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msmbuilder/msmbuilder
msmbuilder/msm/core.py
https://github.com/msmbuilder/msmbuilder/blob/556a93a170782f47be53f4a1e9d740fb1c8272b3/msmbuilder/msm/core.py#L266-L308
def draw_samples(self, sequences, n_samples, random_state=None): """Sample conformations for a sequences of states. Parameters ---------- sequences : list or list of lists A sequence or list of sequences, in which each element corresponds to a state label. ...
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Sample conformations for a sequences of states. Parameters ---------- sequences : list or list of lists A sequence or list of sequences, in which each element corresponds to a state label. n_samples : int How many samples to return for any given state...
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python
train
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rgmining/ria
ria/bipartite_sum.py
https://github.com/rgmining/ria/blob/39223c67b7e59e10bd8e3a9062fb13f8bf893a5d/ria/bipartite_sum.py#L85-L120
def update(self): """ Update reviewers' anomalous scores and products' summaries. The update consists of 2 steps; Step1 (updating summaries): Update summaries of products with anomalous scores of reviewers and weight function. The weight is calculated by the manner in ...
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Update reviewers' anomalous scores and products' summaries. The update consists of 2 steps; Step1 (updating summaries): Update summaries of products with anomalous scores of reviewers and weight function. The weight is calculated by the manner in :class:`ria.biparti...
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python
train
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angr/angr
angr/sim_manager.py
https://github.com/angr/angr/blob/4e2f97d56af5419ee73bdb30482c8dd8ff5f3e40/angr/sim_manager.py#L610-L648
def merge(self, merge_func=None, merge_key=None, stash='active'): """ Merge the states in a given stash. :param stash: The stash (default: 'active') :param merge_func: If provided, instead of using state.merge, call this function with the states as the...
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Merge the states in a given stash. :param stash: The stash (default: 'active') :param merge_func: If provided, instead of using state.merge, call this function with the states as the argument. Should return the merged state. :param merge_key: If provided, sh...
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python
train
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ninuxorg/nodeshot
nodeshot/community/notifications/models/notification.py
https://github.com/ninuxorg/nodeshot/blob/2466f0a55f522b2696026f196436ce7ba3f1e5c6/nodeshot/community/notifications/models/notification.py#L67-L75
def send_email(self): """ send email notification according to user settings """ # send only if user notification setting is set to true if self.check_user_settings(): send_mail(_(self.type), self.email_message, settings.DEFAULT_FROM_EMAIL, [self.to_user.email]) return Tr...
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send email notification according to user settings
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python
train
43.333333
adamrothman/ftl
ftl/connection.py
https://github.com/adamrothman/ftl/blob/a88f3df1ecbdfba45035b65f833b8ffffc49b399/ftl/connection.py#L456-L477
async def get_pushed_stream_ids(self, parent_stream_id: int) -> List[int]: """Return a list of all streams pushed by the remote peer that are children of the specified stream. If no streams have been pushed when this method is called, waits until at least one stream has been pushed. """ ...
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Return a list of all streams pushed by the remote peer that are children of the specified stream. If no streams have been pushed when this method is called, waits until at least one stream has been pushed.
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python
train
42.5
iterative/dvc
dvc/logger.py
https://github.com/iterative/dvc/blob/8bb21261e34c9632453e09090de7ebe50e38d341/dvc/logger.py#L134-L140
def _progress_aware(self): """Add a new line if progress bar hasn't finished""" from dvc.progress import progress if not progress.is_finished: progress._print() progress.clearln()
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Add a new line if progress bar hasn't finished
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python
train
31.142857
pantsbuild/pants
src/python/pants/scm/git.py
https://github.com/pantsbuild/pants/blob/b72e650da0df685824ffdcc71988b8c282d0962d/src/python/pants/scm/git.py#L478-L488
def _realpath(self, relpath): """Follow symlinks to find the real path to a file or directory in the repo. :returns: if the expanded path points to a file, the relative path to that file; if a directory, the relative path + '/'; if a symlink outside the repo, a path starting with / ...
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Follow symlinks to find the real path to a file or directory in the repo. :returns: if the expanded path points to a file, the relative path to that file; if a directory, the relative path + '/'; if a symlink outside the repo, a path starting with / or ../.
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python
train
47.181818
aewallin/allantools
allantools/allantools.py
https://github.com/aewallin/allantools/blob/b5c695a5af4379fcea4d4ce93a066cb902e7ee0a/allantools/allantools.py#L157-L245
def mdev(data, rate=1.0, data_type="phase", taus=None): """ Modified Allan deviation. Used to distinguish between White and Flicker Phase Modulation. .. math:: \\sigma^2_{MDEV}(m\\tau_0) = { 1 \\over 2 (m \\tau_0 )^2 (N-3m+1) } \\sum_{j=1}^{N-3m+1} \\lbrace \\sum_{i=j}^{j+m-1...
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Modified Allan deviation. Used to distinguish between White and Flicker Phase Modulation. .. math:: \\sigma^2_{MDEV}(m\\tau_0) = { 1 \\over 2 (m \\tau_0 )^2 (N-3m+1) } \\sum_{j=1}^{N-3m+1} \\lbrace \\sum_{i=j}^{j+m-1} {x}_{i+2m} - 2x_{i+m} + x_{i} \\rbrace^2 Parameters --...
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python
train
28.595506
apache/incubator-mxnet
python/mxnet/contrib/svrg_optimization/svrg_module.py
https://github.com/apache/incubator-mxnet/blob/1af29e9c060a4c7d60eeaacba32afdb9a7775ba7/python/mxnet/contrib/svrg_optimization/svrg_module.py#L554-L579
def prepare(self, data_batch, sparse_row_id_fn=None): """Prepares two modules for processing a data batch. Usually involves switching bucket and reshaping. For modules that contain `row_sparse` parameters in KVStore, it prepares the `row_sparse` parameters based on the sparse_row_id_fn....
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Prepares two modules for processing a data batch. Usually involves switching bucket and reshaping. For modules that contain `row_sparse` parameters in KVStore, it prepares the `row_sparse` parameters based on the sparse_row_id_fn. When KVStore is used to update parameters for multi-dev...
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python
train
53.730769
jobovy/galpy
galpy/actionAngle/actionAngleIsochrone.py
https://github.com/jobovy/galpy/blob/9c5b9fe65d58835624dffe432be282060918ee08/galpy/actionAngle/actionAngleIsochrone.py#L191-L300
def _actionsFreqsAngles(self,*args,**kwargs): """ NAME: actionsFreqsAngles (_actionsFreqsAngles) PURPOSE: evaluate the actions, frequencies, and angles (jr,lz,jz,Omegar,Omegaphi,Omegaz,angler,anglephi,anglez) INPUT: Either: a) R,vR,vT,z,vz[,...
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NAME: actionsFreqsAngles (_actionsFreqsAngles) PURPOSE: evaluate the actions, frequencies, and angles (jr,lz,jz,Omegar,Omegaphi,Omegaz,angler,anglephi,anglez) INPUT: Either: a) R,vR,vT,z,vz[,phi]: 1) floats: phase-space value for single obj...
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python
train
40.309091
Clinical-Genomics/scout
scout/parse/variant/rank_score.py
https://github.com/Clinical-Genomics/scout/blob/90a551e2e1653a319e654c2405c2866f93d0ebb9/scout/parse/variant/rank_score.py#L3-L19
def parse_rank_score(rank_score_entry, case_id): """Parse the rank score Args: rank_score_entry(str): The raw rank score entry case_id(str) Returns: rank_score(float) """ rank_score = None if rank_score_entry: for family_info in rank_score_en...
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Parse the rank score Args: rank_score_entry(str): The raw rank score entry case_id(str) Returns: rank_score(float)
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python
test
28.764706
pyviz/holoviews
holoviews/core/util.py
https://github.com/pyviz/holoviews/blob/ae0dd2f3de448b0ca5e9065aabd6ef8d84c7e655/holoviews/core/util.py#L1960-L1981
def cftime_to_timestamp(date, time_unit='us'): """Converts cftime to timestamp since epoch in milliseconds Non-standard calendars (e.g. Julian or no leap calendars) are converted to standard Gregorian calendar. This can cause extra space to be added for dates that don't exist in the original calend...
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Converts cftime to timestamp since epoch in milliseconds Non-standard calendars (e.g. Julian or no leap calendars) are converted to standard Gregorian calendar. This can cause extra space to be added for dates that don't exist in the original calendar. In order to handle these dates correctly a custom ...
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python
train
36.5
liip/taxi
taxi/commands/commit.py
https://github.com/liip/taxi/blob/269423c1f1ab571bd01a522819afe3e325bfbff6/taxi/commands/commit.py#L24-L84
def commit(ctx, f, force_yes, date): """ Commits your work to the server. The [date] option can be used either as a single date (eg. 20.01.2014), as a range (eg. 20.01.2014-22.01.2014), or as a range with one of the dates omitted (eg. -22.01.2014). """ timesheet_collection = get_timesheet_collec...
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Commits your work to the server. The [date] option can be used either as a single date (eg. 20.01.2014), as a range (eg. 20.01.2014-22.01.2014), or as a range with one of the dates omitted (eg. -22.01.2014).
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python
train
41.704918
uw-it-aca/uw-restclients-canvas
uw_canvas/sis_import.py
https://github.com/uw-it-aca/uw-restclients-canvas/blob/9845faf33d49a8f06908efc22640c001116d6ea2/uw_canvas/sis_import.py#L18-L32
def import_str(self, csv, params={}): """ Imports a CSV string. https://canvas.instructure.com/doc/api/sis_imports.html#method.sis_imports_api.create """ if not self._canvas_account_id: raise MissingAccountID() params["import_type"] = SISImportModel.CSV_IMPO...
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Imports a CSV string. https://canvas.instructure.com/doc/api/sis_imports.html#method.sis_imports_api.create
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python
test
36.8
arne-cl/discoursegraphs
src/discoursegraphs/readwrite/mmax2.py
https://github.com/arne-cl/discoursegraphs/blob/842f0068a3190be2c75905754521b176b25a54fb/src/discoursegraphs/readwrite/mmax2.py#L416-L444
def sort_sentences_by_token_order(sentence_root_nodes, token_nodes): """ Given a list of sentence markables (i.e. sentence root nodes) and a list of lists of token markables (one list per sentence), returns a list of (sentence root node, token nodes) tuples. The result is sorted by the order in whic...
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Given a list of sentence markables (i.e. sentence root nodes) and a list of lists of token markables (one list per sentence), returns a list of (sentence root node, token nodes) tuples. The result is sorted by the order in which the tokens occur in the text. Parameters ---------- sentence_root_...
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python
train
40.827586
F-Secure/see
see/observer.py
https://github.com/F-Secure/see/blob/3e053e52a45229f96a12db9e98caf7fb3880e811/see/observer.py#L93-L108
def trigger(self, event, **kwargs): """ Triggers an event. All subscribed handlers will be executed, asynchronous ones won't block this call. @param event: (str|see.Event) event intended to be raised. """ with self._handlers.trigger_mutex: event = pr...
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Triggers an event. All subscribed handlers will be executed, asynchronous ones won't block this call. @param event: (str|see.Event) event intended to be raised.
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python
train
35.9375
bitesofcode/projexui
projexui/widgets/xchart/xchartaxis.py
https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/widgets/xchart/xchartaxis.py#L485-L508
def valueAt(self, percent): """ Returns the value at the inputed percent. :param percent | <float> :return <variant> """ values = self.values() if percent < 0: index = 0 elif percent > 1: index ...
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Returns the value at the inputed percent. :param percent | <float> :return <variant>
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python
train
28.041667
duniter/duniter-python-api
duniterpy/key/signing_key.py
https://github.com/duniter/duniter-python-api/blob/3a1e5d61a2f72f5afaf29d010c6cf4dff3648165/duniterpy/key/signing_key.py#L175-L193
def from_wif_or_ewif_file(path: str, password: Optional[str] = None) -> SigningKeyType: """ Return SigningKey instance from Duniter WIF or EWIF file :param path: Path to WIF of EWIF file :param password: Password needed for EWIF file """ with open(path, 'r') as fh: ...
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Return SigningKey instance from Duniter WIF or EWIF file :param path: Path to WIF of EWIF file :param password: Password needed for EWIF file
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python
train
36.631579
adrn/gala
gala/dynamics/nonlinear.py
https://github.com/adrn/gala/blob/ea95575a0df1581bb4b0986aebd6eea8438ab7eb/gala/dynamics/nonlinear.py#L12-L95
def fast_lyapunov_max(w0, hamiltonian, dt, n_steps, d0=1e-5, n_steps_per_pullback=10, noffset_orbits=2, t1=0., atol=1E-10, rtol=1E-10, nmax=0, return_orbit=True): """ Compute the maximum Lyapunov exponent using a C-implemented estimator that uses the DOPRI853 inte...
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Compute the maximum Lyapunov exponent using a C-implemented estimator that uses the DOPRI853 integrator. Parameters ---------- w0 : `~gala.dynamics.PhaseSpacePosition`, array_like Initial conditions. hamiltonian : `~gala.potential.Hamiltonian` dt : numeric Timestep. n_steps ...
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python
train
34.928571
larryng/narwal
narwal/reddit.py
https://github.com/larryng/narwal/blob/58c409a475c8ed865579a61d7010162ed8cef597/narwal/reddit.py#L512-L527
def submit_text(self, sr, title, text, follow=True): """Login required. POSTs a text submission. Returns :class:`things.Link` object if ``follow=True`` (default), or the string permalink of the new submission otherwise. Argument ``follow`` exists because reddit only returns the permalink afte...
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Login required. POSTs a text submission. Returns :class:`things.Link` object if ``follow=True`` (default), or the string permalink of the new submission otherwise. Argument ``follow`` exists because reddit only returns the permalink after POSTing a submission. In order to get detailed info on the ne...
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python
train
64.5
emencia/dr-dump
drdump/dependancies.py
https://github.com/emencia/dr-dump/blob/f03a2ed01fb82e6fe1df66f7fa82e646a3822d4b/drdump/dependancies.py#L71-L76
def get_dump_order(self, names): """ Return ordered dump names required for a given dump names list """ finded_names = self.get_dump_names(names) return [item for item in self if item in finded_names]
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Return ordered dump names required for a given dump names list
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python
train
39.166667
jantman/awslimitchecker
dev/release_utils.py
https://github.com/jantman/awslimitchecker/blob/e50197f70f3d0abcc5cfc7fde6336f548b790e34/dev/release_utils.py#L117-L128
def _find_travis_job(self, build, toxenv): """Given a build object, find the acceptance36 job""" for jobid in build.job_ids: j = self._travis.job(jobid) if 'TOXENV=%s' % toxenv in j.config['env']: logger.debug('Found %s job: %s', toxenv, j.number) ...
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Given a build object, find the acceptance36 job
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python
train
39.916667
pawamoy/python-getdoc
src/getdoc/__init__.py
https://github.com/pawamoy/python-getdoc/blob/7589605be746ecde54f3fb68a46c88242d9b6405/src/getdoc/__init__.py#L144-L151
def get_function_doc(function, config=default_config): """Return doc for a function.""" if config.exclude_function: for ex in config.exclude_function: if ex.match(function.__name__): return None return _doc_object(function, 'function', config=config)
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Return doc for a function.
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python
train
36.5
briwilcox/Concurrent-Pandas
concurrentpandas.py
https://github.com/briwilcox/Concurrent-Pandas/blob/22cb392dacb712e1bdb5b60c6ba7015c38445c99/concurrentpandas.py#L241-L248
def set_source_quandl(self, quandl_token): """ Set data source to Quandl """ self.data_worker = data_worker self.worker_args = {"function": Quandl.get, "input": self.input_queue, "output": self.output_map, "token": quandl_token} self.source_nam...
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Set data source to Quandl
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python
train
40.625
fprimex/zdesk
zdesk/zdesk_api.py
https://github.com/fprimex/zdesk/blob/851611c13b4d530e9df31390b3ec709baf0a0188/zdesk/zdesk_api.py#L3033-L3037
def sharing_agreement_show(self, id, **kwargs): "https://developer.zendesk.com/rest_api/docs/core/sharing_agreements#show-a-sharing-agreement" api_path = "/api/v2/sharing_agreements/{id}.json" api_path = api_path.format(id=id) return self.call(api_path, **kwargs)
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https://developer.zendesk.com/rest_api/docs/core/sharing_agreements#show-a-sharing-agreement
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python
train
58.2
spyder-ide/spyder
spyder/plugins/help/plugin.py
https://github.com/spyder-ide/spyder/blob/f76836ce1b924bcc4efd3f74f2960d26a4e528e0/spyder/plugins/help/plugin.py#L373-L402
def set_plain_text(self, text, is_code): """Set plain text docs""" # text is coming from utils.dochelpers.getdoc if type(text) is dict: name = text['name'] if name: rst_title = ''.join(['='*len(name), '\n', name, '\n', ...
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Set plain text docs
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python
train
34.266667
ToFuProject/tofu
tofu/utils.py
https://github.com/ToFuProject/tofu/blob/39d6b2e7ced9e13666572dfd37e19403f1d6ff8d/tofu/utils.py#L793-L823
def strip(self, strip=0, **kwdargs): """ Remove non-essential attributes to save memory / disk usage Useful to save a very compressed version of the object The higher strip => the more stripped the object Use strip=0 to recover all atributes See the difference by doing: ...
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Remove non-essential attributes to save memory / disk usage Useful to save a very compressed version of the object The higher strip => the more stripped the object Use strip=0 to recover all atributes See the difference by doing: > self.get_nbytes() > self.strip...
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python
train
35.516129
cloudtools/stacker
stacker/dag/__init__.py
https://github.com/cloudtools/stacker/blob/ad6013a03a560c46ba3c63c4d153336273e6da5d/stacker/dag/__init__.py#L118-L134
def delete_edge(self, ind_node, dep_node): """ Delete an edge from the graph. Args: ind_node (str): The independent node to delete an edge from. dep_node (str): The dependent node that has a dependency on the ind_node. Raises: Key...
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Delete an edge from the graph. Args: ind_node (str): The independent node to delete an edge from. dep_node (str): The dependent node that has a dependency on the ind_node. Raises: KeyError: Raised when the edge doesn't already exist.
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python
train
35.470588
materialsproject/pymatgen
pymatgen/analysis/ewald.py
https://github.com/materialsproject/pymatgen/blob/4ca558cf72f8d5f8a1f21dfdfc0181a971c186da/pymatgen/analysis/ewald.py#L473-L481
def minimize_matrix(self): """ This method finds and returns the permutations that produce the lowest ewald sum calls recursive function to iterate through permutations """ if self._algo == EwaldMinimizer.ALGO_FAST or \ self._algo == EwaldMinimizer.ALGO_BE...
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This method finds and returns the permutations that produce the lowest ewald sum calls recursive function to iterate through permutations
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python
train
49.555556
python/performance
performance/benchmarks/bm_regex_effbot.py
https://github.com/python/performance/blob/2a9524c0a5714e85106671bc61d750e800fe17db/performance/benchmarks/bm_regex_effbot.py#L97-L126
def init_benchmarks(n_values=None): """Initialize the strings we'll run the regexes against. The strings used in the benchmark are prefixed and suffixed by strings that are repeated n times. The sequence n_values contains the values for n. If n_values is None the values of n from the original benc...
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Initialize the strings we'll run the regexes against. The strings used in the benchmark are prefixed and suffixed by strings that are repeated n times. The sequence n_values contains the values for n. If n_values is None the values of n from the original benchmark are used. The generated list...
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python
test
28.7
tariqdaouda/pyGeno
pyGeno/tools/ProgressBar.py
https://github.com/tariqdaouda/pyGeno/blob/474b1250bf78ce5c7e7c3bbbfdbad9635d5a7d14/pyGeno/tools/ProgressBar.py#L60-L66
def log(self) : """logs stats about the progression, without printing anything on screen""" self.logs['epochDuration'].append(self.lastEpochDuration) self.logs['avg'].append(self.avg) self.logs['runtime'].append(self.runtime) self.logs['remtime'].append(self.remtime)
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logs stats about the progression, without printing anything on screen
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python
train
39.142857
brutasse/graphite-api
graphite_api/functions.py
https://github.com/brutasse/graphite-api/blob/0886b7adcf985a1e8bcb084f6dd1dc166a3f3dff/graphite_api/functions.py#L3158-L3243
def timeShift(requestContext, seriesList, timeShift, resetEnd=True, alignDST=False): """ Takes one metric or a wildcard seriesList, followed by a quoted string with the length of time (See ``from / until`` in the render\_api_ for examples of time formats). Draws the selected metrics s...
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Takes one metric or a wildcard seriesList, followed by a quoted string with the length of time (See ``from / until`` in the render\_api_ for examples of time formats). Draws the selected metrics shifted in time. If no sign is given, a minus sign ( - ) is implied which will shift the metric back in time...
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python
train
39.255814
edx/edx-enterprise
enterprise/views.py
https://github.com/edx/edx-enterprise/blob/aea91379ab0a87cd3bc798961fce28b60ee49a80/enterprise/views.py#L1778-L1808
def post(self, request, *args, **kwargs): """ Run some custom POST logic for Enterprise workflows before routing the user through existing views. """ # pylint: disable=unused-variable enterprise_customer_uuid, course_run_id, course_key, program_uuid = RouterView.get_path_variable...
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Run some custom POST logic for Enterprise workflows before routing the user through existing views.
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python
valid
51
siznax/wptools
scripts/wptool.py
https://github.com/siznax/wptools/blob/100eaea585c34aa9ad87a9eda8982bb4898f6ec9/scripts/wptool.py#L19-L30
def _html_image(page): """ returns HTML img tag """ source = _image(page) if not source: return alt = page.data.get('label') or page.data.get('title') img = "<img src=\"%s\"" % source img += " alt=\"%s\" title=\"%s\" " % (alt, alt) img += "align=\"right\" width=\"240\">" ...
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returns HTML img tag
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python
train
26.583333
intel-analytics/BigDL
pyspark/bigdl/nn/layer.py
https://github.com/intel-analytics/BigDL/blob/e9c19788285986ab789a2e2998f9a85d7524779f/pyspark/bigdl/nn/layer.py#L134-L142
def set_running_mean(self, running_mean): """ Set the running mean of the layer. Only use this method for a BatchNormalization layer. :param running_mean: a Numpy array. """ callBigDlFunc(self.bigdl_type, "setRunningMean", self.value, JTensor.from_nd...
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Set the running mean of the layer. Only use this method for a BatchNormalization layer. :param running_mean: a Numpy array.
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python
test
39.111111
vfilimonov/pydatastream
pydatastream/pydatastream.py
https://github.com/vfilimonov/pydatastream/blob/15d2adac1c83501715db1542373fa8428542816e/pydatastream/pydatastream.py#L119-L122
def version(self): """Return version of the TR DWE.""" res = self.client.service.Version() return '.'.join([ustr(x) for x in res[0]])
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Return version of the TR DWE.
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python
train
38.5
edx/edx-enterprise
integrated_channels/xapi/serializers.py
https://github.com/edx/edx-enterprise/blob/aea91379ab0a87cd3bc798961fce28b60ee49a80/integrated_channels/xapi/serializers.py#L76-L89
def get_course_duration(self, obj): """ Get course's duration as a timedelta. Arguments: obj (CourseOverview): CourseOverview object Returns: (timedelta): Duration of a course. """ duration = obj.end - obj.start if obj.start and obj.end else None...
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Get course's duration as a timedelta. Arguments: obj (CourseOverview): CourseOverview object Returns: (timedelta): Duration of a course.
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python
valid
29.142857
erikrose/conway
bin/conway.py
https://github.com/erikrose/conway/blob/4c185d5f2d4b942a0710d7593926e7b749b16015/bin/conway.py#L98-L102
def draw(board, term, cells): """Draw a board to the terminal.""" for (x, y), state in board.iteritems(): with term.location(x, y): print cells[state],
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Draw a board to the terminal.
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python
train
35
devassistant/devassistant
devassistant/yaml_assistant.py
https://github.com/devassistant/devassistant/blob/2dbfeaa666a64127263664d18969c55d19ecc83e/devassistant/yaml_assistant.py#L141-L158
def proper_kwargs(self, section, kwargs): """Returns kwargs updated with proper meta variables (like __assistant__). If this method is run repeatedly with the same section and the same kwargs, it always modifies kwargs in the same way. """ kwargs['__section__'] = section ...
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Returns kwargs updated with proper meta variables (like __assistant__). If this method is run repeatedly with the same section and the same kwargs, it always modifies kwargs in the same way.
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python
train
46.333333
watson-developer-cloud/python-sdk
ibm_watson/assistant_v2.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/assistant_v2.py#L948-L957
def _from_dict(cls, _dict): """Initialize a MessageContext object from a json dictionary.""" args = {} if 'global' in _dict: args['global_'] = MessageContextGlobal._from_dict( _dict.get('global')) if 'skills' in _dict: args['skills'] = MessageConte...
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Initialize a MessageContext object from a json dictionary.
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python
train
39.5
lbenitez000/trparse
trparse.py
https://github.com/lbenitez000/trparse/blob/1f932d882a98b062b540b6f4bc2ecb0f35b92e97/trparse.py#L88-L158
def loads(data): """Parser entry point. Parses the output of a traceroute execution""" data += "\n_EOS_" # Append EOS token. Helps to match last RE_HOP # Get headers match_dest = RE_HEADER.search(data) dest_name = match_dest.group(1) dest_ip = match_dest.group(2) # The Traceroute is the ro...
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Parser entry point. Parses the output of a traceroute execution
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python
train
34.422535
thespacedoctor/fundamentals
fundamentals/mysql/insert_list_of_dictionaries_into_database_tables.py
https://github.com/thespacedoctor/fundamentals/blob/1d2c007ac74442ec2eabde771cfcacdb9c1ab382/fundamentals/mysql/insert_list_of_dictionaries_into_database_tables.py#L33-L158
def insert_list_of_dictionaries_into_database_tables( dbConn, log, dictList, dbTableName, uniqueKeyList=[], dateModified=False, dateCreated=True, batchSize=2500, replace=False, dbSettings=False): """insert list of dictionaries into data...
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insert list of dictionaries into database tables **Key Arguments:** - ``dbConn`` -- mysql database connection - ``log`` -- logger - ``dictList`` -- list of python dictionaries to add to the database table - ``dbTableName`` -- name of the database table - ``uniqueKeyList`` --...
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python
train
31.412698
cloudsmith-io/cloudsmith-cli
cloudsmith_cli/core/rest.py
https://github.com/cloudsmith-io/cloudsmith-cli/blob/5bc245ca5d0bfa85380be48e7c206b4c86cc6c8e/cloudsmith_cli/core/rest.py#L134-L215
def request( self, method, url, query_params=None, headers=None, body=None, post_params=None, _preload_content=True, _request_timeout=None, ): """ :param method: http request method :param url: http request url :...
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:param method: http request method :param url: http request url :param query_params: query parameters in the url :param headers: http request headers :param body: request json body, for `application/json` :param post_params: request post parameters, `a...
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python
train
39.02439
fedora-python/pyp2rpm
pyp2rpm/utils.py
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/utils.py#L59-L101
def build_srpm(specfile, save_dir): """Builds a srpm from given specfile using rpmbuild. Generated srpm is stored in directory specified by save_dir. Args: specfile: path to a specfile save_dir: path to source and build tree """ logger.info('Starting rpmbuild to build: {0} SRPM.'.fo...
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Builds a srpm from given specfile using rpmbuild. Generated srpm is stored in directory specified by save_dir. Args: specfile: path to a specfile save_dir: path to source and build tree
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python
train
45.023256
opencobra/cobrapy
cobra/flux_analysis/variability.py
https://github.com/opencobra/cobrapy/blob/9d1987cdb3a395cf4125a3439c3b002ff2be2009/cobra/flux_analysis/variability.py#L304-L335
def find_essential_reactions(model, threshold=None, processes=None): """Return a set of essential reactions. A reaction is considered essential if restricting its flux to zero causes the objective, e.g., the growth rate, to also be zero, below the threshold, or infeasible. Parameters --------...
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Return a set of essential reactions. A reaction is considered essential if restricting its flux to zero causes the objective, e.g., the growth rate, to also be zero, below the threshold, or infeasible. Parameters ---------- model : cobra.Model The model to find the essential reactions...
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python
valid
38.6875
cons3rt/pycons3rt
pycons3rt/slack.py
https://github.com/cons3rt/pycons3rt/blob/f004ab3a35c5bff2f698131fef3b2a8ed5a7596d/pycons3rt/slack.py#L114-L129
def add_attachment(self, attachment): """Adds an attachment to the SlackMessage payload This public method adds a slack message to the attachment list. :param attachment: SlackAttachment object :return: None """ log = logging.getLogger(self.cls_logger + '.add_at...
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Adds an attachment to the SlackMessage payload This public method adds a slack message to the attachment list. :param attachment: SlackAttachment object :return: None
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python
train
38.4375
Capitains/MyCapytain
MyCapytain/resources/texts/remote/cts.py
https://github.com/Capitains/MyCapytain/blob/b11bbf6b6ae141fc02be70471e3fbf6907be6593/MyCapytain/resources/texts/remote/cts.py#L63-L88
def getValidReff(self, level=1, reference=None): """ Given a resource, CtsText will compute valid reffs :param level: Depth required. If not set, should retrieve first encountered level (1 based) :type level: Int :param reference: CapitainsCtsPassage reference :type reference: C...
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Given a resource, CtsText will compute valid reffs :param level: Depth required. If not set, should retrieve first encountered level (1 based) :type level: Int :param reference: CapitainsCtsPassage reference :type reference: CtsReference :rtype: list(str) :returns: List ...
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python
train
34.461538
swimlane/swimlane-python
swimlane/core/fields/list.py
https://github.com/swimlane/swimlane-python/blob/588fc503a76799bcdb5aecdf2f64a6ee05e3922d/swimlane/core/fields/list.py#L207-L219
def set_swimlane(self, value): """Convert from list of dicts with values to list of values Cache list items with their ID pairs to restore existing IDs to unmodified values to prevent workflow evaluating on each save for any already existing values """ value = value or [] ...
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Convert from list of dicts with values to list of values Cache list items with their ID pairs to restore existing IDs to unmodified values to prevent workflow evaluating on each save for any already existing values
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python
train
42
utek/pyseaweed
pyseaweed/weed.py
https://github.com/utek/pyseaweed/blob/218049329885425a2b8370157fa44952e64516be/pyseaweed/weed.py#L140-L147
def delete_file(self, fid): """ Delete file from WeedFS :param string fid: File ID """ url = self.get_file_url(fid) return self.conn.delete_data(url)
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Delete file from WeedFS :param string fid: File ID
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python
train
23.875
hyperledger/sawtooth-core
validator/sawtooth_validator/journal/consensus/dev_mode/dev_mode_consensus.py
https://github.com/hyperledger/sawtooth-core/blob/8cf473bc2207e51f02bd182d825158a57d72b098/validator/sawtooth_validator/journal/consensus/dev_mode/dev_mode_consensus.py#L70-L101
def initialize_block(self, block_header): """Do initialization necessary for the consensus to claim a block, this may include initiating voting activates, starting proof of work hash generation, or create a PoET wait timer. Args: block_header (BlockHeader): the BlockHeader t...
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Do initialization necessary for the consensus to claim a block, this may include initiating voting activates, starting proof of work hash generation, or create a PoET wait timer. Args: block_header (BlockHeader): the BlockHeader to initialize. Returns: True
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python
train
41.46875
redcap-tools/PyCap
redcap/project.py
https://github.com/redcap-tools/PyCap/blob/f44c9b62a4f62675aa609c06608663f37e12097e/redcap/project.py#L591-L625
def delete_file(self, record, field, return_format='json', event=None): """ Delete a file from REDCap Notes ----- There is no undo button to this. Parameters ---------- record : str record ID field : str field name ...
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python
train
27.914286
hickeroar/simplebayes
simplebayes/categories.py
https://github.com/hickeroar/simplebayes/blob/b8da72c50d20b6f8c0df2c2f39620715b08ddd32/simplebayes/categories.py#L33-L44
def add_category(self, name): """ Adds a bayes category that we can later train :param name: name of the category :type name: str :return: the requested category :rtype: BayesCategory """ category = BayesCategory(name) self.categories[name] = cate...
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Adds a bayes category that we can later train :param name: name of the category :type name: str :return: the requested category :rtype: BayesCategory
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python
train
28.083333
JdeRobot/base
src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py
https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py#L8278-L8289
def serial_udb_extra_f6_send(self, sue_PITCHGAIN, sue_PITCHKD, sue_RUDDER_ELEV_MIX, sue_ROLL_ELEV_MIX, sue_ELEVATOR_BOOST, force_mavlink1=False): ''' Backwards compatible version of SERIAL_UDB_EXTRA F6: format sue_PITCHGAIN : Serial UDB Extra PITCHGAIN Propor...
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Backwards compatible version of SERIAL_UDB_EXTRA F6: format sue_PITCHGAIN : Serial UDB Extra PITCHGAIN Proportional Control (float) sue_PITCHKD : Serial UDB Extra Pitch Rate Control (float) sue_RUDDER_ELEV_MIX : Serial UDB Extra Rudder to...
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python
train
77
pyusb/pyusb
usb/control.py
https://github.com/pyusb/pyusb/blob/ffe6faf42c6ad273880b0b464b9bbf44c1d4b2e9/usb/control.py#L188-L206
def get_configuration(dev): r"""Get the current active configuration of the device. dev is the Device object to which the request will be sent to. This function differs from the Device.get_active_configuration method because the later may use cached data, while this function always does a devi...
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r"""Get the current active configuration of the device. dev is the Device object to which the request will be sent to. This function differs from the Device.get_active_configuration method because the later may use cached data, while this function always does a device request.
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python
train
34.315789
mbakker7/timml
timml/aquifer.py
https://github.com/mbakker7/timml/blob/91e99ad573cb8a9ad8ac1fa041c3ca44520c2390/timml/aquifer.py#L85-L98
def findlayer(self, z): ''' Returns layer-number, layer-type and model-layer-number''' if z > self.z[0]: modellayer, ltype = -1, 'above' layernumber = None elif z < self.z[-1]: modellayer, ltype = len(self.layernumber), 'below' layernumber ...
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Returns layer-number, layer-type and model-layer-number
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python
train
39.642857
juju/charm-helpers
charmhelpers/contrib/openstack/amulet/utils.py
https://github.com/juju/charm-helpers/blob/aa785c40c3b7a8c69dbfbc7921d6b9f30142e171/charmhelpers/contrib/openstack/amulet/utils.py#L478-L503
def authenticate_keystone(self, keystone_ip, username, password, api_version=False, admin_port=False, user_domain_name=None, domain_name=None, project_domain_name=None, project_name=None): """Authenticate with Keystone""" ...
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Authenticate with Keystone
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python
train
42.153846
upsight/doctor
doctor/routing.py
https://github.com/upsight/doctor/blob/2cf1d433f6f1aa1355644b449a757c0660793cdd/doctor/routing.py#L88-L112
def create_http_method(logic: Callable, http_method: str, handle_http: Callable, before: Callable = None, after: Callable = None) -> Callable: """Create a handler method to be used in a handler class. :param callable logic: The underlying function to execute with t...
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python
train
42.48
tomprince/nomenclature
nomenclature/syscalls.py
https://github.com/tomprince/nomenclature/blob/81af4a590034f75211f028d485c0d83fceda5af2/nomenclature/syscalls.py#L15-L24
def unshare(flags): """ Disassociate parts of the process execution context. :param flags int: A bitmask that specifies which parts of the execution context should be unshared. """ res = lib.unshare(flags) if res != 0: _check_error(ffi.errno)
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Disassociate parts of the process execution context. :param flags int: A bitmask that specifies which parts of the execution context should be unshared.
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python
train
27.4
MSchnei/pyprf_feature
pyprf_feature/analysis/model_creation_utils.py
https://github.com/MSchnei/pyprf_feature/blob/49004ede7ae1ddee07a30afe9ce3e2776750805c/pyprf_feature/analysis/model_creation_utils.py#L594-L662
def crt_prf_ftr_tc(aryMdlRsp, aryTmpExpInf, varNumVol, varTr, varTmpOvsmpl, switchHrfSet, tplPngSize, varPar, dctPrm=None, lgcPrint=True): """Create all spatial x feature prf time courses. Parameters ---------- aryMdlRsp : 2d numpy array, shape [n_x_pos * n_y_pos *...
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Create all spatial x feature prf time courses. Parameters ---------- aryMdlRsp : 2d numpy array, shape [n_x_pos * n_y_pos * n_sd, n_cond] Responses of 2D Gauss models to spatial conditions aryTmpExpInf: 2d numpy array, shape [unknown, 4] Temporal information about conditions varNumV...
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python
train
40.130435
CivicSpleen/ambry
ambry/identity.py
https://github.com/CivicSpleen/ambry/blob/d7f2be4bf1f7ffd086f3fadd4fcae60c32473e42/ambry/identity.py#L881-L886
def increment(cls, v): """Increment the version number of an object number of object number string""" if not isinstance(v, ObjectNumber): v = ObjectNumber.parse(v) return v.rev(v.revision+1)
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Increment the version number of an object number of object number string
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python
train
37
aliyun/aliyun-odps-python-sdk
odps/df/expr/collections.py
https://github.com/aliyun/aliyun-odps-python-sdk/blob/4b0de18f5864386df6068f26f026e62f932c41e4/odps/df/expr/collections.py#L1206-L1234
def min_max_scale(expr, columns=None, feature_range=(0, 1), preserve=False, suffix='_scaled', group=None): """ Resize a data frame by max / min values, i.e., (X - min(X)) / (max(X) - min(X)) :param DataFrame expr: input DataFrame :param feature_range: the target range to resize the value into, i.e., v ...
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Resize a data frame by max / min values, i.e., (X - min(X)) / (max(X) - min(X)) :param DataFrame expr: input DataFrame :param feature_range: the target range to resize the value into, i.e., v * (b - a) + a :param bool preserve: determine whether input data should be kept. If True, scaled input data will be...
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python
train
52.37931
aegirhall/console-menu
consolemenu/validators/regex.py
https://github.com/aegirhall/console-menu/blob/1a28959d6f1dd6ac79c87b11efd8529d05532422/consolemenu/validators/regex.py#L16-L30
def validate(self, input_string): """ Validate input_string against a regex pattern :return: True if match / False otherwise """ validation_result = False try: validation_result = bool(match(pattern=self.pattern, string=input_string)) except TypeError...
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Validate input_string against a regex pattern :return: True if match / False otherwise
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python
train
47.6
CalebBell/fluids
fluids/friction.py
https://github.com/CalebBell/fluids/blob/57f556752e039f1d3e5a822f408c184783db2828/fluids/friction.py#L2913-L3038
def friction_factor_curved(Re, Di, Dc, roughness=0.0, Method=None, Rec_method='Schmidt', laminar_method='Schmidt laminar', turbulent_method='Schmidt turbulent', Darcy=True, AvailableMethods=False): r'''Cal...
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r'''Calculates friction factor fluid flowing in a curved pipe or helical coil, supporting both laminar and turbulent regimes. Selects the appropriate regime by default, and has default correlation choices. Optionally, a specific correlation can be specified with the `Method` keyword. The defa...
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python
train
36.65873
google/grr
grr/client/grr_response_client/client_actions/windows/windows.py
https://github.com/google/grr/blob/5cef4e8e2f0d5df43ea4877e9c798e0bf60bfe74/grr/client/grr_response_client/client_actions/windows/windows.py#L177-L186
def WmiQueryFromClient(args): """Run the WMI query and return the data.""" query = args.query base_object = args.base_object or r"winmgmts:\root\cimv2" if not query.upper().startswith("SELECT "): raise RuntimeError("Only SELECT WMI queries allowed.") for response_dict in RunWMIQuery(query, baseobj=base_...
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Run the WMI query and return the data.
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python
train
34.3
rsmuc/health_monitoring_plugins
health_monitoring_plugins/idrac.py
https://github.com/rsmuc/health_monitoring_plugins/blob/7ac29dfb9fe46c055b018cb72ad0d7d8065589b9/health_monitoring_plugins/idrac.py#L260-L279
def process_temperature_sensors(helper, session): """process the temperature sensors""" snmp_result_temp_sensor_names = helper.walk_snmp_values( session, helper, DEVICE_TEMPERATURE_OIDS['oid_temperature_probe_location'], "temperature sensors") snmp_result_temp_sensor_stat...
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process the temperature sensors
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python
train
57
apple/turicreate
src/unity/python/turicreate/meta/decompiler/simple_instructions.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/src/unity/python/turicreate/meta/decompiler/simple_instructions.py#L829-L849
def STORE_SLICE_3(self, instr): 'obj[lower:upper] = expr' upper = self.ast_stack.pop() lower = self.ast_stack.pop() value = self.ast_stack.pop() expr = self.ast_stack.pop() kw = dict(lineno=instr.lineno, col_offset=0) slice = _ast.Slice(lower=lower, step...
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obj[lower:upper] = expr
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python
train
33.809524
mitsei/dlkit
dlkit/json_/relationship/sessions.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/relationship/sessions.py#L205-L229
def get_relationship(self, relationship_id): """Gets the ``Relationship`` specified by its ``Id``. arg: relationship_id (osid.id.Id): the ``Id`` of the ``Relationship`` to retrieve return: (osid.relationship.Relationship) - the returned ``Relationship`` ...
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Gets the ``Relationship`` specified by its ``Id``. arg: relationship_id (osid.id.Id): the ``Id`` of the ``Relationship`` to retrieve return: (osid.relationship.Relationship) - the returned ``Relationship`` raise: NotFound - no ``Relationship`` found with the ...
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python
train
51.12
MillionIntegrals/vel
vel/rl/algo/policy_gradient/a2c.py
https://github.com/MillionIntegrals/vel/blob/e0726e1f63742b728966ccae0c8b825ea0ba491a/vel/rl/algo/policy_gradient/a2c.py#L41-L71
def calculate_gradient(self, batch_info, device, model, rollout): """ Calculate loss of the supplied rollout """ evaluator = model.evaluate(rollout) # Use evaluator interface to get the what we are interested in from the model advantages = evaluator.get('rollout:advantages') ret...
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python
train
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ThreatConnect-Inc/tcex
tcex/tcex_ti_group.py
https://github.com/ThreatConnect-Inc/tcex/blob/dd4d7a1ef723af1561687120191886b9a2fd4b47/tcex/tcex_ti_group.py#L239-L257
def tag(self, name, formatter=None): """Return instance of Tag. Args: name (str): The value for this tag. formatter (method, optional): A method that take a tag value and returns a formatted tag. Returns: obj: An instance of Tag. """ ...
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python
train
27.947368
edx/xblock-utils
xblockutils/resources.py
https://github.com/edx/xblock-utils/blob/2960666907d3eea1ed312fa87d811e78cd043702/xblockutils/resources.py#L100-L107
def render_template(self, template_path, context=None): """ This function has been deprecated. It calls render_django_template to support backwards compatibility. """ warnings.warn( "ResourceLoader.render_template has been deprecated in favor of ResourceLoader.render_django_t...
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This function has been deprecated. It calls render_django_template to support backwards compatibility.
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python
train
49.75
lappis-unb/salic-ml
src/salicml/metrics/finance/total_receipts.py
https://github.com/lappis-unb/salic-ml/blob/1b3ebc4f8067740999897ccffd9892dc94482a93/src/salicml/metrics/finance/total_receipts.py#L9-L36
def total_receipts(pronac, dt): """ This metric calculates the project total of receipts and compare it to projects in the same segment output: is_outlier: True if projects receipts is not compatible to others projects in the same segment total_receipts: a...
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python
train
40.071429
has2k1/plotnine
plotnine/stats/density.py
https://github.com/has2k1/plotnine/blob/566e579af705367e584fb27a74e6c5199624ca89/plotnine/stats/density.py#L96-L120
def kde_sklearn(data, grid, **kwargs): """ Kernel Density Estimation with Scikit-learn Parameters ---------- data : numpy.array Data points used to compute a density estimator. It has `n x p` dimensions, representing n points and p variables. grid : numpy.array D...
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python
train
28.96
hsolbrig/PyShEx
pyshex/utils/value_set_utils.py
https://github.com/hsolbrig/PyShEx/blob/9d659cc36e808afd66d4a6d60e8ea21cb12eb744/pyshex/utils/value_set_utils.py#L32-L35
def literal_matches_objectliteral(v1: Literal, v2: ShExJ.ObjectLiteral) -> bool: """ Compare :py:class:`rdflib.Literal` with :py:class:`ShExJ.objectLiteral` """ v2_lit = Literal(str(v2.value), datatype=iriref_to_uriref(v2.type), lang=str(v2.language) if v2.language else None) return v1 == v2_lit
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Compare :py:class:`rdflib.Literal` with :py:class:`ShExJ.objectLiteral`
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python
train
76.25
jhermann/rituals
src/rituals/acts/basic.py
https://github.com/jhermann/rituals/blob/1534f50d81e19bbbe799e2eba0acdefbce047c06/src/rituals/acts/basic.py#L105-L120
def build(ctx, docs=False): """Build the project.""" cfg = config.load() ctx.run("python setup.py build") if docs: for doc_path in ('docs', 'doc'): if os.path.exists(cfg.rootjoin(doc_path, 'conf.py')): break else: doc_path = None if doc_p...
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Build the project.
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python
valid
27.6875
bxlab/bx-python
lib/bx_extras/stats.py
https://github.com/bxlab/bx-python/blob/09cb725284803df90a468d910f2274628d8647de/lib/bx_extras/stats.py#L1140-L1162
def ltiecorrect(rankvals): """ Corrects for ties in Mann Whitney U and Kruskal Wallis H tests. See Siegel, S. (1956) Nonparametric Statistics for the Behavioral Sciences. New York: McGraw-Hill. Code adapted from |Stat rankind.c code. Usage: ltiecorrect(rankvals) Returns: T correction factor for U or H """ ...
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python
train
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orbingol/NURBS-Python
geomdl/helpers.py
https://github.com/orbingol/NURBS-Python/blob/b1c6a8b51cf143ff58761438e93ba6baef470627/geomdl/helpers.py#L307-L326
def basis_functions_ders(degree, knot_vector, spans, knots, order): """ Computes derivatives of the basis functions for a list of parameters. :param degree: degree, :math:`p` :type degree: int :param knot_vector: knot vector, :math:`U` :type knot_vector: list, tuple :param spans: list of knot s...
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python
train
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agile-geoscience/striplog
striplog/legend.py
https://github.com/agile-geoscience/striplog/blob/8033b673a151f96c29802b43763e863519a3124c/striplog/legend.py#L637-L682
def to_csv(self): """ Renders a legend as a CSV string. No arguments. Returns: str: The legend as a CSV. """ # We can't delegate this to Decor because we need to know the superset # of all Decor properties. There may be lots of blanks. header...
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Renders a legend as a CSV string. No arguments. Returns: str: The legend as a CSV.
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python
test
33.347826
ralphje/imagemounter
imagemounter/volume.py
https://github.com/ralphje/imagemounter/blob/86213781c366cad65096447d91f522f0a3fb4b93/imagemounter/volume.py#L597-L632
def mount(self, fstype=None): """Based on the file system type as determined by :func:`determine_fs_type`, the proper mount command is executed for this volume. The volume is mounted in a temporary path (or a pretty path if :attr:`pretty` is enabled) in the mountpoint as specified by :attr:`moun...
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Based on the file system type as determined by :func:`determine_fs_type`, the proper mount command is executed for this volume. The volume is mounted in a temporary path (or a pretty path if :attr:`pretty` is enabled) in the mountpoint as specified by :attr:`mountpoint`. If the file system type...
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python
train
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hyperledger/sawtooth-core
cli/sawtooth_cli/admin_command/keygen.py
https://github.com/hyperledger/sawtooth-core/blob/8cf473bc2207e51f02bd182d825158a57d72b098/cli/sawtooth_cli/admin_command/keygen.py#L65-L133
def do_keygen(args): """Executes the key generation operation, given the parsed arguments. Args: args (:obj:`Namespace`): The parsed args. """ if args.key_name is not None: key_name = args.key_name else: key_name = 'validator' key_dir = get_key_dir() if not os.path...
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Executes the key generation operation, given the parsed arguments. Args: args (:obj:`Namespace`): The parsed args.
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python
train
37
openstax/cnx-archive
cnxarchive/database.py
https://github.com/openstax/cnx-archive/blob/d31d34aa8bbc8a9fde6cd4227a0df92726e8daf4/cnxarchive/database.py#L126-L138
def get_tree(ident_hash, cursor, as_collated=False): """Return a JSON representation of the binder tree for ``ident_hash``.""" uuid, version = split_ident_hash(ident_hash) cursor.execute(SQL['get-tree-by-uuid-n-version'], (uuid, version, as_collated,)) try: tree = cursor.fetch...
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Return a JSON representation of the binder tree for ``ident_hash``.
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python
train
37.538462
moonso/loqusdb
loqusdb/utils/profiling.py
https://github.com/moonso/loqusdb/blob/792dcd0d461aff5adc703c49eebf58964913a513/loqusdb/utils/profiling.py#L128-L151
def compare_profiles(profile1, profile2): """ Given two profiles, determine the ratio of similarity, i.e. the hamming distance between the strings. Args: profile1/2 (str): profile string Returns: similarity_ratio (float): the ratio of similiarity (0-1) "...
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Given two profiles, determine the ratio of similarity, i.e. the hamming distance between the strings. Args: profile1/2 (str): profile string Returns: similarity_ratio (float): the ratio of similiarity (0-1)
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python
train
23.375
kajala/django-jutil
jutil/urls.py
https://github.com/kajala/django-jutil/blob/2abd93ebad51042744eaeb1ee1074ed0eb55ad0c/jutil/urls.py#L1-L14
def url_equals(a: str, b: str) -> bool: """ Compares two URLs/paths and returns True if they point to same URI. For example, querystring parameters can be different order but URLs are still equal. :param a: URL/path :param b: URL/path :return: True if URLs/paths are equal """ from urllib...
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python
train
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xoolive/traffic
traffic/data/adsb/opensky.py
https://github.com/xoolive/traffic/blob/d1a8878098f16759f6b6e0e8d8b8f32e34a680a8/traffic/data/adsb/opensky.py#L32-L44
def plot( self, ax: GeoAxesSubplot, cmap: str = "inferno", s: int = 5, **kwargs ) -> Artist: """Plotting function. All arguments are passed to ax.scatter""" return ax.scatter( self.df.longitude, self.df.latitude, s=s, transform=PlateCarree(), ...
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Plotting function. All arguments are passed to ax.scatter
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python
train
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poppy-project/pypot
pypot/vrep/remoteApiBindings/vrep.py
https://github.com/poppy-project/pypot/blob/d9c6551bbc87d45d9d1f0bc15e35b616d0002afd/pypot/vrep/remoteApiBindings/vrep.py#L1025-L1046
def simxSetStringSignal(clientID, signalName, signalValue, operationMode): ''' Please have a look at the function description/documentation in the V-REP user manual ''' sigV=signalValue if sys.version_info[0] == 3: if type(signalName) is str: signalName=signalName.encode('utf-8'...
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python
train
44.681818
googlefonts/glyphsLib
Lib/glyphsLib/glyphdata.py
https://github.com/googlefonts/glyphsLib/blob/9c12dc70c8d13f08d92b824e6710f6e3bb5037bb/Lib/glyphsLib/glyphdata.py#L89-L139
def get_glyph(glyph_name, data=None): """Return a named tuple (Glyph) containing information derived from a glyph name akin to GSGlyphInfo. The information is derived from an included copy of GlyphData.xml and GlyphData_Ideographs.xml, going purely by the glyph name. """ # Read data on first u...
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python
train
30.215686
allenai/allennlp
allennlp/modules/sampled_softmax_loss.py
https://github.com/allenai/allennlp/blob/648a36f77db7e45784c047176074f98534c76636/allennlp/modules/sampled_softmax_loss.py#L11-L42
def _choice(num_words: int, num_samples: int) -> Tuple[np.ndarray, int]: """ Chooses ``num_samples`` samples without replacement from [0, ..., num_words). Returns a tuple (samples, num_tries). """ num_tries = 0 num_chosen = 0 def get_buffer() -> np.ndarray: log_samples = np.random.r...
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python
train
30.65625
learningequality/ricecooker
ricecooker/commands.py
https://github.com/learningequality/ricecooker/blob/2f0385282500cb77ef2894646c6f9ce11bd7a853/ricecooker/commands.py#L230-L245
def create_initial_tree(channel): """ create_initial_tree: Create initial tree structure Args: channel (Channel): channel to construct Returns: tree manager to run rest of steps """ # Create channel manager with channel data config.LOGGER.info(" Setting up initial channel s...
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python
train
35.3125
djgagne/hagelslag
hagelslag/evaluation/NeighborEvaluator.py
https://github.com/djgagne/hagelslag/blob/6fb6c3df90bf4867e13a97d3460b14471d107df1/hagelslag/evaluation/NeighborEvaluator.py#L95-L114
def load_obs(self, mask_threshold=0.5): """ Loads observations and masking grid (if needed). Args: mask_threshold: Values greater than the threshold are kept, others are masked. """ print("Loading obs ", self.run_date, self.model_name, self.forecast_variable) ...
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python
train
56.95
watson-developer-cloud/python-sdk
ibm_watson/compare_comply_v1.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/compare_comply_v1.py#L3399-L3408
def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'cell_id') and self.cell_id is not None: _dict['cell_id'] = self.cell_id if hasattr(self, 'location') and self.location is not None: _dict['location'] = self.lo...
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python
train
44.7
senaite/senaite.core
bika/lims/browser/idserver/view.py
https://github.com/senaite/senaite.core/blob/7602ce2ea2f9e81eb34e20ce17b98a3e70713f85/bika/lims/browser/idserver/view.py#L93-L108
def get_next_id_for(self, key): """Get a preview of the next number """ portal_type = key.split("-")[0] config = get_config(None, portal_type=portal_type) id_template = config.get("form", "") number = self.storage.get(key) + 1 spec = { "seq": number, ...
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Get a preview of the next number
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python
train
37.25
Esri/ArcREST
src/arcrest/enrichment/_geoenrichment.py
https://github.com/Esri/ArcREST/blob/ab240fde2b0200f61d4a5f6df033516e53f2f416/src/arcrest/enrichment/_geoenrichment.py#L445-L546
def getVariables(self, sourceCountry, optionalCountryDataset=None, searchText=None): r""" The GeoEnrichment GetVariables helper method allows you to search the data collections for variables that contain specific keywords. T...
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r""" The GeoEnrichment GetVariables helper method allows you to search the data collections for variables that contain specific keywords. To see the comprehensive set of global Esri Demographics data that are available, use the interactive data browser: http://resources.arcgis.c...
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python
train
69.77451
infobloxopen/infoblox-netmri
infoblox_netmri/client.py
https://github.com/infobloxopen/infoblox-netmri/blob/e633bef1584101228b6d403df1de0d3d8e88d5c0/infoblox_netmri/client.py#L233-L245
def show(self, objtype, objid): """Query for a specific resource by ID Args: objtype (str): object type, e.g. 'device', 'interface' objid (int): object ID (DeviceID, etc.) Returns: A dict with that object Raises: requests.exceptions.HTTPEr...
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Query for a specific resource by ID Args: objtype (str): object type, e.g. 'device', 'interface' objid (int): object ID (DeviceID, etc.) Returns: A dict with that object Raises: requests.exceptions.HTTPError
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python
train
32.923077
duguyue100/minesweeper
minesweeper/gui.py
https://github.com/duguyue100/minesweeper/blob/38b1910f4c34d0275ac10a300285aba6f1d91d61/minesweeper/gui.py#L185-L222
def info_label(self, indicator): """Set info label by given settings. Parameters ---------- indicator : int A number where 0-8 is number of mines in srrounding. 12 is a mine field. """ if indicator in xrange(1, 9): self.id ...
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Set info label by given settings. Parameters ---------- indicator : int A number where 0-8 is number of mines in srrounding. 12 is a mine field.
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python
train
43.5
mapnik/Cascadenik
cascadenik/parse.py
https://github.com/mapnik/Cascadenik/blob/82f66859340a31dfcb24af127274f262d4f3ad85/cascadenik/parse.py#L498-L709
def parse_rule(tokens, variables, neighbors, parents, is_merc): """ Parse a rule set, return a list of declarations. Requires a dictionary of declared variables. Selectors in the neighbors list are simply grouped, and are generated from comma-delimited lists of selectors in the styl...
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Parse a rule set, return a list of declarations. Requires a dictionary of declared variables. Selectors in the neighbors list are simply grouped, and are generated from comma-delimited lists of selectors in the stylesheet. Selectors in the parents list should be combined with th...
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python
train
38.59434
fananimi/pyzk
zk/base.py
https://github.com/fananimi/pyzk/blob/1a765d616526efdcb4c9adfcc9b1d10f6ed8b938/zk/base.py#L753-L766
def poweroff(self): """ shutdown the machine """ command = const.CMD_POWEROFF command_string = b'' response_size = 1032 cmd_response = self.__send_command(command, command_string, response_size) if cmd_response.get('status'): self.is_connect = ...
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shutdown the machine
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python
train
30.857143
MacHu-GWU/pymongo_mate-project
pymongo_mate/query_builder.py
https://github.com/MacHu-GWU/pymongo_mate-project/blob/be53170c2db54cb705b9e548d32ef26c773ff7f3/pymongo_mate/query_builder.py#L123-L137
def startswith(text, ignore_case=True): """ Test if a string-field start with ``text``. Example:: filters = {"path": Text.startswith(r"C:\\")} """ if ignore_case: compiled = re.compile( "^%s" % text.replace("\\", "\\\\"), re.IGNORECASE) ...
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Test if a string-field start with ``text``. Example:: filters = {"path": Text.startswith(r"C:\\")}
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python
train
29.666667
sosy-lab/benchexec
benchexec/container.py
https://github.com/sosy-lab/benchexec/blob/44428f67f41384c03aea13e7e25f884764653617/benchexec/container.py#L324-L339
def forward_all_signals_async(target_pid, process_name): """Install all signal handler that forwards all signals to the given process.""" def forwarding_signal_handler(signum): _forward_signal(signum, process_name, forwarding_signal_handler.target_pid) # Somehow we get a Python SystemError sometime...
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Install all signal handler that forwards all signals to the given process.
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python
train
50.625
MisterWil/abodepy
abodepy/devices/lock.py
https://github.com/MisterWil/abodepy/blob/6f84bb428fd1da98855f55083cd427bebbcc57ae/abodepy/devices/lock.py#L10-L17
def lock(self): """Lock the device.""" success = self.set_status(CONST.STATUS_LOCKCLOSED_INT) if success: self._json_state['status'] = CONST.STATUS_LOCKCLOSED return success
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Lock the device.
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python
train
26.5
inveniosoftware-attic/invenio-utils
invenio_utils/text.py
https://github.com/inveniosoftware-attic/invenio-utils/blob/9a1c6db4e3f1370901f329f510480dd8df188296/invenio_utils/text.py#L435-L462
def nice_number(number, thousands_separator=',', max_ndigits_after_dot=None): """Return nicely printed number NUMBER in language LN. Return nicely printed number NUMBER in language LN using given THOUSANDS_SEPARATOR character. If max_ndigits_after_dot is specified and the number is float, the numbe...
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Return nicely printed number NUMBER in language LN. Return nicely printed number NUMBER in language LN using given THOUSANDS_SEPARATOR character. If max_ndigits_after_dot is specified and the number is float, the number is rounded by taking in consideration up to max_ndigits_after_dot digit after t...
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python
train
40.464286
rigetti/grove
grove/alpha/jordan_gradient/gradient_utils.py
https://github.com/rigetti/grove/blob/dc6bf6ec63e8c435fe52b1e00f707d5ce4cdb9b3/grove/alpha/jordan_gradient/gradient_utils.py#L6-L27
def binary_float_to_decimal_float(number: Union[float, str]) -> float: """ Convert binary floating point to decimal floating point. :param number: Binary floating point. :return: Decimal floating point representation of binary floating point. """ if isinstance(number, str): if number[0]...
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Convert binary floating point to decimal floating point. :param number: Binary floating point. :return: Decimal floating point representation of binary floating point.
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python
train
27.727273