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websauna/pyramid_notebook
pyramid_notebook/notebookmanager.py
https://github.com/websauna/pyramid_notebook/blob/8a7ecfa0259810de1a818e4b415a62811a7b077a/pyramid_notebook/notebookmanager.py#L128-L161
def start_notebook(self, name, context: dict, fg=False): """Start new IPython Notebook daemon. :param name: The owner of the Notebook will be *name*. He/she gets a new Notebook content folder created where all files are placed. :param context: Extra context information passed to the started No...
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Start new IPython Notebook daemon. :param name: The owner of the Notebook will be *name*. He/she gets a new Notebook content folder created where all files are placed. :param context: Extra context information passed to the started Notebook. This must contain {context_hash:int} parameter used to ident...
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python
train
Kortemme-Lab/klab
klab/benchmarking/analysis/ddg_monomeric_stability_analysis.py
https://github.com/Kortemme-Lab/klab/blob/6d410ad08f1bd9f7cbbb28d7d946e94fbaaa2b6b/klab/benchmarking/analysis/ddg_monomeric_stability_analysis.py#L1759-L1833
def plot_optimum_prediction_fraction_correct_cutoffs_over_range(self, analysis_set, min_stability_classication_x_cutoff, max_stability_classication_x_cutoff, suppress_plot = False, analysis_file_prefix = None, verbose = True): '''Plots the optimum cutoff for the predictions to maximize the fraction correct metr...
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Plots the optimum cutoff for the predictions to maximize the fraction correct metric over a range of experimental cutoffs. Returns the average scalar corresponding to the best value of fraction correct over a range of cutoff values for the experimental cutoffs.
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python
train
swharden/SWHLab
doc/oldcode/swhlab/core/common.py
https://github.com/swharden/SWHLab/blob/a86c3c65323cec809a4bd4f81919644927094bf5/doc/oldcode/swhlab/core/common.py#L113-L123
def dictAvg(listOfDicts,key,stdErr=False): """Given a list (l) of dicts (d), return AV and SD.""" vals=dictVals(listOfDicts,key) if len(vals) and np.any(vals): av=np.nanmean(vals) er=np.nanstd(vals) if stdErr: er=er/np.sqrt(np.count_nonzero(~np.isnan(er))) else: ...
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Given a list (l) of dicts (d), return AV and SD.
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python
valid
WTRMQDev/lnoise
lnoise/noisetypes.py
https://github.com/WTRMQDev/lnoise/blob/7f8d9faf135025a6aac50131d14a34d1009e8cdd/lnoise/noisetypes.py#L113-L125
def append(self, val): """Append byte string val to buffer If the result exceeds the length of the buffer, behavior depends on whether instance was initialized as strict. In strict mode, a ValueError is raised. In non-strict mode, the buffer is extended as necessary. """ ...
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Append byte string val to buffer If the result exceeds the length of the buffer, behavior depends on whether instance was initialized as strict. In strict mode, a ValueError is raised. In non-strict mode, the buffer is extended as necessary.
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python
train
influxdata/influxdb-python
influxdb/influxdb08/client.py
https://github.com/influxdata/influxdb-python/blob/d5d12499f3755199d5eedd8b363450f1cf4073bd/influxdb/influxdb08/client.py#L321-L331
def write_points_with_precision(self, data, time_precision='s'): """Write to multiple time series names. DEPRECATED. """ warnings.warn( "write_points_with_precision is deprecated, and will be removed " "in future versions. Please use " "``InfluxDBClie...
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Write to multiple time series names. DEPRECATED.
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python
train
mitsei/dlkit
dlkit/json_/authorization/sessions.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/authorization/sessions.py#L3077-L3096
def is_parent_of_vault(self, id_, vault_id): """Tests if an ``Id`` is a direct parent of a vault. arg: id (osid.id.Id): an ``Id`` arg: vault_id (osid.id.Id): the ``Id`` of a vault return: (boolean) - ``true`` if this ``id`` is a parent of ``vault_id,`` ``false`` o...
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Tests if an ``Id`` is a direct parent of a vault. arg: id (osid.id.Id): an ``Id`` arg: vault_id (osid.id.Id): the ``Id`` of a vault return: (boolean) - ``true`` if this ``id`` is a parent of ``vault_id,`` ``false`` otherwise raise: NotFound - ``vault_id`` is not ...
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python
train
bennylope/smartystreets.py
smartystreets/client.py
https://github.com/bennylope/smartystreets.py/blob/f45e37dd52ea7cec8ed43ce2b64724beb6dbbb69/smartystreets/client.py#L16-L34
def validate_args(f): """ Ensures that *args consist of a consistent type :param f: any client method with *args parameter :return: function f """ def wrapper(self, args): arg_types = set([type(arg) for arg in args]) if len(arg_types) > 1: raise TypeError("Mixed inp...
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Ensures that *args consist of a consistent type :param f: any client method with *args parameter :return: function f
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python
train
CalebBell/thermo
thermo/viscosity.py
https://github.com/CalebBell/thermo/blob/3857ed023a3e64fd3039a32d53576c24990ef1c3/thermo/viscosity.py#L1454-L1501
def load_all_methods(self): r'''Method which picks out coefficients for the specified chemical from the various dictionaries and DataFrames storing it. All data is stored as attributes. This method also sets :obj:`Tmin`, :obj:`Tmax`, :obj:`all_methods` and obj:`all_methods_P` as a set of...
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r'''Method which picks out coefficients for the specified chemical from the various dictionaries and DataFrames storing it. All data is stored as attributes. This method also sets :obj:`Tmin`, :obj:`Tmax`, :obj:`all_methods` and obj:`all_methods_P` as a set of methods for which the data ...
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python
valid
python-openxml/python-docx
docx/enum/base.py
https://github.com/python-openxml/python-docx/blob/6756f6cd145511d3eb6d1d188beea391b1ddfd53/docx/enum/base.py#L15-L27
def alias(*aliases): """ Decorating a class with @alias('FOO', 'BAR', ..) allows the class to be referenced by each of the names provided as arguments. """ def decorator(cls): # alias must be set in globals from caller's frame caller = sys._getframe(1) globals_dict = caller.f...
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Decorating a class with @alias('FOO', 'BAR', ..) allows the class to be referenced by each of the names provided as arguments.
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python
train
QuantEcon/QuantEcon.py
quantecon/dle.py
https://github.com/QuantEcon/QuantEcon.py/blob/26a66c552f2a73967d7efb6e1f4b4c4985a12643/quantecon/dle.py#L299-L330
def canonical(self): """ Compute canonical preference representation Uses auxiliary problem of 9.4.2, with the preference shock process reintroduced Calculates pihat, llambdahat and ubhat for the equivalent canonical household technology """ Ac1 = np.hstack((self.deltah,...
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Compute canonical preference representation Uses auxiliary problem of 9.4.2, with the preference shock process reintroduced Calculates pihat, llambdahat and ubhat for the equivalent canonical household technology
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python
train
mgoral/subconvert
src/subconvert/utils/SubFile.py
https://github.com/mgoral/subconvert/blob/59701e5e69ef1ca26ce7d1d766c936664aa2cb32/src/subconvert/utils/SubFile.py#L189-L194
def detectFps(self, movieFile = None, default = 23.976): """Fetch movie FPS from MPlayer output or return given default.""" if movieFile is None: movieFile = self._searchForMovieFile() return File.detectFpsFromMovie(movieFile, default)
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Fetch movie FPS from MPlayer output or return given default.
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python
train
econ-ark/HARK
HARK/ConsumptionSaving/ConsAggShockModel.py
https://github.com/econ-ark/HARK/blob/3d184153a189e618a87c9540df1cd12044039cc5/HARK/ConsumptionSaving/ConsAggShockModel.py#L937-L967
def update(self): ''' Use primitive parameters (and perfect foresight calibrations) to make interest factor and wage rate functions (of capital to labor ratio), as well as discrete approximations to the aggregate shock distributions. Parameters ---------- None ...
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Use primitive parameters (and perfect foresight calibrations) to make interest factor and wage rate functions (of capital to labor ratio), as well as discrete approximations to the aggregate shock distributions. Parameters ---------- None Returns ------- ...
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python
train
manahl/arctic
arctic/store/version_store.py
https://github.com/manahl/arctic/blob/57e110b6e182dbab00e7e214dc26f7d9ec47c120/arctic/store/version_store.py#L338-L383
def read(self, symbol, as_of=None, date_range=None, from_version=None, allow_secondary=None, **kwargs): """ Read data for the named symbol. Returns a VersionedItem object with a data and metdata element (as passed into write). Parameters ---------- symbol : `str` ...
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Read data for the named symbol. Returns a VersionedItem object with a data and metdata element (as passed into write). Parameters ---------- symbol : `str` symbol name for the item as_of : `str` or `int` or `datetime.datetime` Return the data as it was a...
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python
train
pulumi/pulumi
sdk/python/lib/pulumi/resource.py
https://github.com/pulumi/pulumi/blob/95d51efe6ab9a533838b6d83aa240b5f912e72aa/sdk/python/lib/pulumi/resource.py#L321-L330
def export(name: str, value: Any): """ Exports a named stack output. :param str name: The name to assign to this output. :param Any value: The value of this output. """ stack = get_root_resource() if stack is not None: stack.output(name, value)
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Exports a named stack output. :param str name: The name to assign to this output. :param Any value: The value of this output.
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python
train
nickpandolfi/Cyther
cyther/configuration.py
https://github.com/nickpandolfi/Cyther/blob/9fb0bd77af594008aa6ee8af460aa8c953abf5bc/cyther/configuration.py#L333-L353
def generate_configurations(*, guided=False, fresh_start=False, save=False): """ If a config file is found in the standard locations, it will be loaded and the config data would be retuned. If not found, then generate the data on the fly, and return it """ if fresh_start: purge_configs(...
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If a config file is found in the standard locations, it will be loaded and the config data would be retuned. If not found, then generate the data on the fly, and return it
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python
train
linkedin/pyexchange
pyexchange/exchange2010/__init__.py
https://github.com/linkedin/pyexchange/blob/d568f4edd326adb451b915ddf66cf1a37820e3ca/pyexchange/exchange2010/__init__.py#L154-L174
def load_all_details(self): """ This function will execute all the event lookups for known events. This is intended for use when you want to have a completely populated event entry, including Organizer & Attendee details. """ log.debug(u"Loading all details") if self.count > 0: # Now,...
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This function will execute all the event lookups for known events. This is intended for use when you want to have a completely populated event entry, including Organizer & Attendee details.
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python
train
tradenity/python-sdk
tradenity/resources/tax_rate.py
https://github.com/tradenity/python-sdk/blob/d13fbe23f4d6ff22554c6d8d2deaf209371adaf1/tradenity/resources/tax_rate.py#L339-L353
def based_on(self, based_on): """Sets the based_on of this TaxRate. :param based_on: The based_on of this TaxRate. :type: str """ allowed_values = ["shippingAddress", "billingAddress"] if based_on is not None and based_on not in allowed_values: raise ValueEr...
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Sets the based_on of this TaxRate. :param based_on: The based_on of this TaxRate. :type: str
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python
train
opinkerfi/nago
nago/settings/__init__.py
https://github.com/opinkerfi/nago/blob/85e1bdd1de0122f56868a483e7599e1b36a439b0/nago/settings/__init__.py#L96-L108
def generate_configfile(cfg_file,defaults=defaults): """ Write a new nago.ini config file from the defaults. Arguments: cfg_file -- File that is written to like /etc/nago/nago.ini defaults -- Dictionary with default values to use """ # Create a directory if needed and write an empty f...
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Write a new nago.ini config file from the defaults. Arguments: cfg_file -- File that is written to like /etc/nago/nago.ini defaults -- Dictionary with default values to use
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python
train
gwastro/pycbc
pycbc/inference/sampler/base_mcmc.py
https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/inference/sampler/base_mcmc.py#L241-L249
def niterations(self): """The current number of iterations.""" itercounter = self._itercounter if itercounter is None: itercounter = 0 lastclear = self._lastclear if lastclear is None: lastclear = 0 return itercounter + lastclear
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The current number of iterations.
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python
train
joeblackwaslike/pricing
pricing/babel_numbers.py
https://github.com/joeblackwaslike/pricing/blob/be988b0851b4313af81f1db475bc33248700e39c/pricing/babel_numbers.py#L185-L259
def apply( self, value, locale, currency=None, currency_digits=True, decimal_quantization=True): """Renders into a string a number following the defined pattern. Forced decimal quantization is active by default so we'll produce a number string that is strictly following C...
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Renders into a string a number following the defined pattern. Forced decimal quantization is active by default so we'll produce a number string that is strictly following CLDR pattern definitions.
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python
test
numenta/nupic
src/nupic/algorithms/sdr_classifier.py
https://github.com/numenta/nupic/blob/5922fafffdccc8812e72b3324965ad2f7d4bbdad/src/nupic/algorithms/sdr_classifier.py#L478-L500
def _calculateError(self, recordNum, bucketIdxList): """ Calculate error signal :param bucketIdxList: list of encoder buckets :return: dict containing error. The key is the number of steps The value is a numpy array of error at the output layer """ error = dict() targetDist = ...
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Calculate error signal :param bucketIdxList: list of encoder buckets :return: dict containing error. The key is the number of steps The value is a numpy array of error at the output layer
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python
valid
pytroll/satpy
satpy/composites/viirs.py
https://github.com/pytroll/satpy/blob/1f21d20ac686b745fb0da9b4030d139893e066dd/satpy/composites/viirs.py#L594-L819
def local_histogram_equalization(data, mask_to_equalize, valid_data_mask=None, number_of_bins=1000, std_mult_cutoff=3.0, do_zerotoone_normalization=True, local_radius_px=300, clip_limit=60...
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Equalize the provided data (in the mask_to_equalize) using adaptive histogram equalization. tiles of width/height (2 * local_radius_px + 1) will be calculated and results for each pixel will be bilinerarly interpolated from the nearest 4 tiles when pixels fall near the edge of the image (there is no adjacent t...
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python
train
HttpRunner/HttpRunner
httprunner/cli.py
https://github.com/HttpRunner/HttpRunner/blob/f259551bf9c8ba905eae5c1afcf2efea20ae0871/httprunner/cli.py#L91-L180
def main_locust(): """ Performance test with locust: parse command line options and run commands. """ # monkey patch ssl at beginning to avoid RecursionError when running locust. from gevent import monkey; monkey.patch_ssl() import multiprocessing import sys from httprunner import logger ...
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Performance test with locust: parse command line options and run commands.
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python
train
Aloomaio/python-sdk
alooma_pysdk/alooma_pysdk.py
https://github.com/Aloomaio/python-sdk/blob/e6e7322d0b23d90b1ff0320e9a9c431c82c0c277/alooma_pysdk/alooma_pysdk.py#L274-L287
def _notify(self, log_level, message): """ Calls the callback function and logs messages using the PySDK logger :param log_level: An integer representing the log level, as specified in the Python `logging` library :param message: The actual message to be sent ...
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Calls the callback function and logs messages using the PySDK logger :param log_level: An integer representing the log level, as specified in the Python `logging` library :param message: The actual message to be sent to the logger and the `callback` ...
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python
train
open-mmlab/mmcv
mmcv/runner/priority.py
https://github.com/open-mmlab/mmcv/blob/0d77f61450aab4dde8b8585a577cc496acb95d7f/mmcv/runner/priority.py#L35-L53
def get_priority(priority): """Get priority value. Args: priority (int or str or :obj:`Priority`): Priority. Returns: int: The priority value. """ if isinstance(priority, int): if priority < 0 or priority > 100: raise ValueError('priority must be between 0 and 1...
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Get priority value. Args: priority (int or str or :obj:`Priority`): Priority. Returns: int: The priority value.
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python
test
centralniak/py-raildriver
raildriver/library.py
https://github.com/centralniak/py-raildriver/blob/c7f5f551e0436451b9507fc63a62e49a229282b9/raildriver/library.py#L134-L141
def get_current_time(self): """ Get current time :return: datetime.time """ hms = [int(self.get_current_controller_value(i)) for i in range(406, 409)] return datetime.time(*hms)
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Get current time :return: datetime.time
[ "Get", "current", "time" ]
python
train
10gen/mongo-orchestration
mongo_orchestration/replica_sets.py
https://github.com/10gen/mongo-orchestration/blob/81fd2224205922ea2178b08190b53a33aec47261/mongo_orchestration/replica_sets.py#L522-L541
def wait_while_reachable(self, servers, timeout=60): """wait while all servers be reachable Args: servers - list of servers """ t_start = time.time() while True: try: for server in servers: # TODO: use state code to chec...
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wait while all servers be reachable Args: servers - list of servers
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python
train
blockstack/blockstack-core
blockstack/blockstackd.py
https://github.com/blockstack/blockstack-core/blob/1dcfdd39b152d29ce13e736a6a1a0981401a0505/blockstack/blockstackd.py#L1124-L1172
def rpc_getinfo(self, **con_info): """ Get information from the running server: * last_block_seen: the last block height seen * consensus: the consensus hash for that block * server_version: the server version * last_block_processed: the last block processed * ser...
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Get information from the running server: * last_block_seen: the last block height seen * consensus: the consensus hash for that block * server_version: the server version * last_block_processed: the last block processed * server_alive: True * [optional] zonefile_count: th...
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python
train
karan/TPB
tpb/utils.py
https://github.com/karan/TPB/blob/f424a73a10d4bcf4e363d7e7e8cb915a3a057671/tpb/utils.py#L56-L63
def _segment(cls, segment): """ Returns a property capable of setting and getting a segment. """ return property( fget=lambda x: cls._get_segment(x, segment), fset=lambda x, v: cls._set_segment(x, segment, v), )
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Returns a property capable of setting and getting a segment.
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python
train
ZELLMECHANIK-DRESDEN/dclab
dclab/external/statsmodels/nonparametric/_kernel_base.py
https://github.com/ZELLMECHANIK-DRESDEN/dclab/blob/79002c4356e7020c2ba73ab0a3819c9abd4affec/dclab/external/statsmodels/nonparametric/_kernel_base.py#L58-L66
def _set_defaults(self, defaults): """Sets the default values for the efficient estimation""" self.n_res = defaults.n_res self.n_sub = defaults.n_sub self.randomize = defaults.randomize self.return_median = defaults.return_median self.efficient = defaults.efficient ...
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Sets the default values for the efficient estimation
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python
train
Miserlou/Zappa
zappa/cli.py
https://github.com/Miserlou/Zappa/blob/3ccf7490a8d8b8fa74a61ee39bf44234f3567739/zappa/cli.py#L2744-L2757
def shamelessly_promote(): """ Shamelessly promote our little community. """ click.echo("Need " + click.style("help", fg='green', bold=True) + "? Found a " + click.style("bug", fg='green', bold=True) + "? Let us " + click.style("know", fg='green', bold=True) + "! :D") ...
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Shamelessly promote our little community.
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python
train
ConsenSys/mythril-classic
mythril/ethereum/interface/leveldb/accountindexing.py
https://github.com/ConsenSys/mythril-classic/blob/27af71c34b2ce94f4fae5613ec457f93df1a8f56/mythril/ethereum/interface/leveldb/accountindexing.py#L111-L177
def updateIfNeeded(self): """update address index.""" headBlock = self.db.reader._get_head_block() if headBlock is not None: # avoid restarting search if head block is same & we already initialized # this is required for fastSync handling if self.lastBlock is ...
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update address index.
[ "update", "address", "index", "." ]
python
train
pyQode/pyqode.core
pyqode/core/widgets/splittable_tab_widget.py
https://github.com/pyQode/pyqode.core/blob/a99ec6cd22d519394f613309412f8329dc4e90cb/pyqode/core/widgets/splittable_tab_widget.py#L993-L1003
def get_filter(cls, mimetype): """ Returns a filter string for the file dialog. The filter is based on the mime type. :param mimetype: path from which the filter must be derived. :return: Filter string """ filters = ' '.join( ['*%s' % ext for ext in m...
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Returns a filter string for the file dialog. The filter is based on the mime type. :param mimetype: path from which the filter must be derived. :return: Filter string
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python
train
tjcsl/cslbot
cslbot/helpers/handler.py
https://github.com/tjcsl/cslbot/blob/aebe07be47141f61d7c180706bddfb707f19b2b5/cslbot/helpers/handler.py#L259-L285
def do_part(self, cmdargs, nick, target, msgtype, send, c): """Leaves a channel. Prevent user from leaving the primary channel. """ channel = self.config['core']['channel'] botnick = self.config['core']['nick'] if not cmdargs: # don't leave the primary chann...
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Leaves a channel. Prevent user from leaving the primary channel.
[ "Leaves", "a", "channel", "." ]
python
train
Duke-GCB/DukeDSClient
ddsc/core/fileuploader.py
https://github.com/Duke-GCB/DukeDSClient/blob/117f68fb9bae82e4c81ea487ad5d61ac350f3726/ddsc/core/fileuploader.py#L126-L138
def create_upload(self, project_id, path_data, hash_data, remote_filename=None, storage_provider_id=None): """ Create a chunked upload id to pass to create_file_chunk_url to create upload urls. :param project_id: str: uuid of the project :param path_data: PathData: holds file system data...
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Create a chunked upload id to pass to create_file_chunk_url to create upload urls. :param project_id: str: uuid of the project :param path_data: PathData: holds file system data about the file we are uploading :param hash_data: HashData: contains hash alg and value for the file we are uploading ...
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python
train
dstufft/storages
storages/core.py
https://github.com/dstufft/storages/blob/0d893afc1db32cd83eaf8e2ad4ed51b37933d5f0/storages/core.py#L79-L94
def get_available_name(self, name): """ Returns a filename that's free on the target storage system, and available for new content to be written to. """ dir_name, file_name = os.path.split(name) file_root, file_ext = os.path.splitext(file_name) # If the filename a...
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Returns a filename that's free on the target storage system, and available for new content to be written to.
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python
train
edibledinos/pwnypack
pwnypack/bytecode.py
https://github.com/edibledinos/pwnypack/blob/e0a5a8e6ef3f4f1f7e1b91ee379711f4a49cb0e6/pwnypack/bytecode.py#L574-L587
def from_function(cls, f, *args, **kwargs): """ Create a new instance from a function. Gets the code object from the function and passes it and any other specified parameters to :meth:`from_code`. Arguments: f(function): The function to get the code object from. ...
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Create a new instance from a function. Gets the code object from the function and passes it and any other specified parameters to :meth:`from_code`. Arguments: f(function): The function to get the code object from. Returns: CodeObject: A new :class:`CodeObject` ...
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python
train
juicer/juicer
juicer/utils/__init__.py
https://github.com/juicer/juicer/blob/0c9f0fd59e293d45df6b46e81f675d33221c600d/juicer/utils/__init__.py#L337-L352
def find_pattern(search_base, pattern='*.rpm'): """ `search_base` - The directory to begin walking down. `pattern` - File pattern to match for. This is a generator which yields the full path to files (one at a time) which match the given glob (`pattern`). """ # Stolen from http://rosettacod...
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`search_base` - The directory to begin walking down. `pattern` - File pattern to match for. This is a generator which yields the full path to files (one at a time) which match the given glob (`pattern`).
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python
train
InspectorMustache/base16-builder-python
pybase16_builder/updater.py
https://github.com/InspectorMustache/base16-builder-python/blob/586f1f87ee9f70696ab19c542af6ef55c6548a2e/pybase16_builder/updater.py#L34-L57
def git_clone(git_url, path): """Clone git repository at $git_url to $path.""" if os.path.exists(os.path.join(path, '.git')): # get rid of local repo if it already exists shutil.rmtree(path) os.makedirs(path, exist_ok=True) print('Start cloning from {}…'.format(git_url)) git_proc = ...
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Clone git repository at $git_url to $path.
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python
train
NiklasRosenstein-Python/nr-deprecated
nr/ast/dynamic_eval.py
https://github.com/NiklasRosenstein-Python/nr-deprecated/blob/f9f8b89ea1b084841a8ab65784eaf68852686b2a/nr/ast/dynamic_eval.py#L114-L123
def __get_subscript(self, name, ctx=None): """ Returns `<data_var>["<name>"]` """ assert isinstance(name, string_types), name return ast.Subscript( value=ast.Name(id=self.data_var, ctx=ast.Load()), slice=ast.Index(value=ast.Str(s=name)), ctx=ctx)
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Returns `<data_var>["<name>"]`
[ "Returns", "<data_var", ">", "[", "<name", ">", "]" ]
python
train
hyperledger/indy-plenum
plenum/common/signer_did.py
https://github.com/hyperledger/indy-plenum/blob/dcd144e238af7f17a869ffc9412f13dc488b7020/plenum/common/signer_did.py#L122-L129
def sign(self, msg: Dict) -> Dict: """ Return a signature for the given message. """ ser = serialize_msg_for_signing(msg, topLevelKeysToIgnore=[f.SIG.nm]) bsig = self.naclSigner.signature(ser) sig = base58.b58encode(bsig).decode("utf-8") return sig
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Return a signature for the given message.
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python
train
connectordb/connectordb-python
connectordb/_websocket.py
https://github.com/connectordb/connectordb-python/blob/2092b0cb30898139a247176bcf433d5a4abde7cb/connectordb/_websocket.py#L69-L86
def setauth(self,basic_auth): """ setauth can be used during runtime to make sure that authentication is reset. it can be used when changing passwords/apikeys to make sure reconnects succeed """ self.headers = [] # If we have auth if basic_auth is not None: # we use a...
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setauth can be used during runtime to make sure that authentication is reset. it can be used when changing passwords/apikeys to make sure reconnects succeed
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python
test
pypa/pipenv
pipenv/vendor/pexpect/screen.py
https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/pexpect/screen.py#L339-L345
def scroll_constrain (self): '''This keeps the scroll region within the screen region.''' if self.scroll_row_start <= 0: self.scroll_row_start = 1 if self.scroll_row_end > self.rows: self.scroll_row_end = self.rows
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This keeps the scroll region within the screen region.
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python
train
pydata/xarray
xarray/coding/variables.py
https://github.com/pydata/xarray/blob/6d93a95d05bdbfc33fff24064f67d29dd891ab58/xarray/coding/variables.py#L116-L125
def pop_to(source, dest, key, name=None): """ A convenience function which pops a key k from source to dest. None values are not passed on. If k already exists in dest an error is raised. """ value = source.pop(key, None) if value is not None: safe_setitem(dest, key, value, name=nam...
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A convenience function which pops a key k from source to dest. None values are not passed on. If k already exists in dest an error is raised.
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python
train
DataBiosphere/toil
src/toil/batchSystems/lsfHelper.py
https://github.com/DataBiosphere/toil/blob/a8252277ff814e7bee0971139c2344f88e44b644/src/toil/batchSystems/lsfHelper.py#L108-L117
def apply_lsadmin(fn): """ apply fn to each line of lsadmin, returning the result """ cmd = ["lsadmin", "showconf", "lim"] try: output = subprocess.check_output(cmd).decode('utf-8') except: return None return fn(output.split("\n"))
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apply fn to each line of lsadmin, returning the result
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python
train
watchforstock/evohome-client
evohomeclient2/__init__.py
https://github.com/watchforstock/evohome-client/blob/f1cb9273e97946d79c0651f00a218abbf7ada53a/evohomeclient2/__init__.py#L236-L243
def gateway(self): """Return the detail of the gateway.""" url = 'https://tccna.honeywell.com/WebAPI/emea/api/v1/gateway' response = requests.get(url, headers=self._headers()) response.raise_for_status() return response.json()
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Return the detail of the gateway.
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python
train
greenbone/ospd
ospd/misc.py
https://github.com/greenbone/ospd/blob/cef773166b15a19c17764721d3fe404fa0e107bf/ospd/misc.py#L565-L594
def target_to_list(target): """ Attempt to return a list of single hosts from a target string. """ # Is it an IPv4 address ? new_list = target_to_ipv4(target) # Is it an IPv6 address ? if not new_list: new_list = target_to_ipv6(target) # Is it an IPv4 CIDR ? if not new_list: ...
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Attempt to return a list of single hosts from a target string.
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python
train
glitchassassin/lackey
lackey/RegionMatching.py
https://github.com/glitchassassin/lackey/blob/7adadfacd7f45d81186710be992f5668b15399fe/lackey/RegionMatching.py#L1506-L1515
def getEvents(self): """ Returns a list of all events that have occurred. Empties the internal queue. """ caught_events = self._observer.caught_events self._observer.caught_events = [] for event in caught_events: self._observer.activate_event(event["name"]) ...
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Returns a list of all events that have occurred. Empties the internal queue.
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python
train
wesm/feather
cpp/build-support/cpplint.py
https://github.com/wesm/feather/blob/99267b30461c46b9e437f95e1d9338a92a854270/cpp/build-support/cpplint.py#L6048-L6121
def ProcessConfigOverrides(filename): """ Loads the configuration files and processes the config overrides. Args: filename: The name of the file being processed by the linter. Returns: False if the current |filename| should not be processed further. """ abs_filename = os.path.abspath(filename) cf...
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Loads the configuration files and processes the config overrides. Args: filename: The name of the file being processed by the linter. Returns: False if the current |filename| should not be processed further.
[ "Loads", "the", "configuration", "files", "and", "processes", "the", "config", "overrides", "." ]
python
train
chemlab/chemlab
chemlab/utils/pbc.py
https://github.com/chemlab/chemlab/blob/c8730966316d101e24f39ac3b96b51282aba0abe/chemlab/utils/pbc.py#L123-L134
def geometric_center(coords, periodic): '''Geometric center taking into account periodic boundaries''' max_vals = periodic theta = 2 * np.pi * (coords / max_vals) eps = np.cos(theta) * max_vals / (2 * np.pi) zeta = np.sin(theta) * max_vals / (2 * np.pi) eps_avg = eps.sum(axis=0) zeta_avg = ...
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Geometric center taking into account periodic boundaries
[ "Geometric", "center", "taking", "into", "account", "periodic", "boundaries" ]
python
train
gsi-upm/soil
soil/history.py
https://github.com/gsi-upm/soil/blob/a3ea434f237f039c3cadbc2e0a83ae626d77b818/soil/history.py#L79-L90
def save_record(self, agent_id, t_step, key, value): ''' Save a collection of records to the database. Database writes are cached. ''' value = self.convert(key, value) self._tups.append(Record(agent_id=agent_id, t_step=t_step, ...
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Save a collection of records to the database. Database writes are cached.
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python
train
aiogram/aiogram
aiogram/bot/bot.py
https://github.com/aiogram/aiogram/blob/2af930149ce2482547721e2c8755c10307295e48/aiogram/bot/bot.py#L1325-L1346
async def set_chat_sticker_set(self, chat_id: typing.Union[base.Integer, base.String], sticker_set_name: base.String) -> base.Boolean: """ Use this method to set a new group sticker set for a supergroup. The bot must be an administrator in the chat for this to ...
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Use this method to set a new group sticker set for a supergroup. The bot must be an administrator in the chat for this to work and must have the appropriate admin rights. Use the field can_set_sticker_set optionally returned in getChat requests to check if the bot can use this method. ...
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python
train
raiden-network/raiden
raiden/network/rpc/client.py
https://github.com/raiden-network/raiden/blob/407ba15c72074e9de88771d6b9661ff4dc36bef5/raiden/network/rpc/client.py#L232-L262
def dependencies_order_of_build(target_contract, dependencies_map): """ Return an ordered list of contracts that is sufficient to successfully deploy the target contract. Note: This function assumes that the `dependencies_map` is an acyclic graph. """ if not dependencies_map: return...
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Return an ordered list of contracts that is sufficient to successfully deploy the target contract. Note: This function assumes that the `dependencies_map` is an acyclic graph.
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python
train
larsyencken/proj
proj/__init__.py
https://github.com/larsyencken/proj/blob/44fd72aeb9bbf72046d81c4e9e4306a23335dc0a/proj/__init__.py#L145-L161
def restore(folder): "Restore a project from the archive." if os.path.isdir(folder): bail('a folder of the same name already exists!') pattern = os.path.join(PROJ_ARCHIVE, '*', '*', folder) matches = glob.glob(pattern) if not matches: bail('no project matches: ' + folder) if le...
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Restore a project from the archive.
[ "Restore", "a", "project", "from", "the", "archive", "." ]
python
test
vecnet/vecnet.simulation
vecnet/simulation/__init__.py
https://github.com/vecnet/vecnet.simulation/blob/3a4b3df7b12418c6fa8a7d9cd49656a1c031fc0e/vecnet/simulation/__init__.py#L32-L39
def read_json_file(cls, path): """ Read an instance from a JSON-formatted file. :return: A new instance """ with open(path, 'r') as f: return cls.from_dict(json.load(f))
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Read an instance from a JSON-formatted file. :return: A new instance
[ "Read", "an", "instance", "from", "a", "JSON", "-", "formatted", "file", "." ]
python
train
pybel/pybel
src/pybel/parser/parse_bel.py
https://github.com/pybel/pybel/blob/c8a7a1bdae4c475fa2a8c77f3a9a5f6d79556ca0/src/pybel/parser/parse_bel.py#L743-L772
def _handle_relation(self, tokens: ParseResults) -> str: """Handle a relation.""" subject_node_dsl = self.ensure_node(tokens[SUBJECT]) object_node_dsl = self.ensure_node(tokens[OBJECT]) subject_modifier = modifier_po_to_dict(tokens[SUBJECT]) object_modifier = modifier_po_to_dict...
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Handle a relation.
[ "Handle", "a", "relation", "." ]
python
train
NJDFan/ctypes-bitfield
bitfield/walk.py
https://github.com/NJDFan/ctypes-bitfield/blob/ae76b1dcfef7ecc90bd1900735b94ddee41a6376/bitfield/walk.py#L361-L380
def _createbound(obj): """Create a new BoundNode representing a given object.""" # Start by allowing objects to define custom unbound reference hooks try: kls = obj._unboundreference_() except AttributeError: kls = type(obj) unbound = _createunbound(kls) def valueget(): ...
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Create a new BoundNode representing a given object.
[ "Create", "a", "new", "BoundNode", "representing", "a", "given", "object", "." ]
python
train
pygobject/pgi
pgi/overrides/Gtk.py
https://github.com/pygobject/pgi/blob/2090435df6241a15ec2a78379a36b738b728652c/pgi/overrides/Gtk.py#L257-L278
def insert_text(self, text, position): """insert_text(self, text, position) :param new_text: the text to append :type new_text: :obj:`str` :param position: location of the position text will be inserted at :type position: :obj:`int` :returns: ...
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insert_text(self, text, position) :param new_text: the text to append :type new_text: :obj:`str` :param position: location of the position text will be inserted at :type position: :obj:`int` :returns: location of the position text will be in...
[ "insert_text", "(", "self", "text", "position", ")" ]
python
train
brocade/pynos
pynos/versions/ver_6/ver_6_0_1/yang/tailf_confd_monitoring.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/tailf_confd_monitoring.py#L201-L213
def confd_state_netconf_listen_tcp_port(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") confd_state = ET.SubElement(config, "confd-state", xmlns="http://tail-f.com/yang/confd-monitoring") netconf = ET.SubElement(confd_state, "netconf") listen = E...
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Auto Generated Code
[ "Auto", "Generated", "Code" ]
python
train
ClericPy/torequests
torequests/dummy.py
https://github.com/ClericPy/torequests/blob/1793261688d7a47e1c3a0830d83f8552f5e3e5d9/torequests/dummy.py#L235-L262
def submit(self, coro, callback=None): """Submit a coro as NewTask to self.loop without loop.frequncy control. :: from torequests.dummy import Loop import asyncio loop = Loop() async def test(i): result = await asyncio.sleep(1) ...
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Submit a coro as NewTask to self.loop without loop.frequncy control. :: from torequests.dummy import Loop import asyncio loop = Loop() async def test(i): result = await asyncio.sleep(1) return (loop.frequency, i) cor...
[ "Submit", "a", "coro", "as", "NewTask", "to", "self", ".", "loop", "without", "loop", ".", "frequncy", "control", "." ]
python
train
jbarlow83/OCRmyPDF
src/ocrmypdf/pdfinfo/__init__.py
https://github.com/jbarlow83/OCRmyPDF/blob/79c84eefa353632a3d7ccddbd398c6678c1c1777/src/ocrmypdf/pdfinfo/__init__.py#L401-L426
def _find_regular_images(container, contentsinfo): """Find images stored in the container's /Resources /XObject Usually the container is a page, but it could also be a Form XObject that contains images. Generates images with their DPI at time of drawing. """ for pdfimage, xobj in _image_xobje...
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Find images stored in the container's /Resources /XObject Usually the container is a page, but it could also be a Form XObject that contains images. Generates images with their DPI at time of drawing.
[ "Find", "images", "stored", "in", "the", "container", "s", "/", "Resources", "/", "XObject" ]
python
train
cloud9ers/gurumate
environment/share/doc/ipython/examples/parallel/dagdeps.py
https://github.com/cloud9ers/gurumate/blob/075dc74d1ee62a8c6b7a8bf2b271364f01629d1e/environment/share/doc/ipython/examples/parallel/dagdeps.py#L48-L54
def make_bintree(levels): """Make a symmetrical binary tree with @levels""" G = nx.DiGraph() root = '0' G.add_node(root) add_children(G, root, levels, 2) return G
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Make a symmetrical binary tree with @levels
[ "Make", "a", "symmetrical", "binary", "tree", "with" ]
python
test
mwhooker/jones
jones/jones.py
https://github.com/mwhooker/jones/blob/121e89572ca063f456b8e94cbb8cbee26c307a8f/jones/jones.py#L65-L68
def _set(self, data, version): """serialize and set data to self.path.""" self.zk.set(self.path, json.dumps(data), version)
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serialize and set data to self.path.
[ "serialize", "and", "set", "data", "to", "self", ".", "path", "." ]
python
train
SmokinCaterpillar/pypet
pypet/naturalnaming.py
https://github.com/SmokinCaterpillar/pypet/blob/97ad3e80d46dbdea02deeb98ea41f05a19565826/pypet/naturalnaming.py#L3380-L3416
def f_load(self, recursive=True, load_data=pypetconstants.LOAD_DATA, max_depth=None): """Loads a group from disk. :param recursive: Default is ``True``. Whether recursively all nodes below the current node should be loaded, too. Note that links are ne...
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Loads a group from disk. :param recursive: Default is ``True``. Whether recursively all nodes below the current node should be loaded, too. Note that links are never evaluated recursively. Only the linked node will be loaded if it does not exist in the tree, yet...
[ "Loads", "a", "group", "from", "disk", "." ]
python
test
chrlie/shorten
shorten/__init__.py
https://github.com/chrlie/shorten/blob/fb762a199979aefaa28c88fa035e88ea8ce4d639/shorten/__init__.py#L23-L42
def make_store(name, min_length=4, **kwargs): """\ Creates a store with a reasonable keygen. .. deprecated:: 2.0.0 Instantiate stores directly e.g. ``shorten.MemoryStore(min_length=4)`` """ if name not in stores: raise ValueError('valid stores are {0}'.format(', '.join(stores))) if n...
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\ Creates a store with a reasonable keygen. .. deprecated:: 2.0.0 Instantiate stores directly e.g. ``shorten.MemoryStore(min_length=4)``
[ "\\", "Creates", "a", "store", "with", "a", "reasonable", "keygen", "." ]
python
train
jlmadurga/permabots
permabots/views/api/handler.py
https://github.com/jlmadurga/permabots/blob/781a91702529a23fe7bc2aa84c5d88e961412466/permabots/views/api/handler.py#L332-L341
def get(self, request, bot_id, id, format=None): """ Get list of source state of a handler --- serializer: StateSerializer responseMessages: - code: 401 message: Not authenticated """ return super(SourceStateList, self).get(request, bot_i...
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Get list of source state of a handler --- serializer: StateSerializer responseMessages: - code: 401 message: Not authenticated
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python
train
rossant/ipymd
ipymd/core/format_manager.py
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L166-L181
def load(self, file, name=None): """Load a file. The format name can be specified explicitly or inferred from the file extension.""" if name is None: name = self.format_from_extension(op.splitext(file)[1]) file_format = self.file_type(name) if file_format == 'text': ...
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Load a file. The format name can be specified explicitly or inferred from the file extension.
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python
train
inveniosoftware/invenio-oauthclient
invenio_oauthclient/contrib/cern.py
https://github.com/inveniosoftware/invenio-oauthclient/blob/2500dc6935738107617aeade79e050d7608004bb/invenio_oauthclient/contrib/cern.py#L219-L229
def fetch_extra_data(resource): """Return a dict with extra data retrieved from cern oauth.""" person_id = resource.get('PersonID', [None])[0] identity_class = resource.get('IdentityClass', [None])[0] department = resource.get('Department', [None])[0] return dict( person_id=person_id, ...
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Return a dict with extra data retrieved from cern oauth.
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python
train
koordinates/python-client
koordinates/sources.py
https://github.com/koordinates/python-client/blob/f3dc7cd164f5a9499b2454cd1d4516e9d4b3c252/koordinates/sources.py#L300-L307
def get_log_lines(self, source_id, scan_id): """ Get the log text for a scan object :rtype: Iterator over log lines. """ target_url = self.client.get_url('SCAN', 'GET', 'log', {'source_id': source_id, 'scan_id': scan_id}) r = self.client.request('GET', target_url, headers...
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Get the log text for a scan object :rtype: Iterator over log lines.
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python
train
saltstack/salt
salt/modules/ps.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/ps.py#L50-L59
def _get_proc_cmdline(proc): ''' Returns the cmdline of a Process instance. It's backward compatible with < 2.0 versions of psutil. ''' try: return salt.utils.data.decode(proc.cmdline() if PSUTIL2 else proc.cmdline) except (psutil.NoSuchProcess, psutil.AccessDenied): return []
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Returns the cmdline of a Process instance. It's backward compatible with < 2.0 versions of psutil.
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python
train
johntruckenbrodt/spatialist
spatialist/auxil.py
https://github.com/johntruckenbrodt/spatialist/blob/007f49296a156de8d7168ad235b5a5b8e8d3633d/spatialist/auxil.py#L137-L171
def gdalbuildvrt(src, dst, options=None, void=True): """ a simple wrapper for :osgeo:func:`gdal.BuildVRT` Parameters ---------- src: str, list, :osgeo:class:`ogr.DataSource` or :osgeo:class:`gdal.Dataset` the input data set(s) dst: str the output data set options: dict ...
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a simple wrapper for :osgeo:func:`gdal.BuildVRT` Parameters ---------- src: str, list, :osgeo:class:`ogr.DataSource` or :osgeo:class:`gdal.Dataset` the input data set(s) dst: str the output data set options: dict additional parameters passed to gdal.BuildVRT; see :osgeo:func...
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python
train
AASHE/python-membersuite-api-client
membersuite_api_client/client.py
https://github.com/AASHE/python-membersuite-api-client/blob/221f5ed8bc7d4424237a4669c5af9edc11819ee9/membersuite_api_client/client.py#L45-L63
def request_session(self): """ Performs initial request to initialize session and get session id necessary to construct all future requests. :return: Session ID to be placed in header of all other requests. """ concierge_request_header = self.construct_concierge_header( ...
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Performs initial request to initialize session and get session id necessary to construct all future requests. :return: Session ID to be placed in header of all other requests.
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python
train
notanumber/xapian-haystack
xapian_backend.py
https://github.com/notanumber/xapian-haystack/blob/2247b23d3cb6322ce477d45f84d52da47a940348/xapian_backend.py#L1009-L1101
def _do_date_facets(results, date_facets): """ Private method that facets a document by date ranges Required arguments: `results` -- A list SearchResults to facet `date_facets` -- A dictionary containing facet parameters: {'field': {'start_date': ..., 'en...
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Private method that facets a document by date ranges Required arguments: `results` -- A list SearchResults to facet `date_facets` -- A dictionary containing facet parameters: {'field': {'start_date': ..., 'end_date': ...: 'gap_by': '...', 'gap_amount': n}} ...
[ "Private", "method", "that", "facets", "a", "document", "by", "date", "ranges" ]
python
train
LuminosoInsight/luminoso-api-client-python
luminoso_api/v4_client.py
https://github.com/LuminosoInsight/luminoso-api-client-python/blob/3bedf2a454aee39214c11fbf556ead3eecc27881/luminoso_api/v4_client.py#L360-L387
def change_path(self, path): """ Return a new LuminosoClient for a subpath of this one. For example, you might want to start with a LuminosoClient for `https://analytics.luminoso.com/api/v4/`, then get a new one for `https://analytics.luminoso.com/api/v4/projects/myaccount/mypro...
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Return a new LuminosoClient for a subpath of this one. For example, you might want to start with a LuminosoClient for `https://analytics.luminoso.com/api/v4/`, then get a new one for `https://analytics.luminoso.com/api/v4/projects/myaccount/myprojectid`. You accomplish that with the fol...
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python
test
saltstack/salt
salt/modules/localemod.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/localemod.py#L166-L228
def set_locale(locale): ''' Sets the current system locale CLI Example: .. code-block:: bash salt '*' locale.set_locale 'en_US.UTF-8' ''' lc_ctl = salt.utils.systemd.booted(__context__) # localectl on SLE12 is installed but the integration is broken -- config is rewritten by YaST2...
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Sets the current system locale CLI Example: .. code-block:: bash salt '*' locale.set_locale 'en_US.UTF-8'
[ "Sets", "the", "current", "system", "locale" ]
python
train
WhyNotHugo/django-afip
django_afip/models.py
https://github.com/WhyNotHugo/django-afip/blob/5fb73213f1fe86ca52b501ffd0737911ef26ddb3/django_afip/models.py#L367-L371
def get_ticket(self, service): """Return an existing AuthTicket for a given service.""" return self.auth_tickets \ .filter(expires__gt=datetime.now(timezone.utc), service=service) \ .last()
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Return an existing AuthTicket for a given service.
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python
train
davidwtbuxton/notrequests
notrequests.py
https://github.com/davidwtbuxton/notrequests/blob/e48ee6107a58c2f373c33f78e3302608edeba7f3/notrequests.py#L193-L209
def detect_encoding(value): """Returns the character encoding for a JSON string.""" # https://tools.ietf.org/html/rfc4627#section-3 if six.PY2: null_pattern = tuple(bool(ord(char)) for char in value[:4]) else: null_pattern = tuple(bool(char) for char in value[:4]) encodings = { ...
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Returns the character encoding for a JSON string.
[ "Returns", "the", "character", "encoding", "for", "a", "JSON", "string", "." ]
python
train
tensorflow/tensor2tensor
tensor2tensor/layers/common_attention.py
https://github.com/tensorflow/tensor2tensor/blob/272500b6efe353aeb638d2745ed56e519462ca31/tensor2tensor/layers/common_attention.py#L4302-L4365
def multihead_attention_2d(query_antecedent, memory_antecedent, total_key_depth, total_value_depth, output_depth, num_heads, attention_type="local_attention_2...
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2d Multihead scaled-dot-product attention with inp/output transformations. Args: query_antecedent: a Tensor with shape [batch, h, w, depth_k] memory_antecedent: a Tensor with shape [batch, h, w, depth_k] total_key_depth: an integer total_value_depth: an integer output_depth: an integer num_he...
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python
train
Alignak-monitoring-contrib/alignak-backend-client
alignak_backend_client/client.py
https://github.com/Alignak-monitoring-contrib/alignak-backend-client/blob/1e21f6ce703e66984d1f9b20fe7866460ab50b39/alignak_backend_client/client.py#L674-L694
def delete(self, endpoint, headers): """ Method to delete an item or all items headers['If-Match'] must contain the _etag identifier of the element to delete :param endpoint: endpoint (API URL) :type endpoint: str :param headers: headers (example: Content-Type) ...
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Method to delete an item or all items headers['If-Match'] must contain the _etag identifier of the element to delete :param endpoint: endpoint (API URL) :type endpoint: str :param headers: headers (example: Content-Type) :type headers: dict :return: response (deletion i...
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python
test
dwavesystems/dwave_networkx
dwave_networkx/algorithms/tsp.py
https://github.com/dwavesystems/dwave_networkx/blob/9ea1223ddbc7e86db2f90b8b23e250e6642c3d68/dwave_networkx/algorithms/tsp.py#L30-L107
def traveling_salesman(G, sampler=None, lagrange=2, weight='weight', **sampler_args): """Returns an approximate minimum traveling salesperson route. Defines a QUBO with ground states corresponding to the minimum routes and uses the sampler to sample from it. A route is a cyc...
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Returns an approximate minimum traveling salesperson route. Defines a QUBO with ground states corresponding to the minimum routes and uses the sampler to sample from it. A route is a cycle in the graph that reaches each node exactly once. A minimum route is a route with the smallest total edge wei...
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python
train
opendatateam/udata
udata/core/dataset/rdf.py
https://github.com/opendatateam/udata/blob/f016585af94b0ff6bd73738c700324adc8ba7f8f/udata/core/dataset/rdf.py#L164-L214
def dataset_to_rdf(dataset, graph=None): ''' Map a dataset domain model to a DCAT/RDF graph ''' # Use the unlocalized permalink to the dataset as URI when available # unless there is already an upstream URI if 'uri' in dataset.extras: id = URIRef(dataset.extras['uri']) elif dataset.i...
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Map a dataset domain model to a DCAT/RDF graph
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python
train
keunwoochoi/kapre
kapre/backend_keras.py
https://github.com/keunwoochoi/kapre/blob/8517f45d3ccb9fff1ec0049b9c3e4389f81c20aa/kapre/backend_keras.py#L7-L25
def amplitude_to_decibel(x, amin=1e-10, dynamic_range=80.0): """[K] Convert (linear) amplitude to decibel (log10(x)). x: Keras *batch* tensor or variable. It has to be batch because of sample-wise `K.max()`. amin: minimum amplitude. amplitude smaller than `amin` is set to this. dynamic_range: dynamic...
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[K] Convert (linear) amplitude to decibel (log10(x)). x: Keras *batch* tensor or variable. It has to be batch because of sample-wise `K.max()`. amin: minimum amplitude. amplitude smaller than `amin` is set to this. dynamic_range: dynamic_range in decibel
[ "[", "K", "]", "Convert", "(", "linear", ")", "amplitude", "to", "decibel", "(", "log10", "(", "x", "))", "." ]
python
train
elsampsa/valkka-live
valkka/live/filterchain.py
https://github.com/elsampsa/valkka-live/blob/218bb2ecf71c516c85b1b6e075454bba13090cd8/valkka/live/filterchain.py#L229-L244
def getDevice(self, **kwargs): """Like get, but returns a Device instance (RTSPCameraDevice, etc.) """ filterchain = self.get(**kwargs) if not filterchain: return None # get filterchain init parameters that are compatible with RTSPCameraDevice input...
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Like get, but returns a Device instance (RTSPCameraDevice, etc.)
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python
train
watson-developer-cloud/python-sdk
ibm_watson/discovery_v1.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/discovery_v1.py#L12146-L12151
def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'xpaths') and self.xpaths is not None: _dict['xpaths'] = self.xpaths return _dict
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Return a json dictionary representing this model.
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python
train
monarch-initiative/dipper
dipper/sources/OMIA.py
https://github.com/monarch-initiative/dipper/blob/24cc80db355bbe15776edc5c7b41e0886959ba41/dipper/sources/OMIA.py#L236-L304
def find_omim_type(self): ''' This f(x) needs to be rehomed and shared. Use OMIM's discription of their identifiers to heuristically partition them into genes | phenotypes-diseases type could be - `obsolete` Check `omim_replaced` populated as side effect ...
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This f(x) needs to be rehomed and shared. Use OMIM's discription of their identifiers to heuristically partition them into genes | phenotypes-diseases type could be - `obsolete` Check `omim_replaced` populated as side effect - 'Suspected' (phenotype) Ignoring thus far ...
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python
train
mastro35/flows
flows/Actions/Action.py
https://github.com/mastro35/flows/blob/05e488385673a69597b5b39c7728795aa4d5eb18/flows/Actions/Action.py#L107-L121
def send_message(self, output): """ Send a message to the socket """ file_system_event = None if self.my_action_input: file_system_event = self.my_action_input.file_system_event or None output_action = ActionInput(file_system_event, ...
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Send a message to the socket
[ "Send", "a", "message", "to", "the", "socket" ]
python
train
cloud9ers/gurumate
environment/lib/python2.7/site-packages/IPython/frontend/qt/console/console_widget.py
https://github.com/cloud9ers/gurumate/blob/075dc74d1ee62a8c6b7a8bf2b271364f01629d1e/environment/lib/python2.7/site-packages/IPython/frontend/qt/console/console_widget.py#L514-L520
def cut(self): """ Copy the currently selected text to the clipboard and delete it if it's inside the input buffer. """ self.copy() if self.can_cut(): self._control.textCursor().removeSelectedText()
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Copy the currently selected text to the clipboard and delete it if it's inside the input buffer.
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python
test
materialsvirtuallab/monty
monty/dev.py
https://github.com/materialsvirtuallab/monty/blob/d99d6f3c68372d83489d28ff515566c93cd569e2/monty/dev.py#L97-L195
def get_ncpus(): """ .. note:: If you are using Python >= 2.7, multiprocessing.cpu_count() already provides the number of CPUs. In fact, this is the first method tried. The purpose of this function is to cater to old Python versions that still exist on many Linux style clusters....
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.. note:: If you are using Python >= 2.7, multiprocessing.cpu_count() already provides the number of CPUs. In fact, this is the first method tried. The purpose of this function is to cater to old Python versions that still exist on many Linux style clusters. Number of virtual or ph...
[ "..", "note", "::" ]
python
train
kata198/AdvancedHTMLParser
AdvancedHTMLParser/Tags.py
https://github.com/kata198/AdvancedHTMLParser/blob/06aeea5d8e2ea86e155aae0fc237623d3e9b7f9d/AdvancedHTMLParser/Tags.py#L2267-L2283
def filterCollection(self, filterFunc): ''' filterCollection - Filters only the immediate objects contained within this Collection against a function, not including any children @param filterFunc <function> - A function or lambda expression that returns True to have that element match ...
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filterCollection - Filters only the immediate objects contained within this Collection against a function, not including any children @param filterFunc <function> - A function or lambda expression that returns True to have that element match @return TagCollection<AdvancedTag>
[ "filterCollection", "-", "Filters", "only", "the", "immediate", "objects", "contained", "within", "this", "Collection", "against", "a", "function", "not", "including", "any", "children" ]
python
train
slawek87/yql-finance
examples/stock_price.py
https://github.com/slawek87/yql-finance/blob/52b1ac6720db09c4d8a9864b171506e90a8d3964/examples/stock_price.py#L17-L27
def fetch_googl(): """Returns stock prices for Google company.""" yql = YQL('GOOGL', '2014-01-01', '2014-01-10') for item in yql: print item.get('date'), item.get('price') yql.select('GOOGL', '2014-01-01', '2014-01-10') for item in yql: print item.get('date'), item.get('price')
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Returns stock prices for Google company.
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python
train
cmbruns/pyopenvr
src/openvr/glframework/__init__.py
https://github.com/cmbruns/pyopenvr/blob/68395d26bb3df6ab1f0f059c38d441f962938be6/src/openvr/glframework/__init__.py#L26-L41
def shader_substring(body, stack_frame=1): """ Call this method from a function that defines a literal shader string as the "body" argument. Dresses up a shader string in two ways: 1) Insert #line number declaration 2) un-indents The line number information can help debug glsl comp...
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Call this method from a function that defines a literal shader string as the "body" argument. Dresses up a shader string in two ways: 1) Insert #line number declaration 2) un-indents The line number information can help debug glsl compile errors. The unindenting allows you to type the s...
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python
train
awacha/sastool
sastool/fitting/fitfunctions/sasbasic.py
https://github.com/awacha/sastool/blob/deaddfa3002f3f6818697e36139633b7e30427a3/sastool/fitting/fitfunctions/sasbasic.py#L157-L182
def GuinierPorodGuinier(q, G, Rg1, alpha, Rg2): """Empirical Guinier-Porod-Guinier scattering Inputs: ------- ``q``: independent variable ``G``: factor for the first Guinier-branch ``Rg1``: the first radius of gyration ``alpha``: the power-law exponent ``Rg2``: the s...
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Empirical Guinier-Porod-Guinier scattering Inputs: ------- ``q``: independent variable ``G``: factor for the first Guinier-branch ``Rg1``: the first radius of gyration ``alpha``: the power-law exponent ``Rg2``: the second radius of gyration Formula: -------- ...
[ "Empirical", "Guinier", "-", "Porod", "-", "Guinier", "scattering" ]
python
train
eugene-eeo/graphlite
graphlite/query.py
https://github.com/eugene-eeo/graphlite/blob/8d17e9549ee8610570dcde1b427431a2584395b7/graphlite/query.py#L43-L50
def gen_query(self): """ Generate an SQL query for the edge object. """ return ( SQL.forwards_relation(self.src, self.rel) if self.dst is None else SQL.inverse_relation(self.dst, self.rel) )
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Generate an SQL query for the edge object.
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python
train
nerdvegas/rez
src/rez/vendor/memcache/memcache.py
https://github.com/nerdvegas/rez/blob/1d3b846d53b5b5404edfe8ddb9083f9ceec8c5e7/src/rez/vendor/memcache/memcache.py#L550-L559
def replace(self, key, val, time=0, min_compress_len=0): '''Replace existing key with value. Like L{set}, but only stores in memcache if the key already exists. The opposite of L{add}. @return: Nonzero on success. @rtype: int ''' return self._set("replace", key,...
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Replace existing key with value. Like L{set}, but only stores in memcache if the key already exists. The opposite of L{add}. @return: Nonzero on success. @rtype: int
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python
train
materialsproject/pymatgen
pymatgen/analysis/pourbaix_diagram.py
https://github.com/materialsproject/pymatgen/blob/4ca558cf72f8d5f8a1f21dfdfc0181a971c186da/pymatgen/analysis/pourbaix_diagram.py#L338-L342
def from_dict(cls, d): """ Returns an IonEntry object from a dict. """ return IonEntry(Ion.from_dict(d["ion"]), d["energy"], d.get("name", None))
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Returns an IonEntry object from a dict.
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python
train
s0md3v/Photon
core/utils.py
https://github.com/s0md3v/Photon/blob/6a29f2c9782ea9b3dc090db1774a259033600e39/core/utils.py#L15-L23
def regxy(pattern, response, supress_regex, custom): """Extract a string based on regex pattern supplied by user.""" try: matches = re.findall(r'%s' % pattern, response) for match in matches: verb('Custom regex', match) custom.add(match) except: supress_regex ...
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Extract a string based on regex pattern supplied by user.
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python
train
mattupstate/flask-security
flask_security/views.py
https://github.com/mattupstate/flask-security/blob/a401fb47018fbbbe0b899ea55afadfd0e3cd847a/flask_security/views.py#L187-L210
def send_confirmation(): """View function which sends confirmation instructions.""" form_class = _security.send_confirmation_form if request.is_json: form = form_class(MultiDict(request.get_json())) else: form = form_class() if form.validate_on_submit(): send_confirmation_...
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View function which sends confirmation instructions.
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python
train
oscarbranson/latools
latools/latools.py
https://github.com/oscarbranson/latools/blob/cd25a650cfee318152f234d992708511f7047fbe/latools/latools.py#L2308-L2347
def correlation_plots(self, x_analyte, y_analyte, window=15, filt=True, recalc=False, samples=None, subset=None, outdir=None): """ Plot the local correlation between two analytes. Parameters ---------- x_analyte, y_analyte : str The names of the x and y analytes to c...
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Plot the local correlation between two analytes. Parameters ---------- x_analyte, y_analyte : str The names of the x and y analytes to correlate. window : int, None The rolling window used when calculating the correlation. filt : bool Whether ...
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python
test
openpermissions/perch
perch/model.py
https://github.com/openpermissions/perch/blob/36d78994133918f3c52c187f19e50132960a0156/perch/model.py#L469-L479
def get_parent(self): """ Get the parent resource from the database The get, create & update methods will populate the parent for you. Use this method in the cases where parent has not been populated. """ if not self._parent: self._parent = yield self.parent_...
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Get the parent resource from the database The get, create & update methods will populate the parent for you. Use this method in the cases where parent has not been populated.
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python
train
wummel/linkchecker
third_party/dnspython/dns/tokenizer.py
https://github.com/wummel/linkchecker/blob/c2ce810c3fb00b895a841a7be6b2e78c64e7b042/third_party/dnspython/dns/tokenizer.py#L522-L531
def get_name(self, origin=None): """Read the next token and interpret it as a DNS name. @raises dns.exception.SyntaxError: @rtype: dns.name.Name object""" token = self.get() if not token.is_identifier(): raise dns.exception.SyntaxError('expecting an identifier') ...
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Read the next token and interpret it as a DNS name. @raises dns.exception.SyntaxError: @rtype: dns.name.Name object
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python
train