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google/neuroglancer
python/neuroglancer/server.py
https://github.com/google/neuroglancer/blob/9efd12741013f464286f0bf3fa0b667f75a66658/python/neuroglancer/server.py#L245-L258
def stop(): """Stop the server, invalidating any viewer URLs. This allows any previously-referenced data arrays to be garbage collected if there are no other references to them. """ global global_server if global_server is not None: ioloop = global_server.ioloop def stop_ioloop(...
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Stop the server, invalidating any viewer URLs. This allows any previously-referenced data arrays to be garbage collected if there are no other references to them.
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python
train
robotools/fontParts
Lib/fontParts/base/normalizers.py
https://github.com/robotools/fontParts/blob/d2ff106fe95f9d566161d936a645157626568712/Lib/fontParts/base/normalizers.py#L752-L777
def normalizeIdentifier(value): """ Normalizes identifier. * **value** must be an :ref:`type-string` or `None`. * **value** must not be longer than 100 characters. * **value** must not contain a character out the range of 0x20 - 0x7E. * Returned value is an unencoded ``unicode`` string. """...
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Normalizes identifier. * **value** must be an :ref:`type-string` or `None`. * **value** must not be longer than 100 characters. * **value** must not contain a character out the range of 0x20 - 0x7E. * Returned value is an unencoded ``unicode`` string.
[ "Normalizes", "identifier", "." ]
python
train
StackStorm/pybind
pybind/nos/v6_0_2f/interface/fc_port/__init__.py
https://github.com/StackStorm/pybind/blob/44c467e71b2b425be63867aba6e6fa28b2cfe7fb/pybind/nos/v6_0_2f/interface/fc_port/__init__.py#L182-L203
def _set_fill_word(self, v, load=False): """ Setter method for fill_word, mapped from YANG variable /interface/fc_port/fill_word (fc-fillword-cfg-type) If this variable is read-only (config: false) in the source YANG file, then _set_fill_word is considered as a private method. Backends looking to po...
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Setter method for fill_word, mapped from YANG variable /interface/fc_port/fill_word (fc-fillword-cfg-type) If this variable is read-only (config: false) in the source YANG file, then _set_fill_word is considered as a private method. Backends looking to populate this variable should do so via calling thi...
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python
train
jingw/pyhdfs
pyhdfs.py
https://github.com/jingw/pyhdfs/blob/b382b34f7cb28b41559f5be73102beb1732cd933/pyhdfs.py#L496-L507
def create_symlink(self, link, destination, **kwargs): """Create a symbolic link at ``link`` pointing to ``destination``. :param link: the path to be created that points to target :param destination: the target of the symbolic link :param createParent: If the parent directories do not e...
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Create a symbolic link at ``link`` pointing to ``destination``. :param link: the path to be created that points to target :param destination: the target of the symbolic link :param createParent: If the parent directories do not exist, should they be created? :type createParent: bool ...
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python
train
Opentrons/opentrons
update-server/otupdate/balena/control.py
https://github.com/Opentrons/opentrons/blob/a7c15cc2636ecb64ab56c7edc1d8a57163aaeadf/update-server/otupdate/balena/control.py#L35-L55
async def _resin_supervisor_restart(): """ Execute a container restart by requesting it from the supervisor. Note that failures here are returned but most likely will not be sent back to the caller, since this is run in a separate workthread. If the system is not responding, look for these log messages...
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Execute a container restart by requesting it from the supervisor. Note that failures here are returned but most likely will not be sent back to the caller, since this is run in a separate workthread. If the system is not responding, look for these log messages.
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python
train
deontologician/restnavigator
restnavigator/halnav.py
https://github.com/deontologician/restnavigator/blob/453b9de4e70e602009d3e3ffafcf77d23c8b07c5/restnavigator/halnav.py#L406-L444
def _recursively_embed(self, doc, update_state=True): '''Crafts a navigator from a hal-json embedded document''' self_link = None self_uri = utils.getpath(doc, '_links.self.href') if self_uri is not None: uri = urlparse.urljoin(self.uri, self_uri) self_link = Link...
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Crafts a navigator from a hal-json embedded document
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python
train
grahambell/pymoc
lib/pymoc/util/tool.py
https://github.com/grahambell/pymoc/blob/0e2e57ce07ff3de6ac024627c1fb6ad30c2fde48/lib/pymoc/util/tool.py#L121-L133
def read_moc(self, filename): """Read a file into the current running MOC object. If the running MOC object has not yet been created, then it is created by reading the file, which will import the MOC metadata. Otherwise the metadata are not imported. """ if self.moc is...
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Read a file into the current running MOC object. If the running MOC object has not yet been created, then it is created by reading the file, which will import the MOC metadata. Otherwise the metadata are not imported.
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python
train
NASA-AMMOS/AIT-Core
ait/core/dtype.py
https://github.com/NASA-AMMOS/AIT-Core/blob/9d85bd9c738e7a6a6fbdff672bea708238b02a3a/ait/core/dtype.py#L385-L398
def decodeElem(self, bytes, index, raw=False): """Decodes a single element at array[index] from a sequence bytes that contain data for the entire array. """ self._assertIndex(index) start = index * self.type.nbytes stop = start + self.type.nbytes if stop > len(b...
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Decodes a single element at array[index] from a sequence bytes that contain data for the entire array.
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python
train
h2oai/h2o-3
h2o-py/h2o/model/clustering.py
https://github.com/h2oai/h2o-3/blob/dd62aaa1e7f680a8b16ee14bc66b0fb5195c2ad8/h2o-py/h2o/model/clustering.py#L9-L27
def size(self, train=False, valid=False, xval=False): """ Get the sizes of each cluster. If all are False (default), then return the training metric value. If more than one options is set to True, then return a dictionary of metrics where the keys are "train", "valid", and "xval...
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Get the sizes of each cluster. If all are False (default), then return the training metric value. If more than one options is set to True, then return a dictionary of metrics where the keys are "train", "valid", and "xval". :param bool train: If True, return the cluster sizes for the t...
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python
test
saltstack/salt
salt/modules/solr.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/solr.py#L284-L310
def _replication_request(command, host=None, core_name=None, params=None): ''' PRIVATE METHOD Performs the requested replication command and returns a dictionary with success, errors and data as keys. The data object will contain the JSON response. command : str The replication command ...
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PRIVATE METHOD Performs the requested replication command and returns a dictionary with success, errors and data as keys. The data object will contain the JSON response. command : str The replication command to execute. host : str (None) The solr host to query. __opts__['host'] is d...
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python
train
dnanexus/dx-toolkit
src/python/dxpy/api.py
https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L847-L851
def notifications_get(input_params={}, always_retry=True, **kwargs): """ Invokes the /notifications/get API method. """ return DXHTTPRequest('/notifications/get', input_params, always_retry=always_retry, **kwargs)
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Invokes the /notifications/get API method.
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python
train
boundlessgeo/gsconfig
src/geoserver/resource.py
https://github.com/boundlessgeo/gsconfig/blob/532f561f32b91ea8debea0573c503dd20988bf40/src/geoserver/resource.py#L20-L28
def md_link(node): """Extract a metadata link tuple from an xml node""" mimetype = node.find("type") mdtype = node.find("metadataType") content = node.find("content") if None in [mimetype, mdtype, content]: return None else: return (mimetype.text, mdtype.text, content.text)
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Extract a metadata link tuple from an xml node
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python
valid
pyQode/pyqode.cobol
pyqode/cobol/api/parsers/names.py
https://github.com/pyQode/pyqode.cobol/blob/eedae4e320a4b2d0c44abb2c3061091321648fb7/pyqode/cobol/api/parsers/names.py#L55-L69
def find(self, name): """ Finds a possible child whose name match the name parameter. :param name: name of the child node to look up :type name: str :return: DocumentNode or None """ for c in self.children: if c.name == name: return c...
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Finds a possible child whose name match the name parameter. :param name: name of the child node to look up :type name: str :return: DocumentNode or None
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python
train
sethmlarson/virtualbox-python
virtualbox/library.py
https://github.com/sethmlarson/virtualbox-python/blob/706c8e3f6e3aee17eb06458e73cbb4bc2d37878b/virtualbox/library.py#L13571-L13588
def get_medium_attachments_of_controller(self, name): """Returns an array of medium attachments which are attached to the the controller with the given name. in name of type str return medium_attachments of type :class:`IMediumAttachment` raises :class:`VBoxErrorObjectNotFound...
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Returns an array of medium attachments which are attached to the the controller with the given name. in name of type str return medium_attachments of type :class:`IMediumAttachment` raises :class:`VBoxErrorObjectNotFound` A storage controller with given name doesn't exist.
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python
train
bastikr/boolean.py
boolean/boolean.py
https://github.com/bastikr/boolean.py/blob/e984df480afc60605e9501a0d3d54d667e8f7dbf/boolean/boolean.py#L646-L698
def _subs(self, substitutions, default, simplify): """ Return an expression where all subterms equal to a key expression are substituted by the corresponding value expression using a mapping of: {expr->expr to substitute.} """ # track the new list of unchanged args or rep...
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Return an expression where all subterms equal to a key expression are substituted by the corresponding value expression using a mapping of: {expr->expr to substitute.}
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python
train
O365/python-o365
O365/excel.py
https://github.com/O365/python-o365/blob/02a71cf3775cc6a3c042e003365d6a07c8c75a73/O365/excel.py#L1751-L1754
def delete_worksheet(self, worksheet_id): """ Deletes a worksheet by it's id """ url = self.build_url(self._endpoints.get('get_worksheet').format(id=quote(worksheet_id))) return bool(self.session.delete(url))
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Deletes a worksheet by it's id
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python
train
Cue/scales
src/greplin/scales/samplestats.py
https://github.com/Cue/scales/blob/0aced26eb050ceb98ee9d5d6cdca8db448666986/src/greplin/scales/samplestats.py#L71-L95
def percentiles(self, percentiles): """Given a list of percentiles (floats between 0 and 1), return a list of the values at those percentiles, interpolating if necessary.""" try: scores = [0.0]*len(percentiles) if self.count > 0: values = self.samples() values.sort() ...
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Given a list of percentiles (floats between 0 and 1), return a list of the values at those percentiles, interpolating if necessary.
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python
train
madedotcom/photon-pump
photonpump/connection.py
https://github.com/madedotcom/photon-pump/blob/ff0736c9cacd43c1f783c9668eefb53d03a3a93e/photonpump/connection.py#L397-L416
async def start(self): """Loop forever reading messages and invoking the operation that caused them""" while True: try: data = await self.reader.read(8192) if self._trace_enabled: self._logger.trace( "Re...
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Loop forever reading messages and invoking the operation that caused them
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python
train
MacHu-GWU/superjson-project
superjson/pkg/dateutil/rrule.py
https://github.com/MacHu-GWU/superjson-project/blob/782ca4b2edbd4b4018b8cedee42eeae7c921b917/superjson/pkg/dateutil/rrule.py#L214-L230
def after(self, dt, inc=False): """ Returns the first recurrence after the given datetime instance. The inc keyword defines what happens if dt is an occurrence. With inc=True, if dt itself is an occurrence, it will be returned. """ if self._cache_complete: gen = self...
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Returns the first recurrence after the given datetime instance. The inc keyword defines what happens if dt is an occurrence. With inc=True, if dt itself is an occurrence, it will be returned.
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python
valid
Qiskit/qiskit-terra
qiskit/visualization/bloch.py
https://github.com/Qiskit/qiskit-terra/blob/d4f58d903bc96341b816f7c35df936d6421267d1/qiskit/visualization/bloch.py#L625-L630
def _hide_tick_lines_and_labels(axis): """ Set visible property of ticklines and ticklabels of an axis to False """ for item in axis.get_ticklines() + axis.get_ticklabels(): item.set_visible(False)
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python
test
bwhite/hadoopy
hadoopy/thirdparty/pyinstaller/PyInstaller/bindepend.py
https://github.com/bwhite/hadoopy/blob/ff39b4e6d4e6efaf1f571cf0f2c0e0d7ab28c2d6/hadoopy/thirdparty/pyinstaller/PyInstaller/bindepend.py#L89-L104
def _getImports_pe(pth): """ Find the binary dependencies of PTH. This implementation walks through the PE header and uses library pefile for that and supports 32/64bit Windows """ import PyInstaller.lib.pefile as pefile pe = pefile.PE(pth) dlls = set() # Some libraries have no ...
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Find the binary dependencies of PTH. This implementation walks through the PE header and uses library pefile for that and supports 32/64bit Windows
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python
train
secdev/scapy
scapy/compat.py
https://github.com/secdev/scapy/blob/3ffe757c184017dd46464593a8f80f85abc1e79a/scapy/compat.py#L23-L33
def lambda_tuple_converter(func): """ Converts a Python 2 function as lambda (x,y): x + y In the Python 3 format: lambda x,y : x + y """ if func is not None and func.__code__.co_argcount == 1: return lambda *args: func(args[0] if len(args) == 1 else args) else: return...
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Converts a Python 2 function as lambda (x,y): x + y In the Python 3 format: lambda x,y : x + y
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python
train
logston/py3s3
py3s3/storage.py
https://github.com/logston/py3s3/blob/1910ca60c53a53d839d6f7b09c05b555f3bfccf4/py3s3/storage.py#L50-L67
def save(self, name, file): """ Saves new content to the file specified by name. The content should be a proper File object or any python file-like object, ready to be read from the beginning. """ # Get the proper name for the file, as it will actually be saved. i...
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Saves new content to the file specified by name. The content should be a proper File object or any python file-like object, ready to be read from the beginning.
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python
train
webadmin87/midnight
midnight_catalog/templatetags/midnight_catalog.py
https://github.com/webadmin87/midnight/blob/b60b3b257b4d633550b82a692f3ea3756c62a0a9/midnight_catalog/templatetags/midnight_catalog.py#L51-L65
def currency(money): """ Фильтр валюты. Форматирует цену в соответствии с установленным количеством знаков после запятой, а также добавлеят символ валюты. :param money: :return: """ decimals = getattr(settings, 'MIDNIGHT_CATALOG_DECIMALS', 2) money = round(float(money), decimals) sym...
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Фильтр валюты. Форматирует цену в соответствии с установленным количеством знаков после запятой, а также добавлеят символ валюты. :param money: :return:
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python
train
Spinmob/spinmob
egg/_gui.py
https://github.com/Spinmob/spinmob/blob/f037f5df07f194bcd4a01f4d9916e57b9e8fb45a/egg/_gui.py#L1547-L1560
def set_item(self, key, value): """ Sets the item by key, and refills the table sorted. """ keys = list(self.keys()) # if it exists, update if key in keys: self.set_value(1,keys.index(key),str(value)) # otherwise we have to add an element els...
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Sets the item by key, and refills the table sorted.
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python
train
ThreatConnect-Inc/tcex
tcex/tcex_bin_validate.py
https://github.com/ThreatConnect-Inc/tcex/blob/dd4d7a1ef723af1561687120191886b9a2fd4b47/tcex/tcex_bin_validate.py#L355-L396
def check_syntax(self, app_path=None): """Run syntax on each ".py" and ".json" file. Args: app_path (str, optional): Defaults to None. The path of Python files. """ app_path = app_path or '.' for filename in sorted(os.listdir(app_path)): error = None ...
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Run syntax on each ".py" and ".json" file. Args: app_path (str, optional): Defaults to None. The path of Python files.
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python
train
davisd50/sparc.cache
sparc/cache/splunk/area.py
https://github.com/davisd50/sparc.cache/blob/f2378aad48c368a53820e97b093ace790d4d4121/sparc/cache/splunk/area.py#L162-L179
def initialize(self): """Instantiates the cache area to be ready for updates""" if self.collname not in self.current_kv_names(): r = self.request('post', self.url+"storage/collections/config", headers={'content-type': 'application/jso...
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Instantiates the cache area to be ready for updates
[ "Instantiates", "the", "cache", "area", "to", "be", "ready", "for", "updates" ]
python
train
brocade/pynos
pynos/versions/ver_7/ver_7_1_0/yang/brocade_notification_stream.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_7/ver_7_1_0/yang/brocade_notification_stream.py#L259-L268
def RIBNextHopLimitExceeded_RIBNextHopLimit(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") RIBNextHopLimitExceeded = ET.SubElement(config, "RIBNextHopLimitExceeded", xmlns="http://brocade.com/ns/brocade-notification-stream") RIBNextHopLimit = ET.SubElem...
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Auto Generated Code
[ "Auto", "Generated", "Code" ]
python
train
ArduPilot/MAVProxy
MAVProxy/modules/lib/MacOS/backend_agg.py
https://github.com/ArduPilot/MAVProxy/blob/f50bdeff33064876f7dc8dc4683d278ff47f75d5/MAVProxy/modules/lib/MacOS/backend_agg.py#L419-L425
def new_figure_manager_given_figure(num, figure): """ Create a new figure manager instance for the given figure. """ canvas = FigureCanvasAgg(figure) manager = FigureManagerBase(canvas, num) return manager
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Create a new figure manager instance for the given figure.
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python
train
wavefrontHQ/python-client
wavefront_api_client/api/search_api.py
https://github.com/wavefrontHQ/python-client/blob/b0f1046a8f68c2c7d69e395f7167241f224c738a/wavefront_api_client/api/search_api.py#L131-L152
def search_alert_deleted_for_facet(self, facet, **kwargs): # noqa: E501 """Lists the values of a specific facet over the customer's deleted alerts # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass asy...
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Lists the values of a specific facet over the customer's deleted alerts # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.search_alert_deleted_for_facet(facet, async_req...
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python
train
prompt-toolkit/pymux
pymux/commands/commands.py
https://github.com/prompt-toolkit/pymux/blob/3f66e62b9de4b2251c7f9afad6c516dc5a30ec67/pymux/commands/commands.py#L337-L342
def _(pymux, variables): " Go to previous active window. " w = pymux.arrangement.get_previous_active_window() if w: pymux.arrangement.set_active_window(w)
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Go to previous active window.
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python
train
uber/multidimensional_urlencode
multidimensional_urlencode/urlencoder.py
https://github.com/uber/multidimensional_urlencode/blob/f626528bc3535503fa1557a53bbfacaa29920251/multidimensional_urlencode/urlencoder.py#L57-L76
def urlencode(params): """Urlencode a multidimensional dict.""" # Not doing duck typing here. Will make debugging easier. if not isinstance(params, dict): raise TypeError("Only dicts are supported.") params = flatten(params) url_params = OrderedDict() for param in params: valu...
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Urlencode a multidimensional dict.
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python
train
MacHu-GWU/single_file_module-project
sfm/dtree.py
https://github.com/MacHu-GWU/single_file_module-project/blob/01f7a6b250853bebfd73de275895bf274325cfc1/sfm/dtree.py#L271-L311
def stats(self, result=None, counter=0): """ Display the node stats info on specific depth in this dict. :: [ {"depth": 0, "leaf": M0, "root": N0}, {"depth": 1, "leaf": M1, "root": N1}, ... {"depth": k, "leaf": Mk, "ro...
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Display the node stats info on specific depth in this dict. :: [ {"depth": 0, "leaf": M0, "root": N0}, {"depth": 1, "leaf": M1, "root": N1}, ... {"depth": k, "leaf": Mk, "root": Nk}, ]
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python
train
chriskiehl/Gooey
gooey/gui/components/widgets/radio_group.py
https://github.com/chriskiehl/Gooey/blob/e598573c6519b953e0ccfc1f3663f827f8cd7e22/gooey/gui/components/widgets/radio_group.py#L95-L106
def applyStyleRules(self): """ Conditionally disabled/enables form fields based on the current section in the radio group """ for button, widget in zip(self.radioButtons, self.widgets): if isinstance(widget, CheckBox): widget.hideInput() ...
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Conditionally disabled/enables form fields based on the current section in the radio group
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python
train
hyperledger/indy-plenum
plenum/server/node.py
https://github.com/hyperledger/indy-plenum/blob/dcd144e238af7f17a869ffc9412f13dc488b7020/plenum/server/node.py#L1411-L1421
async def service_observable(self, limit) -> int: """ Service the observable's inBox and outBox :return: the number of messages successfully serviced """ if not self.isReady(): return 0 o = self._service_observable_out_box(limit) i = await self._obser...
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Service the observable's inBox and outBox :return: the number of messages successfully serviced
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python
train
rocky/python3-trepan
trepan/processor/cmdproc.py
https://github.com/rocky/python3-trepan/blob/14e91bc0acce090d67be145b1ac040cab92ac5f3/trepan/processor/cmdproc.py#L75-L105
def get_stack(f, t, botframe, proc_obj=None): """Return a stack of frames which the debugger will use for in showing backtraces and in frame switching. As such various frame that are really around may be excluded unless we are debugging the sebugger. Also we will add traceback frame on top if that e...
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Return a stack of frames which the debugger will use for in showing backtraces and in frame switching. As such various frame that are really around may be excluded unless we are debugging the sebugger. Also we will add traceback frame on top if that exists.
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python
test
google/grr
grr/server/grr_response_server/aff4_objects/security.py
https://github.com/google/grr/blob/5cef4e8e2f0d5df43ea4877e9c798e0bf60bfe74/grr/server/grr_response_server/aff4_objects/security.py#L400-L402
def ApprovalUrnBuilder(subject, user, approval_id): """Encode an approval URN.""" return aff4.ROOT_URN.Add("ACL").Add(subject).Add(user).Add(approval_id)
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Encode an approval URN.
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python
train
tensorforce/tensorforce
tensorforce/core/optimizers/clipped_step.py
https://github.com/tensorforce/tensorforce/blob/520a8d992230e382f08e315ede5fc477f5e26bfb/tensorforce/core/optimizers/clipped_step.py#L44-L73
def tf_step(self, time, variables, **kwargs): """ Creates the TensorFlow operations for performing an optimization step. Args: time: Time tensor. variables: List of variables to optimize. **kwargs: Additional arguments passed on to the internal optimizer. ...
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Creates the TensorFlow operations for performing an optimization step. Args: time: Time tensor. variables: List of variables to optimize. **kwargs: Additional arguments passed on to the internal optimizer. Returns: List of delta tensors corresponding to ...
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python
valid
jason-weirather/py-seq-tools
seqtools/format/sam/bam/__init__.py
https://github.com/jason-weirather/py-seq-tools/blob/f642c2c73ffef2acc83656a78059a476fc734ca1/seqtools/format/sam/bam/__init__.py#L328-L379
def _bin_to_extra(extra_bytes): """Pre all the reamining bytes of an entry Post an array of 1. A dict keyed by Tag with {'type':,'value':} where value is a string unless type is i 2. A string of the remainder """ #global _bam_value_type extra = StringIO(extra_bytes) tags = {} rem = '' while extra...
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Pre all the reamining bytes of an entry Post an array of 1. A dict keyed by Tag with {'type':,'value':} where value is a string unless type is i 2. A string of the remainder
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python
train
clach04/python-tuya
pytuya/__init__.py
https://github.com/clach04/python-tuya/blob/7b89d38c56f6e25700e2a333000d25bc8d923622/pytuya/__init__.py#L160-L174
def _send_receive(self, payload): """ Send single buffer `payload` and receive a single buffer. Args: payload(bytes): Data to send. """ s = socket.socket(socket.AF_INET, socket.SOCK_STREAM) s.setsockopt(socket.IPPROTO_TCP, socket.TCP_NODELAY, 1) ...
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Send single buffer `payload` and receive a single buffer. Args: payload(bytes): Data to send.
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python
train
saltstack/salt
salt/modules/boto_route53.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/boto_route53.py#L110-L179
def describe_hosted_zones(zone_id=None, domain_name=None, region=None, key=None, keyid=None, profile=None): ''' Return detailed info about one, or all, zones in the bound account. If neither zone_id nor domain_name is provided, return all zones. Note that the return format is s...
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Return detailed info about one, or all, zones in the bound account. If neither zone_id nor domain_name is provided, return all zones. Note that the return format is slightly different between the 'all' and 'single' description types. zone_id The unique identifier for the Hosted Zone domain...
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python
train
rwl/pylon
examples/pyreto/thesis/common.py
https://github.com/rwl/pylon/blob/916514255db1ae1661406f0283df756baf960d14/examples/pyreto/thesis/common.py#L220-L226
def get_neg_one_task_agent(generators, market, nOffer, maxSteps): """ Returns a task-agent tuple whose action is always minus one. """ env = pyreto.discrete.MarketEnvironment(generators, market, nOffer) task = pyreto.discrete.ProfitTask(env, maxSteps=maxSteps) agent = pyreto.util.NegOneAgent(env.out...
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Returns a task-agent tuple whose action is always minus one.
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python
train
CEA-COSMIC/ModOpt
modopt/math/metrics.py
https://github.com/CEA-COSMIC/ModOpt/blob/019b189cb897cbb4d210c44a100daaa08468830c/modopt/math/metrics.py#L216-L247
def nrmse(test, ref, mask=None): """Return NRMSE Parameters ---------- ref : np.ndarray the reference image test : np.ndarray the tested image mask : np.ndarray, optional the mask for the ROI Notes ----- Compute the metric only on magnitude. Returns ...
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Return NRMSE Parameters ---------- ref : np.ndarray the reference image test : np.ndarray the tested image mask : np.ndarray, optional the mask for the ROI Notes ----- Compute the metric only on magnitude. Returns ------- nrmse: float, the nrmse
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python
train
flo-compbio/genometools
genometools/rnaseq/stringtie_gene_level_expression.py
https://github.com/flo-compbio/genometools/blob/dd962bb26d60a0f14ca14d8c9a4dd75768962c7d/genometools/rnaseq/stringtie_gene_level_expression.py#L91-L260
def main(args=None): """Extracts gene-level expression data from StringTie output. Parameters ---------- args: argparse.Namespace object, optional The argument values. If not specified, the values will be obtained by parsing the command line arguments using the `argparse` module. R...
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Extracts gene-level expression data from StringTie output. Parameters ---------- args: argparse.Namespace object, optional The argument values. If not specified, the values will be obtained by parsing the command line arguments using the `argparse` module. Returns ------- int ...
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python
train
LonamiWebs/Telethon
telethon/tl/custom/draft.py
https://github.com/LonamiWebs/Telethon/blob/1ead9757d366b58c1e0567cddb0196e20f1a445f/telethon/tl/custom/draft.py#L73-L84
async def get_entity(self): """ Returns `entity` but will make an API call if necessary. """ if not self.entity and await self.get_input_entity(): try: self._entity =\ await self._client.get_entity(self._input_entity) except Val...
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Returns `entity` but will make an API call if necessary.
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python
train
apple/turicreate
deps/src/libxml2-2.9.1/python/libxml2.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/deps/src/libxml2-2.9.1/python/libxml2.py#L4047-L4051
def htmlSaveFile(self, filename): """Dump an HTML document to a file. If @filename is "-" the stdout file is used. """ ret = libxml2mod.htmlSaveFile(filename, self._o) return ret
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Dump an HTML document to a file. If @filename is "-" the stdout file is used.
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python
train
counsyl/django-pedant
pedant/decorators.py
https://github.com/counsyl/django-pedant/blob/9a9a77eacbceafebb150c80d81f78c9b19ed4d53/pedant/decorators.py#L242-L254
def fail_on_template_errors(f, *args, **kwargs): """ Decorator that causes templates to fail on template errors. """ decorators = [ _fail_template_string_if_invalid, _always_strict_resolve, _disallow_catching_UnicodeDecodeError, ] if django.VERSION < (1, 8): decor...
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Decorator that causes templates to fail on template errors.
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python
train
pantsbuild/pants
src/python/pants/backend/jvm/tasks/coursier_resolve.py
https://github.com/pantsbuild/pants/blob/b72e650da0df685824ffdcc71988b8c282d0962d/src/python/pants/backend/jvm/tasks/coursier_resolve.py#L690-L704
def execute(self): """Resolves the specified confs for the configured targets and returns an iterator over tuples of (conf, jar path). """ jvm_resolve_subsystem = JvmResolveSubsystem.global_instance() if jvm_resolve_subsystem.get_options().resolver != 'coursier': return # executor = self...
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Resolves the specified confs for the configured targets and returns an iterator over tuples of (conf, jar path).
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python
train
sci-bots/mpm
mpm/api.py
https://github.com/sci-bots/mpm/blob/a69651cda4b37ee6b17df4fe0809249e7f4dc536/mpm/api.py#L240-L299
def rollback(*args, **kwargs): ''' Restore previous revision of Conda environment according to most recent action in :attr:`MICRODROP_CONDA_ACTIONS`. .. versionchanged:: 0.18 Add support for action revision files compressed using ``bz2``. .. versionchanged:: 0.24 Remove channels ar...
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Restore previous revision of Conda environment according to most recent action in :attr:`MICRODROP_CONDA_ACTIONS`. .. versionchanged:: 0.18 Add support for action revision files compressed using ``bz2``. .. versionchanged:: 0.24 Remove channels argument. Use Conda channels as configured i...
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python
train
pycontribs/pyrax
pyrax/cloudloadbalancers.py
https://github.com/pycontribs/pyrax/blob/9ddfd5064b3a292d7337906f3b2d5dce95b50b99/pyrax/cloudloadbalancers.py#L1210-L1217
def to_dict(self): """ Convert this VirtualIP to a dict representation for passing to the API. """ if self.id: return {"id": self.id} return {"type": self.type, "ipVersion": self.ip_version}
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Convert this VirtualIP to a dict representation for passing to the API.
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python
train
juju/charm-helpers
charmhelpers/contrib/openstack/utils.py
https://github.com/juju/charm-helpers/blob/aa785c40c3b7a8c69dbfbc7921d6b9f30142e171/charmhelpers/contrib/openstack/utils.py#L1681-L1691
def token_cache_pkgs(source=None, release=None): """Determine additional packages needed for token caching @param source: source string for charm @param release: release of OpenStack currently deployed @returns List of package to enable token caching """ packages = [] if enable_memcache(sou...
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Determine additional packages needed for token caching @param source: source string for charm @param release: release of OpenStack currently deployed @returns List of package to enable token caching
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python
train
ManiacalLabs/PixelWeb
pixelweb/bottle.py
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2550-L2566
def parse_range_header(header, maxlen=0): ''' Yield (start, end) ranges parsed from a HTTP Range header. Skip unsatisfiable ranges. The end index is non-inclusive.''' if not header or header[:6] != 'bytes=': return ranges = [r.split('-', 1) for r in header[6:].split(',') if '-' in r] for start, ...
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Yield (start, end) ranges parsed from a HTTP Range header. Skip unsatisfiable ranges. The end index is non-inclusive.
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python
train
edeposit/edeposit.app.fields
edeposit/app/fields/utils.py
https://github.com/edeposit/edeposit.app.fields/blob/dfdf1f0bc435e2eac1b55ca9e69f3b29f8153e14/edeposit/app/fields/utils.py#L11-L28
def normalizeISBN(isbn): """ >>> normalizeISBN('978800105473-4') '978-80-01-05473-4' >>> normalizeISBN('80978800105473-4') '80978800105473-4' >>> normalizeISBN('988800105473-4') '988800105473-4' >>> normalizeISBN('978-80-254-94677') '978-80-254-9467-7' """ try: ret...
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>>> normalizeISBN('978800105473-4') '978-80-01-05473-4' >>> normalizeISBN('80978800105473-4') '80978800105473-4' >>> normalizeISBN('988800105473-4') '988800105473-4' >>> normalizeISBN('978-80-254-94677') '978-80-254-9467-7'
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python
train
apache/incubator-mxnet
example/ctc/lstm_ocr_infer.py
https://github.com/apache/incubator-mxnet/blob/1af29e9c060a4c7d60eeaacba32afdb9a7775ba7/example/ctc/lstm_ocr_infer.py#L39-L45
def lstm_init_states(batch_size): """ Returns a tuple of names and zero arrays for LSTM init states""" hp = Hyperparams() init_shapes = lstm.init_states(batch_size=batch_size, num_lstm_layer=hp.num_lstm_layer, num_hidden=hp.num_hidden) init_names = [s[0] for s in init_shapes] init_arrays = [mx.nd.ze...
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Returns a tuple of names and zero arrays for LSTM init states
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python
train
prompt-toolkit/ptpython
ptpython/completer.py
https://github.com/prompt-toolkit/ptpython/blob/b1bba26a491324cd65e0ef46c7b818c4b88fd993/ptpython/completer.py#L107-L166
def get_completions(self, document, complete_event): """ Get Python completions. """ # Do Path completions if complete_event.completion_requested or self._complete_path_while_typing(document): for c in self._path_completer.get_completions(document, complete_event): ...
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Get Python completions.
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python
train
coghost/izen
izen/helper.py
https://github.com/coghost/izen/blob/432db017f99dd2ba809e1ba1792145ab6510263d/izen/helper.py#L1115-L1131
def words(fpth): """ ww = words(os.path.join(app_root, 'ig/helper.py')) for k, v in (ww.most_common(3)): print(k, v) :param fpth: :type fpth: :return: :rtype: """ from collections import Counter words__ = Counter() with open(fpth) as fp: for line in fp: ...
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ww = words(os.path.join(app_root, 'ig/helper.py')) for k, v in (ww.most_common(3)): print(k, v) :param fpth: :type fpth: :return: :rtype:
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python
train
saltstack/salt
salt/modules/chocolatey.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/chocolatey.py#L90-L109
def _find_chocolatey(context, salt): ''' Returns the full path to chocolatey.bat on the host. ''' if 'chocolatey._path' in context: return context['chocolatey._path'] choc_defaults = ['C:\\Chocolatey\\bin\\chocolatey.bat', 'C:\\ProgramData\\Chocolatey\\bin\\chocolatey.ex...
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Returns the full path to chocolatey.bat on the host.
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python
train
twilio/twilio-python
twilio/rest/api/v2010/account/call/__init__.py
https://github.com/twilio/twilio-python/blob/c867895f55dcc29f522e6e8b8868d0d18483132f/twilio/rest/api/v2010/account/call/__init__.py#L131-L179
def stream(self, to=values.unset, from_=values.unset, parent_call_sid=values.unset, status=values.unset, start_time_before=values.unset, start_time=values.unset, start_time_after=values.unset, end_time_before=values.unset, end_time=values.unset, end_time_after...
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Streams CallInstance records from the API as a generator stream. This operation lazily loads records as efficiently as possible until the limit is reached. The results are returned as a generator, so this operation is memory efficient. :param unicode to: Phone number or Client identifie...
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python
train
consbio/ncdjango
ncdjango/geoprocessing/evaluation.py
https://github.com/consbio/ncdjango/blob/f807bfd1e4083ab29fbc3c4d4418be108383a710/ncdjango/geoprocessing/evaluation.py#L390-L398
def fn_mean(self, a, axis=None): """ Compute the arithmetic mean of an array, ignoring NaNs. :param a: The array. :return: The arithmetic mean of the array. """ return numpy.nanmean(self._to_ndarray(a), axis=axis)
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Compute the arithmetic mean of an array, ignoring NaNs. :param a: The array. :return: The arithmetic mean of the array.
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python
train
percipient/django-querysetsequence
queryset_sequence/__init__.py
https://github.com/percipient/django-querysetsequence/blob/7bf324b08af6268821d235c18482847d7bf75eaa/queryset_sequence/__init__.py#L29-L35
def multiply_iterables(it1, it2): """ Element-wise iterables multiplications. """ assert len(it1) == len(it2),\ "Can not element-wise multiply iterables of different length." return list(map(mul, it1, it2))
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Element-wise iterables multiplications.
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python
train
google/flatbuffers
python/flatbuffers/builder.py
https://github.com/google/flatbuffers/blob/6cc30b3272d79c85db7d4871ac0aa69541dc89de/python/flatbuffers/builder.py#L166-L273
def WriteVtable(self): """ WriteVtable serializes the vtable for the current object, if needed. Before writing out the vtable, this checks pre-existing vtables for equality to this one. If an equal vtable is found, point the object to the existing vtable and return. Bec...
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WriteVtable serializes the vtable for the current object, if needed. Before writing out the vtable, this checks pre-existing vtables for equality to this one. If an equal vtable is found, point the object to the existing vtable and return. Because vtable values are sensitive to alignme...
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python
train
alpacahq/pylivetrader
pylivetrader/loader.py
https://github.com/alpacahq/pylivetrader/blob/fd328b6595428c0789d9f218df34623f83a02b8b/pylivetrader/loader.py#L72-L79
def translate(script): '''translate zipline script into pylivetrader script. ''' tree = ast.parse(script) ZiplineImportVisitor().visit(tree) return astor.to_source(tree)
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translate zipline script into pylivetrader script.
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python
train
mitsei/dlkit
dlkit/primordium/transport/objects.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/primordium/transport/objects.py#L63-L76
def skip(self, n): """Skips a specified number of ``bytes`` in the stream. arg: n (cardinal): the number of ``bytes`` to skip return: (cardinal) - the actual number of ``bytes`` skipped raise: IllegalState - this stream has been closed or ``at_end_of_stream()`` is ``...
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Skips a specified number of ``bytes`` in the stream. arg: n (cardinal): the number of ``bytes`` to skip return: (cardinal) - the actual number of ``bytes`` skipped raise: IllegalState - this stream has been closed or ``at_end_of_stream()`` is ``true`` *compliance: ma...
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python
train
genialis/resolwe
resolwe/flow/executors/local/prepare.py
https://github.com/genialis/resolwe/blob/f7bb54932c81ec0cfc5b5e80d238fceaeaa48d86/resolwe/flow/executors/local/prepare.py#L22-L30
def extend_settings(self, data_id, files, secrets): """Prevent processes requiring access to secrets from being run.""" process = Data.objects.get(pk=data_id).process if process.requirements.get('resources', {}).get('secrets', False): raise PermissionDenied( "Process ...
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Prevent processes requiring access to secrets from being run.
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python
train
The-Politico/politico-civic-demography
demography/management/commands/legacy_census.py
https://github.com/The-Politico/politico-civic-demography/blob/080bb964b64b06db7fd04386530e893ceed1cf98/demography/management/commands/legacy_census.py#L196-L213
def aggregate_variable(estimate, id): """ Aggregate census table variables by a custom label. """ estimates = [ variable.estimates.get(division__id=id).estimate for variable in estimate.variable.label.variables.all() ] method = estimate.variable.la...
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Aggregate census table variables by a custom label.
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python
train
saltstack/salt
salt/utils/win_lgpo_netsh.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/utils/win_lgpo_netsh.py#L148-L224
def get_settings(profile, section, store='local'): ''' Get the firewall property from the specified profile in the specified store as returned by ``netsh advfirewall``. Args: profile (str): The firewall profile to query. Valid options are: - domain - public...
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Get the firewall property from the specified profile in the specified store as returned by ``netsh advfirewall``. Args: profile (str): The firewall profile to query. Valid options are: - domain - public - private section (str): The ...
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python
train
justquick/django-native-tags
native_tags/registry.py
https://github.com/justquick/django-native-tags/blob/d40b976ee1cb13faeb04f0dedf02933d4274abf2/native_tags/registry.py#L121-L125
def get_doc(self, tag_name): "Get documentation for the first tag matching the given name" for tag,func in self.tags: if tag.startswith(tag_name) and func.__doc__: return func.__doc__
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Get documentation for the first tag matching the given name
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python
train
e-dard/flask-s3
flask_s3.py
https://github.com/e-dard/flask-s3/blob/b8c72b40eb38a05135eec36a90f1ee0c96248f72/flask_s3.py#L132-L165
def url_for(endpoint, **values): """ Generates a URL to the given endpoint. If the endpoint is for a static resource then an Amazon S3 URL is generated, otherwise the call is passed on to `flask.url_for`. Because this function is set as a jinja environment variable when `FlaskS3.init_app` is i...
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Generates a URL to the given endpoint. If the endpoint is for a static resource then an Amazon S3 URL is generated, otherwise the call is passed on to `flask.url_for`. Because this function is set as a jinja environment variable when `FlaskS3.init_app` is invoked, this function replaces `flask.url...
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python
train
tdryer/hangups
hangups/client.py
https://github.com/tdryer/hangups/blob/85c0bf0a57698d077461283895707260f9dbf931/hangups/client.py#L660-L665
async def sync_all_new_events(self, sync_all_new_events_request): """List all events occurring at or after a timestamp.""" response = hangouts_pb2.SyncAllNewEventsResponse() await self._pb_request('conversations/syncallnewevents', sync_all_new_events_request, respo...
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List all events occurring at or after a timestamp.
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python
valid
pyroscope/pyrocore
src/pyrocore/torrent/formatting.py
https://github.com/pyroscope/pyrocore/blob/89ad01346a570943d20311a0b488440975876612/src/pyrocore/torrent/formatting.py#L352-L390
def validate_sort_fields(sort_fields): """ Make sure the fields in the given list exist, and return sorting key. If field names are prefixed with '-', sort order is reversed for that field (descending). """ # Allow descending order per field by prefixing with '-' descending = set() def sort...
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Make sure the fields in the given list exist, and return sorting key. If field names are prefixed with '-', sort order is reversed for that field (descending).
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python
train
DistrictDataLabs/yellowbrick
yellowbrick/contrib/missing/base.py
https://github.com/DistrictDataLabs/yellowbrick/blob/59b67236a3862c73363e8edad7cd86da5b69e3b2/yellowbrick/contrib/missing/base.py#L32-L63
def fit(self, X, y=None, **kwargs): """ The fit method is the primary drawing input for the visualization since it has both the X and y data required for the viz and the transform method does not. Parameters ---------- X : ndarray or DataFrame of shape n x m ...
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The fit method is the primary drawing input for the visualization since it has both the X and y data required for the viz and the transform method does not. Parameters ---------- X : ndarray or DataFrame of shape n x m A matrix of n instances with m features ...
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python
train
aiortc/aiortc
aiortc/rtcrtpsender.py
https://github.com/aiortc/aiortc/blob/60ed036abf4575bd63985724b4493d569e6da29b/aiortc/rtcrtpsender.py#L105-L128
async def getStats(self): """ Returns statistics about the RTP sender. :rtype: :class:`RTCStatsReport` """ self.__stats.add(RTCOutboundRtpStreamStats( # RTCStats timestamp=clock.current_datetime(), type='outbound-rtp', id='outbound...
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Returns statistics about the RTP sender. :rtype: :class:`RTCStatsReport`
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python
train
hobson/pug-invest
pug/invest/plot.py
https://github.com/hobson/pug-invest/blob/836911258a0e920083a88c91beae88eefdebb20c/pug/invest/plot.py#L259-L274
def thin_string_list(list_of_strings, max_nonempty_strings=50, blank=''): """Designed for composing lists of strings suitable for pyplot axis labels Often the xtick spacing doesn't allow room for 100's of text labels, so this eliminates every other one, then every other one of those, until they fit. >...
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Designed for composing lists of strings suitable for pyplot axis labels Often the xtick spacing doesn't allow room for 100's of text labels, so this eliminates every other one, then every other one of those, until they fit. >>> thin_string_list(['x']*20, 5) # doctring: +NORMALIZE_WHITESPACE ['x', '',...
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python
train
watson-developer-cloud/python-sdk
ibm_watson/discovery_v1.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/discovery_v1.py#L5822-L5841
def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'environment_id') and self.environment_id is not None: _dict['environment_id'] = self.environment_id if hasattr(self, 'session_token') and self.session_token is not None: ...
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Return a json dictionary representing this model.
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python
train
ic-labs/django-icekit
icekit/mixins.py
https://github.com/ic-labs/django-icekit/blob/c507ea5b1864303732c53ad7c5800571fca5fa94/icekit/mixins.py#L213-L219
def get_og_title(self): """ return meta_title if exists otherwise fall back to title """ if hasattr(self, 'meta_title') and self.meta_title: return self.meta_title return self.get_title()
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return meta_title if exists otherwise fall back to title
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python
train
SBRG/ssbio
ssbio/protein/structure/properties/residues.py
https://github.com/SBRG/ssbio/blob/e9449e64ffc1a1f5ad07e5849aa12a650095f8a2/ssbio/protein/structure/properties/residues.py#L159-L220
def get_structure_seqrecords(model): """Get a dictionary of a PDB file's sequences. Special cases include: - Insertion codes. In the case of residue numbers like "15A", "15B", both residues are written out. Example: 9LPR - HETATMs. Currently written as an "X", or unknown amino acid. Args: ...
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Get a dictionary of a PDB file's sequences. Special cases include: - Insertion codes. In the case of residue numbers like "15A", "15B", both residues are written out. Example: 9LPR - HETATMs. Currently written as an "X", or unknown amino acid. Args: model: Biopython Model object of a S...
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python
train
saltstack/salt
salt/cloud/clouds/xen.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/cloud/clouds/xen.py#L1056-L1075
def sr_list(call=None): ''' Geta list of storage repositories .. code-block:: bash salt-cloud -f sr_list myxen ''' if call != 'function': raise SaltCloudSystemExit( 'This function must be called with -f, --function argument.' ) ret = {} session = _get_s...
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Geta list of storage repositories .. code-block:: bash salt-cloud -f sr_list myxen
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python
train
RudolfCardinal/pythonlib
cardinal_pythonlib/sphinxtools.py
https://github.com/RudolfCardinal/pythonlib/blob/0b84cb35f38bd7d8723958dae51b480a829b7227/cardinal_pythonlib/sphinxtools.py#L300-L310
def python_module_name(self) -> str: """ Returns the name of the Python module that this instance refers to, in dotted Python module notation, or a blank string if it doesn't. """ if not self.is_python: return "" filepath = self.source_filename_rel_python_root...
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Returns the name of the Python module that this instance refers to, in dotted Python module notation, or a blank string if it doesn't.
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python
train
jsommers/switchyard
switchyard/lib/packet/null.py
https://github.com/jsommers/switchyard/blob/fdcb3869c937dcedbd6ea7a7822ebd412bf1e2b0/switchyard/lib/packet/null.py#L43-L50
def from_bytes(self, raw): '''Return a Null header object reconstructed from raw bytes, or an Exception if we can't resurrect the packet.''' if len(raw) < 4: raise NotEnoughDataError("Not enough bytes ({}) to reconstruct a Null object".format(len(raw))) fields = struct.unpack...
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Return a Null header object reconstructed from raw bytes, or an Exception if we can't resurrect the packet.
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python
train
honmaple/flask-msearch
flask_msearch/elasticsearch_backend.py
https://github.com/honmaple/flask-msearch/blob/4d4dacbe83aa23e852e66a02c51f6f4b1da4445f/flask_msearch/elasticsearch_backend.py#L67-L71
def update(self, **kwargs): "Update document not update index." kw = dict(index=self.name, doc_type=self.doc_type, ignore=[404]) kw.update(**kwargs) return self._client.update(**kw)
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Update document not update index.
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python
train
CiscoTestAutomation/yang
ncdiff/src/yang/ncdiff/model.py
https://github.com/CiscoTestAutomation/yang/blob/c70ec5ac5a91f276c4060009203770ece92e76b4/ncdiff/src/yang/ncdiff/model.py#L399-L432
def convert_tree(self, element1, element2=None): '''convert_tree High-level api: Convert cxml tree to an internal schema tree. This method is recursive. Parameters ---------- element1 : `Element` The node to be converted. element2 : `Element` ...
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convert_tree High-level api: Convert cxml tree to an internal schema tree. This method is recursive. Parameters ---------- element1 : `Element` The node to be converted. element2 : `Element` A new node being constructed. Returns ...
[ "convert_tree" ]
python
train
riptano/ccm
ccmlib/remote.py
https://github.com/riptano/ccm/blob/275699f79d102b5039b79cc17fa6305dccf18412/ccmlib/remote.py#L171-L242
def execute(self, command, is_displayed=True, profile=None): """ Execute a command on the remote server :param command: Command to execute remotely :param is_displayed: True if information should be display; false to return output (default: true) :pa...
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Execute a command on the remote server :param command: Command to execute remotely :param is_displayed: True if information should be display; false to return output (default: true) :param profile: Profile to source (unix like system only should set this) ...
[ "Execute", "a", "command", "on", "the", "remote", "server" ]
python
train
biocommons/hgvs
hgvs/variantmapper.py
https://github.com/biocommons/hgvs/blob/4d16efb475e1802b2531a2f1c373e8819d8e533b/hgvs/variantmapper.py#L133-L172
def g_to_n(self, var_g, tx_ac, alt_aln_method=hgvs.global_config.mapping.alt_aln_method): """Given a parsed g. variant, return a n. variant on the specified transcript using the specified alignment method (default is "splign" from NCBI). :param hgvs.sequencevariant.SequenceVariant var_g...
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Given a parsed g. variant, return a n. variant on the specified transcript using the specified alignment method (default is "splign" from NCBI). :param hgvs.sequencevariant.SequenceVariant var_g: a variant object :param str tx_ac: a transcript accession (e.g., NM_012345.6 or ENST0123456...
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python
train
bububa/pyTOP
pyTOP/logistics.py
https://github.com/bububa/pyTOP/blob/1e48009bcfe886be392628244b370e6374e1f2b2/pyTOP/logistics.py#L342-L349
def remove(self, contact_id, session): '''taobao.logistics.address.remove 删除卖家地址库 用此接口删除卖家地址库''' request = TOPRequest('taobao.logistics.address.remove') request['contact_id'] = contact_id self.create(self.execute(request, session)) return self.address_result
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taobao.logistics.address.remove 删除卖家地址库 用此接口删除卖家地址库
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python
train
alefnula/tea
tea/shell/__init__.py
https://github.com/alefnula/tea/blob/f5a0a724a425ec4f9dd2c7fe966ef06faf3a15a3/tea/shell/__init__.py#L95-L127
def goto(directory, create=False): """Context object for changing directory. Args: directory (str): Directory to go to. create (bool): Create directory if it doesn't exists. Usage:: >>> with goto(directory) as ok: ... if not ok: ... print 'Error' ...
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Context object for changing directory. Args: directory (str): Directory to go to. create (bool): Create directory if it doesn't exists. Usage:: >>> with goto(directory) as ok: ... if not ok: ... print 'Error' ... else: ... print ...
[ "Context", "object", "for", "changing", "directory", "." ]
python
train
intel-analytics/BigDL
pyspark/bigdl/nn/layer.py
https://github.com/intel-analytics/BigDL/blob/e9c19788285986ab789a2e2998f9a85d7524779f/pyspark/bigdl/nn/layer.py#L576-L584
def freeze(self, names=None): """ freeze module, if names is not None, set an array of layers that match given names to be freezed :param names: an array of layer names :return: """ callBigDlFunc(self.bigdl_type, "freeze", self.value, names) return self
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freeze module, if names is not None, set an array of layers that match given names to be freezed :param names: an array of layer names :return:
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python
test
pallets/werkzeug
src/werkzeug/wrappers/etag.py
https://github.com/pallets/werkzeug/blob/a220671d66755a94630a212378754bb432811158/src/werkzeug/wrappers/etag.py#L251-L258
def freeze(self, no_etag=False): """Call this method if you want to make your response object ready for pickeling. This buffers the generator if there is one. This also sets the etag unless `no_etag` is set to `True`. """ if not no_etag: self.add_etag() supe...
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Call this method if you want to make your response object ready for pickeling. This buffers the generator if there is one. This also sets the etag unless `no_etag` is set to `True`.
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python
train
boakley/robotframework-lint
rflint/parser/tables.py
https://github.com/boakley/robotframework-lint/blob/3e3578f4e39af9af9961aa0a715f146b74474091/rflint/parser/tables.py#L35-L71
def statements(self): '''Return a list of statements This is done by joining together any rows that have continuations ''' # FIXME: no need to do this every time; we should cache the # result if len(self.rows) == 0: return [] current_statemen...
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Return a list of statements This is done by joining together any rows that have continuations
[ "Return", "a", "list", "of", "statements" ]
python
valid
gem/oq-engine
openquake/hazardlib/gsim/drouet_alpes_2015.py
https://github.com/gem/oq-engine/blob/8294553a0b8aba33fd96437a35065d03547d0040/openquake/hazardlib/gsim/drouet_alpes_2015.py#L119-L126
def _compute_mean(self, C, mag, r): """ Compute mean value according to equation 30, page 1021. """ mean = (C['c1'] + self._compute_term1(C, mag) + self._compute_term2(C, mag, r)) return mean
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Compute mean value according to equation 30, page 1021.
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python
train
smarie/python-valid8
valid8/composition.py
https://github.com/smarie/python-valid8/blob/5e15d1de11602933c5114eb9f73277ad91d97800/valid8/composition.py#L539-L565
def pop_kwargs(kwargs, names_with_defaults, # type: List[Tuple[str, Any]] allow_others=False ): """ Internal utility method to extract optional arguments from kwargs. :param kwargs: :param names_with_defaults: :param allow_others: if False (default) the...
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Internal utility method to extract optional arguments from kwargs. :param kwargs: :param names_with_defaults: :param allow_others: if False (default) then an error will be raised if kwargs still contains something at the end. :return:
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python
train
tdryer/hangups
hangups/conversation.py
https://github.com/tdryer/hangups/blob/85c0bf0a57698d077461283895707260f9dbf931/hangups/conversation.py#L337-L352
def _wrap_event(event_): """Wrap hangouts_pb2.Event in ConversationEvent subclass.""" cls = conversation_event.ConversationEvent if event_.HasField('chat_message'): cls = conversation_event.ChatMessageEvent elif event_.HasField('otr_modification'): cls = conversat...
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Wrap hangouts_pb2.Event in ConversationEvent subclass.
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python
valid
QUANTAXIS/QUANTAXIS
QUANTAXIS/QAData/base_datastruct.py
https://github.com/QUANTAXIS/QUANTAXIS/blob/bb1fe424e4108b62a1f712b81a05cf829297a5c0/QUANTAXIS/QAData/base_datastruct.py#L618-L627
def security_gen(self): '返回一个基于代码的迭代器' for item in self.index.levels[1]: yield self.new( self.data.xs(item, level=1, drop_level=False), dtype=self.type, if_fq=self.if_fq )
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返回一个基于代码的迭代器
[ "返回一个基于代码的迭代器" ]
python
train
DataBiosphere/toil
src/toil/provisioners/clusterScaler.py
https://github.com/DataBiosphere/toil/blob/a8252277ff814e7bee0971139c2344f88e44b644/src/toil/provisioners/clusterScaler.py#L727-L792
def getNodes(self, preemptable): """ Returns a dictionary mapping node identifiers of preemptable or non-preemptable nodes to NodeInfo objects, one for each node. This method is the definitive source on nodes in cluster, & is responsible for consolidating cluster state between t...
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Returns a dictionary mapping node identifiers of preemptable or non-preemptable nodes to NodeInfo objects, one for each node. This method is the definitive source on nodes in cluster, & is responsible for consolidating cluster state between the provisioner & batch system. :param bool p...
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python
train
pytroll/posttroll
posttroll/publisher.py
https://github.com/pytroll/posttroll/blob/8e811a0544b5182c4a72aed074b2ff8c4324e94d/posttroll/publisher.py#L126-L131
def stop(self): """Stop the publisher. """ self.publish.setsockopt(zmq.LINGER, 1) self.publish.close() return self
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Stop the publisher.
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python
train
luckydonald/pytgbot
code_generation/code_generator.py
https://github.com/luckydonald/pytgbot/blob/67f4b5a1510d4583d40b5477e876b1ef0eb8971b/code_generation/code_generator.py#L26-L89
def func(command, description, link, params_string, returns="On success, the sent Message is returned.", return_type="Message"): """ Live template for pycharm: y = func(command="$cmd$", description="$desc$", link="$lnk$", params_string="$first_param$", returns="$returns$", return_type="$returntype$") "...
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Live template for pycharm: y = func(command="$cmd$", description="$desc$", link="$lnk$", params_string="$first_param$", returns="$returns$", return_type="$returntype$")
[ "Live", "template", "for", "pycharm", ":" ]
python
train
autokey/autokey
lib/autokey/scripting.py
https://github.com/autokey/autokey/blob/35decb72f286ce68cd2a1f09ace8891a520b58d1/lib/autokey/scripting.py#L1256-L1265
def run_script_from_macro(self, args): """ Used internally by AutoKey for phrase macros """ self.__macroArgs = args["args"].split(',') try: self.run_script(args["name"]) except Exception as e: self.set_return_value("{ERROR: %s}" % str(e))
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Used internally by AutoKey for phrase macros
[ "Used", "internally", "by", "AutoKey", "for", "phrase", "macros" ]
python
train
anayjoshi/platypus
platypus/cfg/cfg.py
https://github.com/anayjoshi/platypus/blob/71712f58c99651efbd2e6dfd75a9b1228d42e9ef/platypus/cfg/cfg.py#L292-L295
def add_output_variable(self, var): """Adds the argument variable as one of the output variable""" assert(isinstance(var, Variable)) self.output_variable_list.append(var)
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Adds the argument variable as one of the output variable
[ "Adds", "the", "argument", "variable", "as", "one", "of", "the", "output", "variable" ]
python
train
AndrewIngram/django-extra-views
extra_views/contrib/mixins.py
https://github.com/AndrewIngram/django-extra-views/blob/188e1bf1f15a44d9a599028d020083af9fb43ea7/extra_views/contrib/mixins.py#L120-L131
def get_params_for_field(self, field_name, sort_type=None): """ If sort_type is None - inverse current sort for field, if no sorted - use asc """ if not sort_type: if self.initial_sort == field_name: sort_type = 'desc' if self.initial_sort_type == 'asc' else '...
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If sort_type is None - inverse current sort for field, if no sorted - use asc
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python
valid
Karaage-Cluster/karaage
karaage/plugins/kgapplications/views/project.py
https://github.com/Karaage-Cluster/karaage/blob/2f4c8b4e2d728b3fcbb151160c49000f1c04f5c9/karaage/plugins/kgapplications/views/project.py#L70-L106
def _send_invitation(request, project): """ The logged in project leader OR administrator wants to invite somebody. """ form = forms.InviteUserApplicationForm(request.POST or None) if request.method == 'POST': if form.is_valid(): email = form.cleaned_data['email'] applic...
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The logged in project leader OR administrator wants to invite somebody.
[ "The", "logged", "in", "project", "leader", "OR", "administrator", "wants", "to", "invite", "somebody", "." ]
python
train
sentinel-hub/eo-learn
features/eolearn/features/interpolation.py
https://github.com/sentinel-hub/eo-learn/blob/b8c390b9f553c561612fe9eb64e720611633a035/features/eolearn/features/interpolation.py#L476-L497
def interpolate_data(self, data, times, resampled_times): """ Interpolates data feature :param data: Array in a shape of t x nobs, where nobs = h x w x n :type data: numpy.ndarray :param times: Array of reference times in second relative to the first timestamp :type times: numpy...
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Interpolates data feature :param data: Array in a shape of t x nobs, where nobs = h x w x n :type data: numpy.ndarray :param times: Array of reference times in second relative to the first timestamp :type times: numpy.array :param resampled_times: Array of reference times in sec...
[ "Interpolates", "data", "feature" ]
python
train