "(", "filename", ")" ]

32.5

17.5

def build(self, construct): """Build a single construct in CLIPS. The Python equivalent of the CLIPS build command. """ if lib.EnvBuild(self._env, construct.encode()) != 1: raise CLIPSError(self._env)

[ "def", "build", "(", "self", ",", "construct", ")", ":", "if", "lib", ".", "EnvBuild", "(", "self", ".", "_env", ",", "construct", ".", "encode", "(", ")", ")", "!=", "1", ":", "raise", "CLIPSError", "(", "self", ".", "_env", ")" ]

29.875

16.375

def diff_parameters(old_params, new_params): """Compares the old vs. new parameters and returns a "diff" If there are no changes, we return an empty list. Args: old_params(dict): old paramters new_params(dict): new parameters Returns: list: A list of differences """ [c...

[ "def", "diff_parameters", "(", "old_params", ",", "new_params", ")", ":", "[", "changes", ",", "diff", "]", "=", "diff_dictionaries", "(", "old_params", ",", "new_params", ")", "if", "changes", "==", "0", ":", "return", "[", "]", "return", "diff" ]

26.0625

18.3125

def reload_module(self, module_name): """Reloads the specified module without changing its ordering. 1. Calls stop(reloading=True) on the module 2. Reloads the Module object into .loaded_modules 3. Calls start(reloading=True) on the new object If called with a module na...

[ "def", "reload_module", "(", "self", ",", "module_name", ")", ":", "module", "=", "self", ".", "loaded_modules", ".", "get", "(", "module_name", ")", "if", "module", ":", "module", ".", "stop", "(", "reloading", "=", "True", ")", "else", ":", "_log", "...

40.285714

19.892857

def _split_addr(addr): """ Splits a str of IP address and port pair into (host, port). Example:: >>> _split_addr('127.0.0.1:6653') ('127.0.0.1', 6653) >>> _split_addr('[::1]:6653') ('::1', 6653) Raises ValueError if invalid format. :param addr: A pair of IP addres...

[ "def", "_split_addr", "(", "addr", ")", ":", "e", "=", "ValueError", "(", "'Invalid IP address and port pair: \"%s\"'", "%", "addr", ")", "pair", "=", "addr", ".", "rsplit", "(", "':'", ",", "1", ")", "if", "len", "(", "pair", ")", "!=", "2", ":", "rai...

24.566667

18.033333

def is_tracking_shield_displayed(self): """Tracking Protection shield. Returns: bool: True or False if the Tracking Shield is displayed. """ with self.selenium.context(self.selenium.CONTEXT_CHROME): if self.window.firefox_version >= 63: # Bug 1471713, 1476218 ...

[ "def", "is_tracking_shield_displayed", "(", "self", ")", ":", "with", "self", ".", "selenium", ".", "context", "(", "self", ".", "selenium", ".", "CONTEXT_CHROME", ")", ":", "if", "self", ".", "window", ".", "firefox_version", ">=", "63", ":", "# Bug 1471713...

44.692308

23.230769

def parse_entry(self, name): """ Parse query entry name, just like: { 'User[]:user' } 'User[]:user' is an entry name. :param name: :return: """ # calculate schema mode # if ':name' or '' or '[]:name' or '[]' found, it'll be t...

[ "def", "parse_entry", "(", "self", ",", "name", ")", ":", "# calculate schema mode", "# if ':name' or '' or '[]:name' or '[]' found, it'll be treat as multiple Schema query", "alias", "=", "name", "if", "':'", "in", "name", ":", "name", ",", "alias", "=", "name", ".", ...

24.375

17.958333

def convert_to_one_hot(y): """ converts y into one hot reprsentation. Parameters ---------- y : list A list containing continous integer values. Returns ------- one_hot : numpy.ndarray A numpy.ndarray object, which is one-hot representation of y. """ max_value ...

[ "def", "convert_to_one_hot", "(", "y", ")", ":", "max_value", "=", "max", "(", "y", ")", "min_value", "=", "min", "(", "y", ")", "length", "=", "len", "(", "y", ")", "one_hot", "=", "numpy", ".", "zeros", "(", "(", "length", ",", "(", "max_value", ...

22.666667

20.47619

def _validatePullParams(MaxObjectCount, context): """ Validate the input paramaters for the PullInstances, PullInstancesWithPath, and PullInstancePaths requests. MaxObjectCount: Must be integer type and ge 0 context: Must be not None and length ge 2 """ if (not isinstance(M...

[ "def", "_validatePullParams", "(", "MaxObjectCount", ",", "context", ")", ":", "if", "(", "not", "isinstance", "(", "MaxObjectCount", ",", "six", ".", "integer_types", ")", "or", "MaxObjectCount", "<", "0", ")", ":", "raise", "ValueError", "(", "_format", "(...

38.611111

16.611111

def parse(self, fo): """ Convert Improbizer output to motifs Parameters ---------- fo : file-like File object containing Improbizer output. Returns ------- motifs : list List of Motif instances. """ motifs ...

[ "def", "parse", "(", "self", ",", "fo", ")", ":", "motifs", "=", "[", "]", "p", "=", "re", ".", "compile", "(", "r'\\d+\\s+@\\s+\\d+\\.\\d+\\s+sd\\s+\\d+\\.\\d+\\s+(\\w+)$'", ")", "line", "=", "fo", ".", "readline", "(", ")", "while", "line", "and", "line"...

31.242424

18.757576

def format_field(self, value, format_spec): """Override :meth:`string.Formatter.format_field` to have our default format_spec for :class:`datetime.Datetime` objects, and to let None yield an empty string rather than ``None``.""" if isinstance(value, datetime) and not format_spec: ...

[ "def", "format_field", "(", "self", ",", "value", ",", "format_spec", ")", ":", "if", "isinstance", "(", "value", ",", "datetime", ")", "and", "not", "format_spec", ":", "return", "super", "(", ")", ".", "format_field", "(", "value", ",", "'%Y-%m-%d_%H-%M-...

53.111111

14.777778

def check_cache(self, vts, counter): """Manually checks the artifact cache (usually immediately before compilation.) Returns true if the cache was hit successfully, indicating that no compilation is necessary. """ if not self.artifact_cache_reads_enabled(): return False cached_vts, _, _ = sel...

[ "def", "check_cache", "(", "self", ",", "vts", ",", "counter", ")", ":", "if", "not", "self", ".", "artifact_cache_reads_enabled", "(", ")", ":", "return", "False", "cached_vts", ",", "_", ",", "_", "=", "self", ".", "check_artifact_cache", "(", "[", "vt...

40.666667

22.333333

def parse_darknet_ann_list_to_cls_box(annotations): """Parse darknet annotation format into two lists for class and bounding box. Input list of [[class, x, y, w, h], ...], return two list of [class ...] and [[x, y, w, h], ...]. Parameters ------------ annotations : list of list A list of c...

[ "def", "parse_darknet_ann_list_to_cls_box", "(", "annotations", ")", ":", "class_list", "=", "[", "]", "bbox_list", "=", "[", "]", "for", "ann", "in", "annotations", ":", "class_list", ".", "append", "(", "ann", "[", "0", "]", ")", "bbox_list", ".", "appen...

26.8

22.8

def from_global_moment_and_saxis(cls, global_moment, saxis): """ Convenience method to initialize Magmom from a given global magnetic moment, i.e. magnetic moment with saxis=(0,0,1), and provided saxis. Method is useful if you do not know the components of your m...

[ "def", "from_global_moment_and_saxis", "(", "cls", ",", "global_moment", ",", "saxis", ")", ":", "magmom", "=", "Magmom", "(", "global_moment", ")", "return", "cls", "(", "magmom", ".", "get_moment", "(", "saxis", "=", "saxis", ")", ",", "saxis", "=", "sax...

37.4

17.4

def subseq(self, start_offset=0, end_offset=None): """ Return a subset of the sequence starting at start_offset (defaulting to the beginning) ending at end_offset (None representing the end, whih is the default) Raises ValueError if duration_64 is missing on any element "...

[ "def", "subseq", "(", "self", ",", "start_offset", "=", "0", ",", "end_offset", "=", "None", ")", ":", "from", "sebastian", ".", "core", "import", "DURATION_64", "def", "subseq_iter", "(", "start_offset", ",", "end_offset", ")", ":", "cur_offset", "=", "0"...

41.346154

16.730769

def ok_for_running(self, cmd_obj, name, nargs): """We separate some of the common debugger command checks here: whether it makes sense to run the command in this execution state, if the command has the right number of arguments and so on. """ if hasattr(cmd_obj, 'execution_set'):...

[ "def", "ok_for_running", "(", "self", ",", "cmd_obj", ",", "name", ",", "nargs", ")", ":", "if", "hasattr", "(", "cmd_obj", ",", "'execution_set'", ")", ":", "if", "not", "(", "self", ".", "core", ".", "execution_status", "in", "cmd_obj", ".", "execution...

49.333333

17.533333

def _add_step(self, step): """Add a step to the workflow. Args: step (Step): a step from the steps library. """ self._closed() self.has_workflow_step = self.has_workflow_step or step.is_workflow self.wf_steps[step.name_in_workflow] = step

[ "def", "_add_step", "(", "self", ",", "step", ")", ":", "self", ".", "_closed", "(", ")", "self", ".", "has_workflow_step", "=", "self", ".", "has_workflow_step", "or", "step", ".", "is_workflow", "self", ".", "wf_steps", "[", "step", ".", "name_in_workflo...

29.1

20

def linkify(self, timeperiods, contacts, services, hosts): """Create link between objects:: * escalation -> host * escalation -> service * escalation -> timeperiods * escalation -> contact :param timeperiods: timeperiods to link :type timeperiods: alignak.ob...

[ "def", "linkify", "(", "self", ",", "timeperiods", ",", "contacts", ",", "services", ",", "hosts", ")", ":", "self", ".", "linkify_with_timeperiods", "(", "timeperiods", ",", "'escalation_period'", ")", "self", ".", "linkify_with_contacts", "(", "contacts", ")",...

37.954545

12.181818

def LAHF(cpu): """ Loads status flags into AH register. Moves the low byte of the EFLAGS register (which includes status flags SF, ZF, AF, PF, and CF) to the AH register. Reserved bits 1, 3, and 5 of the EFLAGS register are set in the AH register:: AH = EFLAGS...

[ "def", "LAHF", "(", "cpu", ")", ":", "used_regs", "=", "(", "cpu", ".", "SF", ",", "cpu", ".", "ZF", ",", "cpu", ".", "AF", ",", "cpu", ".", "PF", ",", "cpu", ".", "CF", ")", "is_expression", "=", "any", "(", "issymbolic", "(", "x", ")", "for...

35.515152

15.333333

def verify_pss_padding(hash_algorithm, salt_length, key_length, message, signature): """ Verifies the PSS padding on an encoded message :param hash_algorithm: The string name of the hash algorithm to use: "sha1", "sha224", "sha256", "sha384", "sha512" :param salt_length: The le...

[ "def", "verify_pss_padding", "(", "hash_algorithm", ",", "salt_length", ",", "key_length", ",", "message", ",", "signature", ")", ":", "if", "_backend", "!=", "'winlegacy'", "and", "sys", ".", "platform", "!=", "'darwin'", ":", "raise", "SystemError", "(", "pr...

28.173228

21.527559

def setup_logging(): """Function to configure log hadlers. .. important:: Configuration, if needed, should be applied before invoking this decorator, as starting the subscriber process for logging will configure the root logger for the child process based on the state of :obj:`...

[ "def", "setup_logging", "(", ")", ":", "logging_configs", "=", "DEFAULT_LOGGING_CONFIG", "new_logging_configs", "=", "bigchaindb", ".", "config", "[", "'log'", "]", "if", "'file'", "in", "new_logging_configs", ":", "filename", "=", "new_logging_configs", "[", "'file...

37.413793

22.482759

def ignore_failed_logs_action(self, request, queryset): """Set FAILED trigger logs in queryset to IGNORED.""" count = _ignore_failed_logs(queryset) self.message_user( request, _('{count} failed trigger logs marked as ignored.').format(count=count), )

[ "def", "ignore_failed_logs_action", "(", "self", ",", "request", ",", "queryset", ")", ":", "count", "=", "_ignore_failed_logs", "(", "queryset", ")", "self", ".", "message_user", "(", "request", ",", "_", "(", "'{count} failed trigger logs marked as ignored.'", ")"...

42.857143

18.428571

def parse_option(self, option, block_name, *values): """ Parse app path values for option. """ # treat arguments as part of the program name (support spaces in name) values = [x.replace(' ', '\\ ') if not x.startswith(os.sep) else x for x in [str(v) for v in values...

[ "def", "parse_option", "(", "self", ",", "option", ",", "block_name", ",", "*", "values", ")", ":", "# treat arguments as part of the program name (support spaces in name)", "values", "=", "[", "x", ".", "replace", "(", "' '", ",", "'\\\\ '", ")", "if", "not", "...

37.153846

19.615385

def __check_looks_like_uri(self, uri): """Checks the URI looks like a RAW uri in github: - 'https://raw.githubusercontent.com/github/hubot/master/README.md' - 'https://github.com/github/hubot/raw/master/README.md' :param uri: uri of the file """ if uri.split('/')[2] == ...

[ "def", "__check_looks_like_uri", "(", "self", ",", "uri", ")", ":", "if", "uri", ".", "split", "(", "'/'", ")", "[", "2", "]", "==", "'raw.githubusercontent.com'", ":", "return", "True", "elif", "uri", ".", "split", "(", "'/'", ")", "[", "2", "]", "=...

39.2

19.2

def market_value(self): """ [float] 市值 """ return sum(account.market_value for account in six.itervalues(self._accounts))

[ "def", "market_value", "(", "self", ")", ":", "return", "sum", "(", "account", ".", "market_value", "for", "account", "in", "six", ".", "itervalues", "(", "self", ".", "_accounts", ")", ")" ]

29.8

17

def js_to_url_function(converter): """Get the JavaScript converter function from a rule.""" if hasattr(converter, 'js_to_url_function'): data = converter.js_to_url_function() else: for cls in getmro(type(converter)): if cls in js_to_url_functions: data = js_to_url...

[ "def", "js_to_url_function", "(", "converter", ")", ":", "if", "hasattr", "(", "converter", ",", "'js_to_url_function'", ")", ":", "data", "=", "converter", ".", "js_to_url_function", "(", ")", "else", ":", "for", "cls", "in", "getmro", "(", "type", "(", "...

38

10.333333

def walk_code(co, _prefix=''): """ Traverse a code object, finding all consts which are also code objects. Yields pairs of (name, code object). """ name = _prefix + co.co_name yield name, co yield from chain.from_iterable( walk_code(c, _prefix=_extend_name(name, co)) for c i...

[ "def", "walk_code", "(", "co", ",", "_prefix", "=", "''", ")", ":", "name", "=", "_prefix", "+", "co", ".", "co_name", "yield", "name", ",", "co", "yield", "from", "chain", ".", "from_iterable", "(", "walk_code", "(", "c", ",", "_prefix", "=", "_exte...

27.923077

14.230769

def d_acquisition_function(self, x): """ Returns the gradient of the acquisition function at x. """ x = np.atleast_2d(x) if self.transform=='softplus': fval = -self.acq.acquisition_function(x)[:,0] scale = 1./(np.log1p(np.exp(fval))*(1.+np.exp(-fval))) ...

[ "def", "d_acquisition_function", "(", "self", ",", "x", ")", ":", "x", "=", "np", ".", "atleast_2d", "(", "x", ")", "if", "self", ".", "transform", "==", "'softplus'", ":", "fval", "=", "-", "self", ".", "acq", ".", "acquisition_function", "(", "x", ...

37.761905

19.571429

def plot(x, y, z, ax=None, **kwargs): r""" Plot iso-probability mass function, converted to sigmas. Parameters ---------- x, y, z : numpy arrays Same as arguments to :func:`matplotlib.pyplot.contour` ax: axes object, optional :class:`matplotlib.axes._subplots.AxesSubplot` to pl...

[ "def", "plot", "(", "x", ",", "y", ",", "z", ",", "ax", "=", "None", ",", "*", "*", "kwargs", ")", ":", "if", "ax", "is", "None", ":", "ax", "=", "matplotlib", ".", "pyplot", ".", "gca", "(", ")", "# Get inputs", "colors", "=", "kwargs", ".", ...

32.62

21.43