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aganezov/bg
bg/grimm.py
https://github.com/aganezov/bg/blob/1ec758193441e49e7b34e0da09571480f4c24455/bg/grimm.py#L342-L360
def get_blocks_in_grimm_from_breakpoint_graph(bg): """ :param bg: a breakpoint graph, that contians all the information :type bg: ``bg.breakpoint_graph.BreakpointGraph`` :return: list of strings, which represent genomes present in breakpoint graph as orders of blocks and is compatible wi...
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:param bg: a breakpoint graph, that contians all the information :type bg: ``bg.breakpoint_graph.BreakpointGraph`` :return: list of strings, which represent genomes present in breakpoint graph as orders of blocks and is compatible with GRIMM format
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python
train
uw-it-aca/django-saferecipient-email-backend
saferecipient/__init__.py
https://github.com/uw-it-aca/django-saferecipient-email-backend/blob/8af20dece5a668d6bcad5dea75cc60871a4bd9fa/saferecipient/__init__.py#L56-L61
def _is_whitelisted(self, email): """Check if an email is in the whitelist. If there's no whitelist, it's assumed it's not whitelisted.""" return hasattr(settings, "SAFE_EMAIL_WHITELIST") and \ any(re.match(m, email) for m in settings.SAFE_EMAIL_WHITELIST)
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Check if an email is in the whitelist. If there's no whitelist, it's assumed it's not whitelisted.
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python
train
quantumlib/Cirq
cirq/linalg/diagonalize.py
https://github.com/quantumlib/Cirq/blob/0827da80dd7880e5b923eb69407e980ed9bc0bd2/cirq/linalg/diagonalize.py#L153-L230
def bidiagonalize_real_matrix_pair_with_symmetric_products( mat1: np.ndarray, mat2: np.ndarray, *, rtol: float = 1e-5, atol: float = 1e-8, check_preconditions: bool = True) -> Tuple[np.ndarray, np.ndarray]: """Finds orthogonal matrices that diagonalize both mat1 and m...
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Finds orthogonal matrices that diagonalize both mat1 and mat2. Requires mat1 and mat2 to be real. Requires mat1.T @ mat2 to be symmetric. Requires mat1 @ mat2.T to be symmetric. Args: mat1: One of the real matrices. mat2: The other real matrix. rtol: Relative numeric error thre...
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python
train
dshean/pygeotools
pygeotools/lib/filtlib.py
https://github.com/dshean/pygeotools/blob/5ac745717c0098d01eb293ff1fe32fd7358c76ab/pygeotools/lib/filtlib.py#L341-L380
def median_fltr_skimage(dem, radius=3, erode=1, origmask=False): """ Older skimage.filter.median_filter This smooths, removes noise and fills in nodata areas with median of valid pixels! Effectively an inpainting routine """ #Note, ndimage doesn't properly handle ma - convert to nan dem = mali...
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Older skimage.filter.median_filter This smooths, removes noise and fills in nodata areas with median of valid pixels! Effectively an inpainting routine
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python
train
bcbio/bcbio-nextgen
bcbio/pipeline/run_info.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/pipeline/run_info.py#L850-L871
def _sanity_check_files(item, files): """Ensure input files correspond with supported approaches. Handles BAM, fastqs, plus split fastqs. """ msg = None file_types = set([("bam" if x.endswith(".bam") else "fastq") for x in files if x]) if len(file_types) > 1: msg = "Found multiple file ...
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Ensure input files correspond with supported approaches. Handles BAM, fastqs, plus split fastqs.
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python
train
adrienverge/yamllint
yamllint/rules/common.py
https://github.com/adrienverge/yamllint/blob/fec2c2fba736cabf6bee6b5eeb905cab0dc820f6/yamllint/rules/common.py#L51-L58
def get_line_indent(token): """Finds the indent of the line the token starts in.""" start = token.start_mark.buffer.rfind('\n', 0, token.start_mark.pointer) + 1 content = start while token.start_mark.buffer[content] == ' ': content += 1 return conten...
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python
train
note35/sinon
sinon/lib/stub.py
https://github.com/note35/sinon/blob/f1d551b679b393d64d926a8a279320904c38d0f5/sinon/lib/stub.py#L89-L99
def __get_call_count(self, args, kwargs, args_list, kwargs_list): """ Args: args: tuple, the arguments inputed by the user kwargs: dictionary, the keyword arguments inputed by the user args_list: list, the tuples of args from all the times this stub was called ...
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Args: args: tuple, the arguments inputed by the user kwargs: dictionary, the keyword arguments inputed by the user args_list: list, the tuples of args from all the times this stub was called kwargs_list: list, the dictionaries of kwargs from all the times this stub was ca...
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python
train
mitsei/dlkit
dlkit/handcar/learning/sessions.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/handcar/learning/sessions.py#L3754-L3773
def get_objective_bank_form_for_create(self, objective_bank_record_types=None): """Gets the objective bank form for creating new objective banks. A new form should be requested for each create transaction. arg: objectiveBankRecordTypes (osid.type.Type): array of objective bank...
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Gets the objective bank form for creating new objective banks. A new form should be requested for each create transaction. arg: objectiveBankRecordTypes (osid.type.Type): array of objective bank record types return: (osid.learning.ObjectiveBankForm) - the objective bank ...
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python
train
google/grr
grr/core/grr_response_core/lib/rdfvalues/client.py
https://github.com/google/grr/blob/5cef4e8e2f0d5df43ea4877e9c798e0bf60bfe74/grr/core/grr_response_core/lib/rdfvalues/client.py#L534-L572
def FromCurrentSystem(cls): """Fill a Uname from the currently running platform.""" uname = platform.uname() fqdn = socket.getfqdn() system = uname[0] architecture, _ = platform.architecture() if system == "Windows": service_pack = platform.win32_ver()[2] kernel = uname[3] # 5.1.260...
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Fill a Uname from the currently running platform.
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python
train
googledatalab/pydatalab
solutionbox/ml_workbench/tensorflow/trainer/feature_transforms.py
https://github.com/googledatalab/pydatalab/blob/d9031901d5bca22fe0d5925d204e6698df9852e1/solutionbox/ml_workbench/tensorflow/trainer/feature_transforms.py#L503-L531
def csv_header_and_defaults(features, schema, stats, keep_target): """Gets csv header and default lists.""" target_name = get_target_name(features) if keep_target and not target_name: raise ValueError('Cannot find target transform') csv_header = [] record_defaults = [] for col in schema: if not ke...
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Gets csv header and default lists.
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python
train
SpriteLink/NIPAP
nipap-www/nipapwww/controllers/version.py
https://github.com/SpriteLink/NIPAP/blob/f96069f11ab952d80b13cab06e0528f2d24b3de9/nipap-www/nipapwww/controllers/version.py#L14-L25
def index(self): """ Display NIPAP version info """ c.pynipap_version = pynipap.__version__ try: c.nipapd_version = pynipap.nipapd_version() except: c.nipapd_version = 'unknown' c.nipap_db_version = pynipap.nipap_db_version() return rende...
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Display NIPAP version info
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python
train
TheHive-Project/TheHive4py
thehive4py/api.py
https://github.com/TheHive-Project/TheHive4py/blob/35762bbd50d8376943268464326b59c752d6241b/thehive4py/api.py#L145-L164
def update_case_task(self, task): """ :Updates TheHive Task :param case: The task to update. The task's `id` determines which Task to update. :return: """ req = self.url + "/api/case/task/{}".format(task.id) # Choose which attributes to send update_keys =...
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:Updates TheHive Task :param case: The task to update. The task's `id` determines which Task to update. :return:
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python
train
andreikop/qutepart
qutepart/__init__.py
https://github.com/andreikop/qutepart/blob/109d76b239751318bcef06f39b2fbbf18687a40b/qutepart/__init__.py#L1266-L1285
def _currentLineExtraSelections(self): """QTextEdit.ExtraSelection, which highlightes current line """ if self._currentLineColor is None: return [] def makeSelection(cursor): selection = QTextEdit.ExtraSelection() selection.format.setBackground(self._...
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QTextEdit.ExtraSelection, which highlightes current line
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python
train
ARMmbed/icetea
icetea_lib/tools/GenericProcess.py
https://github.com/ARMmbed/icetea/blob/b2b97ac607429830cf7d62dae2e3903692c7c778/icetea_lib/tools/GenericProcess.py#L132-L164
def _read_select_poll(poll): """ Read PIPEs using select.poll() method Available on Linux and some Unixes """ npipes = len(NonBlockingStreamReader._streams) for stream_descr in NonBlockingStreamReader._streams: if not stream_descr.has_error: po...
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Read PIPEs using select.poll() method Available on Linux and some Unixes
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python
train
log2timeline/plaso
plaso/parsers/interface.py
https://github.com/log2timeline/plaso/blob/9c564698d2da3ffbe23607a3c54c0582ea18a6cc/plaso/parsers/interface.py#L170-L187
def RegisterPlugin(cls, plugin_class): """Registers a plugin class. The plugin classes are identified based on their lower case name. Args: plugin_class (type): class of the plugin. Raises: KeyError: if plugin class is already set for the corresponding name. """ plugin_name = plug...
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Registers a plugin class. The plugin classes are identified based on their lower case name. Args: plugin_class (type): class of the plugin. Raises: KeyError: if plugin class is already set for the corresponding name.
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python
train
storax/upme
src/upme/main.py
https://github.com/storax/upme/blob/41c2d91f922691e31ff940f33b755d2cb64dfef8/src/upme/main.py#L8-L29
def get_required(dist): """Return a set with all distributions that are required of dist This also includes subdependencies and the given distribution. :param dist: the distribution to query. Can also be the name of the distribution :type dist: :class:`pkg_resources.Distribution` | str :returns: a...
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python
train
senaite/senaite.core
bika/lims/browser/analysisrequest/reject_samples.py
https://github.com/senaite/senaite.core/blob/7602ce2ea2f9e81eb34e20ce17b98a3e70713f85/bika/lims/browser/analysisrequest/reject_samples.py#L147-L161
def get_samples_data(self): """Returns a list of Samples data (dictionary) """ for obj in self.get_samples_from_request(): yield { "obj": obj, "id": api.get_id(obj), "uid": api.get_uid(obj), "title": api.get_title(obj), ...
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Returns a list of Samples data (dictionary)
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python
train
StackStorm/pybind
pybind/slxos/v17r_1_01a/interface/port_channel/logical_interface/port_channel/pc_cmd_container_dummy/service_instance_vlan_cmds_dummy_container/get_untagged_vlan_dummy/__init__.py
https://github.com/StackStorm/pybind/blob/44c467e71b2b425be63867aba6e6fa28b2cfe7fb/pybind/slxos/v17r_1_01a/interface/port_channel/logical_interface/port_channel/pc_cmd_container_dummy/service_instance_vlan_cmds_dummy_container/get_untagged_vlan_dummy/__init__.py#L92-L113
def _set_untagged(self, v, load=False): """ Setter method for untagged, mapped from YANG variable /interface/port_channel/logical_interface/port_channel/pc_cmd_container_dummy/service_instance_vlan_cmds_dummy_container/get_untagged_vlan_dummy/untagged (container) If this variable is read-only (config: false...
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Setter method for untagged, mapped from YANG variable /interface/port_channel/logical_interface/port_channel/pc_cmd_container_dummy/service_instance_vlan_cmds_dummy_container/get_untagged_vlan_dummy/untagged (container) If this variable is read-only (config: false) in the source YANG file, then _set_untagged is...
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python
train
annoviko/pyclustering
pyclustering/core/som_wrapper.py
https://github.com/annoviko/pyclustering/blob/98aa0dd89fd36f701668fb1eb29c8fb5662bf7d0/pyclustering/core/som_wrapper.py#L73-L95
def som_load(som_pointer, weights, award, capture_objects): """! @brief Load dump of the network to SOM. @details Initialize SOM using existed weights, amount of captured objects by each neuron, captured objects by each neuron. Initialization is not performed if weights are empty. @...
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python
valid
tcalmant/ipopo
pelix/internals/registry.py
https://github.com/tcalmant/ipopo/blob/2f9ae0c44cd9c34ef1a9d50837b3254e75678eb1/pelix/internals/registry.py#L1090-L1115
def __sort_registry(self, svc_ref): # type: (ServiceReference) -> None """ Sorts the registry, after the update of the sort key of given service reference :param svc_ref: A service reference with a modified sort key """ with self.__svc_lock: if svc_re...
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python
train
daviddrysdale/python-phonenumbers
python/phonenumbers/carrier.py
https://github.com/daviddrysdale/python-phonenumbers/blob/9cc5bb4ab5e661e70789b4c64bf7a9383c7bdc20/python/phonenumbers/carrier.py#L53-L79
def name_for_valid_number(numobj, lang, script=None, region=None): """Returns a carrier name for the given PhoneNumber object, in the language provided. The carrier name is the one the number was originally allocated to, however if the country supports mobile number portability the number might not...
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Returns a carrier name for the given PhoneNumber object, in the language provided. The carrier name is the one the number was originally allocated to, however if the country supports mobile number portability the number might not belong to the returned carrier anymore. If no mapping is found an emp...
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python
train
mamrhein/identifiers
identifiers/banking.py
https://github.com/mamrhein/identifiers/blob/93ab2609e461faff245d1f582411bf831b428eef/identifiers/banking.py#L74-L78
def elements(self): """Return the BIC's Party Prefix, Country Code, Party Suffix and Branch Code as a tuple.""" return (self.party_prefix, self.country_code, self.party_suffix, self.branch_code)
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Return the BIC's Party Prefix, Country Code, Party Suffix and Branch Code as a tuple.
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python
train
last-partizan/pytils
pytils/translit.py
https://github.com/last-partizan/pytils/blob/1c570a32b15e564bc68587b8207e32d464e61d08/pytils/translit.py#L190-L217
def slugify(in_string): """ Prepare string for slug (i.e. URL or file/dir name) @param in_string: input string @type in_string: C{basestring} @return: slug-string @rtype: C{str} @raise ValueError: if in_string is C{str}, but it isn't ascii """ try: u_in_string = six.text_t...
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Prepare string for slug (i.e. URL or file/dir name) @param in_string: input string @type in_string: C{basestring} @return: slug-string @rtype: C{str} @raise ValueError: if in_string is C{str}, but it isn't ascii
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python
train
mbj4668/pyang
pyang/plugins/sample-xml-skeleton.py
https://github.com/mbj4668/pyang/blob/f2a5cc3142162e5b9ee4e18d154568d939ff63dd/pyang/plugins/sample-xml-skeleton.py#L199-L220
def sample_element(self, node, parent, module, path): """Create element under `parent`. Declare new namespace if necessary. """ if path is None: return parent, module, None elif path == []: # GO ON pass else: if node.arg ==...
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Create element under `parent`. Declare new namespace if necessary.
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python
train
3DLIRIOUS/MeshLabXML
meshlabxml/transform.py
https://github.com/3DLIRIOUS/MeshLabXML/blob/177cce21e92baca500f56a932d66bd9a33257af8/meshlabxml/transform.py#L198-L220
def rotate(script, axis='z', angle=0.0): """An alternative rotate implementation that uses a geometric function. This is more accurate than the built-in version.""" angle = math.radians(angle) if axis.lower() == 'x': vert_function(script, x_func='x', y_func='y*c...
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An alternative rotate implementation that uses a geometric function. This is more accurate than the built-in version.
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python
test
daknuett/py_register_machine2
engine_tools/output/gpu_alike/rendering.py
https://github.com/daknuett/py_register_machine2/blob/599c53cd7576297d0d7a53344ed5d9aa98acc751/engine_tools/output/gpu_alike/rendering.py#L65-L71
def interrupt(self): """ Invoked on a write operation into the IR of the RendererDevice. """ if(self.device.read(9) & 0x01): self.handle_request() self.device.clear_IR()
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Invoked on a write operation into the IR of the RendererDevice.
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python
train
glitchassassin/lackey
lackey/RegionMatching.py
https://github.com/glitchassassin/lackey/blob/7adadfacd7f45d81186710be992f5668b15399fe/lackey/RegionMatching.py#L1112-L1132
def getCol(self, column, numberColumns=None): """ Returns the specified column of the region (if the raster is set) If numberColumns is provided, uses that instead of the raster """ column = int(column) if self._raster[0] == 0 or self._raster[1] == 0: return self ...
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Returns the specified column of the region (if the raster is set) If numberColumns is provided, uses that instead of the raster
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python
train
atlassian-api/atlassian-python-api
atlassian/confluence.py
https://github.com/atlassian-api/atlassian-python-api/blob/540d269905c3e7547b666fe30c647b2d512cf358/atlassian/confluence.py#L374-L384
def set_page_label(self, page_id, label): """ Set a label on the page :param page_id: content_id format :param label: label to add :return: """ url = 'rest/api/content/{page_id}/label'.format(page_id=page_id) data = {'prefix': 'global', 'na...
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Set a label on the page :param page_id: content_id format :param label: label to add :return:
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python
train
RRZE-HPC/kerncraft
kerncraft/kerncraft.py
https://github.com/RRZE-HPC/kerncraft/blob/c60baf8043e4da8d8d66da7575021c2f4c6c78af/kerncraft/kerncraft.py#L189-L202
def check_arguments(args, parser): """Check arguments passed by user that are not checked by argparse itself.""" if args.asm_block not in ['auto', 'manual']: try: args.asm_block = int(args.asm_block) except ValueError: parser.error('--asm-block can only be "auto", "manual...
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Check arguments passed by user that are not checked by argparse itself.
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python
test
Josef-Friedrich/phrydy
phrydy/mediafile.py
https://github.com/Josef-Friedrich/phrydy/blob/aa13755155977b4776e49f79984f9968ac1d74dc/phrydy/mediafile.py#L947-L966
def serialize(self, image): """Return an APIC frame populated with data from ``image``. """ assert isinstance(image, Image) frame = mutagen.id3.Frames[self.key]() frame.data = image.data frame.mime = image.mime_type frame.desc = image.desc or u'' # For co...
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Return an APIC frame populated with data from ``image``.
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python
train
yunpian/yunpian-python-sdk
yunpian_python_sdk/model/result.py
https://github.com/yunpian/yunpian-python-sdk/blob/405a1196ec83fdf29ff454f74ef036974be11970/yunpian_python_sdk/model/result.py#L53-L58
def detail(self, detail=None, ret_r=False): '''code's detail''' if detail or ret_r: self._detail = detail return self return self._detail
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code's detail
[ "code", "s", "detail" ]
python
train
python/core-workflow
cherry_picker/cherry_picker/cherry_picker.py
https://github.com/python/core-workflow/blob/b93c76195f6db382cfcefee334380fb4c68d4e21/cherry_picker/cherry_picker/cherry_picker.py#L656-L668
def validate_sha(sha): """ Validate that a hexdigest sha is a valid commit in the repo raises ValueError if the sha does not reference a commit within the repo """ cmd = ["git", "log", "-r", sha] try: subprocess.check_output(cmd, stderr=subprocess.STDOUT) except subprocess.Subproces...
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Validate that a hexdigest sha is a valid commit in the repo raises ValueError if the sha does not reference a commit within the repo
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python
train
dixudx/rtcclient
rtcclient/client.py
https://github.com/dixudx/rtcclient/blob/1721dd0b047478f5bdd6359b07a2c503cfafd86f/rtcclient/client.py#L1143-L1151
def _checkMissingParamsFromWorkitem(self, copied_from, keep=False, **kwargs): """Check the missing parameters for rendering directly from the copied workitem """ parameters = self.listFieldsFromWorkitem(copied_from, ...
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Check the missing parameters for rendering directly from the copied workitem
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python
train
ANTsX/ANTsPy
ants/utils/quantile.py
https://github.com/ANTsX/ANTsPy/blob/638020af2cdfc5ff4bdb9809ffe67aa505727a3b/ants/utils/quantile.py#L227-L292
def bandpass_filter_matrix( matrix, tr=1, lowf=0.01, highf=0.1, order = 3): """ Bandpass filter the input time series image ANTsR function: `frequencyFilterfMRI` Arguments --------- image: input time series image tr: sampling time interval (inverse of sampling rate) lowf: lo...
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Bandpass filter the input time series image ANTsR function: `frequencyFilterfMRI` Arguments --------- image: input time series image tr: sampling time interval (inverse of sampling rate) lowf: low frequency cutoff highf: high frequency cutoff order: order of the butterworth fi...
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python
train
DataONEorg/d1_python
gmn/src/d1_gmn/app/views/util.py
https://github.com/DataONEorg/d1_python/blob/3ac4d4f3ca052d3e8641a6a329cab526c8ddcb0d/gmn/src/d1_gmn/app/views/util.py#L179-L196
def parse_and_normalize_url_date(date_str): """Parse a ISO 8601 date-time with optional timezone. - Return as datetime with timezone adjusted to UTC. - Return naive date-time set to UTC. """ if date_str is None: return None try: return d1_common.date_time.dt_from_iso8601_str(da...
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Parse a ISO 8601 date-time with optional timezone. - Return as datetime with timezone adjusted to UTC. - Return naive date-time set to UTC.
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python
train
tensorflow/cleverhans
cleverhans/experimental/certification/nn.py
https://github.com/tensorflow/cleverhans/blob/97488e215760547b81afc53f5e5de8ba7da5bd98/cleverhans/experimental/certification/nn.py#L161-L226
def load_network_from_checkpoint(checkpoint, model_json, input_shape=None): """Function to read the weights from checkpoint based on json description. Args: checkpoint: tensorflow checkpoint with trained model to verify model_json: path of json file with model description of the netwo...
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Function to read the weights from checkpoint based on json description. Args: checkpoint: tensorflow checkpoint with trained model to verify model_json: path of json file with model description of the network list of dictionary items for each layer containing 'type', 'weight_var...
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python
train
kevinconway/venvctrl
venvctrl/venv/command.py
https://github.com/kevinconway/venvctrl/blob/36d4e0e4d5ebced6385a6ade1198f4769ff2df41/venvctrl/venv/command.py#L73-L77
def python(self, cmd): """Execute a python script using the virtual environment python.""" python_bin = self.cmd_path('python') cmd = '{0} {1}'.format(python_bin, cmd) return self._execute(cmd)
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Execute a python script using the virtual environment python.
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python
train
joferkington/mpldatacursor
mpldatacursor/pick_info.py
https://github.com/joferkington/mpldatacursor/blob/7dabc589ed02c35ac5d89de5931f91e0323aa795/mpldatacursor/pick_info.py#L61-L83
def image_props(event): """ Get information for a pick event on an ``AxesImage`` artist. Returns a dict of "i" & "j" index values of the image for the point clicked, and "z": the (uninterpolated) value of the image at i,j. Parameters ----------- event : PickEvent The pick event to p...
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Get information for a pick event on an ``AxesImage`` artist. Returns a dict of "i" & "j" index values of the image for the point clicked, and "z": the (uninterpolated) value of the image at i,j. Parameters ----------- event : PickEvent The pick event to process Returns -------- ...
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python
train
gunthercox/mathparse
mathparse/mathwords.py
https://github.com/gunthercox/mathparse/blob/8aadd40e7238febbfea19b29023583720e374ac0/mathparse/mathwords.py#L411-L423
def words_for_language(language_code): """ Return the math words for a language code. The language_code should be an ISO 639-2 language code. https://www.loc.gov/standards/iso639-2/php/code_list.php """ word_groups = word_groups_for_language(language_code) words = [] for group in word_g...
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Return the math words for a language code. The language_code should be an ISO 639-2 language code. https://www.loc.gov/standards/iso639-2/php/code_list.php
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python
train
openstack/pyghmi
pyghmi/ipmi/console.py
https://github.com/openstack/pyghmi/blob/f710b1d30a8eed19a9e86f01f9351c737666f3e5/pyghmi/ipmi/console.py#L192-L197
def _got_cons_input(self, handle): """Callback for handle events detected by ipmi session """ self._addpendingdata(handle.read()) if not self.awaitingack: self._sendpendingoutput()
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Callback for handle events detected by ipmi session
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python
train
SpriteLink/NIPAP
nipap/nipap/backend.py
https://github.com/SpriteLink/NIPAP/blob/f96069f11ab952d80b13cab06e0528f2d24b3de9/nipap/nipap/backend.py#L1130-L1139
def _db_upgrade(self, db_name): """ Upgrade nipap database schema """ current_db_version = self._get_db_version() self._execute(db_schema.functions) for i in range(current_db_version, nipap.__db_version__): self._logger.info("Upgrading DB schema:", i, "to", i+1) ...
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Upgrade nipap database schema
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python
train
msmbuilder/msmbuilder
msmbuilder/utils/param_sweep.py
https://github.com/msmbuilder/msmbuilder/blob/556a93a170782f47be53f4a1e9d740fb1c8272b3/msmbuilder/utils/param_sweep.py#L13-L51
def param_sweep(model, sequences, param_grid, n_jobs=1, verbose=0): """Fit a series of models over a range of parameters. Parameters ---------- model : msmbuilder.BaseEstimator An *instance* of an estimator to be used to fit data. sequences : list of array-like List of seque...
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Fit a series of models over a range of parameters. Parameters ---------- model : msmbuilder.BaseEstimator An *instance* of an estimator to be used to fit data. sequences : list of array-like List of sequences, or a single sequence. Each sequence should be a 1D iterable o...
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python
train
openstack/horizon
horizon/utils/units.py
https://github.com/openstack/horizon/blob/5601ea9477323e599d9b766fcac1f8be742935b2/horizon/utils/units.py#L40-L53
def is_larger(unit_1, unit_2): """Returns a boolean indicating whether unit_1 is larger than unit_2. E.g: >>> is_larger('KB', 'B') True >>> is_larger('min', 'day') False """ unit_1 = functions.value_for_key(INFORMATION_UNITS, unit_1) unit_2 = functions.value_for_key(INFORMATION_UNI...
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Returns a boolean indicating whether unit_1 is larger than unit_2. E.g: >>> is_larger('KB', 'B') True >>> is_larger('min', 'day') False
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python
train
cggh/scikit-allel
allel/compat.py
https://github.com/cggh/scikit-allel/blob/3c979a57a100240ba959dd13f98839349530f215/allel/compat.py#L51-L66
def memoryview_safe(x): """Make array safe to run in a Cython memoryview-based kernel. These kernels typically break down with the error ``ValueError: buffer source array is read-only`` when running in dask distributed. See Also -------- https://github.com/dask/distributed/issues/1978 https...
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Make array safe to run in a Cython memoryview-based kernel. These kernels typically break down with the error ``ValueError: buffer source array is read-only`` when running in dask distributed. See Also -------- https://github.com/dask/distributed/issues/1978 https://github.com/cggh/scikit-allel...
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python
train
CitrineInformatics/pypif-sdk
pypif_sdk/interop/mdf.py
https://github.com/CitrineInformatics/pypif-sdk/blob/8b01d10d9a1426d5eef12e4b2f31c4657aa0fe59/pypif_sdk/interop/mdf.py#L11-L56
def query_to_mdf_records(query=None, dataset_id=None, mdf_acl=None): """Evaluate a query and return a list of MDF records If a datasetID is specified by there is no query, a simple whole dataset query is formed for the user """ if not query and not dataset_id: raise ValueError("Either query...
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Evaluate a query and return a list of MDF records If a datasetID is specified by there is no query, a simple whole dataset query is formed for the user
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python
train
brocade/pynos
pynos/versions/ver_6/ver_6_0_1/yang/brocade_preprovision.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/brocade_preprovision.py#L26-L38
def preprovision_rbridge_id_wwn(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") preprovision = ET.SubElement(config, "preprovision", xmlns="urn:brocade.com:mgmt:brocade-preprovision") rbridge_id = ET.SubElement(preprovision, "rbridge-id") rbridge...
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Auto Generated Code
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python
train
odlgroup/odl
odl/solvers/functional/functional.py
https://github.com/odlgroup/odl/blob/b8443f6aca90e191ba36c91d32253c5a36249a6c/odl/solvers/functional/functional.py#L1070-L1104
def convex_conj(self): r"""Convex conjugate functional of the functional. Notes ----- Given a functional :math:`f`, the convex conjugate of a linearly perturbed version :math:`f(x) + <y, x>` is given by a translation of the convex conjugate of :math:`f`: .. math...
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r"""Convex conjugate functional of the functional. Notes ----- Given a functional :math:`f`, the convex conjugate of a linearly perturbed version :math:`f(x) + <y, x>` is given by a translation of the convex conjugate of :math:`f`: .. math:: (f + \langle y, ...
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python
train
titusjan/argos
argos/repo/registry.py
https://github.com/titusjan/argos/blob/20d0a3cae26c36ea789a5d219c02ca7df21279dd/argos/repo/registry.py#L129-L136
def getFileDialogFilter(self): """ Returns a filter that can be used in open file dialogs, for example: 'All files (*);;Txt (*.txt;*.text);;netCDF(*.nc;*.nc4)' """ filters = [] for regRti in self.items: filters.append(regRti.getFileDialogFilter()) return '...
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Returns a filter that can be used in open file dialogs, for example: 'All files (*);;Txt (*.txt;*.text);;netCDF(*.nc;*.nc4)'
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python
train
pymc-devs/pymc
pymc/StepMethods.py
https://github.com/pymc-devs/pymc/blob/c6e530210bff4c0d7189b35b2c971bc53f93f7cd/pymc/StepMethods.py#L97-L130
def assign_method(stochastic, scale=None, verbose=-1): """ Returns a step method instance to handle a variable. If several methods have the same competence, it picks one arbitrarily (using set.pop()). """ # Retrieve set of best candidates best_candidates = pick_best_methods(stochastic) ...
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Returns a step method instance to handle a variable. If several methods have the same competence, it picks one arbitrarily (using set.pop()).
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python
train
MultipedRobotics/pyxl320
pyxl320/utils.py
https://github.com/MultipedRobotics/pyxl320/blob/1a56540e208b028ee47d5fa0a7c7babcee0d9214/pyxl320/utils.py#L22-L38
def listSerialPorts(): """ http://pyserial.readthedocs.io/en/latest/shortintro.html This calls the command line tool from pyserial to list the available serial ports. """ cmd = 'python -m serial.tools.list_ports' err, ret = commands.getstatusoutput(cmd) if not err: r = ret.split('\n') ret = [] for line i...
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http://pyserial.readthedocs.io/en/latest/shortintro.html This calls the command line tool from pyserial to list the available serial ports.
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python
train
django-crispy-forms/django-crispy-forms
crispy_forms/layout_slice.py
https://github.com/django-crispy-forms/django-crispy-forms/blob/cd476927a756133c667c199bb12120f877bf6b7e/crispy_forms/layout_slice.py#L118-L144
def map(self, function): """ Iterates over layout objects pointed in `self.slice` executing `function` on them It passes `function` last layout object """ if isinstance(self.slice, slice): for i in range(*self.slice.indices(len(self.layout.fields))): f...
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Iterates over layout objects pointed in `self.slice` executing `function` on them It passes `function` last layout object
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python
train
coleifer/walrus
walrus/containers.py
https://github.com/coleifer/walrus/blob/82bf15a6613487b5b5fefeb488f186d7e0106547/walrus/containers.py#L477-L489
def interstore(self, dest, *others): """ Store the intersection of the current set and one or more others in a new key. :param dest: the name of the key to store intersection :param others: One or more :py:class:`Set` instances :returns: A :py:class:`Set` referencing ``d...
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Store the intersection of the current set and one or more others in a new key. :param dest: the name of the key to store intersection :param others: One or more :py:class:`Set` instances :returns: A :py:class:`Set` referencing ``dest``.
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python
train
Julian/jsonschema
jsonschema/validators.py
https://github.com/Julian/jsonschema/blob/a72332004cdc3ba456de7918bc32059822b2f69a/jsonschema/validators.py#L712-L730
def resolving(self, ref): """ Resolve the given ``ref`` and enter its resolution scope. Exits the scope on exit of this context manager. Arguments: ref (str): The reference to resolve """ url, resolved = self.resolve(ref) self.push...
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Resolve the given ``ref`` and enter its resolution scope. Exits the scope on exit of this context manager. Arguments: ref (str): The reference to resolve
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python
train
ChrisCummins/labm8
__init__.py
https://github.com/ChrisCummins/labm8/blob/dd10d67a757aefb180cb508f86696f99440c94f5/__init__.py#L26-L34
def exit(status=0): """ Terminate the program with the given status code. """ if status == 0: lab.io.printf(lab.io.Colours.GREEN, "Done.") else: lab.io.printf(lab.io.Colours.RED, "Error {0}".format(status)) sys.exit(status)
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Terminate the program with the given status code.
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python
train
ModisWorks/modis
modis/discord_modis/modules/music/_musicplayer.py
https://github.com/ModisWorks/modis/blob/1f1225c9841835ec1d1831fc196306527567db8b/modis/discord_modis/modules/music/_musicplayer.py#L1149-L1160
async def setup_streamer(self): """Sets up basic defaults for the streamer""" self.streamer.volume = self.volume / 100 self.streamer.start() self.pause_time = None self.vclient_starttime = self.vclient.loop.time() # Cache next song self.logger.debug("Caching nex...
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Sets up basic defaults for the streamer
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python
train
mobinrg/rpi_spark_drives
JMRPiSpark/Drives/Display/SSD1306.py
https://github.com/mobinrg/rpi_spark_drives/blob/e1602d8268a5ef48e9e0a8b37de89e0233f946ea/JMRPiSpark/Drives/Display/SSD1306.py#L225-L241
def clear(self, fill = 0x00): """! \~english Clear buffer data and fill color into buffer @param fill: a color value, it will fill into buffer.<br> The SSD1306 only chosen two colors: <br> 0 (0x0): black <br> 1 (0x1): white <br> ...
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! \~english Clear buffer data and fill color into buffer @param fill: a color value, it will fill into buffer.<br> The SSD1306 only chosen two colors: <br> 0 (0x0): black <br> 1 (0x1): white <br> \~chinese 清除缓冲区数据并在缓冲区中填充颜色 ...
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python
train
trailofbits/manticore
manticore/native/cpu/bitwise.py
https://github.com/trailofbits/manticore/blob/54c5a15b1119c523ae54c09972413e8b97f11629/manticore/native/cpu/bitwise.py#L29-L46
def GetNBits(value, nbits): """ Get the first `nbits` from `value`. :param value: Source value from which to extract :type value: int or long or BitVec :param int nbits: How many bits to extract :return: Low `nbits` bits of `value`. :rtype int or long or BitVec """ # NOP if sizes ar...
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Get the first `nbits` from `value`. :param value: Source value from which to extract :type value: int or long or BitVec :param int nbits: How many bits to extract :return: Low `nbits` bits of `value`. :rtype int or long or BitVec
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python
valid
iotile/coretools
iotilegateway/iotilegateway/device.py
https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotilegateway/iotilegateway/device.py#L214-L243
async def connect(self, conn_id, connection_string): """Connect to a device. See :meth:`AbstractDeviceAdapter.connect`. """ if connection_string.startswith('device/'): adapter_id, local_conn = self._find_best_adapter(connection_string, conn_id) translate_conn = ...
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Connect to a device. See :meth:`AbstractDeviceAdapter.connect`.
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python
train
bitesofcode/projexui
projexui/widgets/xnodewidget/xnodewidget.py
https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/widgets/xnodewidget/xnodewidget.py#L129-L143
def centerOnItems(self, items = None): """ Centers on the given items, if no items are supplied, then all items will be centered on. :param items | [<QGraphicsItem>, ..] """ if not items: rect = self.scene().visibleItemsBoundingRect() ...
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Centers on the given items, if no items are supplied, then all items will be centered on. :param items | [<QGraphicsItem>, ..]
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python
train
blackecho/Deep-Learning-TensorFlow
yadlt/core/supervised_model.py
https://github.com/blackecho/Deep-Learning-TensorFlow/blob/ddeb1f2848da7b7bee166ad2152b4afc46bb2086/yadlt/core/supervised_model.py#L29-L72
def fit(self, train_X, train_Y, val_X=None, val_Y=None, graph=None): """Fit the model to the data. Parameters ---------- train_X : array_like, shape (n_samples, n_features) Training data. train_Y : array_like, shape (n_samples, n_classes) Training label...
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Fit the model to the data. Parameters ---------- train_X : array_like, shape (n_samples, n_features) Training data. train_Y : array_like, shape (n_samples, n_classes) Training labels. val_X : array_like, shape (N, n_features) optional, (default = None)...
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python
train
acorg/dark-matter
dark/local_align.py
https://github.com/acorg/dark-matter/blob/c78a1bf262667fa5db3548fa7066c4ec14d0551d/dark/local_align.py#L201-L242
def _cigarString(self, output): """ Return a cigar string of aligned sequences. @param output: a C{tup} of strings (align1, align, align2) @return: a C{str} containing the cigar string. Eg with input: 'GGCCCGCA' and 'GG-CTGCA', return 2=1D1=1X3= """ cigar = [...
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Return a cigar string of aligned sequences. @param output: a C{tup} of strings (align1, align, align2) @return: a C{str} containing the cigar string. Eg with input: 'GGCCCGCA' and 'GG-CTGCA', return 2=1D1=1X3=
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python
train
avirshup/DockerMake
dockermake/step.py
https://github.com/avirshup/DockerMake/blob/2173199904f086353ef539ea578788b99f6fea0a/dockermake/step.py#L85-L181
def build(self, client, pull=False, usecache=True): """ Drives an individual build step. Build steps are separated by build_directory. If a build has zero one or less build_directories, it will be built in a single step. Args: client (docker.Client): docker client ob...
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Drives an individual build step. Build steps are separated by build_directory. If a build has zero one or less build_directories, it will be built in a single step. Args: client (docker.Client): docker client object that will build the image pull (bool): whether to pull ...
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python
train
Hypex/hyppy
hyppy/func.py
https://github.com/Hypex/hyppy/blob/a425619c2a102b0e598fd6cac8aa0f6b766f542d/hyppy/func.py#L19-L40
def fleet_ttb(unit_type, quantity, factories, is_techno=False, is_dict=False, stasis_enabled=False): """ Calculate the time taken to construct a given fleet """ unit_weights = { UNIT_SCOUT: 1, UNIT_DESTROYER: 13, UNIT_BOMBER: 10, UNIT_CRUISER: 85, UNIT_STARBASE:...
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Calculate the time taken to construct a given fleet
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python
train
binux/pyspider
pyspider/fetcher/tornado_fetcher.py
https://github.com/binux/pyspider/blob/3fccfabe2b057b7a56d4a4c79dc0dd6cd2239fe9/pyspider/fetcher/tornado_fetcher.py#L780-L787
def quit(self): '''Quit fetcher''' self._running = False self._quit = True self.ioloop.add_callback(self.ioloop.stop) if hasattr(self, 'xmlrpc_server'): self.xmlrpc_ioloop.add_callback(self.xmlrpc_server.stop) self.xmlrpc_ioloop.add_callback(self.xmlrpc_io...
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Quit fetcher
[ "Quit", "fetcher" ]
python
train
astroML/gatspy
gatspy/datasets/rrlyrae.py
https://github.com/astroML/gatspy/blob/a8f94082a3f27dfe9cb58165707b883bf28d9223/gatspy/datasets/rrlyrae.py#L175-L184
def get_metadata(self, lcid): """Get the parameters derived from the fit for the given id. This is table 2 of Sesar 2010 """ if self._metadata is None: self._metadata = fetch_rrlyrae_lc_params() i = np.where(self._metadata['id'] == lcid)[0] if len(i) == 0: ...
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Get the parameters derived from the fit for the given id. This is table 2 of Sesar 2010
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python
train
apache/spark
python/pyspark/mllib/clustering.py
https://github.com/apache/spark/blob/618d6bff71073c8c93501ab7392c3cc579730f0b/python/pyspark/mllib/clustering.py#L856-L865
def setRandomCenters(self, dim, weight, seed): """ Set the initial centres to be random samples from a gaussian population with constant weights. """ rng = random.RandomState(seed) clusterCenters = rng.randn(self._k, dim) clusterWeights = tile(weight, self._k) ...
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Set the initial centres to be random samples from a gaussian population with constant weights.
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python
train
pbrisk/timewave
timewave/engine.py
https://github.com/pbrisk/timewave/blob/cf641391d1607a424042724c8b990d43ee270ef6/timewave/engine.py#L280-L288
def finalize(self): """ finalize simulation for consumer """ # todo sort self.result by path_num if self.result: self.result = sorted(self.result, key=lambda x: x[0]) p, r = map(list, zip(*self.result)) self.result = r
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finalize simulation for consumer
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python
train
PyCQA/pylint
pylint/utils/ast_walker.py
https://github.com/PyCQA/pylint/blob/2bf5c61a3ff6ae90613b81679de42c0f19aea600/pylint/utils/ast_walker.py#L58-L80
def walk(self, astroid): """call visit events of astroid checkers for the given node, recurse on its children, then leave events. """ cid = astroid.__class__.__name__.lower() # Detect if the node is a new name for a deprecated alias. # In this case, favour the methods fo...
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call visit events of astroid checkers for the given node, recurse on its children, then leave events.
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python
test
rh-marketingops/dwm
dwm/dwmmain.py
https://github.com/rh-marketingops/dwm/blob/66c7d18db857afbe5d574478ceaaad6159ae7469/dwm/dwmmain.py#L291-L425
def _derive(self, record, hist=None): """ Derivation filters like 'deriveValue' to replace given input values from one or more fields. In case 'copyValue' copy value to the target field from given an input value from one field. 'deriveRegex' replace given an input value from one ...
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python
train
horazont/aioxmpp
aioxmpp/pep/service.py
https://github.com/horazont/aioxmpp/blob/22a68e5e1d23f2a4dee470092adbd4672f9ef061/aioxmpp/pep/service.py#L193-L249
def publish(self, node, data, *, id_=None, access_model=None): """ Publish an item `data` in the PubSub node `node` on the PEP service associated with the user's JID. :param node: The PubSub node to publish to. :param data: The item to publish. :type data: An XSO represe...
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Publish an item `data` in the PubSub node `node` on the PEP service associated with the user's JID. :param node: The PubSub node to publish to. :param data: The item to publish. :type data: An XSO representing the paylaod. :param id_: The id the published item shall have. ...
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python
train
StanfordVL/robosuite
robosuite/wrappers/ik_wrapper.py
https://github.com/StanfordVL/robosuite/blob/65cd16810e2ed647e3ec88746af3412065b7f278/robosuite/wrappers/ik_wrapper.py#L53-L59
def set_robot_joint_positions(self, positions): """ Overrides the function to set the joint positions directly, since we need to notify the IK controller of the change. """ self.env.set_robot_joint_positions(positions) self.controller.sync_state()
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Overrides the function to set the joint positions directly, since we need to notify the IK controller of the change.
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python
train
log2timeline/dfvfs
dfvfs/resolver/cache.py
https://github.com/log2timeline/dfvfs/blob/2b3ccd115f9901d89f383397d4a1376a873c83c4/dfvfs/resolver/cache.py#L195-L210
def RemoveObject(self, identifier): """Removes a cached object based on the identifier. This method ignores the cache value reference count. Args: identifier (str): VFS object identifier. Raises: KeyError: if the VFS object is not found in the cache. """ if identifier not in self....
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Removes a cached object based on the identifier. This method ignores the cache value reference count. Args: identifier (str): VFS object identifier. Raises: KeyError: if the VFS object is not found in the cache.
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python
train
ucfopen/canvasapi
canvasapi/canvas.py
https://github.com/ucfopen/canvasapi/blob/319064b5fc97ba54250af683eb98723ef3f76cf8/canvasapi/canvas.py#L450-L468
def get_group_category(self, category): """ Get a single group category. :calls: `GET /api/v1/group_categories/:group_category_id \ <https://canvas.instructure.com/doc/api/group_categories.html#method.group_categories.show>`_ :param category: The object or ID of the category. ...
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Get a single group category. :calls: `GET /api/v1/group_categories/:group_category_id \ <https://canvas.instructure.com/doc/api/group_categories.html#method.group_categories.show>`_ :param category: The object or ID of the category. :type category: :class:`canvasapi.group.GroupCategory...
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python
train
secdev/scapy
scapy/layers/dns.py
https://github.com/secdev/scapy/blob/3ffe757c184017dd46464593a8f80f85abc1e79a/scapy/layers/dns.py#L550-L599
def RRlist2bitmap(lst): """ Encode a list of integers representing Resource Records to a bitmap field used in the NSEC Resource Record. """ # RFC 4034, 4.1.2. The Type Bit Maps Field import math bitmap = b"" lst = [abs(x) for x in sorted(set(lst)) if x <= 65535] # number of window...
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Encode a list of integers representing Resource Records to a bitmap field used in the NSEC Resource Record.
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python
train
onnx/onnx
onnx/external_data_helper.py
https://github.com/onnx/onnx/blob/2f7dc10f03a072526d94b6820cedbf2a1ec5a2c4/onnx/external_data_helper.py#L174-L181
def _get_attribute_tensors(onnx_model_proto): # type: (ModelProto) -> Iterable[TensorProto] """Create an iterator of tensors from node attributes of an ONNX model.""" for node in onnx_model_proto.graph.node: for attribute in node.attribute: if attribute.HasField("t"): yield ...
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Create an iterator of tensors from node attributes of an ONNX model.
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python
train
toomore/grs
grs/twseno.py
https://github.com/toomore/grs/blob/a1285cb57878284a886952968be9e31fbfa595dd/grs/twseno.py#L55-L64
def __industry_code(self): ''' import industry_code ''' csv_path = os.path.join(os.path.dirname(__file__), self.industry_code_files) with open(csv_path) as csv_file: csv_data = csv.reader(csv_file) result = {} for i in csv_data: ...
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import industry_code
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python
train
bitesofcode/projexui
projexui/widgets/xorbtreewidget/xorbtreewidget.py
https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/widgets/xorbtreewidget/xorbtreewidget.py#L2179-L2210
def setTableType(self, tableType): """ Defines the table class type that this tree will be displaying. :param table | <subclass of orb.Table> """ if tableType == self._tableType: return # clear all the information block...
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Defines the table class type that this tree will be displaying. :param table | <subclass of orb.Table>
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python
train
apple/turicreate
src/unity/python/turicreate/util/_cloudpickle.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/src/unity/python/turicreate/util/_cloudpickle.py#L1134-L1141
def _rehydrate_skeleton_class(skeleton_class, class_dict): """Put attributes from `class_dict` back on `skeleton_class`. See CloudPickler.save_dynamic_class for more info. """ for attrname, attr in class_dict.items(): setattr(skeleton_class, attrname, attr) return skeleton_class
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Put attributes from `class_dict` back on `skeleton_class`. See CloudPickler.save_dynamic_class for more info.
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python
train
Crunch-io/crunch-cube
src/cr/cube/crunch_cube.py
https://github.com/Crunch-io/crunch-cube/blob/a837840755690eb14b2ec8e8d93b4104e01c854f/src/cr/cube/crunch_cube.py#L525-L613
def proportions( self, axis=None, weighted=True, include_transforms_for_dims=None, include_mr_cat=False, prune=False, ): """Return percentage values for cube as `numpy.ndarray`. This function calculates the proportions across the selected axis ...
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Return percentage values for cube as `numpy.ndarray`. This function calculates the proportions across the selected axis of a crunch cube. For most variable types, it means the value divided by the margin value. For a multiple-response variable, the value is divided by the sum of selecte...
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python
train
dwwkelly/note
note/server.py
https://github.com/dwwkelly/note/blob/b41d5fe1e4a3b67b50285168dd58f903bf219e6c/note/server.py#L48-L71
def Handle_Events(self, events): """ Handle events from poll() :events: A list of tuples form zmq.poll() :type events: list :returns: None """ for e in events: sock = e[0] event_type = e[1] if event_type == zmq.POLLIN: ...
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Handle events from poll() :events: A list of tuples form zmq.poll() :type events: list :returns: None
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python
train
bcbio/bcbio-nextgen
bcbio/pipeline/datadict.py
https://github.com/bcbio/bcbio-nextgen/blob/6a9348c0054ccd5baffd22f1bb7d0422f6978b20/bcbio/pipeline/datadict.py#L223-L235
def get_input_sequence_files(data, default=None): """ returns the input sequencing files, these can be single or paired FASTQ files or BAM files """ if "files" not in data or data.get("files") is None: file1, file2 = None, None elif len(data["files"]) == 2: file1, file2 = data["f...
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returns the input sequencing files, these can be single or paired FASTQ files or BAM files
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python
train
asifpy/django-crudbuilder
crudbuilder/views.py
https://github.com/asifpy/django-crudbuilder/blob/9de1c6fa555086673dd7ccc351d4b771c6192489/crudbuilder/views.py#L85-L111
def generate_list_view(self): """Generate class based view for ListView""" name = model_class_form(self.model + 'ListView') list_args = dict( model=self.get_model_class, context_object_name=plural(self.model), template_name=self.get_template('list'), ...
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Generate class based view for ListView
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python
train
cgrok/cr-async
crasync/core.py
https://github.com/cgrok/cr-async/blob/f65a968e54704168706d137d1ba662f55f8ab852/crasync/core.py#L82-L91
async def get_profile(self, *tags): '''Get a profile object using tag(s)''' url = '{0.BASE}/profile/{1}'.format(self, ','.join(tags)) data = await self.request(url) if isinstance(data, list): return [Profile(self, c) for c in data] else: ...
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Get a profile object using tag(s)
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python
train
SMTG-UCL/sumo
sumo/plotting/__init__.py
https://github.com/SMTG-UCL/sumo/blob/47aec6bbfa033a624435a65bd4edabd18bfb437f/sumo/plotting/__init__.py#L145-L157
def power_tick(val, pos, times_sign=r'\times'): """Custom power ticker function. """ if val == 0: return r'$\mathregular{0}$' elif val < 0: exponent = int(np.log10(-val)) else: exponent = int(np.log10(val)) coeff = val / 10**exponent return r'$\mathregular{{{:.1f} {} 10^...
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Custom power ticker function.
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python
train
saltstack/salt
salt/modules/keystone.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/keystone.py#L232-L255
def ec2_credentials_delete(user_id=None, name=None, access_key=None, profile=None, **connection_args): ''' Delete EC2-compatible credentials CLI Examples: .. code-block:: bash salt '*' keystone.ec2_credentials_delete \ 860f8c2c38ca4fab989f9bc56a061a64 access...
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Delete EC2-compatible credentials CLI Examples: .. code-block:: bash salt '*' keystone.ec2_credentials_delete \ 860f8c2c38ca4fab989f9bc56a061a64 access_key=5f66d2f24f604b8bb9cd28886106f442 salt '*' keystone.ec2_credentials_delete name=admin \ access_key=5f66d2f24f604b8bb9cd28...
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python
train
ckan/losser
losser/cli.py
https://github.com/ckan/losser/blob/fd0832d9fa93cabe9ce9a9153dc923f2cf39cb5f/losser/cli.py#L153-L211
def make_parser(add_help=True, exclude_args=None): """Return an argparse.ArgumentParser object with losser's arguments. Other projects can call this to get an ArgumentParser with losser's command line interface to use as a parent parser for their own parser. For example:: parent_parser = losse...
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Return an argparse.ArgumentParser object with losser's arguments. Other projects can call this to get an ArgumentParser with losser's command line interface to use as a parent parser for their own parser. For example:: parent_parser = losser.cli.make_parser( add_help=False, exclude_arg...
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python
train
Gandi/gandi.cli
gandi/cli/commands/disk.py
https://github.com/Gandi/gandi.cli/blob/6ee5b8fc8ec44b0a6c232043ca610606ad8f693d/gandi/cli/commands/disk.py#L355-L402
def migrate(gandi, resource, force, background): """ Migrate a disk to another datacenter. """ # check it's not attached source_info = gandi.disk.info(resource) if source_info['vms_id']: click.echo('Cannot start the migration: disk %s is attached. ' 'Please detach the disk bef...
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Migrate a disk to another datacenter.
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python
train
yyuu/botornado
boto/__init__.py
https://github.com/yyuu/botornado/blob/fffb056f5ff2324d1d5c1304014cfb1d899f602e/boto/__init__.py#L250-L262
def connect_rds(aws_access_key_id=None, aws_secret_access_key=None, **kwargs): """ :type aws_access_key_id: string :param aws_access_key_id: Your AWS Access Key ID :type aws_secret_access_key: string :param aws_secret_access_key: Your AWS Secret Access Key :rtype: :class:`boto.rds.RDSConnectio...
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:type aws_access_key_id: string :param aws_access_key_id: Your AWS Access Key ID :type aws_secret_access_key: string :param aws_secret_access_key: Your AWS Secret Access Key :rtype: :class:`boto.rds.RDSConnection` :return: A connection to RDS
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python
train
klen/aioauth-client
aioauth_client.py
https://github.com/klen/aioauth-client/blob/54f58249496c26965adb4f752f2b24cfe18d0084/aioauth_client.py#L472-L480
def user_parse(data): """Parse information from the provider.""" user_ = data.get('user', {}) yield 'id', data.get('user_nsid') or user_.get('id') yield 'username', user_.get('username', {}).get('_content') first_name, _, last_name = data.get( 'fullname', {}).get('_co...
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Parse information from the provider.
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python
train
cimm-kzn/CGRtools
CGRtools/containers/molecule.py
https://github.com/cimm-kzn/CGRtools/blob/15a19b04f6e4e1d0dab8e0d32a0877c7f7d70f34/CGRtools/containers/molecule.py#L112-L125
def substructure(self, atoms, meta=False, as_view=True): """ create substructure containing atoms from nbunch list :param atoms: list of atoms numbers of substructure :param meta: if True metadata will be copied to substructure :param as_view: If True, the returned graph-view pr...
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create substructure containing atoms from nbunch list :param atoms: list of atoms numbers of substructure :param meta: if True metadata will be copied to substructure :param as_view: If True, the returned graph-view provides a read-only view of the original structure scaffold withou...
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python
train
siznax/wptools
wptools/category.py
https://github.com/siznax/wptools/blob/100eaea585c34aa9ad87a9eda8982bb4898f6ec9/wptools/category.py#L92-L102
def _query(self, action, qobj): """ Form query to enumerate category """ title = self.params.get('title') pageid = self.params.get('pageid') if action == 'random': return qobj.random(namespace=14) elif action == 'category': return qobj.cat...
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Form query to enumerate category
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python
train
apple/turicreate
deps/src/boost_1_68_0/tools/build/src/build/virtual_target.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/deps/src/boost_1_68_0/tools/build/src/build/virtual_target.py#L532-L584
def __adjust_name(self, specified_name): """Given the target name specified in constructor, returns the name which should be really used, by looking at the <tag> properties. The tag properties come in two flavour: - <tag>value, - <tag>@rule-name In the first case, val...
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python
train
learningequality/iceqube
src/iceqube/common/utils.py
https://github.com/learningequality/iceqube/blob/97ac9e0f65bfedb0efa9f94638bcb57c7926dea2/src/iceqube/common/utils.py#L134-L146
def main_loop(self, timeout=None): """ Check if self.trigger_event is set. If it is, then run our function. If not, return early. :param timeout: How long to wait for a trigger event. Defaults to 0. :return: """ if self.trigger_event.wait(timeout): try: ...
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python
train
jhshi/wltrace
wltrace/utils.py
https://github.com/jhshi/wltrace/blob/4c8441162f7cddd47375da2effc52c95b97dc81d/wltrace/utils.py#L23-L43
def calc_padding(fmt, align): """Calculate how many padding bytes needed for ``fmt`` to be aligned to ``align``. Args: fmt (str): :mod:`struct` format. align (int): alignment (2, 4, 8, etc.) Returns: str: padding format (e.g., various number of 'x'). >>> calc_padding('b', ...
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python
train
twilio/twilio-python
twilio/rest/api/v2010/account/usage/record/all_time.py
https://github.com/twilio/twilio-python/blob/c867895f55dcc29f522e6e8b8868d0d18483132f/twilio/rest/api/v2010/account/usage/record/all_time.py#L185-L194
def get_instance(self, payload): """ Build an instance of AllTimeInstance :param dict payload: Payload response from the API :returns: twilio.rest.api.v2010.account.usage.record.all_time.AllTimeInstance :rtype: twilio.rest.api.v2010.account.usage.record.all_time.AllTimeInstance...
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Build an instance of AllTimeInstance :param dict payload: Payload response from the API :returns: twilio.rest.api.v2010.account.usage.record.all_time.AllTimeInstance :rtype: twilio.rest.api.v2010.account.usage.record.all_time.AllTimeInstance
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python
train
brocade/pynos
pynos/versions/base/yang/brocade_sflow.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/base/yang/brocade_sflow.py#L61-L70
def sflow_polling_interval(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") sflow = ET.SubElement(config, "sflow", xmlns="urn:brocade.com:mgmt:brocade-sflow") polling_interval = ET.SubElement(sflow, "polling-interval") polling_interval.text = kwar...
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Auto Generated Code
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python
train
bitesofcode/projexui
projexui/wizards/xscaffoldwizard/xscaffoldwizard.py
https://github.com/bitesofcode/projexui/blob/f18a73bec84df90b034ca69b9deea118dbedfc4d/projexui/wizards/xscaffoldwizard/xscaffoldwizard.py#L166-L203
def validatePage(self): """ Validates the page against the scaffold information, setting the values along the way. """ widgets = self.propertyWidgetMap() failed = '' for prop, widget in widgets.items(): val, success = projexui.widgetValue(widge...
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Validates the page against the scaffold information, setting the values along the way.
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python
train
CalebBell/fluids
fluids/units.py
https://github.com/CalebBell/fluids/blob/57f556752e039f1d3e5a822f408c184783db2828/fluids/units.py#L116-L134
def check_args_order(func): '''Reads a numpydoc function and compares the Parameters and Other Parameters with the input arguments of the actual function signature. Raises an exception if not correctly defined. >>> check_args_order(fluids.core.Reynolds) ''' argspec = inspect.getargspec(func...
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Reads a numpydoc function and compares the Parameters and Other Parameters with the input arguments of the actual function signature. Raises an exception if not correctly defined. >>> check_args_order(fluids.core.Reynolds)
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python
train
brocade/pynos
pynos/versions/ver_6/ver_6_0_1/yang/brocade_ras_ext.py
https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/brocade_ras_ext.py#L66-L79
def show_raslog_output_show_all_raslog_raslog_entries_index(self, **kwargs): """Auto Generated Code """ config = ET.Element("config") show_raslog = ET.Element("show_raslog") config = show_raslog output = ET.SubElement(show_raslog, "output") show_all_raslog = ET.Su...
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Auto Generated Code
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python
train
ansible/tower-cli
tower_cli/resources/workflow.py
https://github.com/ansible/tower-cli/blob/a2b151fed93c47725018d3034848cb3a1814bed7/tower_cli/resources/workflow.py#L266-L306
def schema(self, wfjt, node_network=None): """ Convert YAML/JSON content into workflow node objects if node_network param is given. If not, print a YAML representation of the node network. =====API DOCS===== Convert YAML/JSON content into workflow node objects if ``node_...
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python
valid