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bcbio/bcbio-nextgen
bcbio/rnaseq/ericscript.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/rnaseq/ericscript.py#L125-L129
def _get_ericscript_path(self): """Retrieve PATH to the isolated eriscript anaconda environment. """ es = utils.which(os.path.join(utils.get_bcbio_bin(), self.EXECUTABLE)) return os.path.dirname(os.path.realpath(es))
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Retrieve PATH to the isolated eriscript anaconda environment.
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python
train
skorokithakis/shortuuid
shortuuid/main.py
https://github.com/skorokithakis/shortuuid/blob/4da632a986c3a43f75c7df64f27a90bbf7ff8039/shortuuid/main.py#L123-L128
def encoded_length(self, num_bytes=16): """ Returns the string length of the shortened UUID. """ factor = math.log(256) / math.log(self._alpha_len) return int(math.ceil(factor * num_bytes))
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Returns the string length of the shortened UUID.
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python
train
gagneurlab/concise
concise/preprocessing/sequence.py
https://github.com/gagneurlab/concise/blob/d15262eb1e590008bc96ba31e93bfbdbfa1a9fd4/concise/preprocessing/sequence.py#L32-L38
def one_hot2string(arr, vocab): """Convert a one-hot encoded array back to string """ tokens = one_hot2token(arr) indexToLetter = _get_index_dict(vocab) return [''.join([indexToLetter[x] for x in row]) for row in tokens]
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Convert a one-hot encoded array back to string
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python
train
proycon/pynlpl
pynlpl/formats/folia.py
https://github.com/proycon/pynlpl/blob/7707f69a91caaa6cde037f0d0379f1d42500a68b/pynlpl/formats/folia.py#L6527-L6535
def alias(self, annotationtype, set, fallback=False): """Return the alias for a set (if applicable, returns the unaltered set otherwise iff fallback is enabled)""" if inspect.isclass(annotationtype): annotationtype = annotationtype.ANNOTATIONTYPE if annotationtype in self.set_alias and set in se...
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Return the alias for a set (if applicable, returns the unaltered set otherwise iff fallback is enabled)
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python
train
googleapis/google-cloud-python
storage/google/cloud/storage/bucket.py
https://github.com/googleapis/google-cloud-python/blob/85e80125a59cb10f8cb105f25ecc099e4b940b50/storage/google/cloud/storage/bucket.py#L1670-L1699
def get_iam_policy(self, client=None): """Retrieve the IAM policy for the bucket. See https://cloud.google.com/storage/docs/json_api/v1/buckets/getIamPolicy If :attr:`user_project` is set, bills the API request to that project. :type client: :class:`~google.cloud.storage.clien...
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Retrieve the IAM policy for the bucket. See https://cloud.google.com/storage/docs/json_api/v1/buckets/getIamPolicy If :attr:`user_project` is set, bills the API request to that project. :type client: :class:`~google.cloud.storage.client.Client` or ``NoneType`` ...
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python
train
watson-developer-cloud/python-sdk
ibm_watson/speech_to_text_v1.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/speech_to_text_v1.py#L3039-L3046
def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'customizations') and self.customizations is not None: _dict['customizations'] = [ x._to_dict() for x in self.customizations ] return _dict
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Return a json dictionary representing this model.
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python
train
esheldon/fitsio
fitsio/hdu/table.py
https://github.com/esheldon/fitsio/blob/a6f07919f457a282fe240adad9d2c30906b71a15/fitsio/hdu/table.py#L515-L560
def resize(self, nrows, front=False): """ Resize the table to the given size, removing or adding rows as necessary. Note if expanding the table at the end, it is more efficient to use the append function than resizing and then writing. New added rows are zerod, except f...
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python
train
tonybaloney/wily
wily/commands/report.py
https://github.com/tonybaloney/wily/blob/bae259354a91b57d56603f0ca7403186f086a84c/wily/commands/report.py#L19-L188
def report( config, path, metrics, n, output, include_message=False, format=ReportFormat.CONSOLE, console_format=None, ): """ Show information about the cache and runtime. :param config: The configuration :type config: :class:`wily.config.WilyConfig` :param path: The path to the file :typ...
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Show information about the cache and runtime. :param config: The configuration :type config: :class:`wily.config.WilyConfig` :param path: The path to the file :type path: ``str`` :param metrics: Name of the metric to report on :type metrics: ``str`` :param n: Number of items to list ...
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python
train
boriel/zxbasic
arch/zx48k/optimizer.py
https://github.com/boriel/zxbasic/blob/23b28db10e41117805bdb3c0f78543590853b132/arch/zx48k/optimizer.py#L1635-L1652
def goes_requires(self, regs): """ Returns whether any of the goes_to block requires any of the given registers. """ if len(self) and self.mem[-1].inst == 'call' and self.mem[-1].condition_flag is None: for block in self.calls: if block.is_used(regs, 0): ...
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Returns whether any of the goes_to block requires any of the given registers.
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python
train
juju/charm-helpers
charmhelpers/contrib/storage/linux/ceph.py
https://github.com/juju/charm-helpers/blob/aa785c40c3b7a8c69dbfbc7921d6b9f30142e171/charmhelpers/contrib/storage/linux/ceph.py#L958-L967
def image_mapped(name): """Determine whether a RADOS block device is mapped locally.""" try: out = check_output(['rbd', 'showmapped']) if six.PY3: out = out.decode('UTF-8') except CalledProcessError: return False return name in out
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Determine whether a RADOS block device is mapped locally.
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python
train
SchroterQuentin/django-search-listview
search_listview/list.py
https://github.com/SchroterQuentin/django-search-listview/blob/8b027a6908dc30c6ebc613bb4fde6b1ba40124a3/search_listview/list.py#L192-L201
def associate_model(model, field): """ Return the model associate to the ForeignKey or ManyToMany relation """ class_field = model._meta.get_field(field) if hasattr(class_field, "field"): return class_field.field.related.related_model else: return class_field.related_model
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Return the model associate to the ForeignKey or ManyToMany relation
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python
train
yyuu/botornado
boto/ec2/connection.py
https://github.com/yyuu/botornado/blob/fffb056f5ff2324d1d5c1304014cfb1d899f602e/boto/ec2/connection.py#L1371-L1406
def detach_volume(self, volume_id, instance_id=None, device=None, force=False): """ Detach an EBS volume from an EC2 instance. :type volume_id: str :param volume_id: The ID of the EBS volume to be attached. :type instance_id: str :param instance_id...
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Detach an EBS volume from an EC2 instance. :type volume_id: str :param volume_id: The ID of the EBS volume to be attached. :type instance_id: str :param instance_id: The ID of the EC2 instance from which it will be detached. :type device: str ...
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python
train
arista-eosplus/pyeapi
pyeapi/api/switchports.py
https://github.com/arista-eosplus/pyeapi/blob/96a74faef1fe3bd79c4e900aed29c9956a0587d6/pyeapi/api/switchports.py#L344-L377
def set_trunk_groups(self, intf, value=None, default=False, disable=False): """Configures the switchport trunk group value Args: intf (str): The interface identifier to configure. value (str): The set of values to configure the trunk group default (bool): Configures ...
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Configures the switchport trunk group value Args: intf (str): The interface identifier to configure. value (str): The set of values to configure the trunk group default (bool): Configures the trunk group default value disable (bool): Negates all trunk group setti...
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python
train
scarface-4711/denonavr
denonavr/denonavr.py
https://github.com/scarface-4711/denonavr/blob/59a136e27b43cb1d1e140cf67705087b3aa377cd/denonavr/denonavr.py#L1439-L1471
def set_sound_mode(self, sound_mode): """ Set sound_mode of device. Valid values depend on the device and should be taken from "sound_mode_list". Return "True" on success and "False" on fail. """ if sound_mode == ALL_ZONE_STEREO: if self._set_all_zone...
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Set sound_mode of device. Valid values depend on the device and should be taken from "sound_mode_list". Return "True" on success and "False" on fail.
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python
train
dmbee/seglearn
seglearn/transform.py
https://github.com/dmbee/seglearn/blob/d8d7039e92c4c6571a70350c03298aceab8dbeec/seglearn/transform.py#L1301-L1319
def _retrieve_indices(cols): ''' Retrieve a list of indices corresponding to the provided column specification. ''' if isinstance(cols, int): return [cols] elif isinstance(cols, slice): start = cols.start if cols.start else 0 stop = cols.stop ...
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Retrieve a list of indices corresponding to the provided column specification.
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python
train
mitsei/dlkit
dlkit/services/assessment.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/services/assessment.py#L397-L408
def _set_bank_view(self, session): """Sets the underlying bank view to match current view""" if self._bank_view == COMPARATIVE: try: session.use_comparative_bank_view() except AttributeError: pass else: try: sess...
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Sets the underlying bank view to match current view
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python
train
pandas-dev/pandas
pandas/core/resample.py
https://github.com/pandas-dev/pandas/blob/9feb3ad92cc0397a04b665803a49299ee7aa1037/pandas/core/resample.py#L1334-L1373
def _get_resampler(self, obj, kind=None): """ Return my resampler or raise if we have an invalid axis. Parameters ---------- obj : input object kind : string, optional 'period','timestamp','timedelta' are valid Returns ------- a Resam...
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Return my resampler or raise if we have an invalid axis. Parameters ---------- obj : input object kind : string, optional 'period','timestamp','timedelta' are valid Returns ------- a Resampler Raises ------ TypeError if incom...
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python
train
tradenity/python-sdk
tradenity/resources/free_shipping.py
https://github.com/tradenity/python-sdk/blob/d13fbe23f4d6ff22554c6d8d2deaf209371adaf1/tradenity/resources/free_shipping.py#L728-L750
def list_all_free_shippings(cls, **kwargs): """List FreeShippings Return a list of FreeShippings This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.list_all_free_shippings(async=True) >>>...
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List FreeShippings Return a list of FreeShippings This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.list_all_free_shippings(async=True) >>> result = thread.get() :param async bool ...
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python
train
projectshift/shift-boiler
boiler/user/session_interface.py
https://github.com/projectshift/shift-boiler/blob/8e6f3a3e4b9493fb6c8bd16bed160ede153bfb0b/boiler/user/session_interface.py#L45-L59
def save_session(self, *args, **kwargs): """ Save session Skip setting session cookie if requested via g.stateless_sessions """ # do not send session cookie if g.get('stateless_sessions'): return # send cookie return super(BoilerSessionInterf...
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Save session Skip setting session cookie if requested via g.stateless_sessions
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python
train
tensorflow/tensorboard
tensorboard/backend/event_processing/event_accumulator.py
https://github.com/tensorflow/tensorboard/blob/8e5f497b48e40f2a774f85416b8a35ac0693c35e/tensorboard/backend/event_processing/event_accumulator.py#L675-L716
def _Purge(self, event, by_tags): """Purge all events that have occurred after the given event.step. If by_tags is True, purge all events that occurred after the given event.step, but only for the tags that the event has. Non-sequential event.steps suggest that a TensorFlow restart occurred, and we dis...
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Purge all events that have occurred after the given event.step. If by_tags is True, purge all events that occurred after the given event.step, but only for the tags that the event has. Non-sequential event.steps suggest that a TensorFlow restart occurred, and we discard the out-of-order events to displ...
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python
train
fedora-infra/fedora-messaging
fedora_messaging/twisted/protocol.py
https://github.com/fedora-infra/fedora-messaging/blob/be3e88534e2b15d579bcd24f9c4b7e795cb7e0b7/fedora_messaging/twisted/protocol.py#L915-L931
def pauseProducing(self): """ Pause the reception of messages by canceling all existing consumers. This does not disconnect from the server. Message reception can be resumed with :meth:`resumeProducing`. Returns: Deferred: fired when the production is paused. ...
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Pause the reception of messages by canceling all existing consumers. This does not disconnect from the server. Message reception can be resumed with :meth:`resumeProducing`. Returns: Deferred: fired when the production is paused.
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python
train
thiagopbueno/tf-rddlsim
tfrddlsim/simulation/policy_simulator.py
https://github.com/thiagopbueno/tf-rddlsim/blob/d7102a0ad37d179dbb23141640254ea383d3b43f/tfrddlsim/simulation/policy_simulator.py#L226-L272
def trajectory(self, horizon: int, initial_state: Optional[StateTensor] = None) -> TrajectoryOutput: '''Returns the ops for the trajectory generation with given `horizon` and `initial_state`. The simulation returns states, actions and interms as a sequence of ten...
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Returns the ops for the trajectory generation with given `horizon` and `initial_state`. The simulation returns states, actions and interms as a sequence of tensors (i.e., all representations are factored). The reward is a batch sized tensor. The trajectoty output is a tuple: (in...
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python
train
bernii/querystring-parser
querystring_parser/parser.py
https://github.com/bernii/querystring-parser/blob/1d3b652512d55622a37b5f5712909ea41490454b/querystring_parser/parser.py#L55-L68
def get_key(s): ''' Get data between [ and ] remove ' if exist @param s: string to process ''' start = s.find("[") end = s.find("]") if start == -1 or end == -1: return None if s[start + 1] == "'": start += 1 if s[end - 1] == "'": end -= 1 ret...
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Get data between [ and ] remove ' if exist @param s: string to process
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python
train
spacetelescope/synphot_refactor
synphot/observation.py
https://github.com/spacetelescope/synphot_refactor/blob/9c064f3cff0c41dd8acadc0f67c6350931275b9f/synphot/observation.py#L142-L196
def _init_bins(self, binset): """Calculated binned wavelength centers, edges, and flux. By contrast, the native waveset and flux should be considered samples of a continuous function. Thus, it makes sense to interpolate ``self.waveset`` and ``self(self.waveset)``, but not `bins...
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Calculated binned wavelength centers, edges, and flux. By contrast, the native waveset and flux should be considered samples of a continuous function. Thus, it makes sense to interpolate ``self.waveset`` and ``self(self.waveset)``, but not `binset` and `binflux`.
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python
train
JdeRobot/base
src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_rally.py
https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_rally.py#L116-L138
def cmd_rally_alt(self, args): '''handle rally alt change''' if (len(args) < 2): print("Usage: rally alt RALLYNUM newAlt <newBreakAlt>") return if not self.have_list: print("Please list rally points first") return idx = int(args[0]) ...
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handle rally alt change
[ "handle", "rally", "alt", "change" ]
python
train
dotzero/tilda-api-python
tilda/base.py
https://github.com/dotzero/tilda-api-python/blob/0ab984e0236cbfb676b0fbddc1ab37202d92e0a8/tilda/base.py#L54-L70
def to_json(self): """ Returns: str: """ data = dict() for key, value in self.__dict__.items(): if value: if hasattr(value, 'to_dict'): data[key] = value.to_dict() elif isinstance(value, datetime): ...
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Returns: str:
[ "Returns", ":", "str", ":" ]
python
train
madjar/pyramid_persona
pyramid_persona/views.py
https://github.com/madjar/pyramid_persona/blob/b8cc34780e399904bfb8ec907bb11589ac52d9fa/pyramid_persona/views.py#L12-L23
def verify_login(request): """Verifies the assertion and the csrf token in the given request. Returns the email of the user if everything is valid, otherwise raises a HTTPBadRequest""" verifier = request.registry['persona.verifier'] try: data = verifier.verify(request.POST['assertion']) ...
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Verifies the assertion and the csrf token in the given request. Returns the email of the user if everything is valid, otherwise raises a HTTPBadRequest
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python
train
belbio/bel
bel/utils.py
https://github.com/belbio/bel/blob/60333e8815625b942b4836903f3b618cf44b3771/bel/utils.py#L245-L259
def elapsed(self): """ Return the current elapsed time since start If the `elapsed` property is called in the context manager scope, the elapsed time bewteen start and property access is returned. However, if it is accessed outside of the context manager scope, it returns the ela...
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Return the current elapsed time since start If the `elapsed` property is called in the context manager scope, the elapsed time bewteen start and property access is returned. However, if it is accessed outside of the context manager scope, it returns the elapsed time bewteen entering and ...
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python
train
botswana-harvard/edc-registration
edc_registration/model_mixins/updates_or_creates_registered_subject_model_mixin.py
https://github.com/botswana-harvard/edc-registration/blob/3daca624a496945fd4536488f6f80790bbecc081/edc_registration/model_mixins/updates_or_creates_registered_subject_model_mixin.py#L82-L100
def registration_options(self): """Gathers values for common attributes between the registration model and this instance. """ registration_options = {} rs = self.registration_model() for k, v in self.__dict__.items(): if k not in DEFAULT_BASE_FIELDS + ['_state...
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Gathers values for common attributes between the registration model and this instance.
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python
train
jeffknupp/sandman
sandman/model/utils.py
https://github.com/jeffknupp/sandman/blob/253ea4d15cbccd9f0016d66fedd7478614cc0b2f/sandman/model/utils.py#L110-L125
def register_internal_data(cls): """Register a new class, *cls*, with various internal data structures. :params `sandman.model.Model` cls: class to register """ with app.app_context(): if getattr(cls, 'endpoint', None) is None: orig_class = cls cls = type('Sandman' + cl...
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Register a new class, *cls*, with various internal data structures. :params `sandman.model.Model` cls: class to register
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python
train
steder/pundler
pundler/core.py
https://github.com/steder/pundler/blob/68d730b08e46d5f7b8781017c9bba87c7378509d/pundler/core.py#L34-L44
def get_requirement_files(args=None): """ Get the "best" requirements file we can find """ if args and args.input_filename: return [args.input_filename] paths = [] for regex in settings.REQUIREMENTS_SOURCE_GLOBS: paths.extend(glob.glob(regex)) return paths
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Get the "best" requirements file we can find
[ "Get", "the", "best", "requirements", "file", "we", "can", "find" ]
python
train
fhs/pyhdf
pyhdf/VS.py
https://github.com/fhs/pyhdf/blob/dbdc1810a74a38df50dcad81fe903e239d2b388d/pyhdf/VS.py#L1062-L1159
def storedata(self, fieldName, values, data_type, vName, vClass): """Create and initialize a single field vdata, returning the vdata reference number. Args:: fieldName Name of the single field in the vadata to create values Sequence of values to store in the field;. ...
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Create and initialize a single field vdata, returning the vdata reference number. Args:: fieldName Name of the single field in the vadata to create values Sequence of values to store in the field;. Each value can itself be a sequence, in which case the ...
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python
train
UpCloudLtd/upcloud-python-api
upcloud_api/cloud_manager/tag_mixin.py
https://github.com/UpCloudLtd/upcloud-python-api/blob/954b0ad7c4b932b2be31a95d88975f6b0eeac8ed/upcloud_api/cloud_manager/tag_mixin.py#L28-L38
def create_tag(self, name, description=None, servers=[]): """ Create a new Tag. Only name is mandatory. Returns the created Tag object. """ servers = [str(server) for server in servers] body = {'tag': Tag(name, description, servers).to_dict()} res = self.request(...
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Create a new Tag. Only name is mandatory. Returns the created Tag object.
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python
train
pachyderm/python-pachyderm
src/python_pachyderm/pfs_client.py
https://github.com/pachyderm/python-pachyderm/blob/1c58cf91d30e03716a4f45213989e890f7b8a78c/src/python_pachyderm/pfs_client.py#L177-L200
def list_commit(self, repo_name, to_commit=None, from_commit=None, number=0): """ Gets a list of CommitInfo objects. Params: * repo_name: If only `repo_name` is given, all commits in the repo are returned. * to_commit: Optional. Only the ancestors of `to`, including `to`...
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Gets a list of CommitInfo objects. Params: * repo_name: If only `repo_name` is given, all commits in the repo are returned. * to_commit: Optional. Only the ancestors of `to`, including `to` itself, are considered. * from_commit: Optional. Only the descendants of `from`, ...
[ "Gets", "a", "list", "of", "CommitInfo", "objects", "." ]
python
train
raiden-network/raiden-contracts
raiden_contracts/utils/private_key.py
https://github.com/raiden-network/raiden-contracts/blob/a7e72a9477f2204b03f3706360ea8d9c0a8e7063/raiden_contracts/utils/private_key.py#L27-L68
def get_private_key(key_path, password_path=None): """Open a JSON-encoded private key and return it If a password file is provided, uses it to decrypt the key. If not, the password is asked interactively. Raw hex-encoded private keys are supported, but deprecated.""" assert key_path, key_path ...
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Open a JSON-encoded private key and return it If a password file is provided, uses it to decrypt the key. If not, the password is asked interactively. Raw hex-encoded private keys are supported, but deprecated.
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python
train
ncolony/ncolony
ncolony/httpcheck.py
https://github.com/ncolony/ncolony/blob/6ac71bda1de6706fb34244ae4972e36db5f062d3/ncolony/httpcheck.py#L197-L213
def makeService(opt): """Make a service :params opt: dictionary-like object with 'freq', 'config' and 'messages' :returns: twisted.application.internet.TimerService that at opt['freq'] checks for stale processes in opt['config'], and sends restart messages through opt['messages'...
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Make a service :params opt: dictionary-like object with 'freq', 'config' and 'messages' :returns: twisted.application.internet.TimerService that at opt['freq'] checks for stale processes in opt['config'], and sends restart messages through opt['messages']
[ "Make", "a", "service" ]
python
test
cloud-custodian/cloud-custodian
tools/c7n_gcp/c7n_gcp/mu.py
https://github.com/cloud-custodian/cloud-custodian/blob/52ef732eb3d7bc939d1579faf519314814695c08/tools/c7n_gcp/c7n_gcp/mu.py#L658-L680
def ensure_sink(self): """Ensure the log sink and its pub sub topic exist.""" topic_info = self.pubsub.ensure_topic() scope, sink_path, sink_info = self.get_sink(topic_info) client = self.session.client('logging', 'v2', '%s.sinks' % scope) try: sink = client.execute_c...
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Ensure the log sink and its pub sub topic exist.
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python
train
NicolasLM/spinach
spinach/contrib/spinachd/mail.py
https://github.com/NicolasLM/spinach/blob/0122f916643101eab5cdc1f3da662b9446e372aa/spinach/contrib/spinachd/mail.py#L38-L43
def deserialize_email_messages(messages: List[str]): """Deserialize EmailMessages passed as task argument.""" return [ pickle.loads(zlib.decompress(base64.b64decode(m))) for m in messages ]
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Deserialize EmailMessages passed as task argument.
[ "Deserialize", "EmailMessages", "passed", "as", "task", "argument", "." ]
python
train
inasafe/inasafe
extras/xml_tools.py
https://github.com/inasafe/inasafe/blob/831d60abba919f6d481dc94a8d988cc205130724/extras/xml_tools.py#L219-L256
def xml2object(xml, verbose=False): """Generate XML object model from XML file or XML text This is the inverse operation to the __str__ representation (up to whitespace). Input xml can be either an * xml file * open xml file object Return XML_document instance. """ # FIXME - can ...
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Generate XML object model from XML file or XML text This is the inverse operation to the __str__ representation (up to whitespace). Input xml can be either an * xml file * open xml file object Return XML_document instance.
[ "Generate", "XML", "object", "model", "from", "XML", "file", "or", "XML", "text" ]
python
train
saltstack/salt
salt/modules/bridge.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/bridge.py#L290-L305
def _bsd_stp(br, state, iface): ''' Internal, sets STP state. On BSD-like, it is required to specify the STP physical interface ''' kernel = __grains__['kernel'] if kernel == 'NetBSD': cmd = _tool_path('brconfig') else: cmd = _tool_path('ifconfig') if not br or not iface...
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Internal, sets STP state. On BSD-like, it is required to specify the STP physical interface
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python
train
diefans/objective
src/objective/core.py
https://github.com/diefans/objective/blob/e2de37f1cd4f5ad147ab3a5dee7dffd6806f2f88/src/objective/core.py#L283-L309
def _resolve_value(self, value, environment=None): """Resolve the value. Either apply missing or leave the value as is. :param value: the value either from deserialize or serialize :param environment: an optional environment """ # here we care about Undefined values ...
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Resolve the value. Either apply missing or leave the value as is. :param value: the value either from deserialize or serialize :param environment: an optional environment
[ "Resolve", "the", "value", "." ]
python
train
osrg/ryu
ryu/lib/ovs/bridge.py
https://github.com/osrg/ryu/blob/6f906e72c92e10bd0264c9b91a2f7bb85b97780c/ryu/lib/ovs/bridge.py#L164-L175
def get_controller(self): """ Gets the configured OpenFlow controller address. This method is corresponding to the following ovs-vsctl command:: $ ovs-vsctl get-controller <bridge> """ command = ovs_vsctl.VSCtlCommand('get-controller', [self.br_name]) self.r...
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Gets the configured OpenFlow controller address. This method is corresponding to the following ovs-vsctl command:: $ ovs-vsctl get-controller <bridge>
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python
train
Shapeways/coyote_framework
coyote_framework/webdriver/webdriverwrapper/WebDriverWrapper.py
https://github.com/Shapeways/coyote_framework/blob/cb29899b984a21d56bf65d0b1d907073948fe16c/coyote_framework/webdriver/webdriverwrapper/WebDriverWrapper.py#L827-L851
def wait_until_text_is_not_empty(self, locator, timeout=None): """ Waits for an element's text to not be empty @type locator: webdriverwrapper.support.locator.Locator @param locator: locator used to find element @type timeout: int @param timeout...
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Waits for an element's text to not be empty @type locator: webdriverwrapper.support.locator.Locator @param locator: locator used to find element @type timeout: int @param timeout: the maximum number of seconds the driver will wait before timing out ...
[ "Waits", "for", "an", "element", "s", "text", "to", "not", "be", "empty" ]
python
train
fracpete/python-weka-wrapper3
python/weka/flow/source.py
https://github.com/fracpete/python-weka-wrapper3/blob/d850ab1bdb25fbd5a8d86e99f34a397975425838/python/weka/flow/source.py#L173-L183
def quickinfo(self): """ Returns a short string describing some of the options of the actor. :return: the info, None if not available :rtype: str """ return "dir: " + str(self.config["dir"]) \ + ", files: " + str(self.config["list_files"]) \ ...
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Returns a short string describing some of the options of the actor. :return: the info, None if not available :rtype: str
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python
train
Alveo/pyalveo
pyalveo/pyalveo.py
https://github.com/Alveo/pyalveo/blob/1e9eec22bc031bc9a08066f9966565a546e6242e/pyalveo/pyalveo.py#L1509-L1518
def get_contribution(self, url): """Get the details of a particular contribution given it's url""" result = self.api_request(url) # add the contrib id into the metadata result['id'] = os.path.split(result['url'])[1] return result
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Get the details of a particular contribution given it's url
[ "Get", "the", "details", "of", "a", "particular", "contribution", "given", "it", "s", "url" ]
python
train
sveetch/py-css-styleguide
py_css_styleguide/parser.py
https://github.com/sveetch/py-css-styleguide/blob/5acc693f71b2fa7d944d7fed561ae0a7699ccd0f/py_css_styleguide/parser.py#L29-L52
def digest_prelude(self, rule): """ Walk on rule prelude (aka CSS selector) tokens to return a string of the value name (from css selector). Actually only simple selector and selector with descendant combinator are supported. Using any other selector kind may leads to unexpected...
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Walk on rule prelude (aka CSS selector) tokens to return a string of the value name (from css selector). Actually only simple selector and selector with descendant combinator are supported. Using any other selector kind may leads to unexpected issues. Arguments: rul...
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python
train
cloudendpoints/endpoints-python
endpoints/openapi_generator.py
https://github.com/cloudendpoints/endpoints-python/blob/00dd7c7a52a9ee39d5923191c2604b8eafdb3f24/endpoints/openapi_generator.py#L576-L611
def __request_message_descriptor(self, request_kind, message_type, method_id, path): """Describes the parameters and body of the request. Args: request_kind: The type of request being made. message_type: messages.Message or ResourceContainer class. The message to ...
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Describes the parameters and body of the request. Args: request_kind: The type of request being made. message_type: messages.Message or ResourceContainer class. The message to describe. method_id: string, Unique method identifier (e.g. 'myapi.items.method') path: string, HTTP path...
[ "Describes", "the", "parameters", "and", "body", "of", "the", "request", "." ]
python
train
foobarbecue/afterflight
afterflight/logbrowse/views.py
https://github.com/foobarbecue/afterflight/blob/7085f719593f88999dce93f35caec5f15d2991b6/afterflight/logbrowse/views.py#L40-L58
def upload_progress(request): """ AJAX view adapted from django-progressbarupload Return the upload progress and total length values """ if 'X-Progress-ID' in request.GET: progress_id = request.GET['X-Progress-ID'] elif 'X-Progress-ID' in request.META: progress_id = request.META...
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AJAX view adapted from django-progressbarupload Return the upload progress and total length values
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python
train
Miserlou/Zappa
zappa/core.py
https://github.com/Miserlou/Zappa/blob/3ccf7490a8d8b8fa74a61ee39bf44234f3567739/zappa/core.py#L1320-L1432
def deploy_lambda_alb( self, lambda_arn, lambda_name, alb_vpc_config, timeout ): """ The `zappa deploy` functionality for ALB infrastructure. """ if n...
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The `zappa deploy` functionality for ALB infrastructure.
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python
train
pypa/pipenv
pipenv/vendor/pexpect/spawnbase.py
https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/pexpect/spawnbase.py#L192-L238
def compile_pattern_list(self, patterns): '''This compiles a pattern-string or a list of pattern-strings. Patterns must be a StringType, EOF, TIMEOUT, SRE_Pattern, or a list of those. Patterns may also be None which results in an empty list (you might do this if waiting for an EOF or TIM...
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This compiles a pattern-string or a list of pattern-strings. Patterns must be a StringType, EOF, TIMEOUT, SRE_Pattern, or a list of those. Patterns may also be None which results in an empty list (you might do this if waiting for an EOF or TIMEOUT condition without expecting any pattern)...
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python
train
tjvr/skip
skip/__init__.py
https://github.com/tjvr/skip/blob/ac84f7198079732bf22c3b8cbc0dc1a073b1d539/skip/__init__.py#L134-L141
def push_script(self, scriptable, script, callback=None): """Run the script and add it to the list of threads.""" if script in self.threads: self.threads[script].finish() thread = Thread(self.run_script(scriptable, script), scriptable, callback) ...
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Run the script and add it to the list of threads.
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python
train
suds-community/suds
suds/mx/literal.py
https://github.com/suds-community/suds/blob/6fb0a829337b5037a66c20aae6f89b41acd77e40/suds/mx/literal.py#L207-L226
def skip(self, content): """ Get whether to skip this I{content}. Should be skipped when the content is optional and value is either None or an empty list. @param content: Content to skip. @type content: L{Object} @return: True if content is to be skipped. ...
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Get whether to skip this I{content}. Should be skipped when the content is optional and value is either None or an empty list. @param content: Content to skip. @type content: L{Object} @return: True if content is to be skipped. @rtype: bool
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python
train
seomoz/qless-py
qless/job.py
https://github.com/seomoz/qless-py/blob/3eda4ffcd4c0016c9a7e44f780d6155e1a354dda/qless/job.py#L215-L235
def fail(self, group, message): '''Mark the particular job as failed, with the provided type, and a more specific message. By `type`, we mean some phrase that might be one of several categorical modes of failure. The `message` is something more job-specific, like perhaps a traceback. ...
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Mark the particular job as failed, with the provided type, and a more specific message. By `type`, we mean some phrase that might be one of several categorical modes of failure. The `message` is something more job-specific, like perhaps a traceback. This method should __not__ be used to...
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python
train
rduplain/jeni-python
jeni.py
https://github.com/rduplain/jeni-python/blob/feca12ce5e4f0438ae5d7bec59d61826063594f1/jeni.py#L850-L860
def class_in_progress(stack=None): """True if currently inside a class definition, else False.""" if stack is None: stack = inspect.stack() for frame in stack: statement_list = frame[4] if statement_list is None: continue if statement_list[0].strip().startswith('c...
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True if currently inside a class definition, else False.
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python
train
jay-johnson/network-pipeline
network_pipeline/build_training_request.py
https://github.com/jay-johnson/network-pipeline/blob/4e53ae13fe12085e0cf2e5e1aff947368f4f1ffa/network_pipeline/build_training_request.py#L17-L216
def build_training_request( csv_file=ev( "CSV_FILE", "/tmp/cleaned_attack_scans.csv"), meta_file=ev( "CSV_META_FILE", "/tmp/cleaned_metadata.json"), predict_feature=ev( "PREDICT_FEATURE", "label_value"), ignore_featu...
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build_training_request :param csv_file: csv file built with prepare_dataset.py :param meta_file: metadata file built with prepare_dataset.py :param predict_feature: feature (column) to predict :param ignore_features: features to remove from the csv before the split of test +...
[ "build_training_request" ]
python
train
gwpy/gwpy
gwpy/segments/io/hdf5.py
https://github.com/gwpy/gwpy/blob/7a92b917e7dd2d99b15895293a1fa1d66cdb210a/gwpy/segments/io/hdf5.py#L105-L128
def _get_flag_group(h5f, path): """Determine the group to use in order to read a flag """ # if user chose the path, just use it if path: return h5f[path] # if the user gave us the group directly, use it if _is_flag_group(h5f): return h5f # otherwise try and find a single gr...
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Determine the group to use in order to read a flag
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python
train
cloud9ers/gurumate
environment/lib/python2.7/site-packages/IPython/parallel/controller/hub.py
https://github.com/cloud9ers/gurumate/blob/075dc74d1ee62a8c6b7a8bf2b271364f01629d1e/environment/lib/python2.7/site-packages/IPython/parallel/controller/hub.py#L943-L968
def unregister_engine(self, ident, msg): """Unregister an engine that explicitly requested to leave.""" try: eid = msg['content']['id'] except: self.log.error("registration::bad engine id for unregistration: %r", ident, exc_info=True) return self.log.i...
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Unregister an engine that explicitly requested to leave.
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python
test
useblocks/groundwork
groundwork/patterns/gw_recipes_pattern.py
https://github.com/useblocks/groundwork/blob/d34fce43f54246ca4db0f7b89e450dcdc847c68c/groundwork/patterns/gw_recipes_pattern.py#L82-L89
def get(self, name=None): """ Gets a list of all recipes, which are registered by the current plugin. If a name is provided, only the requested recipe is returned or None. :param: name: Name of the recipe """ return self.__app.recipes.get(name, self._plugin)
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Gets a list of all recipes, which are registered by the current plugin. If a name is provided, only the requested recipe is returned or None. :param: name: Name of the recipe
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python
train
F-Secure/see
plugins/agent.py
https://github.com/F-Secure/see/blob/3e053e52a45229f96a12db9e98caf7fb3880e811/plugins/agent.py#L85-L95
def respond(self, output): """Generates server response.""" response = {'exit_code': output.code, 'command_output': output.log} self.send_response(200) self.send_header('Content-type', 'application/json') self.end_headers() self.wfile.write(bytes(js...
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Generates server response.
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python
train
tcalmant/ipopo
pelix/rsa/remoteserviceadmin.py
https://github.com/tcalmant/ipopo/blob/2f9ae0c44cd9c34ef1a9d50837b3254e75678eb1/pelix/rsa/remoteserviceadmin.py#L970-L982
def get_exception(self): # type: () -> Optional[Tuple[Any, Any, Any]] """ Returns the exception associated to the export :return: An exception tuple, if any """ with self.__lock: return ( self.__updateexception if self.__update...
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Returns the exception associated to the export :return: An exception tuple, if any
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python
train
ouroboroscoding/format-oc-python
FormatOC/__init__.py
https://github.com/ouroboroscoding/format-oc-python/blob/c160b46fe4ff2c92333c776991c712de23991225/FormatOC/__init__.py#L1956-L1983
def clean(self, value): """Clean Uses the valid method to check which type the value is, and then calls the correct version of clean on that node Arguments: value {mixed} -- The value to clean Returns: mixed """ # If the value is None and it's optional, return as is if value is None and self._...
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Clean Uses the valid method to check which type the value is, and then calls the correct version of clean on that node Arguments: value {mixed} -- The value to clean Returns: mixed
[ "Clean" ]
python
train
henzk/django-productline
django_productline/tasks.py
https://github.com/henzk/django-productline/blob/24ff156924c1a8c07b99cbb8a1de0a42b8d81f60/django_productline/tasks.py#L270-L279
def import_context(target_zip): """ Overwrite old context.json, use context.json from target_zip :param target_zip: :return: """ context_path = tasks.get_context_path() with zipfile.ZipFile(target_zip) as unzipped_data: with open(context_path, 'w') as context: context.wri...
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Overwrite old context.json, use context.json from target_zip :param target_zip: :return:
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python
train
ThreatConnect-Inc/tcex
tcex/tcex_bin_run.py
https://github.com/ThreatConnect-Inc/tcex/blob/dd4d7a1ef723af1561687120191886b9a2fd4b47/tcex/tcex_bin_run.py#L290-L338
def clear_tc(self, owner, data, clear_type): """Delete threat intel from ThreatConnect platform. Args: owner (str): The ThreatConnect owner. data (dict): The data for the threat intel to clear. clear_type (str): The type of clear action. """ batch = s...
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Delete threat intel from ThreatConnect platform. Args: owner (str): The ThreatConnect owner. data (dict): The data for the threat intel to clear. clear_type (str): The type of clear action.
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python
train
rkhleics/wagtailmenus
wagtailmenus/templatetags/menu_tags.py
https://github.com/rkhleics/wagtailmenus/blob/a41f240bed0d362e0d4dd4ef04a230f2b1827a93/wagtailmenus/templatetags/menu_tags.py#L147-L200
def sub_menu( context, menuitem_or_page, use_specific=None, allow_repeating_parents=None, apply_active_classes=None, template='', use_absolute_page_urls=None, add_sub_menus_inline=None, **kwargs ): """ Retrieve the children pages for the `menuitem_or_page` provided, turn them into menu items, an...
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Retrieve the children pages for the `menuitem_or_page` provided, turn them into menu items, and render them to a template.
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python
train
arve0/leicaexperiment
leicaexperiment/experiment.py
https://github.com/arve0/leicaexperiment/blob/c0393c4d51984a506f813319efb66e54c4f2a426/leicaexperiment/experiment.py#L719-L758
def attributes(path): """Get attributes from path based on format --[A-Z]. Returns namedtuple with upper case attributes equal to what found in path (string) and lower case as int. If path holds several occurrences of same character, only the last one is kept. >>> attrs = attributes('/folder/fi...
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Get attributes from path based on format --[A-Z]. Returns namedtuple with upper case attributes equal to what found in path (string) and lower case as int. If path holds several occurrences of same character, only the last one is kept. >>> attrs = attributes('/folder/file--X00-X01.tif') >>>...
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python
valid
zhanglab/psamm
psamm/datasource/native.py
https://github.com/zhanglab/psamm/blob/dc427848c4f9d109ca590f0afa024c63b685b3f4/psamm/datasource/native.py#L1487-L1497
def write_reactions(self, stream, reactions, properties=None): """Write iterable of reactions as YAML object to stream. Args: stream: File-like object. compounds: Iterable of reaction entries. properties: Set of reaction properties to output (or None to output ...
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Write iterable of reactions as YAML object to stream. Args: stream: File-like object. compounds: Iterable of reaction entries. properties: Set of reaction properties to output (or None to output all).
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python
train
econ-ark/HARK
HARK/cAndCwithStickyE/StickyEmodel.py
https://github.com/econ-ark/HARK/blob/3d184153a189e618a87c9540df1cd12044039cc5/HARK/cAndCwithStickyE/StickyEmodel.py#L98-L131
def getShocks(self): ''' Gets permanent and transitory shocks (combining idiosyncratic and aggregate shocks), but only consumers who update their macroeconomic beliefs this period incorporate all pre- viously unnoticed aggregate permanent shocks. Agents correctly observe the level of al...
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Gets permanent and transitory shocks (combining idiosyncratic and aggregate shocks), but only consumers who update their macroeconomic beliefs this period incorporate all pre- viously unnoticed aggregate permanent shocks. Agents correctly observe the level of all real variables (market resource...
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python
train
eng-tools/sfsimodels
sfsimodels/loader.py
https://github.com/eng-tools/sfsimodels/blob/65a690ca440d61307f5a9b8478e4704f203a5925/sfsimodels/loader.py#L33-L53
def load_soil_sample_data(sp): """ Sample data for the Soil object :param sp: Soil Object :return: """ # soil sp.g_mod = 60.0e6 # [Pa] sp.phi = 30 # [degrees] sp.relative_density = .40 # [decimal] sp.gwl = 2. # [m], ground water level sp.unit_dry_weight = 17000 # [N/m3] ...
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Sample data for the Soil object :param sp: Soil Object :return:
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python
train
ayust/kitnirc
kitnirc/modular.py
https://github.com/ayust/kitnirc/blob/cf19fe39219da75f053e1a3976bf21331b6fefea/kitnirc/modular.py#L73-L83
def handle_event(self, event, client, args): """Dispatch an event to its handler. Note: the handler does not receive the event which triggered its call. If you want to handle more than one event, it's recommended to put the shared handling in a separate function, and create wrapper hand...
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Dispatch an event to its handler. Note: the handler does not receive the event which triggered its call. If you want to handle more than one event, it's recommended to put the shared handling in a separate function, and create wrapper handlers that call the shared function.
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python
train
gem/oq-engine
openquake/hazardlib/gsim/munson_thurber_1997.py
https://github.com/gem/oq-engine/blob/8294553a0b8aba33fd96437a35065d03547d0040/openquake/hazardlib/gsim/munson_thurber_1997.py#L111-L151
def get_mean_and_stddevs(self, sites, rup, dists, imt, stddev_types): """ See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` for spec of input and result values. """ # assign constant log10e = np.log10(np.e) # Distance...
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See :meth:`superclass method <.base.GroundShakingIntensityModel.get_mean_and_stddevs>` for spec of input and result values.
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python
train
pycontribs/pyrax
pyrax/object_storage.py
https://github.com/pycontribs/pyrax/blob/9ddfd5064b3a292d7337906f3b2d5dce95b50b99/pyrax/object_storage.py#L1446-L1465
def copy_object(self, container, obj, new_container, new_obj_name=None, content_type=None): """ Copies the object to the new container, optionally giving it a new name. If you copy to the same container, you must supply a different name. Returns the etag of the newly-copied ...
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Copies the object to the new container, optionally giving it a new name. If you copy to the same container, you must supply a different name. Returns the etag of the newly-copied object. You can optionally change the content_type of the object by supplying that in the 'content_type' pa...
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python
train
dnanexus/dx-toolkit
src/python/dxpy/bindings/dxfile_functions.py
https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/bindings/dxfile_functions.py#L97-L135
def download_dxfile(dxid, filename, chunksize=dxfile.DEFAULT_BUFFER_SIZE, append=False, show_progress=False, project=None, describe_output=None, **kwargs): ''' :param dxid: DNAnexus file ID or DXFile (file handler) object :type dxid: string or DXFile :param filename: Local filename ...
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:param dxid: DNAnexus file ID or DXFile (file handler) object :type dxid: string or DXFile :param filename: Local filename :type filename: string :param append: If True, appends to the local file (default is to truncate local file if it exists) :type append: boolean :param project: project to us...
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python
train
knipknap/SpiffWorkflow
SpiffWorkflow/serializer/prettyxml.py
https://github.com/knipknap/SpiffWorkflow/blob/f0af7f59a332e0619e4f3c00a7d4a3d230760e00/SpiffWorkflow/serializer/prettyxml.py#L100-L129
def deserialize_logical(self, node): """ Reads the logical tag from the given node, returns a Condition object. node -- the xml node (xml.dom.minidom.Node) """ term1_attrib = node.getAttribute('left-field') term1_value = node.getAttribute('left-value') op = node....
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Reads the logical tag from the given node, returns a Condition object. node -- the xml node (xml.dom.minidom.Node)
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python
valid
SBRG/ssbio
ssbio/protein/sequence/properties/tmhmm.py
https://github.com/SBRG/ssbio/blob/e9449e64ffc1a1f5ad07e5849aa12a650095f8a2/ssbio/protein/sequence/properties/tmhmm.py#L101-L169
def label_TM_tmhmm_residue_numbers_and_leaflets(tmhmm_seq): """Determine the residue numbers of the TM-helix residues that cross the membrane and label them by leaflet. Args: tmhmm_seq: g.protein.representative_sequence.seq_record.letter_annotations['TM-tmhmm'] Returns: leaflet_dict: a dic...
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Determine the residue numbers of the TM-helix residues that cross the membrane and label them by leaflet. Args: tmhmm_seq: g.protein.representative_sequence.seq_record.letter_annotations['TM-tmhmm'] Returns: leaflet_dict: a dictionary with leaflet_variable : [residue list] where the variable i...
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python
train
cqparts/cqparts
src/cqparts/search.py
https://github.com/cqparts/cqparts/blob/018e87e14c2c4d1d40b4bfe6a7e22bcf9baf0a53/src/cqparts/search.py#L151-L220
def common_criteria(**common): """ Wrap a function to always call with the given ``common`` named parameters. :property common: criteria common to your function call :return: decorator function :rtype: :class:`function` .. doctest:: >>> import cqparts >>> from cqparts.search i...
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Wrap a function to always call with the given ``common`` named parameters. :property common: criteria common to your function call :return: decorator function :rtype: :class:`function` .. doctest:: >>> import cqparts >>> from cqparts.search import register, search, find >>> fr...
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python
train
CartoDB/cartoframes
cartoframes/datasets.py
https://github.com/CartoDB/cartoframes/blob/c94238a545f3dec45963dac3892540942b6f0df8/cartoframes/datasets.py#L313-L324
def _encode_decode_decorator(func): """decorator for encoding and decoding geoms""" def wrapper(*args): """error catching""" try: processed_geom = func(*args) return processed_geom except ImportError as err: raise ImportError('The Python package `shape...
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decorator for encoding and decoding geoms
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python
train
cltl/KafNafParserPy
KafNafParserPy/feature_extractor/constituency.py
https://github.com/cltl/KafNafParserPy/blob/9bc32e803c176404b255ba317479b8780ed5f569/KafNafParserPy/feature_extractor/constituency.py#L218-L248
def get_deepest_subsumer(self,list_terms): ''' Returns the labels of the deepest node that subsumes all the terms in the list of terms id's provided ''' #To store with how many terms every nonterminal appears count_per_no_terminal = defaultdict(int) #To ...
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Returns the labels of the deepest node that subsumes all the terms in the list of terms id's provided
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python
train
pyviz/holoviews
holoviews/core/util.py
https://github.com/pyviz/holoviews/blob/ae0dd2f3de448b0ca5e9065aabd6ef8d84c7e655/holoviews/core/util.py#L733-L746
def _process_underscores(self, tokens): "Strip underscores to make sure the number is correct after join" groups = [[str(''.join(el))] if b else list(el) for (b,el) in itertools.groupby(tokens, lambda k: k=='_')] flattened = [el for group in groups for el in group] proc...
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Strip underscores to make sure the number is correct after join
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python
train
nens/turn
turn/tools.py
https://github.com/nens/turn/blob/98e806a0749ada0ddfd04b3c29fb04c15bf5ac18/turn/tools.py#L56-L83
def lock(resources, *args, **kwargs): """ Lock resources from the command line, for example for maintenance. """ # all resources are locked if nothing is specified if not resources: client = redis.Redis(decode_responses=True, **kwargs) resources = find_resources(client) if not resources...
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Lock resources from the command line, for example for maintenance.
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python
train
alvinwan/TexSoup
TexSoup/data.py
https://github.com/alvinwan/TexSoup/blob/63323ed71510fd2351102b8c36660a3b7703cead/TexSoup/data.py#L413-L433
def find(self, name=None, **attrs): r"""First descendant node matching criteria. Returns None if no descendant node found. :return: descendant node matching criteria :rtype: Union[None,TexExpr] >>> from TexSoup import TexSoup >>> soup = TexSoup(r''' ... \sectio...
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r"""First descendant node matching criteria. Returns None if no descendant node found. :return: descendant node matching criteria :rtype: Union[None,TexExpr] >>> from TexSoup import TexSoup >>> soup = TexSoup(r''' ... \section{Ooo} ... \textit{eee} ... ...
[ "r", "First", "descendant", "node", "matching", "criteria", "." ]
python
train
bunq/sdk_python
bunq/sdk/json/adapters.py
https://github.com/bunq/sdk_python/blob/da6c9b83e6d83ee8062617f53c6eb7293c0d863d/bunq/sdk/json/adapters.py#L260-L285
def deserialize(cls, target_class, obj): """ :type target_class: context.InstallationContext|type :type obj: dict :rtype: context.InstallationContext """ installation_context = target_class.__new__(target_class) private_key_client = security.rsa_key_from_string(...
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:type target_class: context.InstallationContext|type :type obj: dict :rtype: context.InstallationContext
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python
train
krischer/mtspec
mtspec/multitaper.py
https://github.com/krischer/mtspec/blob/06561b6370f13fcb2e731470ba0f7314f4b2362d/mtspec/multitaper.py#L623-L749
def mt_deconvolve(data_a, data_b, delta, nfft=None, time_bandwidth=None, number_of_tapers=None, weights="adaptive", demean=True, fmax=0.0): """ Deconvolve two time series using multitapers. This uses the eigencoefficients and the weights from the multitaper spectral ...
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Deconvolve two time series using multitapers. This uses the eigencoefficients and the weights from the multitaper spectral estimations and more or less follows this paper: .. |br| raw:: html <br /> **Receiver Functions from Multiple-Taper Spectral Correlation Estimates** *Jeffrey Park, V...
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python
train
dpkp/kafka-python
kafka/client_async.py
https://github.com/dpkp/kafka-python/blob/f6a8a38937688ea2cc5dc13d3d1039493be5c9b5/kafka/client_async.py#L440-L457
def is_disconnected(self, node_id): """Check whether the node connection has been disconnected or failed. A disconnected node has either been closed or has failed. Connection failures are usually transient and can be resumed in the next ready() call, but there are cases where transient ...
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Check whether the node connection has been disconnected or failed. A disconnected node has either been closed or has failed. Connection failures are usually transient and can be resumed in the next ready() call, but there are cases where transient failures need to be caught and re-acted...
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python
train
hellock/icrawler
icrawler/utils/proxy_pool.py
https://github.com/hellock/icrawler/blob/38c925758fd3d3e568d3ecc993f77bc0acfa4788/icrawler/utils/proxy_pool.py#L177-L189
def add_proxy(self, proxy): """Add a valid proxy into pool You must call `add_proxy` method to add a proxy into pool instead of directly operate the `proxies` variable. """ protocol = proxy.protocol addr = proxy.addr if addr in self.proxies: self.prox...
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Add a valid proxy into pool You must call `add_proxy` method to add a proxy into pool instead of directly operate the `proxies` variable.
[ "Add", "a", "valid", "proxy", "into", "pool" ]
python
train
vmlaker/mpipe
src/Stage.py
https://github.com/vmlaker/mpipe/blob/5a1804cf64271931f0cd3e4fff3e2b38291212dd/src/Stage.py#L42-L55
def get(self, timeout=None): """Retrieve results from all the output tubes.""" valid = False result = None for tube in self._output_tubes: if timeout: valid, result = tube.get(timeout) if valid: result = result[0] ...
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Retrieve results from all the output tubes.
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python
train
mitsei/dlkit
dlkit/json_/grading/objects.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/grading/objects.py#L659-L677
def set_lowest_numeric_score(self, score): """Sets the lowest numeric score. arg: score (decimal): the lowest numeric score raise: InvalidArgument - ``score`` is invalid raise: NoAccess - ``score`` cannot be modified *compliance: mandatory -- This method must be implemented...
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Sets the lowest numeric score. arg: score (decimal): the lowest numeric score raise: InvalidArgument - ``score`` is invalid raise: NoAccess - ``score`` cannot be modified *compliance: mandatory -- This method must be implemented.*
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python
train
ninuxorg/nodeshot
nodeshot/core/metrics/signals.py
https://github.com/ninuxorg/nodeshot/blob/2466f0a55f522b2696026f196436ce7ba3f1e5c6/nodeshot/core/metrics/signals.py#L17-L25
def user_loggedin(sender, **kwargs): """ collect metrics about user logins """ values = { 'value': 1, 'path': kwargs['request'].path, 'user_id': str(kwargs['user'].pk), 'username': kwargs['user'].username, } write('user_logins', values=values)
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collect metrics about user logins
[ "collect", "metrics", "about", "user", "logins" ]
python
train
pypa/pipenv
pipenv/vendor/requirementslib/models/requirements.py
https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/requirementslib/models/requirements.py#L483-L493
def parse_hashes(self): # type: () -> None """ Parse hashes from *self.line* and set them on the current object. :returns: Nothing :rtype: None """ line, hashes = self.split_hashes(self.line) self.hashes = hashes self.line = line
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Parse hashes from *self.line* and set them on the current object. :returns: Nothing :rtype: None
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python
train
StagPython/StagPy
stagpy/time_series.py
https://github.com/StagPython/StagPy/blob/18c4416cc4a1011db2fd736ee8b0ec29aa6e4fd4/stagpy/time_series.py#L55-L93
def get_time_series(sdat, var, tstart, tend): """Extract or compute and rescale a time series. Args: sdat (:class:`~stagpy.stagyydata.StagyyData`): a StagyyData instance. var (str): time series name, a key of :data:`stagpy.phyvars.TIME` or :data:`stagpy.phyvars.TIME_EXTRA`. ...
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Extract or compute and rescale a time series. Args: sdat (:class:`~stagpy.stagyydata.StagyyData`): a StagyyData instance. var (str): time series name, a key of :data:`stagpy.phyvars.TIME` or :data:`stagpy.phyvars.TIME_EXTRA`. tstart (float): starting time of desired series. Set ...
[ "Extract", "or", "compute", "and", "rescale", "a", "time", "series", "." ]
python
train
CivicSpleen/ambry
ambry/identity.py
https://github.com/CivicSpleen/ambry/blob/d7f2be4bf1f7ffd086f3fadd4fcae60c32473e42/ambry/identity.py#L1597-L1603
def add_partition(self, p): """Add a partition identity as a child of a dataset identity.""" if not self.partitions: self.partitions = {} self.partitions[p.vid] = p
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Add a partition identity as a child of a dataset identity.
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python
train
greenbender/pynntp
nntp/nntp.py
https://github.com/greenbender/pynntp/blob/991a76331cdf5d8f9dbf5b18f6e29adc80749a2f/nntp/nntp.py#L254-L301
def __info_gzip_gen(self): """Generator for the lines of a compressed info (textual) response. Compressed responses are an extension to the NNTP protocol supported by some usenet servers to reduce the bandwidth of heavily used range style commands that can return large amounts of textua...
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Generator for the lines of a compressed info (textual) response. Compressed responses are an extension to the NNTP protocol supported by some usenet servers to reduce the bandwidth of heavily used range style commands that can return large amounts of textual data. This function handles...
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python
test
chaoss/grimoirelab-elk
grimoire_elk/enriched/jira.py
https://github.com/chaoss/grimoirelab-elk/blob/64e08b324b36d9f6909bf705145d6451c8d34e65/grimoire_elk/enriched/jira.py#L159-L178
def get_identities(self, item): """Return the identities from an item""" item = item['data'] for field in ["assignee", "reporter", "creator"]: if field not in item["fields"]: continue if item["fields"][field]: user = self.get_sh_identity(...
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Return the identities from an item
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python
train
Robpol86/libnl
libnl/genl/genl.py
https://github.com/Robpol86/libnl/blob/274e9fdaa39822d06ef70b799ed4a95937a4d923/libnl/genl/genl.py#L44-L64
def genl_send_simple(sk, family, cmd, version, flags): """Send a Generic Netlink message consisting only of a header. https://github.com/thom311/libnl/blob/libnl3_2_25/lib/genl/genl.c#L84 This function is a shortcut for sending a Generic Netlink message without any message payload. The message will only ...
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Send a Generic Netlink message consisting only of a header. https://github.com/thom311/libnl/blob/libnl3_2_25/lib/genl/genl.c#L84 This function is a shortcut for sending a Generic Netlink message without any message payload. The message will only consist of the Netlink and Generic Netlink headers. The hea...
[ "Send", "a", "Generic", "Netlink", "message", "consisting", "only", "of", "a", "header", "." ]
python
train
quasipedia/simpleactors
simpleactors.py
https://github.com/quasipedia/simpleactors/blob/4253da2d10b3df080b5e7b3fbee03aa6dd10db07/simpleactors.py#L115-L121
def run(self): '''Run until there are no events to be processed.''' # We left-append rather than emit (right-append) because some message # may have been already queued for execution before the director runs. global_event_queue.appendleft((INITIATE, self, (), {})) while global_ev...
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Run until there are no events to be processed.
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python
train
project-rig/rig
rig/machine_control/machine_controller.py
https://github.com/project-rig/rig/blob/3a3e053d3214899b6d68758685835de0afd5542b/rig/machine_control/machine_controller.py#L1373-L1491
def load_application(self, *args, **kwargs): """Load an application to a set of application cores. This method guarantees that once it returns, all required cores will have been loaded. If this is not possible after a small number of attempts, a :py:exc:`.SpiNNakerLoadingError` will be ...
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Load an application to a set of application cores. This method guarantees that once it returns, all required cores will have been loaded. If this is not possible after a small number of attempts, a :py:exc:`.SpiNNakerLoadingError` will be raised. This method can be called in either of ...
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python
train
dmlc/gluon-nlp
scripts/parsing/common/data.py
https://github.com/dmlc/gluon-nlp/blob/4b83eb6bcc8881e5f1081a3675adaa19fac5c0ba/scripts/parsing/common/data.py#L288-L303
def rel2id(self, xs): """Map relation(s) to id(s) Parameters ---------- xs : str or list relation Returns ------- int or list id(s) of relation """ if isinstance(xs, list): return [self._rel2id[x] for x in xs] ...
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Map relation(s) to id(s) Parameters ---------- xs : str or list relation Returns ------- int or list id(s) of relation
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python
train
saltstack/salt
salt/modules/btrfs.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/btrfs.py#L894-L1031
def subvolume_list(path, parent_id=False, absolute=False, ogeneration=False, generation=False, subvolumes=False, uuid=False, parent_uuid=False, sent_subvolume_uuid=False, snapshots=False, readonly=False, deleted=False, generation_cmp=None, ...
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List the subvolumes present in the filesystem. path Mount point for the subvolume parent_id Print parent ID absolute Print all the subvolumes in the filesystem and distinguish between absolute and relative path with respect to the given <path> ogeneration ...
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python
train
thomasdelaet/python-velbus
velbus/messages/temp_sensor_status.py
https://github.com/thomasdelaet/python-velbus/blob/af2f8af43f1a24bf854eff9f3126fd7b5c41b3dd/velbus/messages/temp_sensor_status.py#L42-L88
def populate(self, priority, address, rtr, data): """ -DB1 last bit = local_control -DB1 bit 2+3 = status_mode -DB1 bit 4 = auto send -DB1 bit 5+6+7 = mode -DB1 bit 8 = cool -DB2 = program ...
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-DB1 last bit = local_control -DB1 bit 2+3 = status_mode -DB1 bit 4 = auto send -DB1 bit 5+6+7 = mode -DB1 bit 8 = cool -DB2 = program (not used) -DB3 last bit = heater -DB3 bi...
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python
train
zhanglab/psamm
psamm/fluxanalysis.py
https://github.com/zhanglab/psamm/blob/dc427848c4f9d109ca590f0afa024c63b685b3f4/psamm/fluxanalysis.py#L226-L251
def max_min_l1(self, reaction, weights={}): """Maximize flux of reaction then minimize the L1 norm. During minimization the given reaction will be fixed at the maximum obtained from the first solution. If reaction is a dictionary object, each entry is interpreted as a weight on the obje...
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Maximize flux of reaction then minimize the L1 norm. During minimization the given reaction will be fixed at the maximum obtained from the first solution. If reaction is a dictionary object, each entry is interpreted as a weight on the objective for that reaction (non-existent reaction ...
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python
train
rikrd/inspire
inspirespeech/common.py
https://github.com/rikrd/inspire/blob/e281c0266a9a9633f34ab70f9c3ad58036c19b59/inspirespeech/common.py#L989-L1061
def recognise_model(feature_filename, symbollist_filename, model_directory, recognition_filename, pronunciation_dictionary_filename, list_words_filename='', cmllr_directory=None, t...
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Perform recognition using a model and assuming a single word language. If the list_words_filename is == '' then all the words in the dictionary are used as language words.
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python
train