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LudovicRousseau/pyscard
smartcard/wx/ReaderToolbar.py
https://github.com/LudovicRousseau/pyscard/blob/62e675028086c75656444cc21d563d9f08ebf8e7/smartcard/wx/ReaderToolbar.py#L45-L56
def update(self, observable, handlers): """Toolbar ReaderObserver callback that is notified when readers are added or removed.""" addedreaders, removedreaders = handlers for reader in addedreaders: item = self.Append(str(reader)) self.SetClientData(item, reader) ...
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Toolbar ReaderObserver callback that is notified when readers are added or removed.
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python
train
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maroba/findiff
findiff/coefs.py
https://github.com/maroba/findiff/blob/5d1ccfa966ce2bd556b4425583f8b9bbcbf183ac/findiff/coefs.py#L131-L136
def _build_rhs(p, q, deriv): """The right hand side of the equation system matrix""" b = [0 for _ in range(p+q+1)] b[deriv] = math.factorial(deriv) return np.array(b)
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The right hand side of the equation system matrix
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python
train
29.666667
orbingol/NURBS-Python
geomdl/_exchange.py
https://github.com/orbingol/NURBS-Python/blob/b1c6a8b51cf143ff58761438e93ba6baef470627/geomdl/_exchange.py#L102-L150
def import_surf_mesh(file_name): """ Generates a NURBS surface object from a mesh file. :param file_name: input mesh file :type file_name: str :return: a NURBS surface :rtype: NURBS.Surface """ raw_content = read_file(file_name) raw_content = raw_content.split("\n") content = [] ...
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python
train
32.428571
JdeRobot/base
src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py
https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/pymavlink/dialects/v10/matrixpilot.py#L9165-L9182
def attitude_quaternion_encode(self, time_boot_ms, q1, q2, q3, q4, rollspeed, pitchspeed, yawspeed): ''' The attitude in the aeronautical frame (right-handed, Z-down, X-front, Y-right), expressed as quaternion. Quaternion order is w, x, y, z and a zero rot...
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The attitude in the aeronautical frame (right-handed, Z-down, X-front, Y-right), expressed as quaternion. Quaternion order is w, x, y, z and a zero rotation would be expressed as (1 0 0 0). time_boot_ms : Timestamp (milliseconds since system ...
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python
train
68.444444
sbg/sevenbridges-python
sevenbridges/models/marker.py
https://github.com/sbg/sevenbridges-python/blob/f62640d1018d959f0b686f2dbe5e183085336607/sevenbridges/models/marker.py#L96-L117
def save(self, inplace=True): """ Saves all modification to the marker on the server. :param inplace Apply edits on the current instance or get a new one. :return: Marker instance. """ modified_data = self._modified_data() if bool(modified_data): extra...
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Saves all modification to the marker on the server. :param inplace Apply edits on the current instance or get a new one. :return: Marker instance.
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python
train
37.454545
ray-project/ray
python/ray/rllib/optimizers/multi_gpu_impl.py
https://github.com/ray-project/ray/blob/4eade036a0505e244c976f36aaa2d64386b5129b/python/ray/rllib/optimizers/multi_gpu_impl.py#L118-L225
def load_data(self, sess, inputs, state_inputs): """Bulk loads the specified inputs into device memory. The shape of the inputs must conform to the shapes of the input placeholders this optimizer was constructed with. The data is split equally across all the devices. If the data is not...
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python
train
44.305556
AASHE/django-constant-contact
django_constant_contact/models.py
https://github.com/AASHE/django-constant-contact/blob/2a37f00ee62531804414b35637d0dad5992d5822/django_constant_contact/models.py#L107-L162
def update_email_marketing_campaign(self, email_marketing_campaign, name, email_content, from_email, from_name, reply_to_email, subject, text_content, address, ...
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Update a Constant Contact email marketing campaign. Returns the updated EmailMarketingCampaign object.
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python
train
47.125
gwastro/pycbc-glue
pycbc_glue/ligolw/utils/process.py
https://github.com/gwastro/pycbc-glue/blob/a3e906bae59fbfd707c3ff82e5d008d939ec5e24/pycbc_glue/ligolw/utils/process.py#L185-L201
def get_process_params(xmldoc, program, param, require_unique_program = True): """ Return a list of the values stored in the process_params table for params named param for the program(s) named program. The values are returned as Python native types, not as the strings appearing in the XML document. If require_u...
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Return a list of the values stored in the process_params table for params named param for the program(s) named program. The values are returned as Python native types, not as the strings appearing in the XML document. If require_unique_program is True (default), then the document must contain exactly one program ...
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python
train
63.294118
CalebBell/thermo
thermo/volume.py
https://github.com/CalebBell/thermo/blob/3857ed023a3e64fd3039a32d53576c24990ef1c3/thermo/volume.py#L2360-L2378
def load_all_methods(self): r'''Method which picks out coefficients for the specified chemical from the various dictionaries and DataFrames storing it. All data is stored as attributes. This method also sets :obj:`Tmin`, :obj:`Tmax`, and :obj:`all_methods` as a set of methods for which t...
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r'''Method which picks out coefficients for the specified chemical from the various dictionaries and DataFrames storing it. All data is stored as attributes. This method also sets :obj:`Tmin`, :obj:`Tmax`, and :obj:`all_methods` as a set of methods for which the data exists for. Called ...
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python
valid
52
aewallin/allantools
examples/noise-color_and_PSD.py
https://github.com/aewallin/allantools/blob/b5c695a5af4379fcea4d4ce93a066cb902e7ee0a/examples/noise-color_and_PSD.py#L7-L18
def many_psds(k=2,fs=1.0, b0=1.0, N=1024): """ compute average of many PSDs """ psd=[] for j in range(k): print j x = noise.white(N=2*4096,b0=b0,fs=fs) f, tmp = noise.numpy_psd(x,fs) if j==0: psd = tmp else: psd = psd + tmp return f, psd/k
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compute average of many PSDs
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python
train
25.666667
Terrance/SkPy
skpy/conn.py
https://github.com/Terrance/SkPy/blob/0f9489c94e8ec4d3effab4314497428872a80ad1/skpy/conn.py#L877-L885
def ping(self, timeout=12): """ Send a keep-alive request for the endpoint. Args: timeout (int): maximum amount of time for the endpoint to stay active """ self.conn("POST", "{0}/users/ME/endpoints/{1}/active".format(self.conn.msgsHost, self.id), au...
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Send a keep-alive request for the endpoint. Args: timeout (int): maximum amount of time for the endpoint to stay active
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python
test
41.333333
iotile/coretools
iotilebuild/iotile/build/config/scons-local-3.0.1/SCons/Tool/jar.py
https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotilebuild/iotile/build/config/scons-local-3.0.1/SCons/Tool/jar.py#L80-L90
def jarFlags(target, source, env, for_signature): """If we have a manifest, make sure that the 'm' flag is specified.""" jarflags = env.subst('$JARFLAGS', target=target, source=source) for src in source: contents = src.get_text_contents() if contents[:16] == "Manifest-Version": ...
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If we have a manifest, make sure that the 'm' flag is specified.
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python
train
37.454545
stevelittlefish/littlefish
littlefish/colourutil.py
https://github.com/stevelittlefish/littlefish/blob/6deee7f81fab30716c743efe2e94e786c6e17016/littlefish/colourutil.py#L115-L143
def blend_html_colour_to_white(html_colour, alpha): """ :param html_colour: Colour string like FF552B or #334455 :param alpha: Alpha value :return: Html colour alpha blended onto white """ html_colour = html_colour.upper() has_hash = False if html_colour[0] == '#': has_hash = Tru...
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:param html_colour: Colour string like FF552B or #334455 :param alpha: Alpha value :return: Html colour alpha blended onto white
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python
test
25.103448
samjabrahams/anchorhub
anchorhub/builtin/github/writer.py
https://github.com/samjabrahams/anchorhub/blob/5ade359b08297d4003a5f477389c01de9e634b54/anchorhub/builtin/github/writer.py#L12-L44
def make_github_markdown_writer(opts): """ Creates a Writer object used for parsing and writing Markdown files with a GitHub style anchor transformation opts is a namespace object containing runtime options. It should generally include the following attributes: * 'open': a string correspondi...
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python
train
45.818182
ipfs/py-ipfs-api
ipfsapi/multipart.py
https://github.com/ipfs/py-ipfs-api/blob/7574dad04877b45dbe4ad321dcfa9e880eb2d90c/ipfsapi/multipart.py#L244-L265
def gen_chunks(self, gen): """Generates byte chunks of a given size. Takes a bytes generator and yields chunks of a maximum of ``chunk_size`` bytes. Parameters ---------- gen : generator The bytes generator that produces the bytes """ for dat...
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Generates byte chunks of a given size. Takes a bytes generator and yields chunks of a maximum of ``chunk_size`` bytes. Parameters ---------- gen : generator The bytes generator that produces the bytes
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python
train
30.090909
intuition-io/intuition
intuition/data/universe.py
https://github.com/intuition-io/intuition/blob/cd517e6b3b315a743eb4d0d0dc294e264ab913ce/intuition/data/universe.py#L44-L49
def _load_market_scheme(self): ''' Load market yaml description ''' try: self.scheme = yaml.load(open(self.scheme_path, 'r')) except Exception, error: raise LoadMarketSchemeFailed(reason=error)
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Load market yaml description
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python
train
39.333333
lehins/python-wepay
wepay/calls/checkout.py
https://github.com/lehins/python-wepay/blob/414d25a1a8d0ecb22a3ddd1f16c60b805bb52a1f/wepay/calls/checkout.py#L165-L187
def __capture(self, checkout_id, **kwargs): """Call documentation: `/checkout/capture <https://www.wepay.com/developer/reference/checkout#capture>`_, plus extra keyword parameters: :keyword str access_token: will be used instead of instance's ``access_token``, with ``...
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Call documentation: `/checkout/capture <https://www.wepay.com/developer/reference/checkout#capture>`_, plus extra keyword parameters: :keyword str access_token: will be used instead of instance's ``access_token``, with ``batch_mode=True`` will set `authorization` p...
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python
train
36.173913
3DLIRIOUS/MeshLabXML
meshlabxml/util.py
https://github.com/3DLIRIOUS/MeshLabXML/blob/177cce21e92baca500f56a932d66bd9a33257af8/meshlabxml/util.py#L90-L104
def make_list(var, num_terms=1): """ Make a variable a list if it is not already If variable is not a list it will make it a list of the correct length with all terms identical. """ if not isinstance(var, list): if isinstance(var, tuple): var = list(var) else: ...
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Make a variable a list if it is not already If variable is not a list it will make it a list of the correct length with all terms identical.
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python
test
28.933333
rkhleics/wagtailmenus
wagtailmenus/templatetags/menu_tags.py
https://github.com/rkhleics/wagtailmenus/blob/a41f240bed0d362e0d4dd4ef04a230f2b1827a93/wagtailmenus/templatetags/menu_tags.py#L84-L113
def section_menu( context, show_section_root=True, show_multiple_levels=True, apply_active_classes=True, allow_repeating_parents=True, max_levels=settings.DEFAULT_SECTION_MENU_MAX_LEVELS, template='', sub_menu_template='', sub_menu_templates=None, use_specific=settings.DEFAULT_SECTION_MENU_USE_SPECI...
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Render a section menu for the current section.
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python
train
40.766667
orbingol/NURBS-Python
geomdl/exchange.py
https://github.com/orbingol/NURBS-Python/blob/b1c6a8b51cf143ff58761438e93ba6baef470627/geomdl/exchange.py#L303-L336
def export_yaml(obj, file_name): """ Exports curves and surfaces in YAML format. .. note:: Requires `ruamel.yaml <https://pypi.org/project/ruamel.yaml/>`_ package. YAML format is also used by the `geomdl command-line application <https://github.com/orbingol/geomdl-cli>`_ as a way to input sha...
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Exports curves and surfaces in YAML format. .. note:: Requires `ruamel.yaml <https://pypi.org/project/ruamel.yaml/>`_ package. YAML format is also used by the `geomdl command-line application <https://github.com/orbingol/geomdl-cli>`_ as a way to input shape data from the command line. :para...
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python
train
35.117647
PyHDI/Pyverilog
pyverilog/vparser/parser.py
https://github.com/PyHDI/Pyverilog/blob/b852cc5ed6a7a2712e33639f9d9782d0d1587a53/pyverilog/vparser/parser.py#L2177-L2180
def p_single_statement_systemcall(self, p): 'single_statement : systemcall SEMICOLON' p[0] = SingleStatement(p[1], lineno=p.lineno(1)) p.set_lineno(0, p.lineno(1))
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single_statement : systemcall SEMICOLON
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python
train
46
StackStorm/pybind
pybind/slxos/v17s_1_02/routing_system/evpn_config/evpn/evpn_instance/vlan/__init__.py
https://github.com/StackStorm/pybind/blob/44c467e71b2b425be63867aba6e6fa28b2cfe7fb/pybind/slxos/v17s_1_02/routing_system/evpn_config/evpn/evpn_instance/vlan/__init__.py#L94-L115
def _set_vlan_add(self, v, load=False): """ Setter method for vlan_add, mapped from YANG variable /routing_system/evpn_config/evpn/evpn_instance/vlan/vlan_add (container) If this variable is read-only (config: false) in the source YANG file, then _set_vlan_add is considered as a private method. Back...
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Setter method for vlan_add, mapped from YANG variable /routing_system/evpn_config/evpn/evpn_instance/vlan/vlan_add (container) If this variable is read-only (config: false) in the source YANG file, then _set_vlan_add is considered as a private method. Backends looking to populate this variable should do...
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python
train
75.227273
chainer/chainerui
chainerui/tasks/collect_results.py
https://github.com/chainer/chainerui/blob/87ad25e875bc332bfdad20197fd3d0cb81a078e8/chainerui/tasks/collect_results.py#L32-L59
def collect_results(project, force=False): """collect_results.""" if not project.crawlable: return project now = datetime.datetime.now() if (now - project.updated_at).total_seconds() < 4 and (not force): return project result_paths = [] if os.path.isdir(project.path_name): ...
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collect_results.
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python
train
27.5
knipknap/SpiffWorkflow
SpiffWorkflow/util/weakmethod.py
https://github.com/knipknap/SpiffWorkflow/blob/f0af7f59a332e0619e4f3c00a7d4a3d230760e00/SpiffWorkflow/util/weakmethod.py#L117-L132
def ref(function, callback=None): """ Returns a weak reference to the given method or function. If the callback argument is not None, it is called as soon as the referenced function is garbage deleted. :type function: callable :param function: The function to reference. :type callback: ca...
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Returns a weak reference to the given method or function. If the callback argument is not None, it is called as soon as the referenced function is garbage deleted. :type function: callable :param function: The function to reference. :type callback: callable :param callback: Called when the fu...
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python
valid
33.25
apple/turicreate
src/external/xgboost/python-package/xgboost/core.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/src/external/xgboost/python-package/xgboost/core.py#L774-L824
def predict(self, data, output_margin=False, ntree_limit=0, pred_leaf=False): """ Predict with data. NOTE: This function is not thread safe. For each booster object, predict can only be called from one thread. If you want to run prediction using multiple thread, call...
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python
train
37.117647
ekzhu/datasketch
datasketch/lshforest.py
https://github.com/ekzhu/datasketch/blob/b3e4129987890a2beb04f2c0b6dc618ae35f2e14/datasketch/lshforest.py#L62-L68
def index(self): ''' Index all the keys added so far and make them searchable. ''' for i, hashtable in enumerate(self.hashtables): self.sorted_hashtables[i] = [H for H in hashtable.keys()] self.sorted_hashtables[i].sort()
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Index all the keys added so far and make them searchable.
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python
test
38.714286
DataBiosphere/dsub
dsub/providers/local.py
https://github.com/DataBiosphere/dsub/blob/443ce31daa6023dc2fd65ef2051796e19d18d5a7/dsub/providers/local.py#L641-L699
def _get_task_from_task_dir(self, job_id, user_id, task_id, task_attempt): """Return a Task object with this task's info.""" # We need to be very careful about how we read and interpret the contents # of the task directory. The directory could be changing because a new # task is being created. The dire...
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Return a Task object with this task's info.
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python
valid
35.949153
openego/eTraGo
etrago/tools/utilities.py
https://github.com/openego/eTraGo/blob/2a8fc6d4368d0e9abe6fe0d0c39baf66ea0126b9/etrago/tools/utilities.py#L57-L75
def buses_of_vlvl(network, voltage_level): """ Get bus-ids of given voltage level(s). Parameters ---------- network : :class:`pypsa.Network Overall container of PyPSA voltage_level: list Returns ------- list List containing bus-ids. """ mask = network.buses.v_n...
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Get bus-ids of given voltage level(s). Parameters ---------- network : :class:`pypsa.Network Overall container of PyPSA voltage_level: list Returns ------- list List containing bus-ids.
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python
train
19.684211
jrosebr1/imutils
imutils/convenience.py
https://github.com/jrosebr1/imutils/blob/4430083199793bd66db64e574379cbe18414d420/imutils/convenience.py#L304-L319
def adjust_brightness_contrast(image, brightness=0., contrast=0.): """ Adjust the brightness and/or contrast of an image :param image: OpenCV BGR image :param contrast: Float, contrast adjustment with 0 meaning no change :param brightness: Float, brightness adjustment with 0 meaning no change "...
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Adjust the brightness and/or contrast of an image :param image: OpenCV BGR image :param contrast: Float, contrast adjustment with 0 meaning no change :param brightness: Float, brightness adjustment with 0 meaning no change
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python
train
43.9375
cloudsmith-io/cloudsmith-cli
cloudsmith_cli/core/api/packages.py
https://github.com/cloudsmith-io/cloudsmith-cli/blob/5bc245ca5d0bfa85380be48e7c206b4c86cc6c8e/cloudsmith_cli/core/api/packages.py#L122-L142
def get_package_status(owner, repo, identifier): """Get the status for a package in a repository.""" client = get_packages_api() with catch_raise_api_exception(): data, _, headers = client.packages_status_with_http_info( owner=owner, repo=repo, identifier=identifier ) ratel...
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Get the status for a package in a repository.
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python
train
28.952381
saltstack/salt
salt/modules/kubernetesmod.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/kubernetesmod.py#L1467-L1510
def __read_and_render_yaml_file(source, template, saltenv): ''' Read a yaml file and, if needed, renders that using the specifieds templating. Returns the python objects defined inside of the file. ''' sfn = __salt__['cp.cache_file'](so...
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Read a yaml file and, if needed, renders that using the specifieds templating. Returns the python objects defined inside of the file.
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python
train
37.5
DataDog/integrations-core
openstack_controller/datadog_checks/openstack_controller/api.py
https://github.com/DataDog/integrations-core/blob/ebd41c873cf9f97a8c51bf9459bc6a7536af8acd/openstack_controller/datadog_checks/openstack_controller/api.py#L598-L623
def _get_valid_endpoint(resp, name, entry_type): """ Parse the service catalog returned by the Identity API for an endpoint matching the Nova service with the requested version Sends a CRITICAL service check when no viable candidates are found in the Catalog """ catalog =...
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Parse the service catalog returned by the Identity API for an endpoint matching the Nova service with the requested version Sends a CRITICAL service check when no viable candidates are found in the Catalog
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python
train
43.115385
todstoychev/signal-dispatcher
signal_dispatcher/signal_dispatcher.py
https://github.com/todstoychev/signal-dispatcher/blob/77131d119045973d65434abbcd6accdfa9cc327a/signal_dispatcher/signal_dispatcher.py#L75-L84
def signal_alias_exists(alias: str) -> bool: """ Checks if signal alias exists. :param alias: Signal alias. :return: """ if SignalDispatcher.signals.get(alias): return True return False
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Checks if signal alias exists. :param alias: Signal alias. :return:
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python
train
24.5
Neurita/boyle
boyle/nifti/storage.py
https://github.com/Neurita/boyle/blob/2dae7199849395a209c887d5f30506e1de8a9ad9/boyle/nifti/storage.py#L160-L176
def hdfpath_to_nifti1image(file_path, h5path): """Returns a nibabel Nifti1Image from a HDF5 group datasets Parameters ---------- file_path: string HDF5 file path h5path: HDF5 group path in file_path Returns ------- nibabel Nifti1Image """ with h5py.File(fil...
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Returns a nibabel Nifti1Image from a HDF5 group datasets Parameters ---------- file_path: string HDF5 file path h5path: HDF5 group path in file_path Returns ------- nibabel Nifti1Image
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python
valid
21.882353
ssalentin/plip
plip/plipcmd.py
https://github.com/ssalentin/plip/blob/906c8d36463689779b403f6c2c9ed06174acaf9a/plip/plipcmd.py#L131-L177
def main(inputstructs, inputpdbids): """Main function. Calls functions for processing, report generation and visualization.""" pdbid, pdbpath = None, None # #@todo For multiprocessing, implement better stacktracing for errors # Print title and version title = "* Protein-Ligand Interaction Profiler v...
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Main function. Calls functions for processing, report generation and visualization.
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python
train
52.148936
ros-infrastructure/ros_buildfarm
ros_buildfarm/status_page.py
https://github.com/ros-infrastructure/ros_buildfarm/blob/c63ad85b21470f3262086fcd987528a0efc0cf6d/ros_buildfarm/status_page.py#L489-L511
def get_jenkins_job_urls( rosdistro_name, jenkins_url, release_build_name, targets): """ Get the Jenkins job urls for each target. The placeholder {pkg} needs to be replaced with the ROS package name. :return: a dict indexed by targets containing a string """ urls = {} for target i...
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Get the Jenkins job urls for each target. The placeholder {pkg} needs to be replaced with the ROS package name. :return: a dict indexed by targets containing a string
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python
valid
37.652174
IEMLdev/ieml
ieml/distance/order.py
https://github.com/IEMLdev/ieml/blob/4c842ba7e6165e2f1b4a4e2e98759f9f33af5f25/ieml/distance/order.py#L25-L46
def count_id(w0): """ 0 -> no terms idd 1 -> most term idd are shared in root morphem 2 -> most term idd are shared in flexing morphem 3 -> most term idd are shared root <-> flexing (crossed) :param w0: :param w1: :return: """ def f(w1): count = [set(w0.root).intersectio...
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0 -> no terms idd 1 -> most term idd are shared in root morphem 2 -> most term idd are shared in flexing morphem 3 -> most term idd are shared root <-> flexing (crossed) :param w0: :param w1: :return:
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python
test
27.409091
craffel/mir_eval
mir_eval/melody.py
https://github.com/craffel/mir_eval/blob/f41c8dafaea04b411252a516d1965af43c7d531b/mir_eval/melody.py#L358-L426
def voicing_measures(ref_voicing, est_voicing): """Compute the voicing recall and false alarm rates given two voicing indicator sequences, one as reference (truth) and the other as the estimate (prediction). The sequences must be of the same length. Examples -------- >>> ref_time, ref_freq = m...
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Compute the voicing recall and false alarm rates given two voicing indicator sequences, one as reference (truth) and the other as the estimate (prediction). The sequences must be of the same length. Examples -------- >>> ref_time, ref_freq = mir_eval.io.load_time_series('ref.txt') >>> est_time...
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python
train
35.028986
PmagPy/PmagPy
pmagpy/builder2.py
https://github.com/PmagPy/PmagPy/blob/c7984f8809bf40fe112e53dcc311a33293b62d0b/pmagpy/builder2.py#L110-L119
def find_or_create_by_name(self, item_name, items_list, item_type): """ See if item with item_name exists in item_list. If not, create that item. Either way, return an item of type item_type. """ item = self.find_by_name(item_name, items_list) if not item: ...
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See if item with item_name exists in item_list. If not, create that item. Either way, return an item of type item_type.
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python
train
38.9
scott-griffiths/bitstring
bitstring.py
https://github.com/scott-griffiths/bitstring/blob/ab40ae7f0b43fe223a39b63cbc0529b09f3ef653/bitstring.py#L1472-L1477
def _readintbe(self, length, start): """Read bits and interpret as a big-endian signed int.""" if length % 8: raise InterpretError("Big-endian integers must be whole-byte. " "Length = {0} bits.", length) return self._readint(length, start)
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Read bits and interpret as a big-endian signed int.
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python
train
50.5
GNS3/gns3-server
gns3server/compute/dynamips/__init__.py
https://github.com/GNS3/gns3-server/blob/a221678448fb5d24e977ef562f81d56aacc89ab1/gns3server/compute/dynamips/__init__.py#L328-L395
def create_nio(self, node, nio_settings): """ Creates a new NIO. :param node: Dynamips node instance :param nio_settings: information to create the NIO :returns: a NIO object """ nio = None if nio_settings["type"] == "nio_udp": lport = nio_s...
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Creates a new NIO. :param node: Dynamips node instance :param nio_settings: information to create the NIO :returns: a NIO object
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python
train
50.294118
Galarzaa90/tibia.py
tibiapy/house.py
https://github.com/Galarzaa90/tibia.py/blob/02ba1a8f1e18177ef5c7dcd44affc8d761d59e12/tibiapy/house.py#L120-L171
def from_content(cls, content): """Parses a Tibia.com response into a House object. Parameters ---------- content: :class:`str` HTML content of the page. Returns ------- :class:`House` The house contained in the page, or None if the house...
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Parses a Tibia.com response into a House object. Parameters ---------- content: :class:`str` HTML content of the page. Returns ------- :class:`House` The house contained in the page, or None if the house doesn't exist. Raises ---...
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python
train
33.846154
trendels/rhino
rhino/mapper.py
https://github.com/trendels/rhino/blob/f1f0ef21b6080a2bd130b38b5bef163074c94aed/rhino/mapper.py#L629-L673
def path(self, target, args, kw): """Build a URL path fragment for a resource or route. Possible values for `target`: A string that does not start with a '.' and does not contain ':'. : Looks up the route of the same name on this mapper and returns it's path. A s...
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Build a URL path fragment for a resource or route. Possible values for `target`: A string that does not start with a '.' and does not contain ':'. : Looks up the route of the same name on this mapper and returns it's path. A string of the form 'a:b', 'a:b:c', etc. ...
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python
train
44.644444
south-coast-science/scs_core
src/scs_core/gas/pid_datum.py
https://github.com/south-coast-science/scs_core/blob/a4152b0bbed6acbbf257e1bba6a912f6ebe578e5/src/scs_core/gas/pid_datum.py#L44-L58
def __we_c(cls, calib, tc, temp, we_v): """ Compute weC from sensor temperature compensation of weV """ offset_v = calib.pid_elc_mv / 1000.0 response_v = we_v - offset_v # remove electronic zero response_c = tc.correct(temp, response_v) # correct the res...
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Compute weC from sensor temperature compensation of weV
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python
train
31.8
sentinel-hub/sentinelhub-py
sentinelhub/geometry.py
https://github.com/sentinel-hub/sentinelhub-py/blob/08a83b7f1e289187159a643336995d8369860fea/sentinelhub/geometry.py#L206-L212
def middle(self): """ Returns the middle point of the bounding box :return: middle point :rtype: (float, float) """ return (self.min_x + self.max_x) / 2, (self.min_y + self.max_y) / 2
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Returns the middle point of the bounding box :return: middle point :rtype: (float, float)
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python
train
31.142857
nagius/snmp_passpersist
snmp_passpersist.py
https://github.com/nagius/snmp_passpersist/blob/8cc584d2e90c920ae98a318164a55bde209a18f7/snmp_passpersist.py#L222-L224
def add_ip(self,oid,value,label=None): """Short helper to add an IP address value to the MIB subtree.""" self.add_oid_entry(oid,'IPADDRESS',value,label=label)
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Short helper to add an IP address value to the MIB subtree.
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python
train
53.333333
ksbg/sparklanes
sparklanes/_submit/submit.py
https://github.com/ksbg/sparklanes/blob/62e70892e6ae025be2f4c419f4afc34714d6884c/sparklanes/_submit/submit.py#L127-L155
def __validate_and_fix_spark_args(spark_args): """ Prepares spark arguments. In the command-line script, they are passed as for example `-s master=local[4] deploy-mode=client verbose`, which would be passed to spark-submit as `--master local[4] --deploy-mode client --verbose` Parameters -------...
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Prepares spark arguments. In the command-line script, they are passed as for example `-s master=local[4] deploy-mode=client verbose`, which would be passed to spark-submit as `--master local[4] --deploy-mode client --verbose` Parameters ---------- spark_args (List): List of spark arguments Ret...
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python
train
38.655172
mitsei/dlkit
dlkit/json_/authorization/queries.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/authorization/queries.py#L230-L240
def match_agent_id(self, agent_id, match): """Matches the agent identified by the given ``Id``. arg: agent_id (osid.id.Id): the Id of the ``Agent`` arg: match (boolean): ``true`` if a positive match, ``false`` for a negative match raise: NullArgument - ``agent_id`...
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Matches the agent identified by the given ``Id``. arg: agent_id (osid.id.Id): the Id of the ``Agent`` arg: match (boolean): ``true`` if a positive match, ``false`` for a negative match raise: NullArgument - ``agent_id`` is ``null`` *compliance: mandatory -- This m...
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python
train
42.454545
brandjon/simplestruct
simplestruct/type.py
https://github.com/brandjon/simplestruct/blob/f2bba77278838b5904fd72b35741da162f337c37/simplestruct/type.py#L61-L106
def checktype_seq(self, seq, kind, *, unique=False, **kargs): """Raise TypeError if seq is not a sequence of elements satisfying kind. Optionally require elements to be unique. As a special case, a string is considered to be an atomic value rather than a sequence of single-chara...
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Raise TypeError if seq is not a sequence of elements satisfying kind. Optionally require elements to be unique. As a special case, a string is considered to be an atomic value rather than a sequence of single-character strings. (Thus, checktype_seq('foo', str) will fail.)
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python
train
43.304348
aliyun/aliyun-log-python-sdk
aliyun/log/logclient_operator.py
https://github.com/aliyun/aliyun-log-python-sdk/blob/ac383db0a16abf1e5ef7df36074374184b43516e/aliyun/log/logclient_operator.py#L780-L889
def transform_data(from_client, from_project, from_logstore, from_time, to_time=None, to_client=None, to_project=None, to_logstore=None, shard_list=None, config=None, batch_size=None, compress=None, cg_name...
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transform data from one logstore to another one (could be the same or in different region), the time is log received time on server side.
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python
train
48.818182
hanguokai/youku
youku/youku_videos.py
https://github.com/hanguokai/youku/blob/b2df060c7dccfad990bcfa289fff68bb77d1e69b/youku/youku_videos.py#L21-L31
def find_video_by_id(self, video_id): """doc: http://open.youku.com/docs/doc?id=44 """ url = 'https://openapi.youku.com/v2/videos/show_basic.json' params = { 'client_id': self.client_id, 'video_id': video_id } r = requests.get(url, params=params) ...
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doc: http://open.youku.com/docs/doc?id=44
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python
train
32.272727
markovmodel/msmtools
msmtools/analysis/sparse/committor.py
https://github.com/markovmodel/msmtools/blob/54dc76dd2113a0e8f3d15d5316abab41402941be/msmtools/analysis/sparse/committor.py#L104-L175
def backward_committor(T, A, B): r"""Backward committor between given sets. The backward committor u(x) between sets A and B is the probability for the chain starting in x to have come from A last rather than from B. Parameters ---------- T : (M, M) ndarray Transition matrix A ...
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r"""Backward committor between given sets. The backward committor u(x) between sets A and B is the probability for the chain starting in x to have come from A last rather than from B. Parameters ---------- T : (M, M) ndarray Transition matrix A : array_like List of integer ...
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python
train
25.305556
litl/rauth
rauth/service.py
https://github.com/litl/rauth/blob/a6d887d7737cf21ec896a8104f25c2754c694011/rauth/service.py#L261-L292
def get_raw_access_token(self, request_token, request_token_secret, method='GET', **kwargs): ''' Returns a Requests' response over the :attr:`rauth.OAuth1Service.access_token_url`....
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Returns a Requests' response over the :attr:`rauth.OAuth1Service.access_token_url`. Use this if your endpoint if you need the full `Response` object. :param request_token: The request token as returned by :meth:`get_request_token`. :type request_token: str :param re...
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python
train
42.84375
googlemaps/google-maps-services-python
googlemaps/places.py
https://github.com/googlemaps/google-maps-services-python/blob/7ed40b4d8df63479794c46ce29d03ed6083071d7/googlemaps/places.py#L175-L249
def places_nearby(client, location=None, radius=None, keyword=None, language=None, min_price=None, max_price=None, name=None, open_now=False, rank_by=None, type=None, page_token=None): """ Performs nearby search for places. :param location: The latitude/longitude value f...
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Performs nearby search for places. :param location: The latitude/longitude value for which you wish to obtain the closest, human-readable address. :type location: string, dict, list, or tuple :param radius: Distance in meters within which to bias results. :type radius: int :p...
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python
train
43.44
tus/tus-py-client
tusclient/uploader.py
https://github.com/tus/tus-py-client/blob/0e5856efcfae6fc281171359ce38488a70468993/tusclient/uploader.py#L274-L292
def upload(self, stop_at=None): """ Perform file upload. Performs continous upload of chunks of the file. The size uploaded at each cycle is the value of the attribute 'chunk_size'. :Args: - stop_at (Optional[int]): Determines at what offset value th...
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Perform file upload. Performs continous upload of chunks of the file. The size uploaded at each cycle is the value of the attribute 'chunk_size'. :Args: - stop_at (Optional[int]): Determines at what offset value the upload should stop. If not specified this ...
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python
train
35.473684
PaulHancock/Aegean
AegeanTools/catalogs.py
https://github.com/PaulHancock/Aegean/blob/185d2b4a51b48441a1df747efc9a5271c79399fd/AegeanTools/catalogs.py#L714-L782
def writeDB(filename, catalog, meta=None): """ Output an sqlite3 database containing one table for each source type Parameters ---------- filename : str Output filename catalog : list List of sources of type :class:`AegeanTools.models.OutputSource`, :class:`AegeanTools....
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Output an sqlite3 database containing one table for each source type Parameters ---------- filename : str Output filename catalog : list List of sources of type :class:`AegeanTools.models.OutputSource`, :class:`AegeanTools.models.SimpleSource`, or :class:`AegeanTools.models.Isl...
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python
train
37.57971
henzk/django-productline
django_productline/features/staticfiles/urls.py
https://github.com/henzk/django-productline/blob/24ff156924c1a8c07b99cbb8a1de0a42b8d81f60/django_productline/features/staticfiles/urls.py#L4-L26
def refine_get_urls(original): """ serve static files (and media files also) in production the webserver should serve requested static files itself and never let requests to /static/* and /media/* get to the django application. """ def get_urls(): from django.conf.urls import url ...
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serve static files (and media files also) in production the webserver should serve requested static files itself and never let requests to /static/* and /media/* get to the django application.
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python
train
32.956522
apache/incubator-heron
heron/instance/src/python/instance/st_heron_instance.py
https://github.com/apache/incubator-heron/blob/ad10325a0febe89ad337e561ebcbe37ec5d9a5ac/heron/instance/src/python/instance/st_heron_instance.py#L118-L142
def handle_new_tuple_set_2(self, hts2): """Called when new HeronTupleSet2 arrives Convert(Assemble) HeronTupleSet2(raw byte array) to HeronTupleSet See more at GitHub PR #1421 :param tuple_msg_set: HeronTupleSet2 type """ if self.my_pplan_helper is None or self.my_instance is None: L...
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Called when new HeronTupleSet2 arrives Convert(Assemble) HeronTupleSet2(raw byte array) to HeronTupleSet See more at GitHub PR #1421 :param tuple_msg_set: HeronTupleSet2 type
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python
valid
39.64
glue-viz/glue-vispy-viewers
glue_vispy_viewers/extern/vispy/ext/ipy_inputhook.py
https://github.com/glue-viz/glue-vispy-viewers/blob/54a4351d98c1f90dfb1a557d1b447c1f57470eea/glue_vispy_viewers/extern/vispy/ext/ipy_inputhook.py#L138-L152
def set_inputhook(self, callback): """Set PyOS_InputHook to callback and return the previous one.""" # On platforms with 'readline' support, it's all too likely to # have a KeyboardInterrupt signal delivered *even before* an # initial ``try:`` clause in the callback can be executed, so ...
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python
train
49.933333
prompt-toolkit/pymux
pymux/key_bindings.py
https://github.com/prompt-toolkit/pymux/blob/3f66e62b9de4b2251c7f9afad6c516dc5a30ec67/pymux/key_bindings.py#L85-L195
def _load_builtins(self): """ Fill the Registry with the hard coded key bindings. """ pymux = self.pymux kb = KeyBindings() # Create filters. has_prefix = HasPrefix(pymux) waits_for_confirmation = WaitsForConfirmation(pymux) prompt_or_command_focu...
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Fill the Registry with the hard coded key bindings.
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python
train
37.288288
neithere/monk
monk/manipulation.py
https://github.com/neithere/monk/blob/4b2ee5152b081ac288ce8568422a027b5e7d2b1c/monk/manipulation.py#L108-L139
def normalize_list_of_dicts(value, default_key, default_value=UNDEFINED): """ Converts given value to a list of dictionaries as follows: * ``[{...}]`` → ``[{...}]`` * ``{...}`` → ``[{...}]`` * ``'xyz'`` → ``[{default_key: 'xyz'}]`` * ``None`` → ``[{default_key: default_value}]`` (if spe...
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python
train
29.28125
SCIP-Interfaces/PySCIPOpt
examples/unfinished/tsptw.py
https://github.com/SCIP-Interfaces/PySCIPOpt/blob/9c960b40d94a48b0304d73dbe28b467b9c065abe/examples/unfinished/tsptw.py#L52-L92
def mtz2tw(n,c,e,l): """mtz: model for the traveling salesman problem with time windows (based on Miller-Tucker-Zemlin's one-index potential formulation, stronger constraints) Parameters: - n: number of nodes - c[i,j]: cost for traversing arc (i,j) - e[i]: earliest date for visiting ...
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mtz: model for the traveling salesman problem with time windows (based on Miller-Tucker-Zemlin's one-index potential formulation, stronger constraints) Parameters: - n: number of nodes - c[i,j]: cost for traversing arc (i,j) - e[i]: earliest date for visiting node i - l[i]: lates...
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python
train
40
googleapis/gax-python
google/gax/errors.py
https://github.com/googleapis/gax-python/blob/309aedfcfd48e4c8fa22dd60e9c84c3cc71bb20e/google/gax/errors.py#L73-L90
def create_error(msg, cause=None): """Creates a ``GaxError`` or subclass. Attributes: msg (string): describes the error that occurred. cause (Exception, optional): the exception raised by a lower layer of the RPC stack (for example, gRPC) that caused this exception, or N...
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Creates a ``GaxError`` or subclass. Attributes: msg (string): describes the error that occurred. cause (Exception, optional): the exception raised by a lower layer of the RPC stack (for example, gRPC) that caused this exception, or None if this exception originated in GAX. ...
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python
train
37.333333
iotile/coretools
iotilecore/iotile/core/utilities/intelhex/__init__.py
https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotilecore/iotile/core/utilities/intelhex/__init__.py#L1071-L1096
def bin2hex(fin, fout, offset=0): """Simple bin-to-hex convertor. @return 0 if all OK @param fin input bin file (filename or file-like object) @param fout output hex file (filename or file-like object) @param offset starting address offset for loading bin """ h = IntelHex()...
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Simple bin-to-hex convertor. @return 0 if all OK @param fin input bin file (filename or file-like object) @param fout output hex file (filename or file-like object) @param offset starting address offset for loading bin
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python
train
28.615385
explosion/thinc
examples/text-pair/glove_mwe_multipool_siamese.py
https://github.com/explosion/thinc/blob/90129be5f0d6c665344245a7c37dbe1b8afceea2/examples/text-pair/glove_mwe_multipool_siamese.py#L46-L64
def track_progress(**context): """Print training progress. Called after each epoch.""" model = context["model"] train_X = context["train_X"] dev_X = context["dev_X"] dev_y = context["dev_y"] n_train = len(train_X) trainer = context["trainer"] def each_epoch(): global epoch_train...
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Print training progress. Called after each epoch.
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python
train
33.947368
opencobra/memote
memote/utils.py
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L71-L130
def annotate(title, format_type, message=None, data=None, metric=1.0): """ Annotate a test case with info that should be displayed in the reports. Parameters ---------- title : str A human-readable descriptive title of the test case. format_type : str A string that determines ho...
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Annotate a test case with info that should be displayed in the reports. Parameters ---------- title : str A human-readable descriptive title of the test case. format_type : str A string that determines how the result data is formatted in the report. It is expected not to be None...
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python
train
38
nickmilon/Hellas
Hellas/Athens.py
https://github.com/nickmilon/Hellas/blob/542e4778692fbec90753942946f20100412ec9ee/Hellas/Athens.py#L37-L66
def haversine(lon1, lat1, lon2, lat2, earth_radius=6357000): """Calculate the great circle distance between two points on earth in Kilometers on the earth (specified in decimal degrees) .. seealso:: :func:`distance_points` :param float lon1: longitude of first place (decimal degrees) :param float ...
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Calculate the great circle distance between two points on earth in Kilometers on the earth (specified in decimal degrees) .. seealso:: :func:`distance_points` :param float lon1: longitude of first place (decimal degrees) :param float lat1: latitude of first place (decimal degrees) :param float lon...
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python
train
45.3
knagra/farnsworth
threads/views.py
https://github.com/knagra/farnsworth/blob/1b6589f0d9fea154f0a1e2231ed906764ed26d26/threads/views.py#L193-L216
def list_user_threads_view(request, targetUsername): ''' View of threads a user has created. ''' targetUser = get_object_or_404(User, username=targetUsername) targetProfile = get_object_or_404(UserProfile, user=targetUser) threads = Thread.objects.filter(owner=targetProfile) page_name = "{0}'s Threa...
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View of threads a user has created.
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python
train
43.916667
simpleai-team/simpleai
simpleai/search/local.py
https://github.com/simpleai-team/simpleai/blob/2836befa7e970013f62e0ee75562652aacac6f65/simpleai/search/local.py#L21-L38
def beam(problem, beam_size=100, iterations_limit=0, viewer=None): ''' Beam search. beam_size is the size of the beam. If iterations_limit is specified, the algorithm will end after that number of iterations. Else, it will continue until it can't find a better node than the current one. Req...
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Beam search. beam_size is the size of the beam. If iterations_limit is specified, the algorithm will end after that number of iterations. Else, it will continue until it can't find a better node than the current one. Requires: SearchProblem.actions, SearchProblem.result, SearchProblem.value, an...
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python
train
42.722222
waqasbhatti/astrobase
astrobase/timeutils.py
https://github.com/waqasbhatti/astrobase/blob/2922a14619d183fb28005fa7d02027ac436f2265/astrobase/timeutils.py#L294-L388
def get_epochs_given_midtimes_and_period( t_mid, period, err_t_mid=None, t0_fixed=None, t0_percentile=None, verbose=False ): '''This calculates the future epochs for a transit, given a period and a starting epoch The equation used is:: t_mid = period...
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This calculates the future epochs for a transit, given a period and a starting epoch The equation used is:: t_mid = period*epoch + t0 Default behavior if no kwargs are used is to define `t0` as the median finite time of the passed `t_mid` array. Only one of `err_t_mid` or `t0_fixed` shou...
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python
valid
33.2
pappasam/latexbuild
latexbuild/__init__.py
https://github.com/pappasam/latexbuild/blob/596a2a0a4c42eaa5eb9503d64f9073ad5d0640d5/latexbuild/__init__.py#L40-L56
def build_html(path_jinja2, template_name, path_outfile, template_kwargs=None): '''Helper function for building an html from a latex jinja2 template :param path_jinja2: the root directory for latex jinja2 templates :param template_name: the relative path, to path_jinja2, to the desired jinja2 Latex...
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Helper function for building an html from a latex jinja2 template :param path_jinja2: the root directory for latex jinja2 templates :param template_name: the relative path, to path_jinja2, to the desired jinja2 Latex template :param path_outfile: the full path to the desired final output file ...
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python
train
46.117647
inveniosoftware/kwalitee
kwalitee/hooks.py
https://github.com/inveniosoftware/kwalitee/blob/9124f8f55b15547fef08c6c43cabced314e70674/kwalitee/hooks.py#L285-L306
def run(command, raw_output=False): """Run a command using subprocess. :param command: command line to be run :type command: str :param raw_output: does not attempt to convert the output as unicode :type raw_output: bool :return: error code, output (``stdout``) and error (``stderr``) :rtype...
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Run a command using subprocess. :param command: command line to be run :type command: str :param raw_output: does not attempt to convert the output as unicode :type raw_output: bool :return: error code, output (``stdout``) and error (``stderr``) :rtype: tuple
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python
train
34.318182
annayqho/TheCannon
TheCannon/normalization.py
https://github.com/annayqho/TheCannon/blob/8010a0a5dc9a3f9bb91efa79d7756f79b3c7ba9a/TheCannon/normalization.py#L380-L398
def _cont_norm_running_quantile_regions(wl, fluxes, ivars, q, delta_lambda, ranges, verbose=True): """ Perform continuum normalization using running quantile, for spectrum that comes in chunks """ print("contnorm.py: continuum norm using running quantile") pri...
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Perform continuum normalization using running quantile, for spectrum that comes in chunks
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python
train
42.736842
carlosp420/dataset-creator
dataset_creator/utils.py
https://github.com/carlosp420/dataset-creator/blob/ea27340b145cb566a36c1836ff42263f1b2003a0/dataset_creator/utils.py#L59-L72
def convert_nexus_to_format(dataset_as_nexus, dataset_format): """ Converts nexus format to Phylip and Fasta using Biopython tools. :param dataset_as_nexus: :param dataset_format: :return: """ fake_handle = StringIO(dataset_as_nexus) nexus_al = AlignIO.parse(fake_handle, 'nexus') tm...
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Converts nexus format to Phylip and Fasta using Biopython tools. :param dataset_as_nexus: :param dataset_format: :return:
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python
train
34.142857
boriel/zxbasic
zxbparser.py
https://github.com/boriel/zxbasic/blob/23b28db10e41117805bdb3c0f78543590853b132/zxbparser.py#L912-L917
def p_statement_draw_attr(p): """ statement : DRAW attr_list expr COMMA expr """ p[0] = make_sentence('DRAW', make_typecast(TYPE.integer, p[3], p.lineno(4)), make_typecast(TYPE.integer, p[5], p.lineno(4)), p[2])
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statement : DRAW attr_list expr COMMA expr
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python
train
44.666667
obulpathi/cdn-fastly-python
fastly/__init__.py
https://github.com/obulpathi/cdn-fastly-python/blob/db2564b047e8af4bce72c3b88d6c27d3d0291425/fastly/__init__.py#L286-L294
def content_edge_check(self, url): """Retrieve headers and MD5 hash of the content for a particular url from each Fastly edge server.""" prefixes = ["http://", "https://"] for prefix in prefixes: if url.startswith(prefix): url = url[len(prefix):] break content = self._fetch("/content/edge_check/%s" %...
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Retrieve headers and MD5 hash of the content for a particular url from each Fastly edge server.
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python
train
37.111111
bitprophet/ssh
ssh/transport.py
https://github.com/bitprophet/ssh/blob/e8bdad4c82a50158a749233dca58c29e47c60b76/ssh/transport.py#L1466-L1482
def _compute_key(self, id, nbytes): "id is 'A' - 'F' for the various keys used by ssh" m = Message() m.add_mpint(self.K) m.add_bytes(self.H) m.add_byte(id) m.add_bytes(self.session_id) out = sofar = SHA.new(str(m)).digest() while len(out) < nbytes: ...
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id is 'A' - 'F' for the various keys used by ssh
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python
train
32.058824
GoogleCloudPlatform/appengine-mapreduce
python/src/mapreduce/namespace_range.py
https://github.com/GoogleCloudPlatform/appengine-mapreduce/blob/2045eb3605b6ecb40c83d11dd5442a89fe5c5dd6/python/src/mapreduce/namespace_range.py#L283-L303
def make_datastore_query(self, cursor=None): """Returns a datastore.Query that generates all namespaces in the range. Args: cursor: start cursor for the query. Returns: A datastore.Query instance that generates db.Keys for each namespace in the NamespaceRange. """ filters = {} ...
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Returns a datastore.Query that generates all namespaces in the range. Args: cursor: start cursor for the query. Returns: A datastore.Query instance that generates db.Keys for each namespace in the NamespaceRange.
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python
train
32.809524
mottosso/be
be/vendor/requests/packages/urllib3/util/retry.py
https://github.com/mottosso/be/blob/0f3d4f3597c71223f616d78c6d9b2c8dffcd8a71/be/vendor/requests/packages/urllib3/util/retry.py#L158-L167
def get_backoff_time(self): """ Formula for computing the current backoff :rtype: float """ if self._observed_errors <= 1: return 0 backoff_value = self.backoff_factor * (2 ** (self._observed_errors - 1)) return min(self.BACKOFF_MAX, backoff_value)
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Formula for computing the current backoff :rtype: float
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python
train
30.1
numenta/htmresearch
htmresearch/frameworks/layers/physical_objects.py
https://github.com/numenta/htmresearch/blob/70c096b09a577ea0432c3f3bfff4442d4871b7aa/htmresearch/frameworks/layers/physical_objects.py#L316-L337
def plot(self, numPoints=100): """ Specific plotting method for cylinders. """ fig = plt.figure() ax = fig.add_subplot(111, projection='3d') # generate cylinder x = np.linspace(- self.radius, self.radius, numPoints) z = np.linspace(- self.height / 2., self.height / 2., numPoints) Xc...
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Specific plotting method for cylinders.
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python
train
28.954545
LISE-B26/pylabcontrol
build/lib/pylabcontrol/src/instruments/instrument_dummy.py
https://github.com/LISE-B26/pylabcontrol/blob/67482e5157fcd1c40705e5c2cacfb93564703ed0/build/lib/pylabcontrol/src/instruments/instrument_dummy.py#L139-L159
def run(self): """ this is the actual execution of the instrument thread: continuously read values from the probes """ eta = self.settings['noise_strength'] gamma = 2 * np.pi * self.settings['noise_bandwidth'] dt = 1. / self.settings['update frequency'] control =...
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this is the actual execution of the instrument thread: continuously read values from the probes
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python
train
32.142857
AshleySetter/optoanalysis
optoanalysis/optoanalysis/optoanalysis.py
https://github.com/AshleySetter/optoanalysis/blob/9d390acc834d70024d47b574aea14189a5a5714e/optoanalysis/optoanalysis/optoanalysis.py#L4233-L4278
def get_wigner(z, freq, sample_freq, histbins=200, show_plot=False): """ Calculates an approximation to the wigner quasi-probability distribution by splitting the z position array into slices of the length of one period of the motion. This slice is then associated with phase from -180 to 180 degrees...
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Calculates an approximation to the wigner quasi-probability distribution by splitting the z position array into slices of the length of one period of the motion. This slice is then associated with phase from -180 to 180 degrees. These slices are then histogramed in order to get a distribution of counts ...
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python
train
36.891304
lawsie/guizero
guizero/event.py
https://github.com/lawsie/guizero/blob/84c7f0b314fa86f9fc88eb11c9a0f6c4b57155e2/guizero/event.py#L177-L190
def set_event(self, ref, tk_event, callback): """ Sets a callback for this widget against a ref (reference) for a tk_event, setting the callback to None will remove it. """ # has an EventCallback been created for this tk event if tk_event not in self._event_callbacks: ...
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Sets a callback for this widget against a ref (reference) for a tk_event, setting the callback to None will remove it.
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python
train
42.071429
spotify/luigi
luigi/contrib/s3.py
https://github.com/spotify/luigi/blob/c5eca1c3c3ee2a7eb612486192a0da146710a1e9/luigi/contrib/s3.py#L177-L195
def exists(self, path): """ Does provided path exist on S3? """ (bucket, key) = self._path_to_bucket_and_key(path) # root always exists if self._is_root(key): return True # file if self._exists(bucket, key): return True i...
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Does provided path exist on S3?
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python
train
22.105263
hvac/hvac
hvac/api/system_backend/key.py
https://github.com/hvac/hvac/blob/cce5b86889193f622c2a72a4a1b7e1c9c8aff1ce/hvac/api/system_backend/key.py#L7-L20
def read_root_generation_progress(self): """Read the configuration and process of the current root generation attempt. Supported methods: GET: /sys/generate-root/attempt. Produces: 200 application/json :return: The JSON response of the request. :rtype: dict """ ...
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Read the configuration and process of the current root generation attempt. Supported methods: GET: /sys/generate-root/attempt. Produces: 200 application/json :return: The JSON response of the request. :rtype: dict
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python
train
32.714286
klmitch/turnstile
turnstile/control.py
https://github.com/klmitch/turnstile/blob/8fe9a359b45e505d3192ab193ecf9be177ab1a17/turnstile/control.py#L82-L98
def get_limits(self, limit_sum=None): """ Gets the current limit data if it is different from the data indicated by limit_sum. The db argument is used for hydrating the limit objects. Raises a NoChangeException if the limit_sum represents no change, otherwise returns a tuple ...
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Gets the current limit data if it is different from the data indicated by limit_sum. The db argument is used for hydrating the limit objects. Raises a NoChangeException if the limit_sum represents no change, otherwise returns a tuple consisting of the current limit_sum and a list of Li...
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python
train
39
connectordb/connectordb-python
connectordb/_connection.py
https://github.com/connectordb/connectordb-python/blob/2092b0cb30898139a247176bcf433d5a4abde7cb/connectordb/_connection.py#L117-L121
def ping(self): """Attempts to ping the server using current credentials, and responds with the path of the currently authenticated device""" return self.handleresult(self.r.get(self.url, params={"q": "this"})).text
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Attempts to ping the server using current credentials, and responds with the path of the currently authenticated device
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python
test
55.8
iotile/coretools
iotilegateway/iotilegateway/device.py
https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotilegateway/iotilegateway/device.py#L110-L120
def get_config(self, name, default=_MISSING): """Get a configuration setting from this DeviceAdapter. See :meth:`AbstractDeviceAdapter.get_config`. """ val = self._config.get(name, default) if val is _MISSING: raise ArgumentError("DeviceAdapter config {} did not exi...
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Get a configuration setting from this DeviceAdapter. See :meth:`AbstractDeviceAdapter.get_config`.
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python
train
32.909091
quantumlib/Cirq
cirq/google/sim/xmon_stepper.py
https://github.com/quantumlib/Cirq/blob/0827da80dd7880e5b923eb69407e980ed9bc0bd2/cirq/google/sim/xmon_stepper.py#L304-L339
def simulate_w(self, index: int, half_turns: float, axis_half_turns: float): """Simulate a single qubit rotation gate about a X + b Y. The gate simulated is U = exp(-i pi/2 W half_turns) where W = cos(pi axis_half_turns) X + sin(pi ax...
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Simulate a single qubit rotation gate about a X + b Y. The gate simulated is U = exp(-i pi/2 W half_turns) where W = cos(pi axis_half_turns) X + sin(pi axis_half_turns) Y Args: index: The qubit to act on. half_turns: The amount of the overall rotation, see the formula ...
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python
train
36.277778
ray-project/ray
python/ray/rllib/agents/dqn/dqn_policy_graph.py
https://github.com/ray-project/ray/blob/4eade036a0505e244c976f36aaa2d64386b5129b/python/ray/rllib/agents/dqn/dqn_policy_graph.py#L679-L700
def _scope_vars(scope, trainable_only=False): """ Get variables inside a scope The scope can be specified as a string Parameters ---------- scope: str or VariableScope scope in which the variables reside. trainable_only: bool whether or not to return only the variables that were...
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Get variables inside a scope The scope can be specified as a string Parameters ---------- scope: str or VariableScope scope in which the variables reside. trainable_only: bool whether or not to return only the variables that were marked as trainable. Returns ------- v...
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python
train
27.636364
ga4gh/ga4gh-server
ga4gh/server/datamodel/__init__.py
https://github.com/ga4gh/ga4gh-server/blob/1aa18922ef136db8604f6f098cb1732cba6f2a76/ga4gh/server/datamodel/__init__.py#L68-L90
def getFileHandle(self, dataFile, openMethod): """ Returns handle associated to the filename. If the file is already opened, update its priority in the cache and return its handle. Otherwise, open the file using openMethod, store it in the cache and return the corresponding handl...
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Returns handle associated to the filename. If the file is already opened, update its priority in the cache and return its handle. Otherwise, open the file using openMethod, store it in the cache and return the corresponding handle.
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python
train
39.391304
tanghaibao/jcvi
jcvi/formats/fastq.py
https://github.com/tanghaibao/jcvi/blob/d2e31a77b6ade7f41f3b321febc2b4744d1cdeca/jcvi/formats/fastq.py#L238-L267
def uniq(args): """ %prog uniq fastqfile Retain only first instance of duplicate reads. Duplicate is defined as having the same read name. """ p = OptionParser(uniq.__doc__) p.set_outfile() opts, args = p.parse_args(args) if len(args) != 1: sys.exit(not p.print_help()) ...
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%prog uniq fastqfile Retain only first instance of duplicate reads. Duplicate is defined as having the same read name.
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python
train
25.066667
cjdrake/pyeda
pyeda/boolalg/expr.py
https://github.com/cjdrake/pyeda/blob/554ee53aa678f4b61bcd7e07ba2c74ddc749d665/pyeda/boolalg/expr.py#L242-L245
def expr2dimacscnf(ex): """Convert an expression into an equivalent DIMACS CNF.""" litmap, nvars, clauses = ex.encode_cnf() return litmap, DimacsCNF(nvars, clauses)
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Convert an expression into an equivalent DIMACS CNF.
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python
train
43.25
jtwhite79/pyemu
pyemu/utils/helpers.py
https://github.com/jtwhite79/pyemu/blob/c504d8e7a4097cec07655a6318d275739bd8148a/pyemu/utils/helpers.py#L601-L713
def kl_setup(num_eig,sr,struct,prefixes, factors_file="kl_factors.dat",islog=True, basis_file=None, tpl_dir="."): """setup a karhuenen-Loeve based parameterization for a given geostatistical structure. Parameters ---------- num_eig : int number of basis vectors to ...
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setup a karhuenen-Loeve based parameterization for a given geostatistical structure. Parameters ---------- num_eig : int number of basis vectors to retain in the reduced basis sr : flopy.reference.SpatialReference struct : str or pyemu.geostats.Geostruct geostatistical structur...
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python
train
32.902655
chaoss/grimoirelab-elk
grimoire_elk/enriched/mediawiki.py
https://github.com/chaoss/grimoirelab-elk/blob/64e08b324b36d9f6909bf705145d6451c8d34e65/grimoire_elk/enriched/mediawiki.py#L109-L116
def get_review_sh(self, revision, item): """ Add sorting hat enrichment fields for the author of the revision """ identity = self.get_sh_identity(revision) update = parser.parse(item[self.get_field_date()]) erevision = self.get_item_sh_fields(identity, update) return erevision
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Add sorting hat enrichment fields for the author of the revision
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python
train
39
HIPS/autograd
examples/generative_adversarial_net.py
https://github.com/HIPS/autograd/blob/e3b525302529d7490769d5c0bcfc7457e24e3b3e/examples/generative_adversarial_net.py#L59-L91
def adam_minimax(grad_both, init_params_max, init_params_min, callback=None, num_iters=100, step_size_max=0.001, step_size_min=0.001, b1=0.9, b2=0.999, eps=10**-8): """Adam modified to do minimiax optimization, for instance to help with training generative adversarial networks.""" x_max, unflatten...
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Adam modified to do minimiax optimization, for instance to help with training generative adversarial networks.
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python
train
49.454545
saltstack/salt
salt/utils/thin.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/utils/thin.py#L298-L320
def _get_supported_py_config(tops, extended_cfg): ''' Based on the Salt SSH configuration, create a YAML configuration for the supported Python interpreter versions. This is then written into the thin.tgz archive and then verified by salt.client.ssh.ssh_py_shim.get_executable() Note: Minimum defaul...
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Based on the Salt SSH configuration, create a YAML configuration for the supported Python interpreter versions. This is then written into the thin.tgz archive and then verified by salt.client.ssh.ssh_py_shim.get_executable() Note: Minimum default of 2.x versions is 2.7 and 3.x is 3.0, unless specified in n...
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python
train
36.826087
bcbio/bcbio-nextgen
bcbio/cwl/tool.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/cwl/tool.py#L137-L154
def _run_bunny(args): """Run CWL with rabix bunny. """ main_file, json_file, project_name = _get_main_and_json(args.directory) work_dir = utils.safe_makedir(os.path.join(os.getcwd(), "bunny_work")) flags = ["-b", work_dir] log_file = os.path.join(work_dir, "%s-bunny.log" % project_name) if o...
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Run CWL with rabix bunny.
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python
train
44.388889
saltstack/salt
salt/modules/netaddress.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/netaddress.py#L59-L68
def cidr_netmask(cidr): ''' Get the netmask address associated with a CIDR address. CLI example:: salt myminion netaddress.cidr_netmask 192.168.0.0/20 ''' ips = netaddr.IPNetwork(cidr) return six.text_type(ips.netmask)
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Get the netmask address associated with a CIDR address. CLI example:: salt myminion netaddress.cidr_netmask 192.168.0.0/20
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python
train
24.3
dereneaton/ipyrad
ipyrad/assemble/util.py
https://github.com/dereneaton/ipyrad/blob/5eeb8a178160f45faf71bf47cec4abe998a575d1/ipyrad/assemble/util.py#L865-L886
def clustdealer(pairdealer, optim): """ return optim clusters given iterators, and whether it got all or not""" ccnt = 0 chunk = [] while ccnt < optim: ## try refreshing taker, else quit try: taker = itertools.takewhile(lambda x: x[0] != "//\n", pairdealer) oneclu...
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return optim clusters given iterators, and whether it got all or not
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python
valid
31.227273