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def validate_gate(): """Check Gate connection.""" try: credentials = get_env_credential() LOG.debug('Found credentials: %s', credentials) LOG.info('Gate working.') except TypeError: LOG.fatal('Gate connection not valid: API_URL = %s', API_URL)
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def execFontDialog(self): """ Opens a QColorDialog for the user """ currentFont = self.getData() newFont, ok = QtGui.QFontDialog.getFont(currentFont, self) if ok: self.setData(newFont) else: self.setData(currentFont) self.commitAndClose()
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def plotXYCatalog(self, **kwargs): """ Plots the source catalog positions using matplotlib's `pyplot.plot()` Plotting `kwargs` that can also be passed include any keywords understood by matplotlib's `pyplot.plot()` function such as:: vmin, vmax, cmap, marker """ ...
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def do_rebootInstance(self,args): """Restart specified instance""" parser = CommandArgumentParser("rebootInstance") parser.add_argument(dest='instance',help='instance index or name'); args = vars(parser.parse_args(args)) instanceId = args['instance'] try: ind...
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def draw_samples(self, sequences, n_samples, random_state=None): """Sample conformations for a sequences of states. Parameters ---------- sequences : list or list of lists A sequence or list of sequences, in which each element corresponds to a state label. ...
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def partitionBy(self, *cols): """Partitions the output by the given columns on the file system. If specified, the output is laid out on the file system similar to Hive's partitioning scheme. :param cols: name of columns >>> df.write.partitionBy('year', 'month').parquet(os.path...
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def register(linter): """Required method to auto register this checker. :param linter: Main interface object for Pylint plugins :type linter: Pylint object """ warnings.warn( "This plugin is deprecated, use pylint.extensions.docparams instead.", DeprecationWarning, ) linter....
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def process_child(node): """This function changes class references to not have the intermediate module name by hacking at the doctree""" # Edit descriptions to be nicer if isinstance(node, sphinx.addnodes.desc_addname): if len(node.children) == 1: child = node.children[0] ...
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def main(graph: BELGraph, xlsx: str, tsvs: str): """Export the graph to a SPIA Excel sheet.""" if not xlsx and not tsvs: click.secho('Specify at least one option --xlsx or --tsvs', fg='red') sys.exit(1) spia_matrices = bel_to_spia_matrices(graph) if xlsx: spia_matrices_to_excel...
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def salt_refs(data, ret=None): ''' Pull salt file references out of the states ''' proto = 'salt://' if ret is None: ret = [] if isinstance(data, six.string_types): if data.startswith(proto) and data not in ret: ret.append(data) if isinstance(data, list): ...
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def setstrs(self, label, unit, format): """Set the dimension standard string attributes. Args:: label dimension label (attribute 'long_name') unit dimension unit (attribute 'units') format dimension format (attribute 'format') Returns:: None ...
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def subscriptions(self): """Fetch and return Subscriptions associated with this user.""" if not hasattr(self, '_subscriptions'): subscriptions_resource = self.resource.subscriptions self._subscriptions = Subscriptions( subscriptions_resource, self.client) ...
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def create_zipfile(context): """This is the actual zest.releaser entry point Relevant items in the context dict: name Name of the project being released tagdir Directory where the tag checkout is placed (*if* a tag checkout has been made) version Version we're rel...
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def normalize_nfc(txt): """ Normalize message to NFC and return bytes suitable for protobuf. This seems to be bitcoin-qt standard of doing things. """ if isinstance(txt, bytes): txt = txt.decode() return unicodedata.normalize("NFC", txt).encode()
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def denormalize_volume(volume): '''convert volume metadata from archivant to es format''' id = volume.get('id', None) res = dict() res.update(volume['metadata']) denorm_attachments = list() for a in volume['attachments']: denorm_attachments.append(Archivant.de...
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def complete( text: str, kw_cache: atom.Atom["PMap[int, Keyword]"] = __INTERN ) -> Iterable[str]: """Return an iterable of possible completions for the given text.""" assert text.startswith(":") interns = kw_cache.deref() text = text[1:] if "/" in text: prefix, suffix = text.split("/", ...
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def send_element(self, element): """ Send an element via the transport. """ with self.lock: if self._eof or self._socket is None or not self._serializer: logger.debug("Dropping element: {0}".format( element_to_un...
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def update_aliases(aliases,aonly,x): "helper for ctor. takes AliasX or string as second arg" if isinstance(x,basestring): aliases[x]=x elif isinstance(x,sqparse2.AliasX): if not isinstance(x.alias,basestring): raise TypeError('alias not string',type(x.alias)) if isinstance(x.name,sqparse2.NameX)...
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def merge_truthy(*dicts): """Merge multiple dictionaries, keeping the truthy values in case of key collisions. Accepts any number of dictionaries, or any other object that returns a 2-tuple of key and value pairs when its `.items()` method is called. If a key exists in multiple dictionaries passed to ...
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def createBracketOrder(self, contract, quantity, entry=0., target=0., stop=0., targetType=None, trailingStop=None, group=None, tif="DAY", fillorkill=False, iceberg=False, rth=False, stop_limit=False, transmit=True, account=None, **kwargs): """ creates One...
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def wrap_node(self, node, options): '''\ celery registers tasks by decorating them, and so do we, so the user can pass a celery task and we'll wrap our code with theirs in a nice package celery can execute. ''' if 'celery_task' in options: return options['cele...
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def out_of_bag_mae(self): """ Returns the mean absolute error for predictions on the out-of-bag samples. """ if not self._out_of_bag_mae_clean: try: self._out_of_bag_mae = self.test(self.out_of_bag_samples) self._out_of_bag_mae_clean = ...
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def upload(self, name: str) -> bool: """ Attempts to upload a given Docker image from this server to DockerHub. Parameters: name: the name of the Docker image. Returns: `True` if successfully uploaded, otherwise `False`. """ try: out ...
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def serialize(self, as_private=None): """ Yield a 74-byte binary blob corresponding to this node. You must add a 4-byte prefix before converting to base58. """ if as_private is None: as_private = self.secret_exponent() is not None if self.secret_exponent() is ...
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def set_eol_chars(self, text): """Set widget end-of-line (EOL) characters from text (analyzes text)""" if not is_text_string(text): # testing for QString (PyQt API#1) text = to_text_string(text) eol_chars = sourcecode.get_eol_chars(text) is_document_modified = eol_chars ...
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def curry(f, *args0, **kwargs0): ''' curry(f, ...) yields a function equivalent to f with all following arguments and keyword arguments passed. This is much like the partial function, but yields a function instead of a partial object and thus is suitable for use with pimms lazy maps. ''' def...
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def _GetEventData( self, parser_mediator, record_index, evt_record, recovered=False): """Retrieves event data from the Windows EventLog (EVT) record. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. record...
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def write(source_mapping, output_stream=sys.stdout): """This method writes a Python module respresenting all the keys and values known to configman. """ # a set of classes, modules and/or functions that are values in # configman options. These values will have to be imported in ...
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def avl_split(root, node): """ O(log(n)) Args: root (Node): tree root node (Node): node to split at Returns: puple: (tl, tr, node) tl contains all keys in the tree less than node tr contains all keys in the tree greater than node node is the ...
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def AddFiles(self, hash_id_metadatas): """Adds multiple files to the file store. Args: hash_id_metadatas: A dictionary mapping hash ids to file metadata (a tuple of hash client path and blob references). """ for hash_id, metadata in iteritems(hash_id_metadatas): self.AddFile(hash_id...
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def colourblind(i): ''' colour pallete from http://tableaufriction.blogspot.ro/ allegedly suitable for colour-blind folk SJ ''' rawRGBs = [(162,200,236), (255,128,14), (171,171,171), (95,158,209), (89,89,89), ...
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def get_notificant(self, id, **kwargs): # noqa: E501 """Get a specific notification target # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.get_notificant(id, ...
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def get_default_config(self): """ Returns the default collector settings """ config = super(FilestatCollector, self).get_default_config() config.update({ 'path': 'files', 'user_include': None, 'user_exclude': None, 'group_includ...
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def _socket_close(self): """cleanup after the socket is closed by the other end""" callback = self.__callback self.__callback = None try: if callback: callback(None, InterfaceError('connection closed')) finally: # Flush the job queue, don't...
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def workflow_stages(self) -> List[WorkflowStage]: """Return list of workflow stages. Returns: dict, resources of a specified pb """ workflow_stages = [] stages = DB.get_hash_value(self.key, 'workflow_stages') for index in range(len(ast.literal_eval(stages)))...
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def _load_general(data, targets, major_axis): """Load a list of arrays into a list of arrays specified by slices.""" for d_src, d_targets, axis in zip(data, targets, major_axis): # pylint: disable=too-many-nested-blocks if isinstance(d_targets, nd.NDArray): d_src.copyto(d_targets) el...
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def create(cls, bucket, key, value): """Create a new tag for bucket.""" with db.session.begin_nested(): obj = cls( bucket_id=as_bucket_id(bucket), key=key, value=value ) db.session.add(obj) return obj
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def arc_negative(self, xc, yc, radius, angle1, angle2): """Adds a circular arc of the given radius to the current path. The arc is centered at ``(xc, yc)``, begins at :obj:`angle1` and proceeds in the direction of decreasing angles to end at :obj:`angle2`. If :obj:`angle2...
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def get(self, name): """ Returns the struct, enum, or interface with the given name, or raises RpcException if no elements match that name. :Parameters: name Name of struct/enum/interface to return """ if self.structs.has_key(name): retu...
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def setedge(delta, is_multigraph, graph, orig, dest, idx, exists): """Change a delta to say that an edge was created or deleted""" if is_multigraph(graph): delta.setdefault(graph, {}).setdefault('edges', {})\ .setdefault(orig, {}).setdefault(dest, {})[idx] = bool(exists) else: de...
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def checkGeneTreeMatchesSpeciesTree(speciesTree, geneTree, processID): """ Function to check ids in gene tree all match nodes in species tree """ def fn(tree, l): if tree.internal: fn(tree.left, l) fn(tree.right, l) else: l.append(processID(tree.iD)) ...
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def apply_matrix_norm(m, v): """Equivalent to apply_matrix_pt(M, (p,q)) - apply_matrix_pt(M, (0,0))""" (a, b, c, d, e, f) = m (p, q) = v return (a*p+c*q, b*p+d*q)
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def assembleimage(patches, pmasks, gridids): r""" Assemble an image from a number of patches, patch masks and their grid ids. Parameters ---------- patches : sequence Sequence of patches. pmasks : sequence Sequence of associated patch mask...
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def _write_core_tables(options, module, core_results): """ Notes ----- Depending on function that was called for analysis, core_results may be a list of tuples (empirical), a dataframe, an array, or a single value. For the list of tuples from empirical, the second element of each tuple is t...
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def iter_headers(self): ''' Yield (header, value) tuples, skipping headers that are not allowed with the current response status code. ''' headers = self._headers.items() bad_headers = self.bad_headers.get(self._status_code) if bad_headers: headers = [h for h in h...
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def collect_samples_straggler_mitigation(agents, train_batch_size): """Collects at least train_batch_size samples. This is the legacy behavior as of 0.6, and launches extra sample tasks to potentially improve performance but can result in many wasted samples. """ num_timesteps_so_far = 0 traje...
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def run(self, *args, **kwargs): """Run the command; args/kwargs are added or replace the ones given to the constructor.""" _args, _kwargs = self._combine_arglist(args, kwargs) results, p = self._run_command(*_args, **_kwargs) return results
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def set_to_current(self, ): """Set the selection to the currently open one :returns: None :rtype: None :raises: None """ cur = self.get_current_file() if cur is not None: self.set_selection(cur) else: self.init_selection()
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def addFailure(self, test: unittest.case.TestCase, exc_info: tuple) -> None: """ Transforms the test in a serializable version of it and sends it to a queue for further analysis :param test: the test to save :param exc_info: tuple of the form (Exception class, Exception instance, traceb...
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def load_shutit_modules(self): """Responsible for loading the shutit modules based on the configured module paths. """ shutit_global.shutit_global_object.yield_to_draw() if self.loglevel <= logging.DEBUG: self.log('ShutIt module paths now: ',level=logging.DEBUG) self.log(self.host['shutit_module_path'],...
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def update_item(self, payload, last_modified=None): """ Update an existing item Accepts one argument, a dict containing Item data """ to_send = self.check_items([payload])[0] if last_modified is None: modified = payload["version"] else: mod...
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def wrap(lower, upper, x): """ Circularly alias the numeric value x into the range [lower,upper). Valid for cyclic quantities like orientations or hues. """ #I have no idea how I came up with this algorithm; it should be simplified. # # Note that Python's % operator works on floats and arra...
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def create_history_filename(self): """Create history_filename with INITHISTORY if it doesn't exist.""" if self.history_filename and not osp.isfile(self.history_filename): try: encoding.writelines(self.INITHISTORY, self.history_filename) except EnvironmentErro...
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def console_width(kwargs): """"Determine console_width.""" if sys.platform.startswith('win'): console_width = _find_windows_console_width() else: console_width = _find_unix_console_width() _width = kwargs.get('width', None) if _width: console_width = _width else: ...
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def update_hyperparameters(self, new_params, hyper_deriv_handling='default', exit_on_bounds=True, inf_on_error=True): r"""Update the kernel's hyperparameters to the new parameters. This will call :py:meth:`compute_K_L_alpha_ll` to update the state accordingly. Note that...
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def _initialize(self, *args, **kwargs): """Initiaize the mapping matcher with constructor arguments.""" self.items = None self.keys = None self.values = None if args: if len(args) != 2: raise TypeError("expected exactly two positional arguments, " ...
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def intersect(left, *rights, **kwargs): """ Calc intersection among datasets, :param left: collection :param rights: collection or list of collections :param distinct: whether to preserve duolicate entries :return: collection :Examples: >>> import pandas as pd >>> df1 = DataFrame(p...
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def xdr(self): """Create an base64 encoded XDR string for this :class:`Asset`. :return str: A base64 encoded XDR object representing this :class:`Asset`. """ asset = Xdr.StellarXDRPacker() asset.pack_Asset(self.to_xdr_object()) return base64.b64encode(asset....
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def key_assoc_val(d, func, exclude=None): """return the key associated with the value returned by func """ vs = list(d.values()) ks = list(d.keys()) key = ks[vs.index(func(vs))] return key
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def create(name, profile="splunk", **kwargs): ''' Create a splunk search CLI Example: splunk_search.create 'my search name' search='error msg' ''' client = _get_splunk(profile) search = client.saved_searches.create(name, **kwargs) # use the REST API to set owner and permissions ...
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def updatepLvlNextFunc(self): ''' A method that creates the pLvlNextFunc attribute as a sequence of AR1-style functions. Draws on the attributes PermGroFac and PrstIncCorr. If cycles=0, the product of PermGroFac across all periods must be 1.0, otherwise this method is invalid. ...
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def _process_interaction(self, source_id, interaction, text, pmid, extra_annotations): """Process an interaction JSON tuple from the ISI output, and adds up to one statement to the list of extracted statements. Parameters ---------- source_id : str ...
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def PrintExtractionSummary(self, processing_status): """Prints a summary of the extraction. Args: processing_status (ProcessingStatus): processing status. """ if not processing_status: self._output_writer.Write( 'WARNING: missing processing status information.\n') elif not pr...
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def get_neighbors_in_shell(self, origin, r, dr): """ Returns all sites in a shell centered on origin (coords) between radii r-dr and r+dr. Args: origin (3x1 array): Cartesian coordinates of center of sphere. r (float): Inner radius of shell. dr (float...
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def load_keras(json_path=None, hdf5_path=None, by_name=False): """ Load a pre-trained Keras model. :param json_path: The json path containing the keras model definition. :param hdf5_path: The HDF5 path containing the pre-trained keras model weights with or without the model architecture...
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def get_template_file(self): """ Retrieves Jinja2 template file path. """ if os.path.exists(os.path.join(self.theme_dir, 'base.html')): return os.path.join(self.theme_dir, 'base.html') default_dir = os.path.join(THEMES_DIR, 'default') if not os.path.exists(os.path.joi...
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def nova(*arg): """ Nova annotation for adding function to process nova notification. if event_type include wildcard, will put {pattern: function} into process_wildcard dict else will put {event_type: function} into process dict :param arg: event_type of notification """ check_event_type(O...
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def _duplicateLayer(self, layerName, newLayerName): """ This is the environment implementation of :meth:`BaseFont.duplicateLayer`. **layerName** will be a :ref:`type-string` representing a valid layer name. The value will have been normalized with :func:`normalizers.normalizeLayerName` ...
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def from_json_keyfile_dict(cls, keyfile_dict, scopes='', token_uri=None, revoke_uri=None): """Factory constructor from parsed JSON keyfile. Args: keyfile_dict: dict-like object, The parsed dictionary-like object containing the content...
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def statement(self, days=60): """Download the :py:class:`ofxparse.Statement` given the time range :param days: Number of days to look back at :type days: integer :rtype: :py:class:`ofxparser.Statement` """ parsed = self.download_parsed(days=days) return parsed.ac...
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def download_resource(self, download_url, target, guard): """ Helper to download and install external resources. """ download_url = download_url.strip() if not os.path.isabs(target): target = os.path.join(config.config_dir, target) if os.path.exists(os.path.join(targ...
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def do_echo(self, params): """ \x1b[1mNAME\x1b[0m echo - displays formatted data \x1b[1mSYNOPSIS\x1b[0m echo <fmtstr> [cmd1] [cmd2] ... [cmdN] \x1b[1mEXAMPLES\x1b[0m > echo hello hello > echo 'The value of /foo is %s' 'get /foo' bar """ values = ...
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def teardown_app_request(self, func: Callable) -> Callable: """Add a teardown request function to the app. This is designed to be used as a decorator, and has the same arguments as :meth:`~quart.Quart.teardown_request`. It applies to all requests to the app this blueprint is registered ...
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def load_tab_data(self): """Preload all data that for the tabs that will be displayed.""" for tab in self._tabs.values(): if tab.load and not tab.data_loaded: try: tab._data = tab.get_context_data(self.request) except Exception: ...
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def _get_geometry(self): """ Creates a multipolygon of bounding box polygons """ return shapely.geometry.MultiPolygon([bbox.geometry for bbox in self.bbox_list])
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def get_autype_list(self, code_list): """ 获取给定股票列表的复权因子 :param code_list: 股票列表,例如['HK.00700'] :return: (ret, data) ret == RET_OK 返回pd dataframe数据,data.DataFrame数据, 数据列格式如下 ret != RET_OK 返回错误字符串 ===================== =========== ====...
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def CorrectWrongEmails(self, askInput=True): '''Corrects Emails in wrong_emails''' for email in self.wrong_emails: corrected_email = self.CorrectEmail(email) self.emails[self.emails.index(email)] = corrected_email self.wrong_emails = []
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def enbase64(byte_str): """ Encode bytes/strings to base64. Args: - ``byte_str``: The string or bytes to base64 encode. Returns: - byte_str encoded as base64. """ # Python 3: base64.b64encode() expects type byte if isinstance(byte_str, str) and not PYTHON2: byte_s...
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def parse_args(): '''Parse command line arguments''' parser = argparse.ArgumentParser( description='Morphology feature plotter', epilog='Note: Makes plots of various features and superimposes\ input distributions. Plots are saved to PDF file.', formatter_class=argparse.ArgumentDe...
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def _get_sample(self, mode, encoding): """ Get a sample from the next current input file. :param str mode: The mode for opening the file. :param str|None encoding: The encoding of the file. None for open the file in binary mode. """ self._open_file(mode, encoding) ...
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def find_nearest_color_hexstr(hexdigits, color_table=None, method='euclid'): ''' Given a three or six-character hex digit string, return the nearest color index. Arguments: hexdigits: a three/6 digit hex string, e.g. 'b0b', '123456' Returns: int, None: index, or No...
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def get_requires(self, ignored=tuple()): """ a map of requirements to what requires it. ignored is an optional list of globbed patterns indicating packages, classes, etc that shouldn't be included in the provides map""" if self._requires is None: self._collect_requires_provi...
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def _objective_function(self, data_align, data_sup, labels, w, s, theta, bias): """Compute the objective function of the Semi-Supervised SRM See :eq:`sssrm-eq`. Parameters ---------- data_align : list of 2D arrays, element i has shape=[voxels_i, n_a...
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def neurite_volume_density(neurites, neurite_type=NeuriteType.all): '''Get the volume density per neurite The volume density is defined as the ratio of the neurite volume and the volume of the neurite's enclosing convex hull ''' def vol_density(neurite): '''volume density of a single neurit...
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def field_definition_post_save(sender, instance, created, raw, **kwargs): """ This signal is connected by all FieldDefinition subclasses see comment in FieldDefinitionBase for more details """ model_class = instance.model_def.model_class().render_state() field = instance.construct_for_migrate() ...
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def create(self, name, **kwargs): ''' Create a dataset, including the field types. Optionally, specify args such as: description : description of the dataset columns : list of columns (see docs/tests for list structure) category : must exist in /admin/metadata ...
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def patch_stdout_context(self, raw=False, patch_stdout=True, patch_stderr=True): """ Return a context manager that will replace ``sys.stdout`` with a proxy that makes sure that all printed text will appear above the prompt, and that it doesn't destroy the output from the renderer. ...
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def create_schema_from_xsd_directory(directory, version): """Create and fill the schema from a directory which contains xsd files. It calls fill_schema_from_xsd_file for each xsd file found. """ schema = Schema(version) for f in _get_xsd_from_directory(directory): logger.info("Loading s...
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def export(self): """Export all attributes of the user to a dict. :return: attributes of the user. :rtype: dict. """ data = {} data["name"] = self.name data["contributions"] = self.contributions data["avatar"] = self.avatar data["followers"] = sel...
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def local_bifurcation_angle(bif_point): '''Return the opening angle between two out-going sections in a bifurcation point We first ensure that the input point has only two children. The bifurcation angle is defined as the angle between the first non-zero length segments of a bifurcation point. ...
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def corelinkformat(resource): """ Return a formatted string representation of the corelinkformat in the tree. :return: the string """ msg = "<" + resource.path + ">;" assert(isinstance(resource, Resource)) keys = sorted(list(resource.attributes.keys())) f...
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def post(self, request, id=None, **kwargs): """ Handles post requests. """ if id: # No posting to an object detail page return HttpResponseForbidden() else: if not self.has_add_permission(request): return HttpResponseForbidden(_...
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def validate_ok_for_update(update): """Validate an update document.""" validate_is_mapping("update", update) # Update can not be {} if not update: raise ValueError('update only works with $ operators') first = next(iter(update)) if not first.startswith('$'): raise ValueError('upd...
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def trainHMM_fromFile(wav_file, gt_file, hmm_model_name, mt_win, mt_step): ''' This function trains a HMM model for segmentation-classification using a single annotated audio file ARGUMENTS: - wav_file: the path of the audio filename - gt_file: the path of the ground truth filename ...
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def get_filter_pillar(filter_name, pillar_key='acl', pillarenv=None, saltenv=None): ''' Helper that can be used inside a state SLS, in order to get the filter configuration given its name. filter_name The name of the filter. ...
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def get_sec_project_activity(self): """ Generate the "project activity" section of the report. """ logger.debug("Calculating Project Activity metrics.") data_path = os.path.join(self.data_dir, "activity") if not os.path.exists(data_path): os.makedirs(data_pa...
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def convert_into(input_path, output_path, output_format='csv', java_options=None, **kwargs): '''Convert tables from PDF into a file. Args: input_path (file like obj): File like object of tareget PDF file. output_path (str): File path of output file. output_format...
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def _check_constant_params( a, has_const=False, use_const=True, rtol=1e-05, atol=1e-08 ): """Helper func to interaction between has_const and use_const params. has_const use_const outcome --------- --------- ------- True True Confirm that a has constant; return a F...
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def export(self, directory): """Exports the stream to the given directory. The directory can't exist. You can later import this device by running import_stream on a device. """ if os.path.exists(directory): raise FileExistsError( "The stream export directory ...
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def _get_backend_base(): """Gets the base class for the custom database back-end. This should be the Django PostgreSQL back-end. However, some people are already using a custom back-end from another package. We are nice people and expose an option that allows them to configure the back-end we base ...
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