kejian/codesearchnet-python-pep8-full · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def add_layer_from_env(self): """This function creates a new layer, gets a list of all the current attributes, and attempts to find matching environment variables with the prefix of FJS\_. If matches are found it sets those attributes in the new layer. """ self.add_layer(...	[ "def", "add_layer_from_env", "(", "self", ")", ":", "self", ".", "add_layer", "(", ")", "for", "attribute", "in", "self", ".", "get_attributes", "(", ")", ":", "env_attribute", "=", "os", ".", "environ", ".", "get", "(", "'FJS_{}'", ".", "format", "(", ...	46.909091	0.005703
def remove_entry(self, entry): """! @brief Remove clustering feature from the leaf node. @param[in] entry (cfentry): Clustering feature. """ self.feature -= entry; self.entries.remove(entry);	[ "def", "remove_entry", "(", "self", ",", "entry", ")", ":", "self", ".", "feature", "-=", "entry", "self", ".", "entries", ".", "remove", "(", "entry", ")" ]	27.4	0.024735
def show_bounds(self, mesh=None, bounds=None, show_xaxis=True, show_yaxis=True, show_zaxis=True, show_xlabels=True, show_ylabels=True, show_zlabels=True, italic=False, bold=True, shadow=False, font_size=None, font_family=Non...	[ "def", "show_bounds", "(", "self", ",", "mesh", "=", "None", ",", "bounds", "=", "None", ",", "show_xaxis", "=", "True", ",", "show_yaxis", "=", "True", ",", "show_zaxis", "=", "True", ",", "show_xlabels", "=", "True", ",", "show_ylabels", "=", "True", ...	36.6	0.002365
def commit(self): ''' :param tag: Checks out specified commit. If set to ``None`` the latest commit will be checked out :returns: A list of all commits, descending ''' commit = self._log(num=-1, format='%H') if commit.get('returncode')...	[ "def", "commit", "(", "self", ")", ":", "commit", "=", "self", ".", "_log", "(", "num", "=", "-", "1", ",", "format", "=", "'%H'", ")", "if", "commit", ".", "get", "(", "'returncode'", ")", "==", "0", ":", "return", "commit", ".", "get", "(", "...	29.583333	0.005464
def pipeline_refine(d0, candloc, scaledm=2.1, scalepix=2, scaleuv=1.0, chans=[], returndata=False): """ Reproduces candidate and potentially improves sensitivity through better DM and imaging parameters. scale* parameters enhance sensitivity by making refining dmgrid and images. Other options include: ...	[ "def", "pipeline_refine", "(", "d0", ",", "candloc", ",", "scaledm", "=", "2.1", ",", "scalepix", "=", "2", ",", "scaleuv", "=", "1.0", ",", "chans", "=", "[", "]", ",", "returndata", "=", "False", ")", ":", "import", "rtpipe", ".", "parseparams", "a...	37.21875	0.004089
def tds7_crypt_pass(password): """ Mangle password according to tds rules :param password: Password str :returns: Byte-string with encoded password """ encoded = bytearray(ucs2_codec.encode(password)[0]) for i, ch in enumerate(encoded): encoded[i] = ((ch << 4) & 0xff \| (ch >> 4)) ^ 0xA5...	[ "def", "tds7_crypt_pass", "(", "password", ")", ":", "encoded", "=", "bytearray", "(", "ucs2_codec", ".", "encode", "(", "password", ")", "[", "0", "]", ")", "for", "i", ",", "ch", "in", "enumerate", "(", "encoded", ")", ":", "encoded", "[", "i", "]"...	33	0.00295
def _deconstruct_url(self, url): """ Breaks down URL and returns server and endpoint """ url = url.split("://", 1)[-1] server, endpoint = url.split("/", 1) return (server, endpoint)	[ "def", "_deconstruct_url", "(", "self", ",", "url", ")", ":", "url", "=", "url", ".", "split", "(", "\"://\"", ",", "1", ")", "[", "-", "1", "]", "server", ",", "endpoint", "=", "url", ".", "split", "(", "\"/\"", ",", "1", ")", "return", "(", "...	41.8	0.00939
def _calcQuadSize(corners, aspectRatio): ''' return the size of a rectangle in perspective distortion in [px] DEBUG: PUT THAT BACK IN??:: if aspectRatio is not given is will be determined ''' if aspectRatio > 1: # x is bigger -> reduce y x_length =...	[ "def", "_calcQuadSize", "(", "corners", ",", "aspectRatio", ")", ":", "if", "aspectRatio", ">", "1", ":", "# x is bigger -> reduce y\r", "x_length", "=", "PerspectiveCorrection", ".", "_quadXLength", "(", "corners", ")", "y", "=", "x_length", "/", "aspectRatio", ...	43.214286	0.003236
def WalkTree(top, getChildren: Callable = None, getFirstChild: Callable = None, getNextSibling: Callable = None, yieldCondition: Callable = None, includeTop: bool = False, maxDepth: int = 0xFFFFFFFF): """ Walk a tree not using recursive algorithm. top: a tree node. getChildren: function(treeNode) -> lis...	[ "def", "WalkTree", "(", "top", ",", "getChildren", ":", "Callable", "=", "None", ",", "getFirstChild", ":", "Callable", "=", "None", ",", "getNextSibling", ":", "Callable", "=", "None", ",", "yieldCondition", ":", "Callable", "=", "None", ",", "includeTop", ...	41.794118	0.002406
def get_all(self): """Gets all items in file.""" logger.debug('Fetching items. Path: {data_file}'.format( data_file=self.data_file )) return load_file(self.data_file)	[ "def", "get_all", "(", "self", ")", ":", "logger", ".", "debug", "(", "'Fetching items. Path: {data_file}'", ".", "format", "(", "data_file", "=", "self", ".", "data_file", ")", ")", "return", "load_file", "(", "self", ".", "data_file", ")" ]	29.285714	0.009479
def read_gtf( filepath_or_buffer, expand_attribute_column=True, infer_biotype_column=False, column_converters={}, usecols=None, features=None, chunksize=1024 * 1024): """ Parse a GTF into a dictionary mapping column names to sequences of values. Param...	[ "def", "read_gtf", "(", "filepath_or_buffer", ",", "expand_attribute_column", "=", "True", ",", "infer_biotype_column", "=", "False", ",", "column_converters", "=", "{", "}", ",", "usecols", "=", "None", ",", "features", "=", "None", ",", "chunksize", "=", "10...	40.349398	0.001457
def contains(self, x, y): ''' Return cached bounds of this Grob. If bounds are not cached, render to a meta surface, and keep the meta surface and bounds cached. ''' if self._bounds: return self._bounds record_surface = cairo.RecordingSurface(cairo.CO...	[ "def", "contains", "(", "self", ",", "x", ",", "y", ")", ":", "if", "self", ".", "_bounds", ":", "return", "self", ".", "_bounds", "record_surface", "=", "cairo", ".", "RecordingSurface", "(", "cairo", ".", "CONTENT_COLOR_ALPHA", ",", "(", "-", "1", ",...	32.666667	0.005952
def create(self, subject, displayName, issuerToken, expiration, secret): """Create a new guest issuer using the provided issuer token. This function returns a guest issuer with an api access token. Args: subject(basestring): Unique and public identifier displayName(base...	[ "def", "create", "(", "self", ",", "subject", ",", "displayName", ",", "issuerToken", ",", "expiration", ",", "secret", ")", ":", "check_type", "(", "subject", ",", "basestring", ")", "check_type", "(", "displayName", ",", "basestring", ")", "check_type", "(...	37.255814	0.001217
def start(self, inputs): """Start the process. :param inputs: An instance of `Inputs` describing the process inputs :return: An instance of `Outputs` describing the process outputs """ self.logger.info("Process is starting") outputs = Outputs(self._meta.outputs) ...	[ "def", "start", "(", "self", ",", "inputs", ")", ":", "self", ".", "logger", ".", "info", "(", "\"Process is starting\"", ")", "outputs", "=", "Outputs", "(", "self", ".", "_meta", ".", "outputs", ")", "self", ".", "logger", ".", "info", "(", "\"Proces...	36.541667	0.003333
def set(self, key, value): """ Sets the value for a specific requirement. :param key: Name of requirement to be set :param value: Value to set for requirement key :return: Nothing, modifies requirement """ if key == "tags": self._set_tag(tags=value) ...	[ "def", "set", "(", "self", ",", "key", ",", "value", ")", ":", "if", "key", "==", "\"tags\"", ":", "self", ".", "_set_tag", "(", "tags", "=", "value", ")", "else", ":", "if", "isinstance", "(", "value", ",", "dict", ")", "and", "key", "in", "self...	37.5	0.004878
def in_interactions_iter(self, nbunch=None, t=None): """Return an iterator over the in interactions present in a given snapshot. Edges are returned as tuples in the order (node, neighbor). Parameters ---------- nbunch : iterable container, optional (default= all nodes) ...	[ "def", "in_interactions_iter", "(", "self", ",", "nbunch", "=", "None", ",", "t", "=", "None", ")", ":", "if", "nbunch", "is", "None", ":", "nodes_nbrs_pred", "=", "self", ".", "_pred", ".", "items", "(", ")", "else", ":", "nodes_nbrs_pred", "=", "[", ...	34.041667	0.002974
def revoke_qualification(self, subject_id, qualification_type_id, reason=None): """TODO: Document.""" params = {'SubjectId' : subject_id, 'QualificationTypeId' : qualification_type_id, 'Reason' : reason} return self._process_reques...	[ "def", "revoke_qualification", "(", "self", ",", "subject_id", ",", "qualification_type_id", ",", "reason", "=", "None", ")", ":", "params", "=", "{", "'SubjectId'", ":", "subject_id", ",", "'QualificationTypeId'", ":", "qualification_type_id", ",", "'Reason'", ":...	49.428571	0.017045
def urls(self): """ The decoded URL list for this MIME::Type. The special URL value IANA will be translated into: http://www.iana.org/assignments/media-types/<mediatype>/<subtype> The special URL value RFC### will be translated into: http://www.rfc-editor.org/rfc/rfc#...	[ "def", "urls", "(", "self", ")", ":", "def", "_url", "(", "el", ")", ":", "if", "el", "==", "'IANA'", ":", "return", "IANA_URL", "%", "(", "self", ".", "media_type", ",", "self", ".", "sub_type", ")", "elif", "el", "==", "'LTSW'", ":", "return", ...	39.675	0.005535
def trace(self, item): """Traces a parse element (only enabled in develop).""" if DEVELOP: item.debugActions = ( None, # no start action self._trace_success_action, self._trace_exc_action, ) item.debug = True re...	[ "def", "trace", "(", "self", ",", "item", ")", ":", "if", "DEVELOP", ":", "item", ".", "debugActions", "=", "(", "None", ",", "# no start action", "self", ".", "_trace_success_action", ",", "self", ".", "_trace_exc_action", ",", ")", "item", ".", "debug", ...	32	0.006079
def delete_leaderboard_named(self, leaderboard_name): ''' Delete the named leaderboard. @param leaderboard_name [String] Name of the leaderboard. ''' pipeline = self.redis_connection.pipeline() pipeline.delete(leaderboard_name) pipeline.delete(self._member_data_k...	[ "def", "delete_leaderboard_named", "(", "self", ",", "leaderboard_name", ")", ":", "pipeline", "=", "self", ".", "redis_connection", ".", "pipeline", "(", ")", "pipeline", ".", "delete", "(", "leaderboard_name", ")", "pipeline", ".", "delete", "(", "self", "."...	38.909091	0.004566
def fill_luis_event_properties( self, recognizer_result: RecognizerResult, turn_context: TurnContext, telemetry_properties: Dict[str, str] = None, ) -> Dict[str, str]: """Fills the event properties for LuisResult event for telemetry. These properties are logged when t...	[ "def", "fill_luis_event_properties", "(", "self", ",", "recognizer_result", ":", "RecognizerResult", ",", "turn_context", ":", "TurnContext", ",", "telemetry_properties", ":", "Dict", "[", "str", ",", "str", "]", "=", "None", ",", ")", "->", "Dict", "[", "str"...	45.528571	0.003993
def _segment_lengths(self, relative=False, n=20): """ Returns a list with the lengths of each segment in the path. """ # From nodebox_gl lengths = [] first = True for el in self._get_elements(): if first is True: close_x, close_y = el.x, el.y ...	[ "def", "_segment_lengths", "(", "self", ",", "relative", "=", "False", ",", "n", "=", "20", ")", ":", "# From nodebox_gl", "lengths", "=", "[", "]", "first", "=", "True", "for", "el", "in", "self", ".", "_get_elements", "(", ")", ":", "if", "first", ...	40.617647	0.002829
def path_to_url2(path): """ Convert a path to a file: URL. The path will be made absolute and have quoted path parts. """ path = os.path.normpath(os.path.abspath(path)) drive, path = os.path.splitdrive(path) filepath = path.split(os.path.sep) url = '/'.join([urllib.quote(part) for part ...	[ "def", "path_to_url2", "(", "path", ")", ":", "path", "=", "os", ".", "path", ".", "normpath", "(", "os", ".", "path", ".", "abspath", "(", "path", ")", ")", "drive", ",", "path", "=", "os", ".", "path", ".", "splitdrive", "(", "path", ")", "file...	33.833333	0.002398
def handle(self, args, *kwargs): """ Handle execution of the command. """ cutoff = timezone.now() cutoff -= app_settings.CONFIRMATION_EXPIRATION cutoff -= app_settings.CONFIRMATION_SAVE_PERIOD queryset = models.EmailConfirmation.objects.filter( crea...	[ "def", "handle", "(", "self", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "cutoff", "=", "timezone", ".", "now", "(", ")", "cutoff", "-=", "app_settings", ".", "CONFIRMATION_EXPIRATION", "cutoff", "-=", "app_settings", ".", "CONFIRMATION_SAVE_PERIOD...	27.423077	0.00271
def connect_value(instance, prop, widget, value_range=None, log=False): """ Connect a numerical callback property with a Qt widget representing a value. Parameters ---------- instance : object The class instance that the callback property is attached to prop : str The name of th...	[ "def", "connect_value", "(", "instance", ",", "prop", ",", "widget", ",", "value_range", "=", "None", ",", "log", "=", "False", ")", ":", "if", "log", ":", "if", "value_range", "is", "None", ":", "raise", "ValueError", "(", "\"log option can only be set if v...	36.27451	0.003158
def noisy_moments(self, moments: 'Iterable[cirq.Moment]', system_qubits: Sequence['cirq.Qid'] ) -> Sequence['cirq.OP_TREE']: """Adds possibly stateful noise to a series of moments. Args: moments: The moments to add noise to. system_qubi...	[ "def", "noisy_moments", "(", "self", ",", "moments", ":", "'Iterable[cirq.Moment]'", ",", "system_qubits", ":", "Sequence", "[", "'cirq.Qid'", "]", ")", "->", "Sequence", "[", "'cirq.OP_TREE'", "]", ":", "if", "not", "hasattr", "(", "self", ".", "noisy_moment"...	37.807692	0.003968
def pposition(hd, details=False): """Parse string into angular position. A string containing 2 or 6 numbers is parsed, and the numbers are converted into decimal numbers. In the former case the numbers are assumed to be floats. In the latter case, the numbers are assumed to be sexagesimal. Par...	[ "def", "pposition", "(", "hd", ",", "details", "=", "False", ")", ":", "# :TODO: split two angles based on user entered separator and process each part separately.", "# Split at any character other than a digit, \".\", \"-\", and \"+\".", "p", "=", "re", ".", "split", "(", "r\"[^...	28.876289	0.00069
def _save_file_and_pos(self): """ Save current position into file """ if not self._pos_changed: return with open(self.pos_storage_filename, 'w+') as f: _pos = '%s:%s' % (self._log_file, self._log_pos) _logger.debug('Saving position %s to file %s' ...	[ "def", "_save_file_and_pos", "(", "self", ")", ":", "if", "not", "self", ".", "_pos_changed", ":", "return", "with", "open", "(", "self", ".", "pos_storage_filename", ",", "'w+'", ")", "as", "f", ":", "_pos", "=", "'%s:%s'", "%", "(", "self", ".", "_lo...	39.181818	0.004535
def _conditional_committors(source, sink, waypoint, tprob): """ Computes the conditional committors :math:`q^{ABC^+}` which are is the probability of starting in one state and visiting state B before A while also visiting state C at some point. Note that in the notation of Dickson et. al. this comp...	[ "def", "_conditional_committors", "(", "source", ",", "sink", ",", "waypoint", ",", "tprob", ")", ":", "n_states", "=", "np", ".", "shape", "(", "tprob", ")", "[", "0", "]", "forward_committors", "=", "_committors", "(", "[", "source", "]", ",", "[", "...	32.575758	0.001354
def append(self, key, _item): # type: (Union[Key, str], Any) -> Table """ Appends a (key, item) to the table. """ if not isinstance(_item, Item): _item = item(_item) self._value.append(key, _item) if isinstance(key, Key): key = key.key ...	[ "def", "append", "(", "self", ",", "key", ",", "_item", ")", ":", "# type: (Union[Key, str], Any) -> Table", "if", "not", "isinstance", "(", "_item", ",", "Item", ")", ":", "_item", "=", "item", "(", "_item", ")", "self", ".", "_value", ".", "append", "(...	27.37931	0.002433
def verify_psd_options_multi_ifo(opt, parser, ifos): """Parses the CLI options and verifies that they are consistent and reasonable. Parameters ---------- opt : object Result of parsing the CLI with OptionParser, or any object with the required attributes (psd_model, psd_file, asd_f...	[ "def", "verify_psd_options_multi_ifo", "(", "opt", ",", "parser", ",", "ifos", ")", ":", "for", "ifo", "in", "ifos", ":", "for", "opt_group", "in", "ensure_one_opt_groups", ":", "ensure_one_opt_multi_ifo", "(", "opt", ",", "parser", ",", "ifo", ",", "opt_group...	38.952381	0.005967
def stop(self): """ Stop all threads and modules of the client. :return: """ super(BitfinexWSS, self).stop() log.info("BitfinexWSS.stop(): Stopping client..") log.info("BitfinexWSS.stop(): Joining receiver thread..") try: self.receiver_thread...	[ "def", "stop", "(", "self", ")", ":", "super", "(", "BitfinexWSS", ",", "self", ")", ".", "stop", "(", ")", "log", ".", "info", "(", "\"BitfinexWSS.stop(): Stopping client..\"", ")", "log", ".", "info", "(", "\"BitfinexWSS.stop(): Joining receiver thread..\"", "...	30.74359	0.001617
def indication(self, pdu): """Client requests are queued for delivery.""" if _debug: UDPDirector._debug("indication %r", pdu) # get the destination addr = pdu.pduDestination # get the peer peer = self.peers.get(addr, None) if not peer: peer = self.ac...	[ "def", "indication", "(", "self", ",", "pdu", ")", ":", "if", "_debug", ":", "UDPDirector", ".", "_debug", "(", "\"indication %r\"", ",", "pdu", ")", "# get the destination", "addr", "=", "pdu", ".", "pduDestination", "# get the peer", "peer", "=", "self", "...	27.428571	0.007557
def get_default_view_path(resource): "Returns the dotted path to the default view class." parts = [a.member_name for a in resource.ancestors] +\ [resource.collection_name or resource.member_name] if resource.prefix: parts.insert(-1, resource.prefix) view_file = '%s' % '_'.join(par...	[ "def", "get_default_view_path", "(", "resource", ")", ":", "parts", "=", "[", "a", ".", "member_name", "for", "a", "in", "resource", ".", "ancestors", "]", "+", "[", "resource", ".", "collection_name", "or", "resource", ".", "member_name", "]", "if", "reso...	34.642857	0.002008
def from_filenames(filenames, transformations=None, primitive=True, extend_collection=False): """ Generates a TransformedStructureCollection from a cif, possibly containing multiple structures. Args: filenames: List of strings of the cif files ...	[ "def", "from_filenames", "(", "filenames", ",", "transformations", "=", "None", ",", "primitive", "=", "True", ",", "extend_collection", "=", "False", ")", ":", "allcifs", "=", "[", "]", "for", "fname", "in", "filenames", ":", "with", "open", "(", "fname",...	39.47619	0.003534
def get_migrations_dir(graph): """ Resolve the migrations directory path. Either take the directory from a component of the object graph or by using the metaata's path resolution facilities. """ try: migrations_dir = graph.migrations_dir except (LockedGraphError, NotBoundError): ...	[ "def", "get_migrations_dir", "(", "graph", ")", ":", "try", ":", "migrations_dir", "=", "graph", ".", "migrations_dir", "except", "(", "LockedGraphError", ",", "NotBoundError", ")", ":", "migrations_dir", "=", "graph", ".", "metadata", ".", "get_path", "(", "\...	31.625	0.001919
def filter_permissions(self, search): """Filter given query based on permissions of the user in the request. :param search: ElasticSearch query object """ user = self.request.user if user.is_superuser: return search if user.is_anonymous: user = g...	[ "def", "filter_permissions", "(", "self", ",", "search", ")", ":", "user", "=", "self", ".", "request", ".", "user", "if", "user", ".", "is_superuser", ":", "return", "search", "if", "user", ".", "is_anonymous", ":", "user", "=", "get_anonymous_user", "(",...	33.8	0.004317
def get_mean_and_stddevs(self, sites, rup, dists, imt, stddev_types): """ See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` for spec of input and result values. """ # extracting dictionary of coefficients specific to required #...	[ "def", "get_mean_and_stddevs", "(", "self", ",", "sites", ",", "rup", ",", "dists", ",", "imt", ",", "stddev_types", ")", ":", "# extracting dictionary of coefficients specific to required", "# intensity measure type.", "C", "=", "self", ".", "COEFFS_SSLAB", "[", "imt...	39.324324	0.001341
def create_packages(self): """Create missing packages joining the vendor root to the base of the vendored distribution. For example, given a root at ``/home/jake/dev/pantsbuild/pex`` and a vendored distribution at ``pex/vendor/_vendored/requests`` this method would create the following package files:: ...	[ "def", "create_packages", "(", "self", ")", ":", "for", "index", ",", "_", "in", "enumerate", "(", "self", ".", "_subpath_components", ")", ":", "relpath", "=", "_PACKAGE_COMPONENTS", "+", "self", ".", "_subpath_components", "[", ":", "index", "+", "1", "]...	51	0.009627
def fit(self, X, y, **args): """ The fit method is the primary entry point for the manual alpha selection visualizer. It sets the alpha param for each alpha in the alphas list on the wrapped estimator, then scores the model using the passed in X and y data set. Those scores are t...	[ "def", "fit", "(", "self", ",", "X", ",", "y", ",", "", "", "args", ")", ":", "self", ".", "errors", "=", "[", "]", "for", "alpha", "in", "self", ".", "alphas", ":", "self", ".", "estimator", ".", "set_params", "(", "alpha", "=", "alpha", ")"...	38.3	0.002548
def flattenTrees(root, nodeSelector: Callable[[LNode], bool]): """ Walk all nodes and discover trees of nodes (usually operators) and reduce them to single node with multiple outputs :attention: selected nodes has to have single output and has to be connected to nets with single driver ...	[ "def", "flattenTrees", "(", "root", ",", "nodeSelector", ":", "Callable", "[", "[", "LNode", "]", ",", "bool", "]", ")", ":", "for", "ch", "in", "root", ".", "children", ":", "if", "ch", ".", "children", ":", "flattenTrees", "(", "ch", ",", "nodeSele...	37.238095	0.000831
def write(self, path, prog=None, format='raw'): """Write graph to file in selected format. Given a filename 'path' it will open/create and truncate such file and write on it a representation of the graph defined by the dot object and in the format specified by 'format'. 'path' c...	[ "def", "write", "(", "self", ",", "path", ",", "prog", "=", "None", ",", "format", "=", "'raw'", ")", ":", "if", "prog", "is", "None", ":", "prog", "=", "self", ".", "prog", "fobj", ",", "close", "=", "get_fobj", "(", "path", ",", "'w+b'", ")", ...	33.280702	0.001024
def group_items(items, groupids): r""" Groups a list of items by group id. Args: items (Iterable): a list of items to group groupids (Iterable or Callable): a corresponding list of item groupids or a function mapping an item to a groupid. Returns: dict: groupid_to_i...	[ "def", "group_items", "(", "items", ",", "groupids", ")", ":", "if", "callable", "(", "groupids", ")", ":", "keyfunc", "=", "groupids", "pair_list", "=", "(", "(", "keyfunc", "(", "item", ")", ",", "item", ")", "for", "item", "in", "items", ")", "els...	34.714286	0.003203
def multi_iter(iterable, count=2): """Return `count` independent, thread-safe iterators for `iterable`""" # no need to special-case re-usable, container-like iterables if not isinstance( iterable, ( list, tuple, set, FutureChainResults, ...	[ "def", "multi_iter", "(", "iterable", ",", "count", "=", "2", ")", ":", "# no need to special-case re-usable, container-like iterables", "if", "not", "isinstance", "(", "iterable", ",", "(", "list", ",", "tuple", ",", "set", ",", "FutureChainResults", ",", "collec...	43.083333	0.003788
def get_file_to_bytes(self, share_name, directory_name, file_name, start_range=None, end_range=None, range_get_content_md5=None, progress_callback=None, max_connections=1, max_retries=5, retry_wait=1.0, timeout=None): ''' Dow...	[ "def", "get_file_to_bytes", "(", "self", ",", "share_name", ",", "directory_name", ",", "file_name", ",", "start_range", "=", "None", ",", "end_range", "=", "None", ",", "range_get_content_md5", "=", "None", ",", "progress_callback", "=", "None", ",", "max_conne...	47.086957	0.005728
def memcache_get(self, key, for_cas=False, namespace=None, use_cache=False, deadline=None): """An auto-batching wrapper for memcache.get() or .get_multi(). Args: key: Key to set. This must be a string; no prefix is applied. for_cas: If True, request and store CAS ids on the Cont...	[ "def", "memcache_get", "(", "self", ",", "key", ",", "for_cas", "=", "False", ",", "namespace", "=", "None", ",", "use_cache", "=", "False", ",", "deadline", "=", "None", ")", ":", "if", "not", "isinstance", "(", "key", ",", "basestring", ")", ":", "...	37.846154	0.006938
async def reinvoke(self, *, call_hooks=False, restart=True): """\|coro\| Calls the command again. This is similar to :meth:`~.Context.invoke` except that it bypasses checks, cooldowns, and error handlers. .. note:: If you want to bypass :exc:`.UserInputError` derive...	[ "async", "def", "reinvoke", "(", "self", ",", "*", ",", "call_hooks", "=", "False", ",", "restart", "=", "True", ")", ":", "cmd", "=", "self", ".", "command", "view", "=", "self", ".", "view", "if", "cmd", "is", "None", ":", "raise", "ValueError", ...	35.415094	0.001555
def to_dataframe(self): """Export grid data to dataframes for statistical analysis. The export to dataframe is similar to db tables exported by `export_mv_grid_new`. Returns ------- :pandas:`pandas.DataFrame<dataframe>` Pandas Data Frame See Als...	[ "def", "to_dataframe", "(", "self", ")", ":", "node_cols", "=", "[", "'node_id'", ",", "'grid_id'", ",", "'v_nom'", ",", "'geom'", ",", "'v_res0'", ",", "'v_res1'", ",", "'peak_load'", ",", "'generation_capacity'", ",", "'type'", "]", "edges_cols", "=", "[",...	45.439655	0.003713
def killBatchJobs(self, jobIDs): """ Kills the given jobs, represented as Job ids, then checks they are dead by checking they are not in the list of issued jobs. """ self.killLocalJobs(jobIDs) jobIDs = set(jobIDs) logger.debug('Jobs to be killed: %r', jobIDs) ...	[ "def", "killBatchJobs", "(", "self", ",", "jobIDs", ")", ":", "self", ".", "killLocalJobs", "(", "jobIDs", ")", "jobIDs", "=", "set", "(", "jobIDs", ")", "logger", ".", "debug", "(", "'Jobs to be killed: %r'", ",", "jobIDs", ")", "for", "jobID", "in", "j...	39.9	0.004896
def pls(df): """ A simple implementation of a least-squares approach to imputation using partial least squares regression (PLS). :param df: :return: """ if not sklearn: assert('This library depends on scikit-learn (sklearn) to perform PLS-based imputation') df = df.copy() ...	[ "def", "pls", "(", "df", ")", ":", "if", "not", "sklearn", ":", "assert", "(", "'This library depends on scikit-learn (sklearn) to perform PLS-based imputation'", ")", "df", "=", "df", ".", "copy", "(", ")", "df", "[", "np", ".", "isinf", "(", "df", ")", "]"...	27.489796	0.009319
def convert_to_tflayer_args(args_names, name_mapping): """ After applying this decorator: 1. data_format becomes tf.layers style 2. nl becomes activation 3. initializers are renamed 4. positional args are transformed to corresponding kwargs, according to args_names 5. kwargs are mapped to tf...	[ "def", "convert_to_tflayer_args", "(", "args_names", ",", "name_mapping", ")", ":", "def", "decorator", "(", "func", ")", ":", "@", "functools", ".", "wraps", "(", "func", ")", "def", "decorated_func", "(", "inputs", ",", "", "args", ",", "", "*", "kwa...	37.184211	0.003448
def load_tabs(self): """Loads the tab group. It compiles the table instances for each table attached to any :class:`horizon.tabs.TableTab` instances on the tab group. This step is necessary before processing any tab or table actions. """ tab_group = self.get_tabs(self.re...	[ "def", "load_tabs", "(", "self", ")", ":", "tab_group", "=", "self", ".", "get_tabs", "(", "self", ".", "request", ",", "", "", "self", ".", "kwargs", ")", "tabs", "=", "tab_group", ".", "get_tabs", "(", ")", "for", "tab", "in", "[", "t", "for", ...	48.5	0.00289
def read_data(self, **kwargs): """ get the data from the service :param kwargs: contain keyword args : trigger_id at least :type kwargs: dict :rtype: list """ date_triggered = kwargs.get('date_triggered') trigger_id = kwargs.get('trigger_...	[ "def", "read_data", "(", "self", ",", "", "", "kwargs", ")", ":", "date_triggered", "=", "kwargs", ".", "get", "(", "'date_triggered'", ")", "trigger_id", "=", "kwargs", ".", "get", "(", "'trigger_id'", ")", "kwargs", "[", "'model_name'", "]", "=", "'E...	31.695652	0.002663
def replace_namespaced_daemon_set_status(self, name, namespace, body, **kwargs): # noqa: E501 """replace_namespaced_daemon_set_status # noqa: E501 replace status of the specified DaemonSet # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous H...	[ "def", "replace_namespaced_daemon_set_status", "(", "self", ",", "name", ",", "namespace", ",", "body", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req...	63.04	0.00125
def stop(self): """Stop the daemon.""" pid = None if os.path.exists(self.pidfile): with open(self.pidfile, 'r') as fp: pid = int(fp.read().strip()) if not pid: msg = 'pidfile (%s) does not exist. Daemon not running?\n' sys.stderr.write...	[ "def", "stop", "(", "self", ")", ":", "pid", "=", "None", "if", "os", ".", "path", ".", "exists", "(", "self", ".", "pidfile", ")", ":", "with", "open", "(", "self", ".", "pidfile", ",", "'r'", ")", "as", "fp", ":", "pid", "=", "int", "(", "f...	29.791667	0.00271
def getDefaultUncertainty(self, result=None): """Return the uncertainty value, if the result falls within specified ranges for the service from which this analysis was derived. """ if result is None: result = self.getResult() uncertainties = self.getUncertainties() ...	[ "def", "getDefaultUncertainty", "(", "self", ",", "result", "=", "None", ")", ":", "if", "result", "is", "None", ":", "result", "=", "self", ".", "getResult", "(", ")", "uncertainties", "=", "self", ".", "getUncertainties", "(", ")", "if", "uncertainties",...	37.645161	0.001671
def argrelmin(data, axis=0, order=1, mode='clip'): """ Calculate the relative minima of `data`. .. versionadded:: 0.11.0 Parameters ---------- data : ndarray Array in which to find the relative minima. axis : int, optional Axis over which to select from `data`. Default is ...	[ "def", "argrelmin", "(", "data", ",", "axis", "=", "0", ",", "order", "=", "1", ",", "mode", "=", "'clip'", ")", ":", "return", "argrelextrema", "(", "data", ",", "np", ".", "less", ",", "axis", ",", "order", ",", "mode", ")" ]	27.472222	0.000977
def roc_curve(df, col_true=None, col_pred=None, col_scores=None, pos_label=1): r""" Compute true positive rate (TPR), false positive rate (FPR) and threshold from predicted DataFrame. Note that this method will trigger the defined flow to execute. :param df: predicted data frame :type df: DataFram...	[ "def", "roc_curve", "(", "df", ",", "col_true", "=", "None", ",", "col_pred", "=", "None", ",", "col_scores", "=", "None", ",", "pos_label", "=", "1", ")", ":", "if", "not", "col_pred", ":", "col_pred", "=", "get_field_name_by_role", "(", "df", ",", "F...	36.725	0.002653
def _parse_notes_dict(sbase): """ Creates dictionary of COBRA notes. Parameters ---------- sbase : libsbml.SBase Returns ------- dict of notes """ notes = sbase.getNotesString() if notes and len(notes) > 0: pattern = r"<p>\s(\w+\s\w)\s:\s*([\w\|\s]+)<" matche...	[ "def", "_parse_notes_dict", "(", "sbase", ")", ":", "notes", "=", "sbase", ".", "getNotesString", "(", ")", "if", "notes", "and", "len", "(", "notes", ")", ">", "0", ":", "pattern", "=", "r\"<p>\\s(\\w+\\s\\w)\\s:\\s*([\\w\|\\s]+)<\"", "matches", "=", "re",...	25	0.002028
def lostitem_delete_view(request, item_id): """Delete a lostitem. id: lostitem id """ if request.method == "POST": try: a = LostItem.objects.get(id=item_id) if request.POST.get("full_delete", False): a.delete() messages.success(request, "...	[ "def", "lostitem_delete_view", "(", "request", ",", "item_id", ")", ":", "if", "request", ".", "method", "==", "\"POST\"", ":", "try", ":", "a", "=", "LostItem", ".", "objects", ".", "get", "(", "id", "=", "item_id", ")", "if", "request", ".", "POST", ...	32.043478	0.003953
def GetRDFValueType(self): """Returns this attribute's RDFValue class.""" result = self.attribute_type for field_name in self.field_names: # Support the new semantic protobufs. try: result = result.type_infos.get(field_name).type except AttributeError: raise AttributeError(...	[ "def", "GetRDFValueType", "(", "self", ")", ":", "result", "=", "self", ".", "attribute_type", "for", "field_name", "in", "self", ".", "field_names", ":", "# Support the new semantic protobufs.", "try", ":", "result", "=", "result", ".", "type_infos", ".", "get"...	33.181818	0.010667
def stroke(self,args): '''Set a stroke color, applying it to new paths.''' self._strokecolor = self.color(args) return self._strokecolor	[ "def", "stroke", "(", "self", ",", "", "args", ")", ":", "self", ".", "_strokecolor", "=", "self", ".", "color", "(", "", "args", ")", "return", "self", ".", "_strokecolor" ]	39.75	0.018519
def toBytes(x): ''' x-->unicode string \| bytearray \| bytes Returns-->bytes If x is unicode, MUST have encoding=latin1 ''' if isinstance(x, bytes): return x elif isinstance(x, bytearray): return bytes(x) elif isinstance(x, unicode): pass else: return x ...	[ "def", "toBytes", "(", "x", ")", ":", "if", "isinstance", "(", "x", ",", "bytes", ")", ":", "return", "x", "elif", "isinstance", "(", "x", ",", "bytearray", ")", ":", "return", "bytes", "(", "x", ")", "elif", "isinstance", "(", "x", ",", "unicode",...	26.1875	0.002304
def file_sign( blockchain_id, hostname, input_path, passphrase=None, config_path=CONFIG_PATH, wallet_keys=None ): """ Sign a file with the current blockchain ID's host's public key. @config_path should be for the client, not blockstack-file Return {'status': True, 'sender_key_id': ..., 'sig': ...} on ...	[ "def", "file_sign", "(", "blockchain_id", ",", "hostname", ",", "input_path", ",", "passphrase", "=", "None", ",", "config_path", "=", "CONFIG_PATH", ",", "wallet_keys", "=", "None", ")", ":", "config_dir", "=", "os", ".", "path", ".", "dirname", "(", "con...	46.095238	0.012146
def parse_directive_locations(lexer: Lexer) -> List[NameNode]: """DirectiveLocations""" # optional leading pipe expect_optional_token(lexer, TokenKind.PIPE) locations: List[NameNode] = [] append = locations.append while True: append(parse_directive_location(lexer)) if not expect_...	[ "def", "parse_directive_locations", "(", "lexer", ":", "Lexer", ")", "->", "List", "[", "NameNode", "]", ":", "# optional leading pipe", "expect_optional_token", "(", "lexer", ",", "TokenKind", ".", "PIPE", ")", "locations", ":", "List", "[", "NameNode", "]", ...	35.181818	0.002519
def localize_date(date, city): """ Localize date into city Date: datetime City: timezone city definitio. Example: 'Asia/Qatar', 'America/New York'.. """ local = pytz.timezone(city) local_dt = local.localize(date, is_dst=None) return local_dt	[ "def", "localize_date", "(", "date", ",", "city", ")", ":", "local", "=", "pytz", ".", "timezone", "(", "city", ")", "local_dt", "=", "local", ".", "localize", "(", "date", ",", "is_dst", "=", "None", ")", "return", "local_dt" ]	29.111111	0.003704
def update(self, key, data): """Update document by key with partial data. Updates the document matching _id=<key> with 'data' Where 1st argument 'key' is <key> 'data' may contain dot notation fields in order to specify nested values in the documents, e.g. colle...	[ "def", "update", "(", "self", ",", "key", ",", "data", ")", ":", "if", "key", ":", "spec", "=", "{", "'_id'", ":", "key", "}", "write", "=", "data", ".", "copy", "(", ")", "response", "=", "self", ".", "_collection", ".", "update", "(", "spec", ...	35	0.001738
def grad_log_likelihood(self, y, quiet=False): """ Compute the gradient of the marginalized likelihood The factorized matrix from the previous call to :func:`GP.compute` is used so ``compute`` must be called first. The gradient is taken with respect to the parameters returned by...	[ "def", "grad_log_likelihood", "(", "self", ",", "y", ",", "quiet", "=", "False", ")", ":", "if", "not", "solver", ".", "has_autodiff", "(", ")", ":", "raise", "RuntimeError", "(", "\"celerite must be compiled with autodiff \"", "\"support to use the gradient methods\"...	38.085714	0.000731
def remove_edge(self, p_from, p_to, p_remove_unconnected_nodes=True): """ Removes an edge from the graph. When remove_unconnected_nodes is True, then the nodes are also removed if they become isolated. """ if self.has_edge(p_from, p_to): self._edges[p_from].r...	[ "def", "remove_edge", "(", "self", ",", "p_from", ",", "p_to", ",", "p_remove_unconnected_nodes", "=", "True", ")", ":", "if", "self", ".", "has_edge", "(", "p_from", ",", "p_to", ")", ":", "self", ".", "_edges", "[", "p_from", "]", ".", "remove", "(",...	29.809524	0.003096
async def delete(self, key): """ Fix me after support 204 code in aiohttp """ try: async with self._client.delete(self.path_keys(key)) as r: if r.status not in [204, 404]: return False return True except ContentEncodingError: ...	[ "async", "def", "delete", "(", "self", ",", "key", ")", ":", "try", ":", "async", "with", "self", ".", "_client", ".", "delete", "(", "self", ".", "path_keys", "(", "key", ")", ")", "as", "r", ":", "if", "r", ".", "status", "not", "in", "[", "2...	33.083333	0.007353
def get_object(self, bucket_name, object_name, request_headers=None, sse=None): """ Retrieves an object from a bucket. This function returns an object that contains an open network connection to enable incremental consumption of the response. To re-use the connection (if desired...	[ "def", "get_object", "(", "self", ",", "bucket_name", ",", "object_name", ",", "request_headers", "=", "None", ",", "sse", "=", "None", ")", ":", "is_valid_bucket_name", "(", "bucket_name", ")", "is_non_empty_string", "(", "object_name", ")", "return", "self", ...	41.538462	0.002715
def oauth_login(self, provider, id_column, id, attrs, defaults, redirect_url=None): """Execute a login via oauth. If no user exists, oauth_signup() will be called """ user = self.query.filter(**dict([(id_column, id)])).first() if not redirect_url: redirect_url = request.args....	[ "def", "oauth_login", "(", "self", ",", "provider", ",", "id_column", ",", "id", ",", "attrs", ",", "defaults", ",", "redirect_url", "=", "None", ")", ":", "user", "=", "self", ".", "query", ".", "filter", "(", "", "", "dict", "(", "[", "(", "id_...	56.684211	0.006393
def load(param): """ If the supplied parameter is a string, assum it's a simple pattern. """ return ( Pattern(param) if isinstance(param, str) else param if param is not None else Null() )	[ "def", "load", "(", "param", ")", ":", "return", "(", "Pattern", "(", "param", ")", "if", "isinstance", "(", "param", ",", "str", ")", "else", "param", "if", "param", "is", "not", "None", "else", "Null", "(", ")", ")" ]	22.7	0.004237
def fail(state, msg="fail"): """Always fails the SCT, with an optional msg. This function takes a single argument, ``msg``, that is the feedback given to the student. Note that this would be a terrible idea for grading submissions, but may be useful while writing SCTs. For example, failing a test will ...	[ "def", "fail", "(", "state", ",", "msg", "=", "\"fail\"", ")", ":", "_msg", "=", "state", ".", "build_message", "(", "msg", ")", "state", ".", "report", "(", "Feedback", "(", "_msg", ",", "state", ")", ")", "return", "state" ]	42.909091	0.008299
def to_yaml(self): """Store an instance to the referenced YAML file.""" import yaml with self.__reference__.open('w') as fp: yaml.dump(self.asjsonld(), fp, default_flow_style=False)	[ "def", "to_yaml", "(", "self", ")", ":", "import", "yaml", "with", "self", ".", "__reference__", ".", "open", "(", "'w'", ")", "as", "fp", ":", "yaml", ".", "dump", "(", "self", ".", "asjsonld", "(", ")", ",", "fp", ",", "default_flow_style", "=", ...	35.5	0.009174
def strip_email_quotes(text): """Strip leading email quotation characters ('>'). Removes any combination of leading '>' interspersed with whitespace that appears identically in all lines of the input text. Parameters ---------- text : str Examples -------- Simple uses:: ...	[ "def", "strip_email_quotes", "(", "text", ")", ":", "lines", "=", "text", ".", "splitlines", "(", ")", "matches", "=", "set", "(", ")", "for", "line", "in", "lines", ":", "prefix", "=", "re", ".", "match", "(", "r'^(\\s>[ >])'", ",", "line", ")", "...	27.195652	0.002315
def fit_predict(self, y, exogenous=None, n_periods=10, **fit_args): """Fit an ARIMA to a vector, ``y``, of observations with an optional matrix of ``exogenous`` variables, and then generate predictions. Parameters ---------- y : array-like or iterable, shape=(n_samples,)...	[ "def", "fit_predict", "(", "self", ",", "y", ",", "exogenous", "=", "None", ",", "n_periods", "=", "10", ",", "", "", "fit_args", ")", ":", "self", ".", "fit", "(", "y", ",", "exogenous", ",", "", "", "fit_args", ")", "return", "self", ".", "...	49.310345	0.001372
def get_wulff_shape(self, material_id): """ Constructs a Wulff shape for a material. Args: material_id (str): Materials Project material_id, e.g. 'mp-123'. Returns: pymatgen.analysis.wulff.WulffShape """ from pymatgen.symmetry.analyzer import Spac...	[ "def", "get_wulff_shape", "(", "self", ",", "material_id", ")", ":", "from", "pymatgen", ".", "symmetry", ".", "analyzer", "import", "SpacegroupAnalyzer", "from", "pymatgen", ".", "analysis", ".", "wulff", "import", "WulffShape", ",", "hkl_tuple_to_str", "structur...	45.125	0.001808
def is_port_open(self, port, timeout=2): """ check if given port is open and receiving connections on container ip_address :param port: int, container port :param timeout: int, how many seconds to wait for connection; defaults to 2 :return: True if the connection has been establ...	[ "def", "is_port_open", "(", "self", ",", "port", ",", "timeout", "=", "2", ")", ":", "addresses", "=", "self", ".", "get_IPv4s", "(", ")", "if", "not", "addresses", ":", "return", "False", "return", "check_port", "(", "port", ",", "host", "=", "address...	42.833333	0.009524
def compile(self): """ Compile this expression into an ODPS SQL :return: compiled DAG :rtype: str """ from ..engines import get_default_engine engine = get_default_engine(self) return engine.compile(self)	[ "def", "compile", "(", "self", ")", ":", "from", ".", ".", "engines", "import", "get_default_engine", "engine", "=", "get_default_engine", "(", "self", ")", "return", "engine", ".", "compile", "(", "self", ")" ]	21.666667	0.00738
def _prepare_tokens_for_encode(tokens): """Prepare tokens for encoding. Tokens followed by a single space have "_" appended and the single space token is dropped. If a token is _UNDERSCORE_REPLACEMENT, it is broken up into 2 tokens. Args: tokens: `list<str>`, tokens to prepare. Returns: `list<st...	[ "def", "_prepare_tokens_for_encode", "(", "tokens", ")", ":", "prepared_tokens", "=", "[", "]", "def", "_prepare_token", "(", "t", ",", "next_t", ")", ":", "skip_next", "=", "False", "t", "=", "_escape", "(", "t", ")", "# If next token is a single space, add _ s...	28.413043	0.014053
def set_sources(self, sources): """ Creates GeocodeServiceConfigs from each str source """ if len(sources) == 0: raise Exception('Must declare at least one source for a geocoder') self._sources = [] for source in sources: # iterate through a list of sources ...	[ "def", "set_sources", "(", "self", ",", "sources", ")", ":", "if", "len", "(", "sources", ")", "==", "0", ":", "raise", "Exception", "(", "'Must declare at least one source for a geocoder'", ")", "self", ".", "_sources", "=", "[", "]", "for", "source", "in",...	38.444444	0.00565
def pearson(x, y): """ Correlates row vector x with each row vector in 2D array y. """ data = np.vstack((x, y)) ms = data.mean(axis=1)[(slice(None, None, None), None)] datam = data - ms datass = np.sqrt(np.sum(datam*2, axis=1)) temp = np.dot(datam[1:], datam[0].T) rs = temp / (datass[1:] ...	[ "def", "pearson", "(", "x", ",", "y", ")", ":", "data", "=", "np", ".", "vstack", "(", "(", "x", ",", "y", ")", ")", "ms", "=", "data", ".", "mean", "(", "axis", "=", "1", ")", "[", "(", "slice", "(", "None", ",", "None", ",", "None", ")"...	37.333333	0.002907
def call(cls, iterable, a, kw): """ Calls every item in iterable* with the specified arguments. """ return cls(x(a, *kw) for x in iterable)	[ "def", "call", "(", "cls", ",", "iterable", ",", "", "a", ",", "", "", "kw", ")", ":", "return", "cls", "(", "x", "(", "", "a", ",", "", "", "kw", ")", "for", "x", "in", "iterable", ")" ]	26.166667	0.006173
def load(jwks): """Parse a JWKSet and return a dictionary that maps key IDs on keys.""" sign_keys = {} verify_keys = {} try: keyset = json.loads(jwks) for key in keyset['keys']: for op in key['key_ops']: if op == 'sign': k = sign_keys ...	[ "def", "load", "(", "jwks", ")", ":", "sign_keys", "=", "{", "}", "verify_keys", "=", "{", "}", "try", ":", "keyset", "=", "json", ".", "loads", "(", "jwks", ")", "for", "key", "in", "keyset", "[", "'keys'", "]", ":", "for", "op", "in", "key", ...	42.8	0.003656
def submit(command_filename, workingdir, send_mail = False, username = None): '''Submit the given command filename to the queue. Adapted from the qb3 example.''' return sge_interface.submit(command_filename, workingdir, send_mail = send_mail, username = username)	[ "def", "submit", "(", "command_filename", ",", "workingdir", ",", "send_mail", "=", "False", ",", "username", "=", "None", ")", ":", "return", "sge_interface", ".", "submit", "(", "command_filename", ",", "workingdir", ",", "send_mail", "=", "send_mail", ",", ...	89.666667	0.04059
def devmodel_to_array(model_name, train_fraction=1): """ a standardized method of turning a dev_model object into training and testing arrays Parameters ---------- model_name: dev_model the dev_model object to be interrogated train_fraction: int the fraction to be reserved f...	[ "def", "devmodel_to_array", "(", "model_name", ",", "train_fraction", "=", "1", ")", ":", "model_outputs", "=", "-", "6", "+", "model_name", ".", "Data_summary", ".", "shape", "[", "0", "]", "devmodel", "=", "model_name", "rawdf", "=", "devmodel", ".", "Da...	30.043478	0.000701
def remove(self, pk): """Remove an item from the cart. Parameters ---------- pk : str or int The primary key of the item. Raises ------ ItemNotInCart """ pk = str(pk) try: del self.items[pk] except KeyErro...	[ "def", "remove", "(", "self", ",", "pk", ")", ":", "pk", "=", "str", "(", "pk", ")", "try", ":", "del", "self", ".", "items", "[", "pk", "]", "except", "KeyError", ":", "raise", "ItemNotInCart", "(", "pk", "=", "pk", ")", "self", ".", "update", ...	19.210526	0.005222
def _extract_traceback(text): """Receive a list of strings representing the input from stdin and return the restructured backtrace. This iterates over the output and once it identifies a hopefully genuine identifier, it will start parsing output. In the case the input includes a reraise (a Python 3...	[ "def", "_extract_traceback", "(", "text", ")", ":", "capture", "=", "False", "entries", "=", "[", "]", "all_else", "=", "[", "]", "ignore_trace", "=", "False", "# In python 3, a traceback may includes output from a reraise.", "# e.g, an exception is captured and reraised wi...	38.3	0.000424
def _find_variable(self, pattern, logline): """ Return the variable parts of the code given a tuple of strings pattern. Example: (this, is, a, pattern) -> 'this is a good pattern' -> [good] """ var_subs = [] # find the beginning of the pattern first_index = logli...	[ "def", "_find_variable", "(", "self", ",", "pattern", ",", "logline", ")", ":", "var_subs", "=", "[", "]", "# find the beginning of the pattern", "first_index", "=", "logline", ".", "index", "(", "pattern", "[", "0", "]", ")", "beg_str", "=", "logline", "[",...	40.352941	0.001423
def makefig(code, code_path, output_dir, output_base, config): """ Run a pyplot script code and save the images under output_dir with file names derived from output_base """ # -- Parse format list default_dpi = {'png': 80, 'hires.png': 200, 'pdf': 50} formats = [] for fmt in conf...	[ "def", "makefig", "(", "code", ",", "code_path", ",", "output_dir", ",", "output_base", ",", "config", ")", ":", "# -- Parse format list", "default_dpi", "=", "{", "'png'", ":", "80", ",", "'hires.png'", ":", "200", ",", "'pdf'", ":", "50", "}", "formats",...	30.978261	0.00068
def get_device(_id): """ Pull a device from the API. """ url = DEVICE_URL % _id arequest = requests.get(url, headers=HEADERS) status_code = str(arequest.status_code) if status_code == '401': _LOGGER.error("Token expired.") return False ...	[ "def", "get_device", "(", "_id", ")", ":", "url", "=", "DEVICE_URL", "%", "_id", "arequest", "=", "requests", ".", "get", "(", "url", ",", "headers", "=", "HEADERS", ")", "status_code", "=", "str", "(", "arequest", ".", "status_code", ")", "if", "statu...	30.545455	0.00578
def pop_events(self): ''' Pop all events and return a `collections.deque` object. The returned container can be empty. This method is preferred over `pop_event()` as it is much faster as the lock has to be acquired only once and also avoids running into an infinite loop during event processing. ...	[ "def", "pop_events", "(", "self", ")", ":", "with", "self", ".", "lock", ":", "events", "=", "self", ".", "events", "self", ".", "events", "=", "collections", ".", "deque", "(", ")", "return", "events" ]	32.538462	0.009195
def ver(self, revision): """Clone and change the version.""" c = self.clone() c.version = self._parse_version(self.version) return c	[ "def", "ver", "(", "self", ",", "revision", ")", ":", "c", "=", "self", ".", "clone", "(", ")", "c", ".", "version", "=", "self", ".", "_parse_version", "(", "self", ".", "version", ")", "return", "c" ]	20	0.011976
def sign_execute_deposit(deposit_params, key_pair): """ Function to execute the deposit request by signing the transaction generated by the create deposit function. Execution of this function is as follows:: sign_execute_deposit(deposit_details=create_deposit, key_pair=key_pair) The expected r...	[ "def", "sign_execute_deposit", "(", "deposit_params", ",", "key_pair", ")", ":", "signature", "=", "sign_transaction", "(", "transaction", "=", "deposit_params", "[", "'transaction'", "]", ",", "private_key_hex", "=", "private_key_to_hex", "(", "key_pair", "=", "key...	44.590909	0.00499
def _to_narrow(self, terms, data, mask, dates, assets): """ Convert raw computed pipeline results into a DataFrame for public APIs. Parameters ---------- terms : dict[str -> Term] Dict mapping column names to terms. data : dict[str -> ndarray[ndim=2]] ...	[ "def", "_to_narrow", "(", "self", ",", "terms", ",", "data", ",", "mask", ",", "dates", ",", "assets", ")", ":", "if", "not", "mask", ".", "any", "(", ")", ":", "# Manually handle the empty DataFrame case. This is a workaround", "# to pandas failing to tz_localize a...	40.138462	0.000748
def get_config(self, section=None): """ Return the merged end-user configuration for this command or a specific section if set in `section`. """ config = self.session.config section = self.config_section() if section is None else section try: return config[section] ...	[ "def", "get_config", "(", "self", ",", "section", "=", "None", ")", ":", "config", "=", "self", ".", "session", ".", "config", "section", "=", "self", ".", "config_section", "(", ")", "if", "section", "is", "None", "else", "section", "try", ":", "retur...	40.8	0.004796
def from_file(cls, filename): """ Reads configuration from given path to a file in local file system and returns parsed version of it. :param filename: Path to the YAML file in local file system where the configuration will be read from. :type filename: ...	[ "def", "from_file", "(", "cls", ",", "filename", ")", ":", "instance", "=", "cls", "(", ")", "with", "open", "(", "filename", ",", "\"rb\"", ")", "as", "file_stream", ":", "config_data", "=", "yaml", ".", "load", "(", "file_stream", ")", "instance", "....	30.55	0.003175
def flight_modes(logfile): '''show flight modes for a log file''' print("Processing log %s" % filename) mlog = mavutil.mavlink_connection(filename) mode = "" previous_mode = "" mode_start_timestamp = -1 time_in_mode = {} previous_percent = -1 seconds_per_percent = -1 filesize =...	[ "def", "flight_modes", "(", "logfile", ")", ":", "print", "(", "\"Processing log %s\"", "%", "filename", ")", "mlog", "=", "mavutil", ".", "mavlink_connection", "(", "filename", ")", "mode", "=", "\"\"", "previous_mode", "=", "\"\"", "mode_start_timestamp", "=",...	36.968254	0.005019
def word_count(text, html=True): """ Return the count of words in the given text. If the text is HTML (default True), tags are stripped before counting. Handles punctuation and bad formatting like.this when counting words, but assumes conventions for Latin script languages. May not be reliable for o...	[ "def", "word_count", "(", "text", ",", "html", "=", "True", ")", ":", "if", "html", ":", "text", "=", "_tag_re", ".", "sub", "(", "' '", ",", "text", ")", "text", "=", "_strip_re", ".", "sub", "(", "''", ",", "text", ")", "text", "=", "_punctuati...	40.75	0.008

def add_layer_from_env(self): """This function creates a new layer, gets a list of all the current attributes, and attempts to find matching environment variables with the prefix of FJS\_. If matches are found it sets those attributes in the new layer. """ self.add_layer(...

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46.909091

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def remove_entry(self, entry): """! @brief Remove clustering feature from the leaf node. @param[in] entry (cfentry): Clustering feature. """ self.feature -= entry; self.entries.remove(entry);

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def show_bounds(self, mesh=None, bounds=None, show_xaxis=True, show_yaxis=True, show_zaxis=True, show_xlabels=True, show_ylabels=True, show_zlabels=True, italic=False, bold=True, shadow=False, font_size=None, font_family=Non...

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0.002365

def commit(self): ''' :param tag: Checks out specified commit. If set to ``None`` the latest commit will be checked out :returns: A list of all commits, descending ''' commit = self._log(num=-1, format='%H') if commit.get('returncode')...

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29.583333

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def pipeline_refine(d0, candloc, scaledm=2.1, scalepix=2, scaleuv=1.0, chans=[], returndata=False): """ Reproduces candidate and potentially improves sensitivity through better DM and imaging parameters. scale* parameters enhance sensitivity by making refining dmgrid and images. Other options include: ...

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37.21875

0.004089

def tds7_crypt_pass(password): """ Mangle password according to tds rules :param password: Password str :returns: Byte-string with encoded password """ encoded = bytearray(ucs2_codec.encode(password)[0]) for i, ch in enumerate(encoded): encoded[i] = ((ch << 4) & 0xff | (ch >> 4)) ^ 0xA5...

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def _deconstruct_url(self, url): """ Breaks down URL and returns server and endpoint """ url = url.split("://", 1)[-1] server, endpoint = url.split("/", 1) return (server, endpoint)

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41.8

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def _calcQuadSize(corners, aspectRatio): ''' return the size of a rectangle in perspective distortion in [px] DEBUG: PUT THAT BACK IN??:: if aspectRatio is not given is will be determined ''' if aspectRatio > 1: # x is bigger -> reduce y x_length =...

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def WalkTree(top, getChildren: Callable = None, getFirstChild: Callable = None, getNextSibling: Callable = None, yieldCondition: Callable = None, includeTop: bool = False, maxDepth: int = 0xFFFFFFFF): """ Walk a tree not using recursive algorithm. top: a tree node. getChildren: function(treeNode) -> lis...

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def get_all(self): """Gets all items in file.""" logger.debug('Fetching items. Path: {data_file}'.format( data_file=self.data_file )) return load_file(self.data_file)

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def read_gtf( filepath_or_buffer, expand_attribute_column=True, infer_biotype_column=False, column_converters={}, usecols=None, features=None, chunksize=1024 * 1024): """ Parse a GTF into a dictionary mapping column names to sequences of values. Param...

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def contains(self, x, y): ''' Return cached bounds of this Grob. If bounds are not cached, render to a meta surface, and keep the meta surface and bounds cached. ''' if self._bounds: return self._bounds record_surface = cairo.RecordingSurface(cairo.CO...

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32.666667

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def create(self, subject, displayName, issuerToken, expiration, secret): """Create a new guest issuer using the provided issuer token. This function returns a guest issuer with an api access token. Args: subject(basestring): Unique and public identifier displayName(base...

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def start(self, inputs): """Start the process. :param inputs: An instance of `Inputs` describing the process inputs :return: An instance of `Outputs` describing the process outputs """ self.logger.info("Process is starting") outputs = Outputs(self._meta.outputs) ...

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36.541667

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def set(self, key, value): """ Sets the value for a specific requirement. :param key: Name of requirement to be set :param value: Value to set for requirement key :return: Nothing, modifies requirement """ if key == "tags": self._set_tag(tags=value) ...

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37.5

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def in_interactions_iter(self, nbunch=None, t=None): """Return an iterator over the in interactions present in a given snapshot. Edges are returned as tuples in the order (node, neighbor). Parameters ---------- nbunch : iterable container, optional (default= all nodes) ...

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34.041667

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def revoke_qualification(self, subject_id, qualification_type_id, reason=None): """TODO: Document.""" params = {'SubjectId' : subject_id, 'QualificationTypeId' : qualification_type_id, 'Reason' : reason} return self._process_reques...

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def urls(self): """ The decoded URL list for this MIME::Type. The special URL value IANA will be translated into: http://www.iana.org/assignments/media-types/<mediatype>/<subtype> The special URL value RFC### will be translated into: http://www.rfc-editor.org/rfc/rfc#...

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39.675

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def trace(self, item): """Traces a parse element (only enabled in develop).""" if DEVELOP: item.debugActions = ( None, # no start action self._trace_success_action, self._trace_exc_action, ) item.debug = True re...

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32

0.006079

def delete_leaderboard_named(self, leaderboard_name): ''' Delete the named leaderboard. @param leaderboard_name [String] Name of the leaderboard. ''' pipeline = self.redis_connection.pipeline() pipeline.delete(leaderboard_name) pipeline.delete(self._member_data_k...

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38.909091

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def fill_luis_event_properties( self, recognizer_result: RecognizerResult, turn_context: TurnContext, telemetry_properties: Dict[str, str] = None, ) -> Dict[str, str]: """Fills the event properties for LuisResult event for telemetry. These properties are logged when t...

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def _segment_lengths(self, relative=False, n=20): """ Returns a list with the lengths of each segment in the path. """ # From nodebox_gl lengths = [] first = True for el in self._get_elements(): if first is True: close_x, close_y = el.x, el.y ...

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def path_to_url2(path): """ Convert a path to a file: URL. The path will be made absolute and have quoted path parts. """ path = os.path.normpath(os.path.abspath(path)) drive, path = os.path.splitdrive(path) filepath = path.split(os.path.sep) url = '/'.join([urllib.quote(part) for part ...

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33.833333

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def handle(self, *args, **kwargs): """ Handle execution of the command. """ cutoff = timezone.now() cutoff -= app_settings.CONFIRMATION_EXPIRATION cutoff -= app_settings.CONFIRMATION_SAVE_PERIOD queryset = models.EmailConfirmation.objects.filter( crea...

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def connect_value(instance, prop, widget, value_range=None, log=False): """ Connect a numerical callback property with a Qt widget representing a value. Parameters ---------- instance : object The class instance that the callback property is attached to prop : str The name of th...

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def noisy_moments(self, moments: 'Iterable[cirq.Moment]', system_qubits: Sequence['cirq.Qid'] ) -> Sequence['cirq.OP_TREE']: """Adds possibly stateful noise to a series of moments. Args: moments: The moments to add noise to. system_qubi...

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37.807692

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def pposition(hd, details=False): """Parse string into angular position. A string containing 2 or 6 numbers is parsed, and the numbers are converted into decimal numbers. In the former case the numbers are assumed to be floats. In the latter case, the numbers are assumed to be sexagesimal. Par...

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28.876289

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def _save_file_and_pos(self): """ Save current position into file """ if not self._pos_changed: return with open(self.pos_storage_filename, 'w+') as f: _pos = '%s:%s' % (self._log_file, self._log_pos) _logger.debug('Saving position %s to file %s' ...

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39.181818

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def _conditional_committors(source, sink, waypoint, tprob): """ Computes the conditional committors :math:`q^{ABC^+}` which are is the probability of starting in one state and visiting state B before A while also visiting state C at some point. Note that in the notation of Dickson et. al. this comp...

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32.575758

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def append(self, key, _item): # type: (Union[Key, str], Any) -> Table """ Appends a (key, item) to the table. """ if not isinstance(_item, Item): _item = item(_item) self._value.append(key, _item) if isinstance(key, Key): key = key.key ...

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def verify_psd_options_multi_ifo(opt, parser, ifos): """Parses the CLI options and verifies that they are consistent and reasonable. Parameters ---------- opt : object Result of parsing the CLI with OptionParser, or any object with the required attributes (psd_model, psd_file, asd_f...

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def stop(self): """ Stop all threads and modules of the client. :return: """ super(BitfinexWSS, self).stop() log.info("BitfinexWSS.stop(): Stopping client..") log.info("BitfinexWSS.stop(): Joining receiver thread..") try: self.receiver_thread...

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def indication(self, pdu): """Client requests are queued for delivery.""" if _debug: UDPDirector._debug("indication %r", pdu) # get the destination addr = pdu.pduDestination # get the peer peer = self.peers.get(addr, None) if not peer: peer = self.ac...

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def get_default_view_path(resource): "Returns the dotted path to the default view class." parts = [a.member_name for a in resource.ancestors] +\ [resource.collection_name or resource.member_name] if resource.prefix: parts.insert(-1, resource.prefix) view_file = '%s' % '_'.join(par...

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def from_filenames(filenames, transformations=None, primitive=True, extend_collection=False): """ Generates a TransformedStructureCollection from a cif, possibly containing multiple structures. Args: filenames: List of strings of the cif files ...

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def get_migrations_dir(graph): """ Resolve the migrations directory path. Either take the directory from a component of the object graph or by using the metaata's path resolution facilities. """ try: migrations_dir = graph.migrations_dir except (LockedGraphError, NotBoundError): ...

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def filter_permissions(self, search): """Filter given query based on permissions of the user in the request. :param search: ElasticSearch query object """ user = self.request.user if user.is_superuser: return search if user.is_anonymous: user = g...

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def get_mean_and_stddevs(self, sites, rup, dists, imt, stddev_types): """ See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` for spec of input and result values. """ # extracting dictionary of coefficients specific to required #...

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def create_packages(self): """Create missing packages joining the vendor root to the base of the vendored distribution. For example, given a root at ``/home/jake/dev/pantsbuild/pex`` and a vendored distribution at ``pex/vendor/_vendored/requests`` this method would create the following package files:: ...

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def fit(self, X, y, **args): """ The fit method is the primary entry point for the manual alpha selection visualizer. It sets the alpha param for each alpha in the alphas list on the wrapped estimator, then scores the model using the passed in X and y data set. Those scores are t...

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def flattenTrees(root, nodeSelector: Callable[[LNode], bool]): """ Walk all nodes and discover trees of nodes (usually operators) and reduce them to single node with multiple outputs :attention: selected nodes has to have single output and has to be connected to nets with single driver ...

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def write(self, path, prog=None, format='raw'): """Write graph to file in selected format. Given a filename 'path' it will open/create and truncate such file and write on it a representation of the graph defined by the dot object and in the format specified by 'format'. 'path' c...

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def group_items(items, groupids): r""" Groups a list of items by group id. Args: items (Iterable): a list of items to group groupids (Iterable or Callable): a corresponding list of item groupids or a function mapping an item to a groupid. Returns: dict: groupid_to_i...

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def multi_iter(iterable, count=2): """Return `count` independent, thread-safe iterators for `iterable`""" # no need to special-case re-usable, container-like iterables if not isinstance( iterable, ( list, tuple, set, FutureChainResults, ...

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def get_file_to_bytes(self, share_name, directory_name, file_name, start_range=None, end_range=None, range_get_content_md5=None, progress_callback=None, max_connections=1, max_retries=5, retry_wait=1.0, timeout=None): ''' Dow...

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def memcache_get(self, key, for_cas=False, namespace=None, use_cache=False, deadline=None): """An auto-batching wrapper for memcache.get() or .get_multi(). Args: key: Key to set. This must be a string; no prefix is applied. for_cas: If True, request and store CAS ids on the Cont...

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async def reinvoke(self, *, call_hooks=False, restart=True): """|coro| Calls the command again. This is similar to :meth:`~.Context.invoke` except that it bypasses checks, cooldowns, and error handlers. .. note:: If you want to bypass :exc:`.UserInputError` derive...

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def to_dataframe(self): """Export grid data to dataframes for statistical analysis. The export to dataframe is similar to db tables exported by `export_mv_grid_new`. Returns ------- :pandas:`pandas.DataFrame<dataframe>` Pandas Data Frame See Als...

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def killBatchJobs(self, jobIDs): """ Kills the given jobs, represented as Job ids, then checks they are dead by checking they are not in the list of issued jobs. """ self.killLocalJobs(jobIDs) jobIDs = set(jobIDs) logger.debug('Jobs to be killed: %r', jobIDs) ...

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def pls(df): """ A simple implementation of a least-squares approach to imputation using partial least squares regression (PLS). :param df: :return: """ if not sklearn: assert('This library depends on scikit-learn (sklearn) to perform PLS-based imputation') df = df.copy() ...

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def convert_to_tflayer_args(args_names, name_mapping): """ After applying this decorator: 1. data_format becomes tf.layers style 2. nl becomes activation 3. initializers are renamed 4. positional args are transformed to corresponding kwargs, according to args_names 5. kwargs are mapped to tf...

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def load_tabs(self): """Loads the tab group. It compiles the table instances for each table attached to any :class:`horizon.tabs.TableTab` instances on the tab group. This step is necessary before processing any tab or table actions. """ tab_group = self.get_tabs(self.re...

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def read_data(self, **kwargs): """ get the data from the service :param kwargs: contain keyword args : trigger_id at least :type kwargs: dict :rtype: list """ date_triggered = kwargs.get('date_triggered') trigger_id = kwargs.get('trigger_...

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def replace_namespaced_daemon_set_status(self, name, namespace, body, **kwargs): # noqa: E501 """replace_namespaced_daemon_set_status # noqa: E501 replace status of the specified DaemonSet # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous H...

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def stop(self): """Stop the daemon.""" pid = None if os.path.exists(self.pidfile): with open(self.pidfile, 'r') as fp: pid = int(fp.read().strip()) if not pid: msg = 'pidfile (%s) does not exist. Daemon not running?\n' sys.stderr.write...

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def getDefaultUncertainty(self, result=None): """Return the uncertainty value, if the result falls within specified ranges for the service from which this analysis was derived. """ if result is None: result = self.getResult() uncertainties = self.getUncertainties() ...

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def argrelmin(data, axis=0, order=1, mode='clip'): """ Calculate the relative minima of `data`. .. versionadded:: 0.11.0 Parameters ---------- data : ndarray Array in which to find the relative minima. axis : int, optional Axis over which to select from `data`. Default is ...

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def roc_curve(df, col_true=None, col_pred=None, col_scores=None, pos_label=1): r""" Compute true positive rate (TPR), false positive rate (FPR) and threshold from predicted DataFrame. Note that this method will trigger the defined flow to execute. :param df: predicted data frame :type df: DataFram...

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def _parse_notes_dict(sbase): """ Creates dictionary of COBRA notes. Parameters ---------- sbase : libsbml.SBase Returns ------- dict of notes """ notes = sbase.getNotesString() if notes and len(notes) > 0: pattern = r"<p>\s*(\w+\s*\w*)\s*:\s*([\w|\s]+)<" matche...

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def lostitem_delete_view(request, item_id): """Delete a lostitem. id: lostitem id """ if request.method == "POST": try: a = LostItem.objects.get(id=item_id) if request.POST.get("full_delete", False): a.delete() messages.success(request, "...

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def GetRDFValueType(self): """Returns this attribute's RDFValue class.""" result = self.attribute_type for field_name in self.field_names: # Support the new semantic protobufs. try: result = result.type_infos.get(field_name).type except AttributeError: raise AttributeError(...

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def stroke(self,*args): '''Set a stroke color, applying it to new paths.''' self._strokecolor = self.color(*args) return self._strokecolor

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def toBytes(x): ''' x-->unicode string | bytearray | bytes Returns-->bytes If x is unicode, MUST have encoding=latin1 ''' if isinstance(x, bytes): return x elif isinstance(x, bytearray): return bytes(x) elif isinstance(x, unicode): pass else: return x ...

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def file_sign( blockchain_id, hostname, input_path, passphrase=None, config_path=CONFIG_PATH, wallet_keys=None ): """ Sign a file with the current blockchain ID's host's public key. @config_path should be for the *client*, not blockstack-file Return {'status': True, 'sender_key_id': ..., 'sig': ...} on ...

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def parse_directive_locations(lexer: Lexer) -> List[NameNode]: """DirectiveLocations""" # optional leading pipe expect_optional_token(lexer, TokenKind.PIPE) locations: List[NameNode] = [] append = locations.append while True: append(parse_directive_location(lexer)) if not expect_...

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def localize_date(date, city): """ Localize date into city Date: datetime City: timezone city definitio. Example: 'Asia/Qatar', 'America/New York'.. """ local = pytz.timezone(city) local_dt = local.localize(date, is_dst=None) return local_dt

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def update(self, key, data): """Update document by key with partial data. Updates the document matching _id=<key> with 'data' Where 1st argument 'key' is <key> 'data' may contain dot notation fields in order to specify nested values in the documents, e.g. colle...

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def grad_log_likelihood(self, y, quiet=False): """ Compute the gradient of the marginalized likelihood The factorized matrix from the previous call to :func:`GP.compute` is used so ``compute`` must be called first. The gradient is taken with respect to the parameters returned by...

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def remove_edge(self, p_from, p_to, p_remove_unconnected_nodes=True): """ Removes an edge from the graph. When remove_unconnected_nodes is True, then the nodes are also removed if they become isolated. """ if self.has_edge(p_from, p_to): self._edges[p_from].r...

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async def delete(self, key): """ Fix me after support 204 code in aiohttp """ try: async with self._client.delete(self.path_keys(key)) as r: if r.status not in [204, 404]: return False return True except ContentEncodingError: ...

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def get_object(self, bucket_name, object_name, request_headers=None, sse=None): """ Retrieves an object from a bucket. This function returns an object that contains an open network connection to enable incremental consumption of the response. To re-use the connection (if desired...

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def oauth_login(self, provider, id_column, id, attrs, defaults, redirect_url=None): """Execute a login via oauth. If no user exists, oauth_signup() will be called """ user = self.query.filter(**dict([(id_column, id)])).first() if not redirect_url: redirect_url = request.args....

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def load(param): """ If the supplied parameter is a string, assum it's a simple pattern. """ return ( Pattern(param) if isinstance(param, str) else param if param is not None else Null() )

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def fail(state, msg="fail"): """Always fails the SCT, with an optional msg. This function takes a single argument, ``msg``, that is the feedback given to the student. Note that this would be a terrible idea for grading submissions, but may be useful while writing SCTs. For example, failing a test will ...

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def to_yaml(self): """Store an instance to the referenced YAML file.""" import yaml with self.__reference__.open('w') as fp: yaml.dump(self.asjsonld(), fp, default_flow_style=False)

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def strip_email_quotes(text): """Strip leading email quotation characters ('>'). Removes any combination of leading '>' interspersed with whitespace that appears *identically* in all lines of the input text. Parameters ---------- text : str Examples -------- Simple uses:: ...

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def fit_predict(self, y, exogenous=None, n_periods=10, **fit_args): """Fit an ARIMA to a vector, ``y``, of observations with an optional matrix of ``exogenous`` variables, and then generate predictions. Parameters ---------- y : array-like or iterable, shape=(n_samples,)...

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def get_wulff_shape(self, material_id): """ Constructs a Wulff shape for a material. Args: material_id (str): Materials Project material_id, e.g. 'mp-123'. Returns: pymatgen.analysis.wulff.WulffShape """ from pymatgen.symmetry.analyzer import Spac...

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def is_port_open(self, port, timeout=2): """ check if given port is open and receiving connections on container ip_address :param port: int, container port :param timeout: int, how many seconds to wait for connection; defaults to 2 :return: True if the connection has been establ...

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def compile(self): """ Compile this expression into an ODPS SQL :return: compiled DAG :rtype: str """ from ..engines import get_default_engine engine = get_default_engine(self) return engine.compile(self)

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def _prepare_tokens_for_encode(tokens): """Prepare tokens for encoding. Tokens followed by a single space have "_" appended and the single space token is dropped. If a token is _UNDERSCORE_REPLACEMENT, it is broken up into 2 tokens. Args: tokens: `list<str>`, tokens to prepare. Returns: `list<st...

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def set_sources(self, sources): """ Creates GeocodeServiceConfigs from each str source """ if len(sources) == 0: raise Exception('Must declare at least one source for a geocoder') self._sources = [] for source in sources: # iterate through a list of sources ...

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def pearson(x, y): """ Correlates row vector x with each row vector in 2D array y. """ data = np.vstack((x, y)) ms = data.mean(axis=1)[(slice(None, None, None), None)] datam = data - ms datass = np.sqrt(np.sum(datam**2, axis=1)) temp = np.dot(datam[1:], datam[0].T) rs = temp / (datass[1:] * ...

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def call(cls, iterable, *a, **kw): """ Calls every item in *iterable* with the specified arguments. """ return cls(x(*a, **kw) for x in iterable)

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def load(jwks): """Parse a JWKSet and return a dictionary that maps key IDs on keys.""" sign_keys = {} verify_keys = {} try: keyset = json.loads(jwks) for key in keyset['keys']: for op in key['key_ops']: if op == 'sign': k = sign_keys ...

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def submit(command_filename, workingdir, send_mail = False, username = None): '''Submit the given command filename to the queue. Adapted from the qb3 example.''' return sge_interface.submit(command_filename, workingdir, send_mail = send_mail, username = username)

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def devmodel_to_array(model_name, train_fraction=1): """ a standardized method of turning a dev_model object into training and testing arrays Parameters ---------- model_name: dev_model the dev_model object to be interrogated train_fraction: int the fraction to be reserved f...

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def remove(self, pk): """Remove an item from the cart. Parameters ---------- pk : str or int The primary key of the item. Raises ------ ItemNotInCart """ pk = str(pk) try: del self.items[pk] except KeyErro...

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def _extract_traceback(text): """Receive a list of strings representing the input from stdin and return the restructured backtrace. This iterates over the output and once it identifies a hopefully genuine identifier, it will start parsing output. In the case the input includes a reraise (a Python 3...

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def _find_variable(self, pattern, logline): """ Return the variable parts of the code given a tuple of strings pattern. Example: (this, is, a, pattern) -> 'this is a good pattern' -> [good] """ var_subs = [] # find the beginning of the pattern first_index = logli...

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def makefig(code, code_path, output_dir, output_base, config): """ Run a pyplot script *code* and save the images under *output_dir* with file names derived from *output_base* """ # -- Parse format list default_dpi = {'png': 80, 'hires.png': 200, 'pdf': 50} formats = [] for fmt in conf...

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def get_device(_id): """ Pull a device from the API. """ url = DEVICE_URL % _id arequest = requests.get(url, headers=HEADERS) status_code = str(arequest.status_code) if status_code == '401': _LOGGER.error("Token expired.") return False ...

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def pop_events(self): ''' Pop all events and return a `collections.deque` object. The returned container can be empty. This method is preferred over `pop_event()` as it is much faster as the lock has to be acquired only once and also avoids running into an infinite loop during event processing. ...

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def ver(self, revision): """Clone and change the version.""" c = self.clone() c.version = self._parse_version(self.version) return c

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def sign_execute_deposit(deposit_params, key_pair): """ Function to execute the deposit request by signing the transaction generated by the create deposit function. Execution of this function is as follows:: sign_execute_deposit(deposit_details=create_deposit, key_pair=key_pair) The expected r...

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def _to_narrow(self, terms, data, mask, dates, assets): """ Convert raw computed pipeline results into a DataFrame for public APIs. Parameters ---------- terms : dict[str -> Term] Dict mapping column names to terms. data : dict[str -> ndarray[ndim=2]] ...

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def get_config(self, section=None): """ Return the merged end-user configuration for this command or a specific section if set in `section`. """ config = self.session.config section = self.config_section() if section is None else section try: return config[section] ...

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def from_file(cls, filename): """ Reads configuration from given path to a file in local file system and returns parsed version of it. :param filename: Path to the YAML file in local file system where the configuration will be read from. :type filename: ...

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def flight_modes(logfile): '''show flight modes for a log file''' print("Processing log %s" % filename) mlog = mavutil.mavlink_connection(filename) mode = "" previous_mode = "" mode_start_timestamp = -1 time_in_mode = {} previous_percent = -1 seconds_per_percent = -1 filesize =...

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def word_count(text, html=True): """ Return the count of words in the given text. If the text is HTML (default True), tags are stripped before counting. Handles punctuation and bad formatting like.this when counting words, but assumes conventions for Latin script languages. May not be reliable for o...

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