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def json_serial(obj): """ Custom JSON serializer for objects not serializable by default. """ if isinstance(obj, (datetime.datetime, datetime.date)): return obj.isoformat() raise TypeError('Type {} not serializable.'.format(type(obj)))
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def build_module( name, source=None, *, sources=None, preprocess=None, output=None, output_dir='.', build_dir='build', include_dirs=None, library_dirs=None, libraries=None, macros=None, compiler_preargs=None, compiler_postargs=None, linker_preargs=None, linker_postargs=None, cache=True): ''...
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def _get_prog_memory(resources, cores_per_job): """Get expected memory usage, in Gb per core, for a program from resource specification. """ out = None for jvm_opt in resources.get("jvm_opts", []): if jvm_opt.startswith("-Xmx"): out = _str_memory_to_gb(jvm_opt[4:]) memory = resou...
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def add_marker(self, marker): """ Adds the marker to the panel. :param marker: Marker to add :type marker: pyqode.core.modes.Marker """ self._markers.append(marker) doc = self.editor.document() assert isinstance(doc, QtGui.QTextDocument) block = d...
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def is_all_field_none(self): """ :rtype: bool """ if self._target_url is not None: return False if self._category is not None: return False if self._event_type is not None: return False if self._object_ is not None: ...
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def newton_refine2(s_vals, curve1, curve2): """Image for :func:`.newton_refine` docstring.""" if NO_IMAGES: return ax = curve1.plot(256) ax.lines[-1].zorder = 1 curve2.plot(256, ax=ax) ax.lines[-1].zorder = 1 points = curve1.evaluate_multi(np.asfortranarray(s_vals)) colors = sea...
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def find_usage(self): """ Determine the current usage for each limit of this service, and update corresponding Limit via :py:meth:`~.AwsLimit._add_current_usage`. """ logger.debug("Checking usage for service %s", self.service_name) self.connect() for lim i...
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def namify(root_uri): '''Turns a root uri into a less noisy representation that will probably make sense in most circumstances. Used by Navigator's __repr__, but can be overridden if the Navigator is created with a 'name' parameter.''' root_uri = unidecode.unidecode(decode(unquote(root_uri), 'utf-8')) ...
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def config_ref_role(name, rawtext, text, lineno, inliner, options=None, content=None): """Process a role that references the target nodes created by the ``lsst-config-topic`` directive. Parameters ---------- name The role name used in the document. rawtext Th...
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def set_servo_angle(self, goalangle, goaltime, led): """ Sets the servo angle (in degrees) Enable torque using torque_on function before calling this Args: goalangle (int): The desired angle in degrees, range -150 to 150 goaltime (int): the time taken to move from prese...
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def _prepare_polib_files(files_dict, filename, languages, locale_root, po_files_path, header): """ Prepare polib file object for writing/reading from them. Create directories and write header if needed. For each language, ensure there's a translation file named "filename" in the...
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def process_mgi_note_allele_view(self, limit=None): """ These are the descriptive notes about the alleles. Note that these notes have embedded HTML - should we do anything about that? :param limit: :return: """ line_counter = 0 if self.test_mode:...
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def get_i_text(node): """ Get the text for an Indicator node. :param node: Indicator node. :return: """ if node.tag != 'Indicator': raise IOCParseError('Invalid tag: {}'.format(node.tag)) s = node.get('operator').upper() return s
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def _set_available_combinations(self): """ Generate all connected outputs combinations and set the max display width while iterating. """ available = set() combinations_map = {} whitelist = None if self.output_combinations: whitelist = self.ou...
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def processHierarchical(self): """Main process for hierarchical segmentation. Returns ------- est_idxs : list List containing estimated times for each layer in the hierarchy as np.arrays est_labels : list List containing estimated labels for ea...
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def get_full_returns(self, jid, minions, timeout=None): ''' This method starts off a watcher looking at the return data for a specified jid, it returns all of the information for the jid ''' # TODO: change this from ret to return... or the other way. # Its inconsist...
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def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'feedback_id') and self.feedback_id is not None: _dict['feedback_id'] = self.feedback_id if hasattr(self, 'user_id') and self.user_id is not None: _dict['user_i...
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def closeGlyphsOverGSUB(gsub, glyphs): """ Use the FontTools subsetter to perform a closure over the GSUB table given the initial `glyphs` (set of glyph names, str). Update the set in-place adding all the glyph names that can be reached via GSUB substitutions from this initial set. """ subsetter...
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def validate(self): """ validate the RevocationReason object """ if not isinstance(self.revocation_code, RevocationReasonCode): msg = "RevocationReaonCode expected" raise TypeError(msg) if self.revocation_message is not None: if not isinstance(...
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def new_deploy(py_ver: PyVer, release_target: ReleaseTarget): """Job for deploying package to pypi""" cache_file = f'app_{py_ver.name}.tar' template = yaml.safe_load(f""" machine: image: circleci/classic:201710-02 steps: - attach_workspace: at: {cache_dir} - checkout ...
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def find_asts(self, ast_root, name): ''' Finds an AST node with the given name and the entire subtree under it. A function borrowed from scottfrazer. Thank you Scott Frazer! :param ast_root: The WDL AST. The whole thing generally, but really any portion that y...
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def _cf_dictionary_from_tuples(tuples): """ Given a list of Python tuples, create an associated CFDictionary. """ dictionary_size = len(tuples) # We need to get the dictionary keys and values out in the same order. keys = (t[0] for t in tuples) values = (t[1] for t in tuples) cf_keys = ...
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def blast_seqs(seqs, blast_constructor, blast_db=None, blast_mat_root=None, params={}, add_seq_names=True, out_filename=None, WorkingDir=None, SuppressStderr=None, Sup...
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def check_courses(self, kcdms): """ 检查课程是否被选 @structure [bool] :param kcdms: 课程代码列表 :return: 与课程代码列表长度一致的布尔值列表, 已为True,未选为False """ selected_courses = self.get_selected_courses() selected_kcdms = {course['课程代码'] for course in selected_courses} re...
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def _resolve_hostname(name): """Returns resolved hostname using the ssh config""" if env.ssh_config is None: return name elif not os.path.exists(os.path.join("nodes", name + ".json")): resolved_name = env.ssh_config.lookup(name)['hostname'] if os.path.exists(os.path.join("nodes", res...
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def check_match(self, name): """ Check if a release version matches any of the specificed patterns. Parameters ========== name: str Release name Returns ======= bool: True if it matches, False otherwise. """ return...
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def delta(f, s, d=None): """ Create a delta for the file `f` using the signature read from `s`. The delta will be written to `d`. If `d` is omitted, a temporary file will be used. This function returns the delta file `d`. All parameters must be file-like objects. """ if d is None: d ...
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def create_dag_run(self, dag, session=None): """ This method checks whether a new DagRun needs to be created for a DAG based on scheduling interval. Returns DagRun if one is scheduled. Otherwise returns None. """ if dag.schedule_interval and conf.getboolean('scheduler', '...
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def set_default(self, section, option, default_value): """ Set Default value for a given (section, option) -> called when a new (section, option) is set and no default exists """ section = self._check_section_option(section, option) for sec, options in self.defaults...
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def _load_reports(self, report_files): """ Args: report_files: list[file] reports to read in """ contents = [] for file_handle in report_files: # Convert to unicode, replacing unreadable chars contents.append( file_handle.read()...
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def encrypt_dir(self, path, output_path=None, overwrite=False, stream=True, enable_verbose=True): """ Encrypt everything in a directory. :param path: path of the dir you need to encrypt :...
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def execute_message_call( laser_evm, callee_address, caller_address, origin_address, code, data, gas_limit, gas_price, value, track_gas=False, ) -> Union[None, List[GlobalState]]: """Execute a message call transaction from all open states. :param laser_evm: :param ca...
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def imported_member(self, node, member, name): """verify this is not an imported class or handle it""" # /!\ some classes like ExtensionClass doesn't have a __module__ # attribute ! Also, this may trigger an exception on badly built module # (see http://www.logilab.org/ticket/57299 for i...
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def great_circle_Npoints(lonlat1r, lonlat2r, N): """ N points along the line joining lonlat1 and lonlat2 """ ratio = np.linspace(0.0,1.0, N).reshape(-1,1) xyz1 = lonlat2xyz(lonlat1r[0], lonlat1r[1]) xyz2 = lonlat2xyz(lonlat2r[0], lonlat2r[1]) mids = ratio * xyz2 + (1.0-ratio) * xyz1 ...
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def handle_existing_user(self, provider, user, access, info): "Login user and redirect." login(self.request, user) return redirect(self.get_login_redirect(provider, user, access))
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def format_items(x): """Returns a succinct summaries of all items in a sequence as strings""" x = np.asarray(x) timedelta_format = 'datetime' if np.issubdtype(x.dtype, np.timedelta64): x = np.asarray(x, dtype='timedelta64[ns]') day_part = (x[~pd.isnull(x)] .astype('ti...
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def set_global_tracer(value): """Sets the global tracer. It is an error to pass ``None``. :param value: the :class:`Tracer` used as global instance. :type value: :class:`Tracer` """ if value is None: raise ValueError('The global Tracer tracer cannot be None') global tracer, is_trac...
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def init(*args, **kwargs): """Initializes the SDK and optionally integrations. This takes the same arguments as the client constructor. """ global _initial_client client = Client(*args, **kwargs) Hub.current.bind_client(client) rv = _InitGuard(client) if client is not None: _ini...
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def compute(self, base, *args, **kwargs): ''' Returns the value of the discount. @param base:float Computation base. @return: Decimal ''' return min(base, super(Discount, self).compute(base, *args, **kwargs))
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def get_available_positions(self): """Return a list of empty slot numbers """ available_positions = ["new"] layout = self.context.getLayout() used_positions = [int(slot["position"]) for slot in layout] if used_positions: used = [ pos for pos in...
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def get_url(width, height, color=True): """ Craft the URL for a placekitten image. By default they are in color. To retrieve a grayscale image, set the color kwarg to False. """ d = dict(width=width, height=height) return URL % d
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def iteritems(self): ''' Yields a sequence of (PyObjectPtr key, PyObjectPtr value) pairs, analagous to dict.iteritems() ''' for i in safe_range(self.field('ma_mask') + 1): ep = self.field('ma_table') + i pyop_value = PyObjectPtr.from_pyobject_ptr(ep['me_va...
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def safe_tag(self, tag, errors='strict'): """URL Encode and truncate tag to match limit (128 characters) of ThreatConnect API. Args: tag (string): The tag to be truncated Returns: (string): The truncated tag """ if tag is not None: try: ...
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def get_attribute(self, attribute: str) -> 'Node': """Returns the node representing the given attribute's value. Use only if is_mapping() returns true. Args: attribute: The name of the attribute to retrieve. Raises: KeyError: If the attribute does not exist. ...
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def boxes_intersect(box1, box2): """Determines if two rectangles, each input as a tuple (xmin, xmax, ymin, ymax), intersect.""" xmin1, xmax1, ymin1, ymax1 = box1 xmin2, xmax2, ymin2, ymax2 = box2 if interval_intersection_width(xmin1, xmax1, xmin2, xmax2) and \ interval_intersection_w...
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def com_google_fonts_check_linegaps(ttFont): """Checking Vertical Metric Linegaps.""" if ttFont["hhea"].lineGap != 0: yield WARN, Message("hhea", "hhea lineGap is not equal to 0.") elif ttFont["OS/2"].sTypoLineGap != 0: yield WARN, Message("OS/2", "OS/2 sTypoLineGap is not equal to 0.") else: yield ...
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def def_coordinator(self, year): """Returns the coach ID for the team's DC in a given year. :year: An int representing the year. :returns: A string containing the coach ID of the DC. """ try: dc_anchor = self._year_info_pq(year, 'Defensive Coordinator')('a') ...
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def get_argparser(parser=None): """Customize a parser to get the correct options.""" parser = parser or argparse.ArgumentParser() parser.add_argument("--host", default="0.0.0.0", help="Host listen address") parser.add_argument("--port", "-p", default=9050, help="Listen port", type=int) ...
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def str_to_datetime(ts): """Format a string to a datetime object. This functions supports several date formats like YYYY-MM-DD, MM-DD-YYYY and YY-MM-DD. When the given data is None or an empty string, the function returns None. :param ts: string to convert :returns: a datetime object :ra...
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def get_node_label(self, model): """ Defines how labels are constructed from models. Default - uses verbose name, lines breaks where sensible """ if model.is_proxy: label = "(P) %s" % (model.name.title()) else: label = "%s" % (model.name.title()) ...
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def do_load(self, arg): """Loads a saved session variables, settings and test results to the shell.""" from os import path import json fullpath = path.expanduser(arg) if path.isfile(fullpath): with open(fullpath) as f: data = json.load(f) ...
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def requests(): """List all pending memberships, listed only for group admins.""" page = request.args.get('page', 1, type=int) per_page = request.args.get('per_page', 5, type=int) memberships = Membership.query_requests(current_user, eager=True).all() return render_template( 'invenio_groups...
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def start(self): """ Start the SSH tunnels """ if self.is_alive: self.logger.warning('Already started!') return self._create_tunnels() if not self.is_active: self._raise(BaseSSHTunnelForwarderError, reason='Could not establish s...
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def upload(self, filename, directory=None): """ Upload a file ``filename`` to ``directory`` :param str filename: path to the file to upload :param directory: destionation :class:`.Directory`, defaults to :attribute:`.API.downloads_directory` if None :return: the uplo...
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def read_file(filename: PathLike = "experiment.yml") -> Dict[str, Any]: """Read and parse yaml file.""" logger.debug("Input file: %s", filename) with open(filename, "r") as stream: structure = yaml.safe_load(stream) return structure
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def display_user(value, arg): ''' Return 'You' if value is equal to arg. Parameters: value should be a userprofile arg should be another user. Ideally, value should be a userprofile from an object and arg the user logged in. ''' if value.user == arg and arg.username !...
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def load_and_parse(self, package_name, root_dir, relative_dirs, resource_type, tags=None): """Load and parse models in a list of directories. Returns a dict that maps unique ids onto ParsedNodes""" extension = "[!.#~]*.sql" if tags is None: tags = ...
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def plotnoise(noisepkl, mergepkl, plot_width=950, plot_height=400): """ Make two panel plot to summary noise analysis with estimated flux scale """ d = pickle.load(open(mergepkl)) ndist, imstd, flagfrac = plotnoisedist(noisepkl, plot_width=plot_width/2, plot_height=plot_height) fluxscale = calcfluxscal...
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def start(name, call=None): ''' Start a VM. .. versionadded:: 2016.3.0 name The name of the VM to start. CLI Example: .. code-block:: bash salt-cloud -a start my-vm ''' if call != 'action': raise SaltCloudSystemExit( 'The start action must be call...
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def find_module(name, path=None): """imp.find_module variant that only return path of module. The `imp.find_module` returns a filehandle that we are not interested in. Also we ignore any bytecode files that `imp.find_module` finds. Parameters ---------- name : str name of module to...
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def str_lstrip(x, to_strip=None): """Remove leading characters from a string sample. :param str to_strip: The string to be removed :returns: an expression containing the modified string column. Example: >>> import vaex >>> text = ['Something', 'very pretty', 'is coming', 'our', 'way.'] >>...
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def add_ret_hash_memo(self, memo_return): """Set the memo for the transaction to a new :class:`RetHashMemo <stellar_base.memo.RetHashMemo>`. :param bytes memo_return: A 32 byte hash or hex encoded string intended to be interpreted as the hash of the transaction the sender is refundi...
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def pad(img, padding, fill=0, padding_mode='constant'): r"""Pad the given PIL Image on all sides with specified padding mode and fill value. Args: img (PIL Image): Image to be padded. padding (int or tuple): Padding on each border. If a single int is provided this is used to pad all...
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def do_bestfit(self): """ Do bestfit """ self.check_important_variables() x = np.array(self.args["x"]) y = np.array(self.args["y"]) p = self.args.get("params", np.ones(self.args["num_vars"])) self.fit_args, self.cov = opt.curve_fit(self.args["func"], x, y,...
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def transform(self, mode=None): ''' Set the current transform mode. :param mode: CENTER or CORNER''' if mode: self._canvas.mode = mode return self._canvas.mode
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def update_issue_link_type(self, issue_link_type_id, data): """ Update the specified issue link type. :param issue_link_type_id: :param data: { "name": "Duplicate", "inward": "Duplicated by", "outward": "Duplicat...
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def ccnot_circuit(qubits: Qubits) -> Circuit: """Standard decomposition of CCNOT (Toffoli) gate into six CNOT gates (Plus Hadamard and T gates.) [Nielsen2000]_ .. [Nielsen2000] M. A. Nielsen and I. L. Chuang, Quantum Computation and Quantum Information, Cambridge University Press (2000). ...
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def isargument(self, node): """ checks whether node aliases to a parameter.""" try: node_id, _ = self.node_to_id(node) return (node_id in self.name_to_nodes and any([isinstance(n, ast.Name) and isinstance(n.ctx, ast.Param) ...
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def insert_entity(self, entity): ''' Adds an insert entity operation to the batch. See :func:`~azure.storage.table.tableservice.TableService.insert_entity` for more information on inserts. The operation will not be executed until the batch is committed. :param...
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def run_job(job_ini, log_level='info', log_file=None, exports='', username=getpass.getuser(), **kw): """ Run a job using the specified config file and other options. :param str job_ini: Path to calculation config (INI-style) files. :param str log_level: 'debug', 'info', 'war...
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def _run_expiration(self, conn): """Return any items that have expired.""" # The logic here is sufficiently complicated, and we need # enough random keys (Redis documentation strongly encourages # not constructing key names in scripts) that we'll need to # do this in multiple ste...
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def get_callable_method_dict(obj): """Returns a dictionary of callable methods of object `obj`. @param obj: ZOS API Python COM object @return: a dictionary of callable methods Notes: the function only returns the callable attributes that are listed by dir() function. Properties are not r...
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async def confirmbalance(self, *args, **kwargs): """ Confirm balance after trading Accepts: - message (signed dictionary): - "txid" - str - "coinid" - str - "amount" - int Returns: - "address" - str - "coinid" - str - "amount" - int - "...
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def remap_label_indexers(data_obj, indexers, method=None, tolerance=None): """Given an xarray data object and label based indexers, return a mapping of equivalent location based indexers. Also return a mapping of updated pandas index objects (in case of multi-index level drop). """ if method is not ...
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def produceResource(self, request, segments, webViewer): """ Produce a resource that traverses site-wide content, passing down the given webViewer. This delegates to the site store's L{IMantissaSite} adapter, to avoid a conflict with the L{ISiteRootPlugin} interface. Th...
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def gifs_translate_get(self, api_key, s, **kwargs): """ Translate Endpoint The translate API draws on search, but uses the Giphy `special sauce` to handle translating from one vocabulary to another. In this case, words and phrases to GIFs. This method makes a synchronous HTTP request by ...
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def add_group_entity(self, persons_plural, persons_ids, entity, instances_json): """ Add all instances of one of the model's entities as described in ``instances_json``. """ check_type(instances_json, dict, [entity.plural]) entity_ids = list(map(str, instances_json.keys())) ...
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def clean(deltox=False): '''Delete temporary files not under version control. Args: deltox: If True, delete virtual environments used by tox ''' basedir = dirname(__file__) print(cyan('delete temp files and dirs for packaging')) local(flo( 'rm -rf ' '{basedir}/.eggs/ ...
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def get_variables(self, *args, **kwargs): """Provide a warning that get_variables on Sequential always returns ().""" tf.logging.warning( "Calling Sequential.get_variables, which will always return an empty " "tuple. get_variables() can only return variables created directly by " "a Modu...
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def update_utxoset(self, transaction): """Update the UTXO set given ``transaction``. That is, remove the outputs that the given ``transaction`` spends, and add the outputs that the given ``transaction`` creates. Args: transaction (:obj:`~bigchaindb.models.Transaction`): A ne...
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def _get_rabbitmq_plugin(): ''' Returns the rabbitmq-plugin command path if we're running an OS that doesn't put it in the standard /usr/bin or /usr/local/bin This works by taking the rabbitmq-server version and looking for where it seems to be hidden in /usr/lib. ''' global RABBITMQ_PLUGINS...
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def get_version_by_value(context, value): """ Get the latest version that matches the provided ami-id Args: context: a populated EFVersionContext object value: the value of the version to look for """ versions = get_versions(context) for version in versions: if version.value == value: retu...
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def show_report(self): """Show report.""" self.action_show_report.setEnabled(False) self.action_show_log.setEnabled(True) self.load_html_file(self.report_path)
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def get_info(self, account, params={}): """ Gets account info. @param account: account to get info for @param params: parameters to retrieve @return: AccountInfo """ res = self.invoke(zconstant.NS_ZIMBRA_ADMIN_URL, sconstant.GetInfoReques...
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def store_json(self, filename, dict_to_store): """Store json files.""" filename = os.path.join( self.data_dir, filename + '.data' ) fileops.dump_dict_to_file( dict_to_store, filename )
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def numberOfConnectedProximalSynapses(self, cells=None): """ Returns the number of proximal connected synapses on these cells. Parameters: ---------------------------- @param cells (iterable) Indices of the cells. If None return count for all cells. """ if cells is None: ...
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def build_api(packages, input, output, sanitizer, excluded_modules=None): """ Builds the Sphinx documentation API. :param packages: Packages to include in the API. :type packages: list :param input: Input modules directory. :type input: unicode :param output: Output reStructuredText files d...
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def _reduce(self, op, name, axis=0, skipna=True, numeric_only=None, filter_type=None, **kwds): """ perform a reduction operation """ return op(self.get_values(), skipna=skipna, **kwds)
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def refresh(self): """ refreshes a service """ params = {"f": "json"} uURL = self._url + "/refresh" res = self._get(url=uURL, param_dict=params, securityHandler=self._securityHandler, proxy_port=self._proxy_port, ...
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def _parse_pool_options(options): """Parse connection pool options.""" max_pool_size = options.get('maxpoolsize', common.MAX_POOL_SIZE) min_pool_size = options.get('minpoolsize', common.MIN_POOL_SIZE) max_idle_time_ms = options.get('maxidletimems', common.MAX_IDLE_TIME_MS) if max_pool_size is not No...
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def plot_target(target, ax): """Ajoute la target au plot""" ax.scatter(target[0], target[1], target[2], c="red", s=80)
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def _install_hiero(use_threaded_wrapper): """Helper function to The Foundry Hiero support""" import hiero import nuke if "--hiero" not in nuke.rawArgs: raise ImportError def threaded_wrapper(func, *args, **kwargs): return hiero.core.executeInMainThreadWithResult( func, ...
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def t_QUOTED_STRING(self, t): r'\"[^\"]*\"' t.lexer.lineno += len(re.findall(r'\r\n|\n|\r', t.value)) return t
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def constraint_matches(self, c, m): """ Return dict noting the substitution values (or False for no match) """ if isinstance(m, tuple): d = {} if isinstance(c, Operator) and c._op_name == m[0]: for c1, m1 in zip(c._args, m[1:]): ...
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def register(self, path, help_text=None, help_context=None): """ Registers email template. Example usage: email_templates.register('hello_template.html', help_text=u'Hello template', help_context={'username': u'Name of user in hello expression'}) :param path...
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def santalucia98_corrections(seq, pars_error): '''Sum corrections for SantaLucia '98 method (unified parameters). :param seq: sequence for which to calculate corrections. :type seq: str :param pars_error: dictionary of error corrections :type pars_error: dict :returns: Corrected delta_H and del...
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def merge(self, resolvable, packages, parent=None): """Add a resolvable and its resolved packages.""" self.__tuples.append(_ResolvedPackages(resolvable, OrderedSet(packages), parent, resolvable.is_constraint)) self._check()
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def condensedDistance(dupes): ''' Convert the pairwise list of distances in dupes to "condensed distance matrix" required by the hierarchical clustering algorithms. Also return a dictionary that maps the distance matrix to the record_ids. The formula for an index of the condensed matrix is ...
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def _print_task_data(self, task): """Pretty-prints task data. Args: task: Task dict generated by Turbinia. """ print(' {0:s} ({1:s})'.format(task['name'], task['id'])) paths = task.get('saved_paths', []) if not paths: return for path in paths: if path.endswith('worker-log....
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def get_free_sphere_params(structure, rad_dict=None, probe_rad=0.1): """ Analyze the void space in the input structure using voronoi decomposition Calls Zeo++ for Voronoi decomposition. Args: structure: pymatgen.core.structure.Structure rad_dict (optional): Dictionary of radii of elemen...
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