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adafruit/Adafruit_Python_BluefruitLE
Adafruit_BluefruitLE/corebluetooth/adapter.py
https://github.com/adafruit/Adafruit_Python_BluefruitLE/blob/34fc6f596371b961628369d78ce836950514062f/Adafruit_BluefruitLE/corebluetooth/adapter.py#L59-L69
def _state_changed(self, state): """Called when the power state changes.""" logger.debug('Adapter state change: {0}'.format(state)) # Handle when powered on. if state == 5: self._powered_off.clear() self._powered_on.set() # Handle when powered off. ...
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Called when the power state changes.
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python
valid
fabioz/PyDev.Debugger
pydevd_attach_to_process/winappdbg/textio.py
https://github.com/fabioz/PyDev.Debugger/blob/ed9c4307662a5593b8a7f1f3389ecd0e79b8c503/pydevd_attach_to_process/winappdbg/textio.py#L238-L265
def string_list_file(cls, filename): """ Read a list of string values from a file. The file format is: - # anywhere in the line begins a comment - leading and trailing spaces are ignored - empty lines are ignored - strings cannot span over a single line ...
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Read a list of string values from a file. The file format is: - # anywhere in the line begins a comment - leading and trailing spaces are ignored - empty lines are ignored - strings cannot span over a single line @type filename: str @param filename: Name o...
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python
train
PyMLGame/pymlgame
pymlgame/controller.py
https://github.com/PyMLGame/pymlgame/blob/450fe77d35f9a26c107586d6954f69c3895bf504/pymlgame/controller.py#L72-L85
def _del_controller(self, uid): """ Remove controller from internal list and tell the game. :param uid: Unique id of the controller :type uid: str """ try: self.controllers.pop(uid) e = Event(uid, E_DISCONNECT) self.queue.put_nowait(e)...
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Remove controller from internal list and tell the game. :param uid: Unique id of the controller :type uid: str
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python
train
SmokinCaterpillar/pypet
pypet/utils/storagefactory.py
https://github.com/SmokinCaterpillar/pypet/blob/97ad3e80d46dbdea02deeb98ea41f05a19565826/pypet/utils/storagefactory.py#L18-L25
def _create_storage(storage_service, trajectory=None, **kwargs): """Creates a service from a constructor and checks which kwargs are not used""" kwargs_copy = kwargs.copy() kwargs_copy['trajectory'] = trajectory matching_kwargs = get_matching_kwargs(storage_service, kwargs_copy) storage_service = st...
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Creates a service from a constructor and checks which kwargs are not used
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python
test
materialsproject/pymatgen
pymatgen/core/sites.py
https://github.com/materialsproject/pymatgen/blob/4ca558cf72f8d5f8a1f21dfdfc0181a971c186da/pymatgen/core/sites.py#L488-L507
def is_periodic_image(self, other, tolerance=1e-8, check_lattice=True): """ Returns True if sites are periodic images of each other. Args: other (PeriodicSite): Other site tolerance (float): Tolerance to compare fractional coordinates check_lattice (bool): Wh...
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Returns True if sites are periodic images of each other. Args: other (PeriodicSite): Other site tolerance (float): Tolerance to compare fractional coordinates check_lattice (bool): Whether to check if the two sites have the same lattice. Returns: ...
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python
train
openid/python-openid
openid/consumer/consumer.py
https://github.com/openid/python-openid/blob/f7e13536f0d1828d3cef5ae7a7b55cabadff37fc/openid/consumer/consumer.py#L1326-L1362
def _getOpenID1SessionType(self, assoc_response): """Given an association response message, extract the OpenID 1.X session type. This function mostly takes care of the 'no-encryption' default behavior in OpenID 1. If the association type is plain-text, this function will ...
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Given an association response message, extract the OpenID 1.X session type. This function mostly takes care of the 'no-encryption' default behavior in OpenID 1. If the association type is plain-text, this function will return 'no-encryption' @returns: The association t...
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python
train
decryptus/httpdis
httpdis/httpdis.py
https://github.com/decryptus/httpdis/blob/5d198cdc5558f416634602689b3df2c8aeb34984/httpdis/httpdis.py#L1018-L1112
def register(handler, op, safe_init = None, at_start = None, name = None, at_stop = None, static = False, root = None, replacement = None, charset ...
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Register a command @handler: function to execute when the command is received @op: http method(s) @safe_init: called by the safe_init() function of this module @at_start: called once just before the server starts @at_stop: called once just before the server stops @name: name of the command (if n...
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python
train
googlefonts/fontbakery
Lib/fontbakery/reporters/html.py
https://github.com/googlefonts/fontbakery/blob/b355aea2e619a4477769e060d24c32448aa65399/Lib/fontbakery/reporters/html.py#L104-L108
def html_for_check(self, check) -> str: """Return HTML string for complete single check.""" check["logs"].sort(key=lambda c: LOGLEVELS.index(c["status"])) logs = "<ul>" + "".join([self.log_html(log) for log in check["logs"]]) + "</ul>" return logs
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Return HTML string for complete single check.
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python
train
mitsei/dlkit
dlkit/json_/grading/sessions.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/grading/sessions.py#L4756-L4779
def alias_gradebook(self, gradebook_id, alias_id): """Adds an ``Id`` to a ``Gradebook`` for the purpose of creating compatibility. The primary ``Id`` of the ``Gradebook`` is determined by the provider. The new ``Id`` performs as an alias to the primary ``Id`` . If the alias is a pointer...
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Adds an ``Id`` to a ``Gradebook`` for the purpose of creating compatibility. The primary ``Id`` of the ``Gradebook`` is determined by the provider. The new ``Id`` performs as an alias to the primary ``Id`` . If the alias is a pointer to another gradebook, it is reassigned to the given g...
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python
train
amol-/depot
examples/turbogears/depotexample/model/auth.py
https://github.com/amol-/depot/blob/82104d2ae54f8ef55f05fb5a3f148cdc9f928959/examples/turbogears/depotexample/model/auth.py#L101-L103
def by_user_name(cls, username): """Return the user object whose user name is ``username``.""" return DBSession.query(cls).filter_by(user_name=username).first()
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Return the user object whose user name is ``username``.
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python
train
NuGrid/NuGridPy
nugridpy/mesa.py
https://github.com/NuGrid/NuGridPy/blob/eee8047446e398be77362d82c1d8b3310054fab0/nugridpy/mesa.py#L3827-L3944
def abu_profiles(p,ifig=1,xlm=xlm,ylm=(-8,0),show=False,abunds='All',xaxis=xaxis_type, figsize1=(8,8)): '''Four panels of abundance plots Parameters ---------- p : instance mesa_profile instance xlm : tuple xlimits: mass_min, mass_max abus : 'All' plots many 'commonly used'...
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Four panels of abundance plots Parameters ---------- p : instance mesa_profile instance xlm : tuple xlimits: mass_min, mass_max abus : 'All' plots many 'commonly used' isotopes up to Fe if they are in your mesa output. otherwise provide a list of lists of desired abus ...
[ "Four", "panels", "of", "abundance", "plots" ]
python
train
CalebBell/ht
ht/boiling_nucleic.py
https://github.com/CalebBell/ht/blob/3097ef9524c4cf0068ad453c17b10ec9ce551eee/ht/boiling_nucleic.py#L1059-L1114
def Serth_HEDH(D, sigma, Hvap, rhol, rhog): r'''Calculates critical heat flux for nucleic boiling of a tube bundle according to [2]_, citing [3]_, and using [1]_ as the original form. .. math:: q_c = KH_{vap} \rho_g^{0.5}\left[\sigma g (\rho_L-\rho_g)\right]^{0.25} K = 0.123 (R^*)^{-0.25} ...
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r'''Calculates critical heat flux for nucleic boiling of a tube bundle according to [2]_, citing [3]_, and using [1]_ as the original form. .. math:: q_c = KH_{vap} \rho_g^{0.5}\left[\sigma g (\rho_L-\rho_g)\right]^{0.25} K = 0.123 (R^*)^{-0.25} \text{ for 0.12 < R* < 1.17} K = 0.118 ...
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python
train
dereneaton/ipyrad
ipyrad/analysis/sratools.py
https://github.com/dereneaton/ipyrad/blob/5eeb8a178160f45faf71bf47cec4abe998a575d1/ipyrad/analysis/sratools.py#L441-L462
def fields_checker(fields): """ returns a fields argument formatted as a list of strings. and doesn't allow zero. """ ## make sure fields will work if isinstance(fields, int): fields = str(fields) if isinstance(fields, str): if "," in fields: fields = [str(i) for ...
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returns a fields argument formatted as a list of strings. and doesn't allow zero.
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python
valid
truemped/tornadotools
tornadotools/mongrel2/handler.py
https://github.com/truemped/tornadotools/blob/d22632b83810afc353fa886fbc9e265bee78653f/tornadotools/mongrel2/handler.py#L59-L68
def _create_listening_stream(self, pull_addr): """ Create a stream listening for Requests. The `self._recv_callback` method is asociated with incoming requests. """ sock = self._zmq_context.socket(zmq.PULL) sock.connect(pull_addr) stream = ZMQStream(sock, io_loop=...
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Create a stream listening for Requests. The `self._recv_callback` method is asociated with incoming requests.
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python
train
hyperboria/python-cjdns
setup.py
https://github.com/hyperboria/python-cjdns/blob/a9ae5d6d2e99c18f9fc50a9589729cd176efa900/setup.py#L20-L29
def readme(fname): """Reads a markdown file and returns the contents formatted as rst""" md = open(os.path.join(os.path.dirname(__file__), fname)).read() output = md try: import pypandoc output = pypandoc.convert(md, 'rst', format='md') except ImportError: pass return out...
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Reads a markdown file and returns the contents formatted as rst
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python
train
f3at/feat
src/feat/agencies/agency.py
https://github.com/f3at/feat/blob/15da93fc9d6ec8154f52a9172824e25821195ef8/src/feat/agencies/agency.py#L1339-L1343
def snapshot_agents(self, force=False): '''snapshot agents if number of entries from last snapshot if greater than 1000. Use force=True to override.''' for agent in self._agents: agent.check_if_should_snapshot(force)
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snapshot agents if number of entries from last snapshot if greater than 1000. Use force=True to override.
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python
train
foliant-docs/foliantcontrib.includes
foliant/preprocessors/includes.py
https://github.com/foliant-docs/foliantcontrib.includes/blob/4bd89f6d287c9e21246d984c90ad05c2ccd24fcc/foliant/preprocessors/includes.py#L53-L108
def _sync_repo(self, repo_url: str, revision: str or None = None) -> Path: '''Clone a Git repository to the cache dir. If it has been cloned before, update it. :param repo_url: Repository URL :param revision: Revision: branch, commit hash, or tag :returns: Path to the cloned repository...
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Clone a Git repository to the cache dir. If it has been cloned before, update it. :param repo_url: Repository URL :param revision: Revision: branch, commit hash, or tag :returns: Path to the cloned repository
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python
train
zeehio/parmap
parmap/parmap.py
https://github.com/zeehio/parmap/blob/368b77e1a49ff30aef9de2274ad430ad43a3f617/parmap/parmap.py#L220-L273
def _map_or_starmap(function, iterable, args, kwargs, map_or_starmap): """ Shared function between parmap.map and parmap.starmap. Refer to those functions for details. """ arg_newarg = (("parallel", "pm_parallel"), ("chunksize", "pm_chunksize"), ("pool", "pm_pool"), ("processes", "...
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Shared function between parmap.map and parmap.starmap. Refer to those functions for details.
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python
train
Nic30/hwt
hwt/hdl/types/arrayCast.py
https://github.com/Nic30/hwt/blob/8cbb399e326da3b22c233b98188a9d08dec057e6/hwt/hdl/types/arrayCast.py#L11-L49
def getBits_from_array(array, wordWidth, start, end, reinterpretElmToType=None): """ Gets value of bits between selected range from memory :param start: bit address of start of bit of bits :param end: bit address of first bit behind bits :return: instance of BitsVal (derived ...
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Gets value of bits between selected range from memory :param start: bit address of start of bit of bits :param end: bit address of first bit behind bits :return: instance of BitsVal (derived from SimBits type) which contains copy of selected bits
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python
test
croscon/fleaker
fleaker/component.py
https://github.com/croscon/fleaker/blob/046b026b79c9912bceebb17114bc0c5d2d02e3c7/fleaker/component.py#L222-L241
def clear_context(self, app=None): """Clear the component's context. Keyword Args: app (flask.Flask, optional): The app to clear this component's context for. If omitted, the value from ``Component.app`` is used. """ if (app is None and self._...
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Clear the component's context. Keyword Args: app (flask.Flask, optional): The app to clear this component's context for. If omitted, the value from ``Component.app`` is used.
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python
train
KelSolaar/Foundations
foundations/namespace.py
https://github.com/KelSolaar/Foundations/blob/5c141330faf09dad70a12bc321f4c564917d0a91/foundations/namespace.py#L67-L95
def get_namespace(attribute, namespace_splitter=NAMESPACE_SPLITTER, root_only=False): """ Returns given attribute foundations.namespace. Usage:: >>> get_namespace("grandParent|parent|child") u'grandParent|parent' >>> get_namespace("grandParent|parent|child", root_only=True) ...
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Returns given attribute foundations.namespace. Usage:: >>> get_namespace("grandParent|parent|child") u'grandParent|parent' >>> get_namespace("grandParent|parent|child", root_only=True) u'grandParent' :param attribute: Attribute. :type attribute: unicode :param namespac...
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python
train
rigetti/pyquil
pyquil/paulis.py
https://github.com/rigetti/pyquil/blob/ec98e453084b0037d69d8c3245f6822a5422593d/pyquil/paulis.py#L952-L995
def trotterize(first_pauli_term, second_pauli_term, trotter_order=1, trotter_steps=1): """ Create a Quil program that approximates exp( (A + B)t) where A and B are PauliTerm operators. :param PauliTerm first_pauli_term: PauliTerm denoted `A` :param PauliTerm second_pauli_term: PauliT...
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Create a Quil program that approximates exp( (A + B)t) where A and B are PauliTerm operators. :param PauliTerm first_pauli_term: PauliTerm denoted `A` :param PauliTerm second_pauli_term: PauliTerm denoted `B` :param int trotter_order: Optional argument indicating the Suzuki-Trotter ...
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python
train
Microsoft/nni
tools/nni_cmd/nnictl_utils.py
https://github.com/Microsoft/nni/blob/c7cc8db32da8d2ec77a382a55089f4e17247ce41/tools/nni_cmd/nnictl_utils.py#L304-L311
def log_internal(args, filetype): '''internal function to call get_log_content''' file_name = get_config_filename(args) if filetype == 'stdout': file_full_path = os.path.join(NNICTL_HOME_DIR, file_name, 'stdout') else: file_full_path = os.path.join(NNICTL_HOME_DIR, file_name, 'stderr') ...
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internal function to call get_log_content
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python
train
eerimoq/bincopy
bincopy.py
https://github.com/eerimoq/bincopy/blob/5e02cd001c3e9b54729425db6bffad5f03e1beac/bincopy.py#L754-L773
def add_srec(self, records, overwrite=False): """Add given Motorola S-Records string. Set `overwrite` to ``True`` to allow already added data to be overwritten. """ for record in StringIO(records): type_, address, size, data = unpack_srec(record.strip()) if typ...
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Add given Motorola S-Records string. Set `overwrite` to ``True`` to allow already added data to be overwritten.
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python
train
klmitch/turnstile
turnstile/limits.py
https://github.com/klmitch/turnstile/blob/8fe9a359b45e505d3192ab193ecf9be177ab1a17/turnstile/limits.py#L198-L229
def decode(cls, key): """ Decode a bucket key into a BucketKey instance. :param key: The string form of a bucket key. :returns: A suitable instance of BucketKey corresponding to the passed-in key. """ # Determine bucket key version prefix, sep...
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Decode a bucket key into a BucketKey instance. :param key: The string form of a bucket key. :returns: A suitable instance of BucketKey corresponding to the passed-in key.
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python
train
materialsproject/pymatgen
pymatgen/electronic_structure/boltztrap.py
https://github.com/materialsproject/pymatgen/blob/4ca558cf72f8d5f8a1f21dfdfc0181a971c186da/pymatgen/electronic_structure/boltztrap.py#L1125-L1196
def get_thermal_conductivity(self, output='eigs', doping_levels=True, k_el=True, relaxation_time=1e-14): """ Gives the electronic part of the thermal conductivity in either a full 3x3 tensor form, as 3 eigenvalues, or as the average value (trace/3.0) If ...
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Gives the electronic part of the thermal conductivity in either a full 3x3 tensor form, as 3 eigenvalues, or as the average value (trace/3.0) If doping_levels=True, the results are given at different p and n doping levels (given by self.doping), otherwise it is given as a series ...
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python
train
watson-developer-cloud/python-sdk
ibm_watson/speech_to_text_v1_adapter.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/speech_to_text_v1_adapter.py#L28-L241
def recognize_using_websocket(self, audio, content_type, recognize_callback, model=None, language_customization_id=None, ...
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Sends audio for speech recognition using web sockets. :param AudioSource audio: The audio to transcribe in the format specified by the `Content-Type` header. :param str content_type: The type of the input: audio/basic, audio/flac, audio/l16, audio/mp3, audio/mpeg, audio/mulaw, audio/ogg...
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python
train
angr/angr
angr/analyses/cfg/cfg_base.py
https://github.com/angr/angr/blob/4e2f97d56af5419ee73bdb30482c8dd8ff5f3e40/angr/analyses/cfg/cfg_base.py#L2027-L2046
def _resolve_indirect_jump_timelessly(self, addr, block, func_addr, jumpkind): """ Checks if MIPS32 and calls MIPS32 check, otherwise false :param int addr: irsb address :param pyvex.IRSB block: irsb :param int func_addr: Function address :return: If it was resolved and ...
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Checks if MIPS32 and calls MIPS32 check, otherwise false :param int addr: irsb address :param pyvex.IRSB block: irsb :param int func_addr: Function address :return: If it was resolved and targets alongside it :rtype: tuple
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python
train
assamite/creamas
creamas/core/environment.py
https://github.com/assamite/creamas/blob/54dc3e31c97a3f938e58272f8ab80b6bcafeff58/creamas/core/environment.py#L319-L335
def destroy(self, folder=None, as_coro=False): '''Destroy the environment. Does the following: 1. calls :py:meth:`~creamas.core.Environment.save_info` 2. for each agent: calls :py:meth:`close` 3. Shuts down its RPC-service. ''' async def _destroy(folder): ...
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Destroy the environment. Does the following: 1. calls :py:meth:`~creamas.core.Environment.save_info` 2. for each agent: calls :py:meth:`close` 3. Shuts down its RPC-service.
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python
train
RJT1990/pyflux
pyflux/inference/bbvi.py
https://github.com/RJT1990/pyflux/blob/297f2afc2095acd97c12e827dd500e8ea5da0c0f/pyflux/inference/bbvi.py#L54-L62
def change_parameters(self,params): """ Utility function for changing the approximate distribution parameters """ no_of_params = 0 for core_param in range(len(self.q)): for approx_param in range(self.q[core_param].param_no): self.q[core_param].vi_chang...
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Utility function for changing the approximate distribution parameters
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python
train
mediawiki-utilities/python-mwoauth
mwoauth/flask.py
https://github.com/mediawiki-utilities/python-mwoauth/blob/cd6990753ec3d59b7cfd96a76459f71ef4790cd3/mwoauth/flask.py#L200-L210
def mwapi_session(self, *args, **kwargs): """ Create :class:`mwapi.Session` that is authorized for the current user. `args` and `kwargs` are passed directly to :class:`mwapi.Session` """ import mwapi auth1 = self.generate_auth() return mwapi.Session(*args...
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Create :class:`mwapi.Session` that is authorized for the current user. `args` and `kwargs` are passed directly to :class:`mwapi.Session`
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python
train
watson-developer-cloud/python-sdk
ibm_watson/websocket/recognize_listener.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/websocket/recognize_listener.py#L139-L150
def on_open(self, ws): """ Callback executed when a connection is opened to the server. Handles streaming of audio to the server. :param ws: Websocket client """ self.callback.on_connected() # Send initialization message init_data = self.build_start_mess...
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Callback executed when a connection is opened to the server. Handles streaming of audio to the server. :param ws: Websocket client
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python
train
CityOfZion/neo-python
neo/Wallets/Wallet.py
https://github.com/CityOfZion/neo-python/blob/fe90f62e123d720d4281c79af0598d9df9e776fb/neo/Wallets/Wallet.py#L560-L581
def GetTokenBalance(self, token, watch_only=0): """ Get the balance of the specified token. Args: token (NEP5Token): an instance of type neo.Wallets.NEP5Token to get the balance from. watch_only (bool): True, to limit to watch only wallets. Returns: ...
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Get the balance of the specified token. Args: token (NEP5Token): an instance of type neo.Wallets.NEP5Token to get the balance from. watch_only (bool): True, to limit to watch only wallets. Returns: Decimal: total balance for `token`.
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python
train
AguaClara/aguaclara
aguaclara/core/physchem.py
https://github.com/AguaClara/aguaclara/blob/8dd4e734768b166a7fc2b60388a24df2f93783fc/aguaclara/core/physchem.py#L219-L230
def headloss_fric(FlowRate, Diam, Length, Nu, PipeRough): """Return the major head loss (due to wall shear) in a pipe. This equation applies to both laminar and turbulent flows. """ #Checking input validity - inputs not checked here are checked by #functions this function calls. ut.check_range(...
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Return the major head loss (due to wall shear) in a pipe. This equation applies to both laminar and turbulent flows.
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python
train
bitesofcode/projexui
projexui/widgets/xlogrecordwidget/xlogrecordwidget.py
https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/widgets/xlogrecordwidget/xlogrecordwidget.py#L358-L376
def setActiveLevels(self, levels): """ Defines the levels for this widgets visible/processed levels. :param levels | [<int>, ..] """ self._activeLevels = levels tree = self.uiRecordTREE tree.setUpdatesEnabled(False) tree.blockSignals...
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Defines the levels for this widgets visible/processed levels. :param levels | [<int>, ..]
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python
train
materialsproject/pymatgen
pymatgen/io/abinit/tasks.py
https://github.com/materialsproject/pymatgen/blob/4ca558cf72f8d5f8a1f21dfdfc0181a971c186da/pymatgen/io/abinit/tasks.py#L770-L817
def select_qadapter(self, pconfs): """ Given a list of parallel configurations, pconfs, this method select an `optimal` configuration according to some criterion as well as the :class:`QueueAdapter` to use. Args: pconfs: :class:`ParalHints` object with the list of parallel c...
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Given a list of parallel configurations, pconfs, this method select an `optimal` configuration according to some criterion as well as the :class:`QueueAdapter` to use. Args: pconfs: :class:`ParalHints` object with the list of parallel configurations Returns: :class:`Par...
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python
train
brocade/pynos
pynos/versions/ver_6/ver_6_0_1/yang/brocade_ras_ext.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/brocade_ras_ext.py#L52-L64
def show_raslog_output_show_all_raslog_number_of_entries(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") show_raslog = ET.Element("show_raslog") config = show_raslog output = ET.SubElement(show_raslog, "output") show_all_raslog = ET.SubEl...
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Auto Generated Code
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python
train
stephen-bunn/file-config
src/file_config/utils.py
https://github.com/stephen-bunn/file-config/blob/93429360c949985202e1f2b9cd0340731819ba75/src/file_config/utils.py#L320-L333
def is_array_type(type_): """ Checks if the given type is a array type. :param type_: The type to check :return: True if the type is a array type, otherwise False :rtype: bool """ array_types = _get_types(Types.ARRAY) if is_typing_type(type_): return type_ in array_types or ( ...
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python
train
tomnor/channelpack
channelpack/pack.py
https://github.com/tomnor/channelpack/blob/9ad3cd11c698aed4c0fc178385b2ba38a7d0efae/channelpack/pack.py#L613-L624
def set_stopextend(self, n): """Extend the True elements by n when setting the conditions based on a 'stopcond' condition. n is an integer >= 0. .. note:: Updates the mask if not no_auto. """ self.conconf.set_condition('stopextend', n) if not self.no_...
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Extend the True elements by n when setting the conditions based on a 'stopcond' condition. n is an integer >= 0. .. note:: Updates the mask if not no_auto.
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python
train
bcbio/bcbio-nextgen
bcbio/structural/validate.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/structural/validate.py#L77-L96
def _survivor_merge(call_vcf, truth_vcf, stats, work_dir, data): """Perform a merge of two callsets using SURVIVOR, """ out_file = os.path.join(work_dir, "eval-merge.vcf") if not utils.file_uptodate(out_file, call_vcf): in_call_vcf = call_vcf.replace(".vcf.gz", ".vcf") if not utils.file_...
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Perform a merge of two callsets using SURVIVOR,
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python
train
hvac/hvac
hvac/api/secrets_engines/transit.py
https://github.com/hvac/hvac/blob/cce5b86889193f622c2a72a4a1b7e1c9c8aff1ce/hvac/api/secrets_engines/transit.py#L759-L792
def restore_key(self, backup, name=None, force=False, mount_point=DEFAULT_MOUNT_POINT): """Restore the backup as a named key. This will restore the key configurations and all the versions of the named key along with HMAC keys. The input to this endpoint should be the output of /backup endpoint....
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Restore the backup as a named key. This will restore the key configurations and all the versions of the named key along with HMAC keys. The input to this endpoint should be the output of /backup endpoint. For safety, by default the backend will refuse to restore to an existing key. If you want ...
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python
train
getnikola/coil
coil/utils.py
https://github.com/getnikola/coil/blob/80ef1827460b0691cf2c98351a14d88e235c9899/coil/utils.py#L70-L90
def ask_yesno(query, default=None): """Ask a yes/no question.""" if default is None: default_q = ' [y/n]' elif default is True: default_q = ' [Y/n]' elif default is False: default_q = ' [y/N]' if sys.version_info[0] == 3: inp = raw_input("{query}{default_q} ".format( ...
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Ask a yes/no question.
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python
train
sentinel-hub/sentinelhub-py
sentinelhub/geometry.py
https://github.com/sentinel-hub/sentinelhub-py/blob/08a83b7f1e289187159a643336995d8369860fea/sentinelhub/geometry.py#L284-L297
def get_partition(self, num_x=1, num_y=1): """ Partitions bounding box into smaller bounding boxes of the same size. :param num_x: Number of parts BBox will be horizontally divided into. :type num_x: int :param num_y: Number of parts BBox will be vertically divided into. :type n...
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Partitions bounding box into smaller bounding boxes of the same size. :param num_x: Number of parts BBox will be horizontally divided into. :type num_x: int :param num_y: Number of parts BBox will be vertically divided into. :type num_y: int or None :return: Two-dimensional list...
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python
train
twilio/twilio-python
twilio/rest/api/v2010/account/sip/credential_list/__init__.py
https://github.com/twilio/twilio-python/blob/c867895f55dcc29f522e6e8b8868d0d18483132f/twilio/rest/api/v2010/account/sip/credential_list/__init__.py#L288-L301
def credentials(self): """ Access the credentials :returns: twilio.rest.api.v2010.account.sip.credential_list.credential.CredentialList :rtype: twilio.rest.api.v2010.account.sip.credential_list.credential.CredentialList """ if self._credentials is None: self....
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Access the credentials :returns: twilio.rest.api.v2010.account.sip.credential_list.credential.CredentialList :rtype: twilio.rest.api.v2010.account.sip.credential_list.credential.CredentialList
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python
train
SeattleTestbed/seash
pyreadline/console/console.py
https://github.com/SeattleTestbed/seash/blob/40f9d2285662ff8b61e0468b4196acee089b273b/pyreadline/console/console.py#L803-L820
def install_readline(hook): '''Set up things for the interpreter to call our function like GNU readline.''' global readline_hook, readline_ref # save the hook so the wrapper can call it readline_hook = hook # get the address of PyOS_ReadlineFunctionPointer so we can update it PyOS_RF...
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Set up things for the interpreter to call our function like GNU readline.
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python
train
mikedh/trimesh
trimesh/path/simplify.py
https://github.com/mikedh/trimesh/blob/25e059bf6d4caa74f62ffd58ce4f61a90ee4e518/trimesh/path/simplify.py#L15-L104
def fit_circle_check(points, scale, prior=None, final=False, verbose=False): """ Fit a circle, and reject the fit if: * the radius is larger than tol.radius_min*scale or tol.radius_max*scale * any segment spans more than...
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Fit a circle, and reject the fit if: * the radius is larger than tol.radius_min*scale or tol.radius_max*scale * any segment spans more than tol.seg_angle * any segment is longer than tol.seg_frac*scale * the fit deviates by more than tol.radius_frac*radius * the segments on the ends deviate from tan...
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python
train
Microsoft/azure-devops-python-api
azure-devops/azure/devops/v5_1/profile_regions/profile_regions_client.py
https://github.com/Microsoft/azure-devops-python-api/blob/4777ffda2f5052fabbaddb2abe9cb434e0cf1aa8/azure-devops/azure/devops/v5_1/profile_regions/profile_regions_client.py#L28-L41
def get_geo_region(self, ip): """GetGeoRegion. [Preview API] Lookup up country/region based on provided IPv4, null if using the remote IPv4 address. :param str ip: :rtype: :class:`<GeoRegion> <azure.devops.v5_1.profile-regions.models.GeoRegion>` """ query_parameters = {} ...
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GetGeoRegion. [Preview API] Lookup up country/region based on provided IPv4, null if using the remote IPv4 address. :param str ip: :rtype: :class:`<GeoRegion> <azure.devops.v5_1.profile-regions.models.GeoRegion>`
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python
train
lipoja/URLExtract
urlextract/cachefile.py
https://github.com/lipoja/URLExtract/blob/b53fd2adfaed3cd23a811aed4d277b0ade7b4640/urlextract/cachefile.py#L77-L94
def _get_default_cache_file_path(self): """ Returns default cache file path :return: default cache file path (to data directory) :rtype: str """ default_list_path = os.path.join( self._get_default_cache_dir(), self._CACHE_FILE_NAME) if not os.access...
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Returns default cache file path :return: default cache file path (to data directory) :rtype: str
[ "Returns", "default", "cache", "file", "path" ]
python
train
evolbioinfo/pastml
pastml/parsimony.py
https://github.com/evolbioinfo/pastml/blob/df8a375841525738383e59548eed3441b07dbd3e/pastml/parsimony.py#L114-L143
def acctran(tree, character, feature=PARS_STATES): """ ACCTRAN (accelerated transformation) (Farris, 1970) aims at reducing the number of ambiguities in the parsimonious result. ACCTRAN forces the state changes to be performed as close to the root as possible, and therefore prioritises the reverse mutat...
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ACCTRAN (accelerated transformation) (Farris, 1970) aims at reducing the number of ambiguities in the parsimonious result. ACCTRAN forces the state changes to be performed as close to the root as possible, and therefore prioritises the reverse mutations. if N is not a tip: L, R <- left and right ch...
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python
train
JdeRobot/base
src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_help.py
https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_help.py#L90-L94
def idle_task(self): '''called on idle''' if self.module('console') is not None and not self.menu_added_console: self.menu_added_console = True self.module('console').add_menu(self.menu)
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called on idle
[ "called", "on", "idle" ]
python
train
fake-name/ChromeController
ChromeController/Generator/Generated.py
https://github.com/fake-name/ChromeController/blob/914dd136184e8f1165c7aa6ef30418aaf10c61f0/ChromeController/Generator/Generated.py#L2889-L2908
def CacheStorage_deleteEntry(self, cacheId, request): """ Function path: CacheStorage.deleteEntry Domain: CacheStorage Method name: deleteEntry Parameters: Required arguments: 'cacheId' (type: CacheId) -> Id of cache where the entry will be deleted. 'request' (type: string) -> URL spec of ...
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Function path: CacheStorage.deleteEntry Domain: CacheStorage Method name: deleteEntry Parameters: Required arguments: 'cacheId' (type: CacheId) -> Id of cache where the entry will be deleted. 'request' (type: string) -> URL spec of the request. No return value. Description: Deletes a ...
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python
train
BYU-PCCL/holodeck
holodeck/environments.py
https://github.com/BYU-PCCL/holodeck/blob/01acd4013f5acbd9f61fbc9caaafe19975e8b121/holodeck/environments.py#L357-L367
def set_control_scheme(self, agent_name, control_scheme): """Set the control scheme for a specific agent. Args: agent_name (str): The name of the agent to set the control scheme for. control_scheme (int): A control scheme value (see :obj:`holodeck.agents.ControlSchemes`) ...
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Set the control scheme for a specific agent. Args: agent_name (str): The name of the agent to set the control scheme for. control_scheme (int): A control scheme value (see :obj:`holodeck.agents.ControlSchemes`)
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python
train
markovmodel/PyEMMA
pyemma/coordinates/data/featurization/featurizer.py
https://github.com/markovmodel/PyEMMA/blob/5c3124398217de05ba5ce9c8fb01519222481ab8/pyemma/coordinates/data/featurization/featurizer.py#L236-L253
def _check_indices(self, pair_inds, pair_n=2): """ensure pairs are valid (shapes, all atom indices available?, etc.) """ pair_inds = np.array(pair_inds).astype(dtype=np.int, casting='safe') if pair_inds.ndim != 2: raise ValueError("pair indices has to be a matrix.") ...
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ensure pairs are valid (shapes, all atom indices available?, etc.)
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python
train
learningequality/morango
morango/api/permissions.py
https://github.com/learningequality/morango/blob/c3ec2554b026f65ac5f0fc5c9d439277fbac14f9/morango/api/permissions.py#L15-L43
def authenticate_credentials(self, userargs, password, request=None): """ Authenticate the userargs and password against Django auth backends. The "userargs" string may be just the username, or a querystring-encoded set of params. """ credentials = { 'password': pass...
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Authenticate the userargs and password against Django auth backends. The "userargs" string may be just the username, or a querystring-encoded set of params.
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python
valid
saltstack/salt
salt/transport/tcp.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/transport/tcp.py#L650-L676
def post_fork(self, payload_handler, io_loop): ''' After forking we need to create all of the local sockets to listen to the router payload_handler: function to call with your payloads ''' self.payload_handler = payload_handler self.io_loop = io_loop self...
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After forking we need to create all of the local sockets to listen to the router payload_handler: function to call with your payloads
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python
train
camsci/meteor-pi
src/pythonModules/meteorpi_client/meteorpi_client/__init__.py
https://github.com/camsci/meteor-pi/blob/7b01527650bd1b2b76d6f364e8122e25b8812c8d/src/pythonModules/meteorpi_client/meteorpi_client/__init__.py#L133-L158
def search_files(self, search=None): """ Search for files, returning a FileRecord for each result. FileRecords have two additional methods patched into them, get_url() and download_to(file_name), which will retrieve the URL for the file content and download that content to a named file o...
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Search for files, returning a FileRecord for each result. FileRecords have two additional methods patched into them, get_url() and download_to(file_name), which will retrieve the URL for the file content and download that content to a named file on disk, respectively. :param FileRecordSearch se...
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python
train
wummel/linkchecker
third_party/dnspython/dns/rdatatype.py
https://github.com/wummel/linkchecker/blob/c2ce810c3fb00b895a841a7be6b2e78c64e7b042/third_party/dnspython/dns/rdatatype.py#L214-L222
def is_metatype(rdtype): """True if the type is a metatype. @param rdtype: the type @type rdtype: int @rtype: bool""" if rdtype >= TKEY and rdtype <= ANY or rdtype in _metatypes: return True return False
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True if the type is a metatype. @param rdtype: the type @type rdtype: int @rtype: bool
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python
train
joopert/nad_receiver
nad_receiver/__init__.py
https://github.com/joopert/nad_receiver/blob/416de0173a330c75cc73f9c90b0c5df32e5e0ba3/nad_receiver/__init__.py#L320-L365
def exec_command(self, domain, function, operator, value=None): """ Write a command to the receiver and read the value it returns. """ if operator in CMDS[domain][function]['supported_operators']: if operator is '=' and value is None: raise ValueError('No valu...
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Write a command to the receiver and read the value it returns.
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python
test
SatelliteQE/nailgun
nailgun/config.py
https://github.com/SatelliteQE/nailgun/blob/c36d8c20862e87bf6975bd48ac1ca40a9e634eaa/nailgun/config.py#L194-L235
def save(self, label='default', path=None): """Save the current connection configuration to a file. This method is thread safe. :param label: A string. An identifier for the current configuration. This allows multiple configurations with unique labels to be saved in a s...
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Save the current connection configuration to a file. This method is thread safe. :param label: A string. An identifier for the current configuration. This allows multiple configurations with unique labels to be saved in a single file. If a configuration identified by ``label`` ...
[ "Save", "the", "current", "connection", "configuration", "to", "a", "file", "." ]
python
train
aws/aws-xray-sdk-python
aws_xray_sdk/core/sampling/sampling_rule.py
https://github.com/aws/aws-xray-sdk-python/blob/707358cd3a516d51f2ebf71cf34f00e8d906a667/aws_xray_sdk/core/sampling/sampling_rule.py#L55-L69
def snapshot_statistics(self): """ Take a snapshot of request/borrow/sampled count for reporting back to X-Ray back-end by ``TargetPoller`` and reset those counters. """ with self._lock: stats = { 'request_count': self.request_count, '...
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Take a snapshot of request/borrow/sampled count for reporting back to X-Ray back-end by ``TargetPoller`` and reset those counters.
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python
train
Parsely/birding
src/birding/config.py
https://github.com/Parsely/birding/blob/c7f6eee56424234e361b1a455595de202e744dac/src/birding/config.py#L189-L224
def overlay(upper, lower): """Return the overlay of `upper` dict onto `lower` dict. This operation is similar to `dict.update`, but recurses when it encounters a dict/mapping, as to allow nested leaf values in the lower collection which are not in the upper collection. Whenever the upper collection has...
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Return the overlay of `upper` dict onto `lower` dict. This operation is similar to `dict.update`, but recurses when it encounters a dict/mapping, as to allow nested leaf values in the lower collection which are not in the upper collection. Whenever the upper collection has a value, its value is used. ...
[ "Return", "the", "overlay", "of", "upper", "dict", "onto", "lower", "dict", "." ]
python
train
phn/lineid_plot
lineid_plot/lineid_plot.py
https://github.com/phn/lineid_plot/blob/7c7a1af53fe439b3a7c5a57f01680575837fb978/lineid_plot/lineid_plot.py#L233-L239
def initial_annotate_kwargs(): """Return default parameters passed to Axes.annotate to create labels.""" return dict( xycoords="data", textcoords="data", rotation=90, horizontalalignment="center", verticalalignment="center", arrowprops=dict(arrowstyle="-", relpos=(0.5, 0.0)) )
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Return default parameters passed to Axes.annotate to create labels.
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python
train
Rapptz/discord.py
discord/channel.py
https://github.com/Rapptz/discord.py/blob/05d4f7f9620ef33635d6ac965b26528e09cdaf5b/discord/channel.py#L740-L745
async def create_voice_channel(self, name, *, overwrites=None, reason=None, **options): """|coro| A shortcut method to :meth:`Guild.create_voice_channel` to create a :class:`VoiceChannel` in the category. """ return await self.guild.create_voice_channel(name, overwrites=overwrites, cate...
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|coro| A shortcut method to :meth:`Guild.create_voice_channel` to create a :class:`VoiceChannel` in the category.
[ "|coro|" ]
python
train
DistrictDataLabs/yellowbrick
yellowbrick/contrib/missing/bar.py
https://github.com/DistrictDataLabs/yellowbrick/blob/59b67236a3862c73363e8edad7cd86da5b69e3b2/yellowbrick/contrib/missing/bar.py#L142-L163
def draw_stacked_bar(self, nan_col_counts): """Draws a horizontal stacked bar chart with different colors for each count of nan values per label. """ for index, nan_values in enumerate(nan_col_counts): label, nan_col_counts = nan_values if index == 0: ...
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Draws a horizontal stacked bar chart with different colors for each count of nan values per label.
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python
train
globocom/GloboNetworkAPI-client-python
networkapiclient/GrupoL3.py
https://github.com/globocom/GloboNetworkAPI-client-python/blob/cf34f913da48d9abbf750114f5d2ac4b2dde137d/networkapiclient/GrupoL3.py#L82-L108
def alterar(self, id_groupl3, name): """Change Group L3 from by the identifier. :param id_groupl3: Identifier of the Group L3. Integer value and greater than zero. :param name: Group L3 name. String with a minimum 2 and maximum of 80 characters :return: None :raise InvalidPara...
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Change Group L3 from by the identifier. :param id_groupl3: Identifier of the Group L3. Integer value and greater than zero. :param name: Group L3 name. String with a minimum 2 and maximum of 80 characters :return: None :raise InvalidParameterError: The identifier of Group L3 or name i...
[ "Change", "Group", "L3", "from", "by", "the", "identifier", "." ]
python
train
kolypto/py-good
good/schema/compiler.py
https://github.com/kolypto/py-good/blob/192ef19e79f6fd95c1cbd7c378a3074c7ad7a6d4/good/schema/compiler.py#L266-L295
def _compile_literal(self, schema): """ Compile literal schema: type and value matching """ # Prepare self self.compiled_type = const.COMPILED_TYPE.LITERAL self.name = get_literal_name(schema) # Error partials schema_type = type(schema) err_type = self.Invalid(_...
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Compile literal schema: type and value matching
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python
train
volafiled/python-volapi
volapi/volapi.py
https://github.com/volafiled/python-volapi/blob/5f0bc03dbde703264ac6ed494e2050761f688a3e/volapi/volapi.py#L348-L355
def run_queues(self): """Run all queues that have data queued""" if self.exception: # pylint: disable=raising-bad-type raise self.exception listeners = self.__listeners_for_thread return sum(l.process() for l in listeners) > 0
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Run all queues that have data queued
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python
train
watson-developer-cloud/python-sdk
ibm_watson/assistant_v1.py
https://github.com/watson-developer-cloud/python-sdk/blob/4c2c9df4466fcde88975da9ecd834e6ba95eb353/ibm_watson/assistant_v1.py#L5987-L5997
def _to_dict(self): """Return a json dictionary representing this model.""" _dict = {} if hasattr(self, 'text') and self.text is not None: _dict['text'] = self.text if hasattr(self, '_additionalProperties'): for _key in self._additionalProperties: ...
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Return a json dictionary representing this model.
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python
train
pazz/urwidtrees
urwidtrees/nested.py
https://github.com/pazz/urwidtrees/blob/d1fa38ce4f37db00bdfc574b856023b5db4c7ead/urwidtrees/nested.py#L94-L100
def _get_subtree_for(self, pos): """returns Tree that manages pos[-1]""" res = self._tree candidate = self._lookup_entry(self._tree, pos[:-1]) if isinstance(candidate, Tree): res = candidate return res
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returns Tree that manages pos[-1]
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python
train
KrishnaswamyLab/graphtools
graphtools/graphs.py
https://github.com/KrishnaswamyLab/graphtools/blob/44685352be7df2005d44722903092207967457f2/graphtools/graphs.py#L595-L635
def build_landmark_op(self): """Build the landmark operator Calculates spectral clusters on the kernel, and calculates transition probabilities between cluster centers by using transition probabilities between samples assigned to each cluster. """ tasklogger.log_start("l...
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Build the landmark operator Calculates spectral clusters on the kernel, and calculates transition probabilities between cluster centers by using transition probabilities between samples assigned to each cluster.
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python
train
rtfd/recommonmark
recommonmark/transform.py
https://github.com/rtfd/recommonmark/blob/815d75ea503f30af26ab67c6820078f84875b1fc/recommonmark/transform.py#L262-L283
def find_replace(self, node): """Try to find replace node for current node. Parameters ---------- node : docutil node Node to find replacement for. Returns ------- nodes : node or list of node The replacement nodes of current node. ...
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Try to find replace node for current node. Parameters ---------- node : docutil node Node to find replacement for. Returns ------- nodes : node or list of node The replacement nodes of current node. Returns None if no replacement can ...
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python
train
LogicalDash/LiSE
ELiDE/ELiDE/game.py
https://github.com/LogicalDash/LiSE/blob/fe6fd4f0a7c1780e065f4c9babb9bc443af6bb84/ELiDE/ELiDE/game.py#L189-L199
def wait_command(self, start_func, turns=1, end_func=None): """Call ``start_func``, and wait to call ``end_func`` after simulating ``turns`` (default 1) :param start_func: function to call before waiting :param turns: number of turns to wait :param end_func: function to call after waiti...
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Call ``start_func``, and wait to call ``end_func`` after simulating ``turns`` (default 1) :param start_func: function to call before waiting :param turns: number of turns to wait :param end_func: function to call after waiting :return: ``None``
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python
train
mar10/wsgidav
wsgidav/server/server_cli.py
https://github.com/mar10/wsgidav/blob/cec0d84222fc24bea01be1cea91729001963f172/wsgidav/server/server_cli.py#L520-L603
def _run__cherrypy(app, config, mode): """Run WsgiDAV using cherrypy.wsgiserver if CherryPy is installed.""" assert mode == "cherrypy-wsgiserver" try: from cherrypy import wsgiserver from cherrypy.wsgiserver.ssl_builtin import BuiltinSSLAdapter _logger.warning("WARNING: cherrypy.ws...
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Run WsgiDAV using cherrypy.wsgiserver if CherryPy is installed.
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python
valid
davidchua/pymessenger
pymessenger/bot.py
https://github.com/davidchua/pymessenger/blob/c3aedb65b7a50e0ec82c0df39a566fceec734c85/pymessenger/bot.py#L177-L187
def send_image(self, recipient_id, image_path, notification_type=NotificationType.regular): """Send an image to the specified recipient. Image must be PNG or JPEG or GIF (more might be supported). https://developers.facebook.com/docs/messenger-platform/send-api-reference/image-attachment ...
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Send an image to the specified recipient. Image must be PNG or JPEG or GIF (more might be supported). https://developers.facebook.com/docs/messenger-platform/send-api-reference/image-attachment Input: recipient_id: recipient id to send to image_path: path to image to be s...
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python
train
a1ezzz/wasp-general
wasp_general/signals/signals.py
https://github.com/a1ezzz/wasp-general/blob/1029839d33eb663f8dec76c1c46754d53c1de4a9/wasp_general/signals/signals.py#L299-L304
def stop_proxying(self, signal_source, *signal_names, weak_ref=False): """ :meth:`.WSignalProxyProto.stop_proxying` implementation """ callback = self.__callback if weak_ref is False else self.__weak_ref_callback for signal_name in signal_names: signal_source.remove_callback(signal_name, callback)
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:meth:`.WSignalProxyProto.stop_proxying` implementation
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python
train
has2k1/plotnine
plotnine/utils.py
https://github.com/has2k1/plotnine/blob/566e579af705367e584fb27a74e6c5199624ca89/plotnine/utils.py#L398-L424
def defaults(d1, d2): """ Update a copy of d1 with the contents of d2 that are not in d1. d1 and d2 are dictionary like objects. Parameters ---------- d1 : dict | dataframe dict with the preferred values d2 : dict | dataframe dict with the default values Returns ---...
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Update a copy of d1 with the contents of d2 that are not in d1. d1 and d2 are dictionary like objects. Parameters ---------- d1 : dict | dataframe dict with the preferred values d2 : dict | dataframe dict with the default values Returns ------- out : dict | dataframe ...
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python
train
brocade/pynos
pynos/versions/base/yang/tailf_netconf_transactions.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/base/yang/tailf_netconf_transactions.py#L42-L55
def start_transaction_input_target_target_candidate_candidate(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") start_transaction = ET.Element("start_transaction") config = start_transaction input = ET.SubElement(start_transaction, "input") ...
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Auto Generated Code
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python
train
google/transitfeed
transitfeed/shapelib.py
https://github.com/google/transitfeed/blob/eb2991a3747ba541b2cb66502b305b6304a1f85f/transitfeed/shapelib.py#L413-L423
def FindMatchingPolys(self, start_point, end_point, max_radius=150): """ Returns a list of polylines in the collection that have endpoints within max_radius of the given start and end points. """ matches = [] for shape in self._name_to_shape.itervalues(): if start_point.GetDistanceMeters(s...
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Returns a list of polylines in the collection that have endpoints within max_radius of the given start and end points.
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python
train
mdickinson/bigfloat
bigfloat/core.py
https://github.com/mdickinson/bigfloat/blob/e5fdd1048615191ed32a2b7460e14b3b3ff24662/bigfloat/core.py#L1805-L1815
def cosh(x, context=None): """ Return the hyperbolic cosine of x. """ return _apply_function_in_current_context( BigFloat, mpfr.mpfr_cosh, (BigFloat._implicit_convert(x),), context, )
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Return the hyperbolic cosine of x.
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python
train
geophysics-ubonn/reda
lib/reda/utils/filter_config_types.py
https://github.com/geophysics-ubonn/reda/blob/46a939729e40c7c4723315c03679c40761152e9e/lib/reda/utils/filter_config_types.py#L100-L155
def _filter_dipole_dipole(configs): """Filter dipole-dipole configurations A dipole-dipole configuration is defined using the following criteria: * equal distance between the two current electrodes and between the two voltage electrodes * no overlap of dipoles Parameters ---...
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Filter dipole-dipole configurations A dipole-dipole configuration is defined using the following criteria: * equal distance between the two current electrodes and between the two voltage electrodes * no overlap of dipoles Parameters ---------- configs: numpy.ndarray ...
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python
train
OCR-D/core
ocrd/ocrd/workspace.py
https://github.com/OCR-D/core/blob/57e68c578526cb955fd2e368207f5386c459d91d/ocrd/ocrd/workspace.py#L58-L71
def download_url(self, url, **kwargs): """ Download a URL to the workspace. Args: url (string): URL to download to directory **kwargs : See :py:mod:`ocrd.resolver.Resolver` Returns: The local filename of the downloaded file """ if sel...
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Download a URL to the workspace. Args: url (string): URL to download to directory **kwargs : See :py:mod:`ocrd.resolver.Resolver` Returns: The local filename of the downloaded file
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python
train
xmikos/soapy_power
soapypower/power.py
https://github.com/xmikos/soapy_power/blob/46e12659b8d08af764dc09a1f31b0e85a68f808f/soapypower/power.py#L274-L330
def sweep(self, min_freq, max_freq, bins, repeats, runs=0, time_limit=0, overlap=0, fft_window='hann', fft_overlap=0.5, crop=False, log_scale=True, remove_dc=False, detrend=None, lnb_lo=0, tune_delay=0, reset_stream=False, base_buffer_size=0, max_buffer_size=0, max_threads=0, max_queue_size=...
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Sweep spectrum using frequency hopping
[ "Sweep", "spectrum", "using", "frequency", "hopping" ]
python
test
ucbvislab/radiotool
radiotool/composer/composition.py
https://github.com/ucbvislab/radiotool/blob/01c9d878a811cf400b1482896d641d9c95e83ded/radiotool/composer/composition.py#L175-L203
def extended_fade_in(self, segment, duration): """Add a fade-in to a segment that extends the beginning of the segment. :param segment: Segment to fade in :type segment: :py:class:`radiotool.composer.Segment` :param duration: Duration of fade-in (in seconds) :returns: Th...
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Add a fade-in to a segment that extends the beginning of the segment. :param segment: Segment to fade in :type segment: :py:class:`radiotool.composer.Segment` :param duration: Duration of fade-in (in seconds) :returns: The fade that has been added to the composition :rty...
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python
train
SuperCowPowers/workbench
workbench_apps/workbench_cli/workbench_shell.py
https://github.com/SuperCowPowers/workbench/blob/710232756dd717f734253315e3d0b33c9628dafb/workbench_apps/workbench_cli/workbench_shell.py#L276-L296
def _connect(self, server_info): """Connect to the workbench server""" # First we do a temp connect with a short heartbeat _tmp_connect = zerorpc.Client(timeout=300, heartbeat=2) _tmp_connect.connect('tcp://'+server_info['server']+':'+server_info['port']) try: _tmp_c...
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Connect to the workbench server
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python
train
SmartTeleMax/iktomi
iktomi/auth.py
https://github.com/SmartTeleMax/iktomi/blob/80bc0f1408d63efe7f5844367d1f6efba44b35f2/iktomi/auth.py#L104-L126
def login(self, template='login'): ''' This property will return component which will handle login requests. auth.login(template='login.html') ''' def _login(env, data): form = self._login_form(env) next = env.request.GET.get('next', '/') ...
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This property will return component which will handle login requests. auth.login(template='login.html')
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python
train
google/grr
grr/server/grr_response_server/flows/general/filesystem.py
https://github.com/google/grr/blob/5cef4e8e2f0d5df43ea4877e9c798e0bf60bfe74/grr/server/grr_response_server/flows/general/filesystem.py#L818-L833
def FindNode(self, component_path): """Find the node in the component_tree from component_path. Args: component_path: A list of components which reference a node in the component tree. This allows us to resume processing in the tree. Returns: A node in the component_tree. """ #...
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Find the node in the component_tree from component_path. Args: component_path: A list of components which reference a node in the component tree. This allows us to resume processing in the tree. Returns: A node in the component_tree.
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python
train
heikomuller/sco-datastore
scodata/image.py
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/image.py#L410-L430
def get_directory(self, identifier): """Implements the policy for naming directories for image objects. Image object directories are name by their identifier. In addition, these directories are grouped in parent directories named by the first two characters of the identifier. The aim is ...
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Implements the policy for naming directories for image objects. Image object directories are name by their identifier. In addition, these directories are grouped in parent directories named by the first two characters of the identifier. The aim is to avoid having too many sub-folders in ...
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python
train
quantumlib/Cirq
dev_tools/auto_merge.py
https://github.com/quantumlib/Cirq/blob/0827da80dd7880e5b923eb69407e980ed9bc0bd2/dev_tools/auto_merge.py#L203-L220
def edit_comment(repo: GithubRepository, text: str, comment_id: int) -> None: """ References: https://developer.github.com/v3/issues/comments/#edit-a-comment """ url = ("https://api.github.com/repos/{}/{}/issues/comments/{}" "?access_token={}".format(repo.organization, ...
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References: https://developer.github.com/v3/issues/comments/#edit-a-comment
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python
train
Nic30/hwt
hwt/hdl/statements.py
https://github.com/Nic30/hwt/blob/8cbb399e326da3b22c233b98188a9d08dec057e6/hwt/hdl/statements.py#L564-L578
def isSameStatementList(stmListA: List[HdlStatement], stmListB: List[HdlStatement]) -> bool: """ :return: True if two lists of HdlStatement instances are same """ if stmListA is stmListB: return True if stmListA is None or stmListB is None: return False f...
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:return: True if two lists of HdlStatement instances are same
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python
test
rdussurget/py-altimetry
altimetry/tools/nctools.py
https://github.com/rdussurget/py-altimetry/blob/57ce7f2d63c6bbc4993821af0bbe46929e3a2d98/altimetry/tools/nctools.py#L73-L83
def add(self,dimlist,dimvalues): ''' add dimensions :parameter dimlist: list of dimensions :parameter dimvalues: list of values for dimlist ''' for i,d in enumerate(dimlist): self[d] = dimvalues[i] self.set_ndims()
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add dimensions :parameter dimlist: list of dimensions :parameter dimvalues: list of values for dimlist
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python
train
flypenguin/python-cattleprod
cattleprod/__init__.py
https://github.com/flypenguin/python-cattleprod/blob/05043c91de78d211968db65413d3db4fd44c89e4/cattleprod/__init__.py#L55-L76
def poke(url, accesskey=None, secretkey=None, __method__='GET', **req_args): """ Poke the Rancher API. Returns a Rod object instance. Central starting point for the cattleprod package. :param url: The full Rancher URL to the API endpoint. :param accesskey: The rancher access key, optional. :para...
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Poke the Rancher API. Returns a Rod object instance. Central starting point for the cattleprod package. :param url: The full Rancher URL to the API endpoint. :param accesskey: The rancher access key, optional. :param secretkey: The rancher secret key, optional. :param __method__: Internal method, do...
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python
train
balloob/pychromecast
pychromecast/__init__.py
https://github.com/balloob/pychromecast/blob/831b09c4fed185a7bffe0ea330b7849d5f4e36b6/pychromecast/__init__.py#L315-L331
def wait(self, timeout=None): """ Waits until the cast device is ready for communication. The device is ready as soon a status message has been received. If the worker thread is not already running, it will be started. If the status has already been received then the method ret...
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Waits until the cast device is ready for communication. The device is ready as soon a status message has been received. If the worker thread is not already running, it will be started. If the status has already been received then the method returns immediately. :param timeout:...
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python
train
attm2x/m2x-python
m2x/v2/devices.py
https://github.com/attm2x/m2x-python/blob/df83f590114692b1f96577148b7ba260065905bb/m2x/v2/devices.py#L156-L167
def post_update(self, **values): """ Method for `Post Device Update (Single Values to Multiple Streams) <https://m2x.att.com/developer/documentation/v2/device#Post-Device-Update--Single-Values-to-Multiple-Streams->` endpoint. :param values: The values being posted, formatted according to the API docs ...
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Method for `Post Device Update (Single Values to Multiple Streams) <https://m2x.att.com/developer/documentation/v2/device#Post-Device-Update--Single-Values-to-Multiple-Streams->` endpoint. :param values: The values being posted, formatted according to the API docs :type values: dict :return: T...
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python
test
ARMmbed/icetea
icetea_lib/Plugin/PluginManager.py
https://github.com/ARMmbed/icetea/blob/b2b97ac607429830cf7d62dae2e3903692c7c778/icetea_lib/Plugin/PluginManager.py#L161-L173
def load_default_run_plugins(self): """ Load default run level plugins from icetea_lib.Plugin.plugins.default_plugins. :return: Nothing """ for plugin_name, plugin_class in default_plugins.items(): if issubclass(plugin_class, RunPluginBase): try: ...
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Load default run level plugins from icetea_lib.Plugin.plugins.default_plugins. :return: Nothing
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python
train
foremast/foremast
src/foremast/pipeline/clean_pipelines.py
https://github.com/foremast/foremast/blob/fb70f29b8ce532f061685a17d120486e47b215ba/src/foremast/pipeline/clean_pipelines.py#L28-L47
def delete_pipeline(app='', pipeline_name=''): """Delete _pipeline_name_ from _app_.""" safe_pipeline_name = normalize_pipeline_name(name=pipeline_name) LOG.warning('Deleting Pipeline: %s', safe_pipeline_name) url = '{host}/pipelines/{app}/{pipeline}'.format(host=API_URL, app=app, pipeline=safe_pipeli...
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Delete _pipeline_name_ from _app_.
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python
train
TheHive-Project/Cortex-Analyzers
analyzers/GreyNoise/greynoise.py
https://github.com/TheHive-Project/Cortex-Analyzers/blob/8dae6a8c4cf9af5554ae8c844985c4b44d4bd4bf/analyzers/GreyNoise/greynoise.py#L16-L44
def _get_level(current_level, new_intention): """ Map GreyNoise intentions to Cortex maliciousness levels. Accept a Cortex level and a GreyNoise intention, the return the more malicious of the two. :param current_level: A Cortex maliciousness level https://github.com/TheHive...
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Map GreyNoise intentions to Cortex maliciousness levels. Accept a Cortex level and a GreyNoise intention, the return the more malicious of the two. :param current_level: A Cortex maliciousness level https://github.com/TheHive-Project/CortexDocs/blob/master/api/how-to-create-an-analyzer.md#o...
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python
train
GoogleCloudPlatform/appengine-mapreduce
python/src/mapreduce/handlers.py
https://github.com/GoogleCloudPlatform/appengine-mapreduce/blob/2045eb3605b6ecb40c83d11dd5442a89fe5c5dd6/python/src/mapreduce/handlers.py#L1582-L1602
def _check_mr_state(cls, state, mr_id): """Check MapreduceState. Args: state: an MapreduceState instance. mr_id: mapreduce id. Returns: True if state is valid. False if not and this task should be dropped. """ if state is None: logging.warning( "Mapreduce State fo...
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Check MapreduceState. Args: state: an MapreduceState instance. mr_id: mapreduce id. Returns: True if state is valid. False if not and this task should be dropped.
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python
train
bcbio/bcbio-nextgen
bcbio/qc/qsignature.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/qc/qsignature.py#L186-L194
def _slice_vcf_chr21(vcf_file, out_dir): """ Slice chr21 of qsignature SNPs to reduce computation time """ tmp_file = os.path.join(out_dir, "chr21_qsignature.vcf") if not utils.file_exists(tmp_file): cmd = ("grep chr21 {vcf_file} > {tmp_file}").format(**locals()) out = subprocess.che...
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Slice chr21 of qsignature SNPs to reduce computation time
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python
train
buriburisuri/sugartensor
sugartensor/sg_layer.py
https://github.com/buriburisuri/sugartensor/blob/d2c039954777c7fbe3eb0c2ae40c45c9854deb40/sugartensor/sg_layer.py#L33-L58
def sg_dense(tensor, opt): r"""Applies a full connection. Args: tensor: A 2-D tensor (automatically passed by decorator). opt: in_dim: An `integer`. The size of input dimension. dim: An `integer`. The size of output dimension. bias: Boolean. If True, biases are added. ...
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r"""Applies a full connection. Args: tensor: A 2-D tensor (automatically passed by decorator). opt: in_dim: An `integer`. The size of input dimension. dim: An `integer`. The size of output dimension. bias: Boolean. If True, biases are added. regularizer: A (Tensor -...
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python
train
senaite/senaite.core
bika/lims/content/contact.py
https://github.com/senaite/senaite.core/blob/7602ce2ea2f9e81eb34e20ce17b98a3e70713f85/bika/lims/content/contact.py#L309-L316
def _addLocalOwnerRole(self, username): """Add local owner role from parent object """ parent = self.getParent() if parent.portal_type == "Client": parent.manage_setLocalRoles(username, ["Owner", ]) # reindex object security self._recursive_reindex_obj...
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Add local owner role from parent object
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python
train