kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def create_data_and_metadata(self, data: numpy.ndarray, intensity_calibration: CalibrationModule.Calibration = None, dimensional_calibrations: typing.List[CalibrationModule.Calibration] = None, metadata: dict = None, timestamp: str = None, data_descripto...	[ "def", "create_data_and_metadata", "(", "self", ",", "data", ":", "numpy", ".", "ndarray", ",", "intensity_calibration", ":", "CalibrationModule", ".", "Calibration", "=", "None", ",", "dimensional_calibrations", ":", "typing", ".", "List", "[", "CalibrationModule",...	59.529412	0.008755
def ping(self): """Ping this hook. :returns: bool """ url = self._build_url('pings', base_url=self._api) return self._boolean(self._post(url), 204, 404)	[ "def", "ping", "(", "self", ")", ":", "url", "=", "self", ".", "_build_url", "(", "'pings'", ",", "base_url", "=", "self", ".", "_api", ")", "return", "self", ".", "_boolean", "(", "self", ".", "_post", "(", "url", ")", ",", "204", ",", "404", ")...	26.714286	0.010363
def draw_image_color_segments(source, clusters, hide_axes = True): """! @brief Shows image segments using colored image. @details Each color on result image represents allocated segment. The first image is initial and other is result of segmentation. @param[in] source (string): Path to image. ...	[ "def", "draw_image_color_segments", "(", "source", ",", "clusters", ",", "hide_axes", "=", "True", ")", ":", "image_source", "=", "Image", ".", "open", "(", "source", ")", "image_size", "=", "image_source", ".", "size", "(", "fig", ",", "axarr", ")", "=", ...	44.52	0.021978
def combine_HSPs(a): """ Combine HSPs into a single BlastLine. """ m = a[0] if len(a) == 1: return m for b in a[1:]: assert m.query == b.query assert m.subject == b.subject m.hitlen += b.hitlen m.nmismatch += b.nmismatch m.ngaps += b.ngaps ...	[ "def", "combine_HSPs", "(", "a", ")", ":", "m", "=", "a", "[", "0", "]", "if", "len", "(", "a", ")", "==", "1", ":", "return", "m", "for", "b", "in", "a", "[", "1", ":", "]", ":", "assert", "m", ".", "query", "==", "b", ".", "query", "ass...	25.521739	0.001642
def _process_command(self, command, name=None): """Process ``make_ndx`` command and return name and temp index file.""" self._command_counter += 1 if name is None: name = "CMD{0:03d}".format(self._command_counter) # Need to build it with two make_ndx calls because I cannot...	[ "def", "_process_command", "(", "self", ",", "command", ",", "name", "=", "None", ")", ":", "self", ".", "_command_counter", "+=", "1", "if", "name", "is", "None", ":", "name", "=", "\"CMD{0:03d}\"", ".", "format", "(", "self", ".", "_command_counter", "...	49.2	0.009302
def previous_pages_numbers(self): 'A generator of previous page integers.' count = self._previous_pages_count() + 1 for i in reversed(range(1, count)): yield i	[ "def", "previous_pages_numbers", "(", "self", ")", ":", "count", "=", "self", ".", "_previous_pages_count", "(", ")", "+", "1", "for", "i", "in", "reversed", "(", "range", "(", "1", ",", "count", ")", ")", ":", "yield", "i" ]	38.2	0.010256
async def get_authenticated_user( self, http_client: httpclient.AsyncHTTPClient = None ) -> Dict[str, Any]: """Gets the OAuth authorized user and access token. This method should be called from the handler for your OAuth callback URL to complete the registration process. We run the ...	[ "async", "def", "get_authenticated_user", "(", "self", ",", "http_client", ":", "httpclient", ".", "AsyncHTTPClient", "=", "None", ")", "->", "Dict", "[", "str", ",", "Any", "]", ":", "handler", "=", "cast", "(", "RequestHandler", ",", "self", ")", "reques...	45.244444	0.001442
def dump_directory_structure(out = sys.stdout): """ Dumps a detailed report of the turicreate/sframe directory structure and files, along with the output of os.lstat for each. This is useful for debugging purposes. """ "Dumping Installation Directory Structure for Debugging: " import sys,...	[ "def", "dump_directory_structure", "(", "out", "=", "sys", ".", "stdout", ")", ":", "\"Dumping Installation Directory Structure for Debugging: \"", "import", "sys", ",", "os", "from", "os", ".", "path", "import", "split", ",", "abspath", ",", "join", "from", "iter...	31.081081	0.012648
def pivot_query_as_matrix(facet=None, facet_pivot_fields=None, **kwargs): """ Pivot query """ if facet_pivot_fields is None: facet_pivot_fields = [] logging.info("Additional args: {}".format(kwargs)) fp = search_associations(rows=0, facet_fields=[facet], ...	[ "def", "pivot_query_as_matrix", "(", "facet", "=", "None", ",", "facet_pivot_fields", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "facet_pivot_fields", "is", "None", ":", "facet_pivot_fields", "=", "[", "]", "logging", ".", "info", "(", "\"Addition...	27.326087	0.016897
def _load_config(self, client_secrets_file, client_id, client_secret): """Loads oauth2 configuration in order of priority. Priority: 1. Config passed to the constructor or init_app. 2. Config passed via the GOOGLE_OAUTH2_CLIENT_SECRETS_FILE app config. ...	[ "def", "_load_config", "(", "self", ",", "client_secrets_file", ",", "client_id", ",", "client_secret", ")", ":", "if", "client_id", "and", "client_secret", ":", "self", ".", "client_id", ",", "self", ".", "client_secret", "=", "client_id", ",", "client_secret",...	40.432432	0.001305
def next_frame_base(): """Common HParams for next_frame models.""" hparams = common_hparams.basic_params1() # Loss cutoff. hparams.add_hparam("video_modality_loss_cutoff", 0.01) # Additional resizing the frames before feeding them to model. hparams.add_hparam("preprocess_resize_frames", None) # How many d...	[ "def", "next_frame_base", "(", ")", ":", "hparams", "=", "common_hparams", ".", "basic_params1", "(", ")", "# Loss cutoff.", "hparams", ".", "add_hparam", "(", "\"video_modality_loss_cutoff\"", ",", "0.01", ")", "# Additional resizing the frames before feeding them to model...	47.769231	0.02131
def kde_statsmodels_u(data, grid, **kwargs): """ Univariate Kernel Density Estimation with Statsmodels Parameters ---------- data : numpy.array Data points used to compute a density estimator. It has `n x 1` dimensions, representing n points and p variables. grid : numpy...	[ "def", "kde_statsmodels_u", "(", "data", ",", "grid", ",", "", "", "kwargs", ")", ":", "kde", "=", "KDEUnivariate", "(", "data", ")", "kde", ".", "fit", "(", "", "", "kwargs", ")", "return", "kde", ".", "evaluate", "(", "grid", ")" ]	27.434783	0.001531
def check(self, line_info): "Check if the initital identifier on the line is an alias." # Note: aliases can not contain '.' head = line_info.ifun.split('.',1)[0] if line_info.ifun not in self.shell.alias_manager \ or head not in self.shell.alias_manager \ or...	[ "def", "check", "(", "self", ",", "line_info", ")", ":", "# Note: aliases can not contain '.'", "head", "=", "line_info", ".", "ifun", ".", "split", "(", "'.'", ",", "1", ")", "[", "0", "]", "if", "line_info", ".", "ifun", "not", "in", "self", ".", "sh...	43.4	0.011287
def get_cql_models(app, connection=None, keyspace=None): """ :param app: django models module :param connection: connection name :param keyspace: keyspace :return: list of all cassandra.cqlengine.Model within app that should be synced to keyspace. """ from .models import DjangoCassandraM...	[ "def", "get_cql_models", "(", "app", ",", "connection", "=", "None", ",", "keyspace", "=", "None", ")", ":", "from", ".", "models", "import", "DjangoCassandraModel", "models", "=", "[", "]", "single_cassandra_connection", "=", "len", "(", "list", "(", "get_c...	37.103448	0.001812
def hash_token(token, salt): ''' Calculates the hash of a token and salt. input is unhexlified token and salt must contain an even number of hex digits or a binascii.Error exception will be raised ''' digest = hashes.Hash(sha(), backend=default_backend()) digest.update(binascii.unhexlif...	[ "def", "hash_token", "(", "token", ",", "salt", ")", ":", "digest", "=", "hashes", ".", "Hash", "(", "sha", "(", ")", ",", "backend", "=", "default_backend", "(", ")", ")", "digest", ".", "update", "(", "binascii", ".", "unhexlify", "(", "token", ")"...	34.833333	0.002331
def run( cmd, shell=False, cwd=None, log_in_real_time=True, check_returncode=True, callback=None, ): """ Run 'cmd' in a shell and return the combined contents of stdout and stderr (Blocking). Throws an exception if the command exits non-zero. :param cmd: list of str (or single str,...	[ "def", "run", "(", "cmd", ",", "shell", "=", "False", ",", "cwd", "=", "None", ",", "log_in_real_time", "=", "True", ",", "check_returncode", "=", "True", ",", "callback", "=", "None", ",", ")", ":", "proc", "=", "subprocess", ".", "Popen", "(", "cmd...	37.185714	0.000749
def cycle(self, *args): """Cycles among the arguments with the current loop index.""" if not args: raise TypeError('no items for cycling given') return args[self.index0 % len(args)]	[ "def", "cycle", "(", "self", ",", "*", "args", ")", ":", "if", "not", "args", ":", "raise", "TypeError", "(", "'no items for cycling given'", ")", "return", "args", "[", "self", ".", "index0", "%", "len", "(", "args", ")", "]" ]	42.6	0.009217
def upsert(self, conflict_target: List, fields: Dict, index_predicate: str=None) -> int: """Creates a new record or updates the existing one with the specified data. Arguments: conflict_target: Fields to pass into the ON CONFLICT clause. fields: ...	[ "def", "upsert", "(", "self", ",", "conflict_target", ":", "List", ",", "fields", ":", "Dict", ",", "index_predicate", ":", "str", "=", "None", ")", "->", "int", ":", "self", ".", "on_conflict", "(", "conflict_target", ",", "ConflictAction", ".", "UPDATE",...	34.333333	0.009447
def user_list(self, name=None, name_matches=None, min_level=None, max_level=None, level=None, user_id=None, order=None): """Function to get a list of users or a specific user. Levels: Users have a number attribute called level representing their role. The curre...	[ "def", "user_list", "(", "self", ",", "name", "=", "None", ",", "name_matches", "=", "None", ",", "min_level", "=", "None", ",", "max_level", "=", "None", ",", "level", "=", "None", ",", "user_id", "=", "None", ",", "order", "=", "None", ")", ":", ...	41.709677	0.002268
def value(self): """gets the color value""" if self._outline is None: return { "type" : self._type, "style" : self._style, "color" : self._color.value, } else: return { "type" : self._type, ...	[ "def", "value", "(", "self", ")", ":", "if", "self", ".", "_outline", "is", "None", ":", "return", "{", "\"type\"", ":", "self", ".", "_type", ",", "\"style\"", ":", "self", ".", "_style", ",", "\"color\"", ":", "self", ".", "_color", ".", "value", ...	29.666667	0.019608
def tick(self): """ Submits all the given jobs in the queue and watches their progress as they proceed. This function yields at the end of each iteration of the queue. :raises RuntimeError: If queue is locked. """ self.on_start() while not self.is_empty: ...	[ "def", "tick", "(", "self", ")", ":", "self", ".", "on_start", "(", ")", "while", "not", "self", ".", "is_empty", ":", "cruft", "=", "[", "]", "for", "job", "in", "self", ".", "queue", ":", "if", "not", "self", ".", "ready", "(", "job", ")", ":...	34.574074	0.001042
def set_ylabel(self, s, delay_draw=False): "set plot ylabel" self.conf.relabel(ylabel=s, delay_draw=delay_draw)	[ "def", "set_ylabel", "(", "self", ",", "s", ",", "delay_draw", "=", "False", ")", ":", "self", ".", "conf", ".", "relabel", "(", "ylabel", "=", "s", ",", "delay_draw", "=", "delay_draw", ")" ]	41.666667	0.015748
def type_name(self) -> T.Optional[str]: """Return type name associated with given docstring metadata.""" return self.args[1] if len(self.args) > 1 else None	[ "def", "type_name", "(", "self", ")", "->", "T", ".", "Optional", "[", "str", "]", ":", "return", "self", ".", "args", "[", "1", "]", "if", "len", "(", "self", ".", "args", ")", ">", "1", "else", "None" ]	56.666667	0.011628
def snapshot_report(result, config=None, html=True): """ Generate a snapshot report from a result set and configuration. Parameters ---------- result : memote.MemoteResult Nested dictionary structure as returned from the test suite. config : dict, optional The final test report ...	[ "def", "snapshot_report", "(", "result", ",", "config", "=", "None", ",", "html", "=", "True", ")", ":", "if", "config", "is", "None", ":", "config", "=", "ReportConfiguration", ".", "load", "(", ")", "report", "=", "SnapshotReport", "(", "result", "=", ...	31.666667	0.00146
def filter(self, other): """ Throw away those options which are not in the other one. Returns a new instance with the rejected options. """ self.canonify() other.canonify() rej = self.__class__() rej.optlist = self.optlist.difference(other.optlist) ...	[ "def", "filter", "(", "self", ",", "other", ")", ":", "self", ".", "canonify", "(", ")", "other", ".", "canonify", "(", ")", "rej", "=", "self", ".", "__class__", "(", ")", "rej", ".", "optlist", "=", "self", ".", "optlist", ".", "difference", "(",...	29.055556	0.011111
def default(fun, **kwdefault): """ change default value for function ex) def sample(a, b=1, c=1): print 'from sample:', a, b, c return a, b, c fun = default(sample, b=4,c=5) print fun.default # get default value dictionary fun(1) # print 1, 5, 5 and return :param fun: ...	[ "def", "default", "(", "fun", ",", "", "", "kwdefault", ")", ":", "@", "functools", ".", "wraps", "(", "fun", ")", "def", "wrapped", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "merge", "=", "wrapped", ".", "default", ".", "copy", "(",...	22.2	0.001727
def project_masks_on_boxes(segmentation_masks, proposals, discretization_size): """ Given segmentation masks and the bounding boxes corresponding to the location of the masks in the image, this function crops and resizes the masks in the position defined by the boxes. This prepares the masks for the...	[ "def", "project_masks_on_boxes", "(", "segmentation_masks", ",", "proposals", ",", "discretization_size", ")", ":", "masks", "=", "[", "]", "M", "=", "discretization_size", "device", "=", "proposals", ".", "bbox", ".", "device", "proposals", "=", "proposals", "....	45.470588	0.000633
def check_bundler(self): """ Run the bundler check. """ def get_config(name): return name if self.config('bundler.' + name) else '' from pkg_resources import Requirement, resource_filename relative_path = os.path.join('PyGitUp', 'check-bundler.rb') ...	[ "def", "check_bundler", "(", "self", ")", ":", "def", "get_config", "(", "name", ")", ":", "return", "name", "if", "self", ".", "config", "(", "'bundler.'", "+", "name", ")", "else", "''", "from", "pkg_resources", "import", "Requirement", ",", "resource_fi...	38.636364	0.002296
def _compat_rem_str_id_from_index(self, indexedField, pk, val, conn=None): ''' _compat_rem_str_id_from_index - Used in compat_convertHashedIndexes to remove the old string repr of a field, in order to later add the hashed value, ''' if conn is None: conn = self._get_connection() conn.srem(self._compat...	[ "def", "_compat_rem_str_id_from_index", "(", "self", ",", "indexedField", ",", "pk", ",", "val", ",", "conn", "=", "None", ")", ":", "if", "conn", "is", "None", ":", "conn", "=", "self", ".", "_get_connection", "(", ")", "conn", ".", "srem", "(", "self...	44.875	0.027322
def load( inputobj, c="gold", alpha=None, wire=False, bc=None, texture=None, smoothing=None, threshold=None, connectivity=False, ): """ Returns a ``vtkActor`` from reading a file, directory or ``vtkPolyData``. :param c: color in RGB format, hex, symbol or name :param...	[ "def", "load", "(", "inputobj", ",", "c", "=", "\"gold\"", ",", "alpha", "=", "None", ",", "wire", "=", "False", ",", "bc", "=", "None", ",", "texture", "=", "None", ",", "smoothing", "=", "None", ",", "threshold", "=", "None", ",", "connectivity", ...	30.245902	0.000525
def set_acl(self, **kwargs): # noqa: E501 """Set ACL for the specified dashboards # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.set_acl(async_req=True) ...	[ "def", "set_acl", "(", "self", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")", ":", "return", "self", ".", "set_acl_with_http_info", "(", "...	37.761905	0.00246
def _verify_cas1(ticket, service): """ Verifies CAS 1.0 authentication ticket. :param: ticket :param: service Returns username on success and None on failure. """ params = {'ticket': ticket, 'service': service} url = (urljoin(settings.CAS_SERVER_URL, 'validate') + '?' + url...	[ "def", "_verify_cas1", "(", "ticket", ",", "service", ")", ":", "params", "=", "{", "'ticket'", ":", "ticket", ",", "'service'", ":", "service", "}", "url", "=", "(", "urljoin", "(", "settings", ".", "CAS_SERVER_URL", ",", "'validate'", ")", "+", "'?'", ...	23.26087	0.001795
def Integer(name, base=10, encoding=None): """ Match an integer route parameter. :type name: `bytes` :param name: Route parameter name. :type base: `int` :param base: Base to interpret the value in. :type encoding: `bytes` :param encoding: Default encoding to assume if the ``Conten...	[ "def", "Integer", "(", "name", ",", "base", "=", "10", ",", "encoding", "=", "None", ")", ":", "def", "_match", "(", "request", ",", "value", ")", ":", "return", "name", ",", "query", ".", "Integer", "(", "value", ",", "base", "=", "base", ",", "...	28.090909	0.001565
def render_summary(self, include_title=True): """Render the traceback for the interactive console.""" title = "" classes = ["traceback"] if not self.frames: classes.append("noframe-traceback") frames = [] else: library_frames = sum(frame.is_lib...	[ "def", "render_summary", "(", "self", ",", "include_title", "=", "True", ")", ":", "title", "=", "\"\"", "classes", "=", "[", "\"traceback\"", "]", "if", "not", "self", ".", "frames", ":", "classes", ".", "append", "(", "\"noframe-traceback\"", ")", "frame...	38	0.00177
def get_username(self, user): """Retrieve username from user selector.""" if isinstance(user, basestring): return user elif isinstance(user, dict) and len(user) == 1: [(key, val)] = user.items() if key == 'username' or (key == self.user_model.USERNAME_FIELD): ...	[ "def", "get_username", "(", "self", ",", "user", ")", ":", "if", "isinstance", "(", "user", ",", "basestring", ")", ":", "return", "user", "elif", "isinstance", "(", "user", ",", "dict", ")", "and", "len", "(", "user", ")", "==", "1", ":", "[", "("...	45.75	0.001529
def acquire(self, blocking=True, delay=DELAY_INCREMENT, max_delay=MAX_DELAY, timeout=None): """Attempt to acquire the given lock. :param blocking: whether to wait forever to try to acquire the lock :type blocking: bool :param delay: when blocking this is ...	[ "def", "acquire", "(", "self", ",", "blocking", "=", "True", ",", "delay", "=", "DELAY_INCREMENT", ",", "max_delay", "=", "MAX_DELAY", ",", "timeout", "=", "None", ")", ":", "if", "delay", "<", "0", ":", "raise", "ValueError", "(", "\"Delay must be greater...	42.928571	0.002169
def post_process(func): """Calls the project handler same named function Note: the project handler may add some extra arguments to the command, so when use this decorator, add *kwargs to the end of the arguments """ @wraps(func) def wrapper(args, *kwargs): res = func(args, **...	[ "def", "post_process", "(", "func", ")", ":", "@", "wraps", "(", "func", ")", "def", "wrapper", "(", "", "args", ",", "", "", "kwargs", ")", ":", "res", "=", "func", "(", "", "args", ",", "", "", "kwargs", ")", "project_command", "=", "args...	31.368421	0.001629
def _contribute_to_class(self, mcs_args: McsArgs): """ Where the magic happens. Takes one parameter, the :class:`McsArgs` of the class-under-construction, and processes the declared ``class Meta`` from it (if any). We fill ourself with the declared meta options' name/value pairs, ...	[ "def", "_contribute_to_class", "(", "self", ",", "mcs_args", ":", "McsArgs", ")", ":", "self", ".", "_mcs_args", "=", "mcs_args", "Meta", "=", "mcs_args", ".", "clsdict", ".", "pop", "(", "'Meta'", ",", "None", ")", "# type: Type[object]", "base_classes_meta",...	55.772727	0.012019
def get_font(section='appearance', option='font', font_size_delta=0): """Get console font properties depending on OS and user options""" font = FONT_CACHE.get((section, option)) if font is None: families = CONF.get(section, option+"/family", None) if families is None: return QF...	[ "def", "get_font", "(", "section", "=", "'appearance'", ",", "option", "=", "'font'", ",", "font_size_delta", "=", "0", ")", ":", "font", "=", "FONT_CACHE", ".", "get", "(", "(", "section", ",", "option", ")", ")", "if", "font", "is", "None", ":", "f...	32.68	0.001189
def _weave_conflicting_selectors(prefixes, a, b, suffix=()): """Part of the selector merge algorithm above. Not useful on its own. Pay no attention to the man behind the curtain. """ # OK, what this actually does: given a list of selector chains, two # "conflicting" selector chains, and an optiona...	[ "def", "_weave_conflicting_selectors", "(", "prefixes", ",", "a", ",", "b", ",", "suffix", "=", "(", ")", ")", ":", "# OK, what this actually does: given a list of selector chains, two", "# \"conflicting\" selector chains, and an optional suffix, return a new list", "# of chains li...	43.7	0.00112
def get_value(self, tag=None, field=None): """Generate an integer whose bits are set according to the values of fields in this bit field. All other bits are set to zero. Parameters ---------- tag : str Optionally specifies that the value should only include fields wi...	[ "def", "get_value", "(", "self", ",", "tag", "=", "None", ",", "field", "=", "None", ")", ":", "assert", "not", "(", "tag", "is", "not", "None", "and", "field", "is", "not", "None", ")", ",", "\"Cannot filter by tag and field simultaneously.\"", "selected_fi...	39.041667	0.001041
def plot_raster(self,cell_dimension='N',time_dimension=0, resolution=1.0,units=None,min_t=None,max_t=None, weight_function=None,normalize_time=True,normalize_n=True, start_units_with_0=True,**kwargs): """Plots a raster plot with `cell_di...	[ "def", "plot_raster", "(", "self", ",", "cell_dimension", "=", "'N'", ",", "time_dimension", "=", "0", ",", "resolution", "=", "1.0", ",", "units", "=", "None", ",", "min_t", "=", "None", ",", "max_t", "=", "None", ",", "weight_function", "=", "None", ...	50.655172	0.016032
def accuracy(eval_data, predictions, scores='ignored', learner='ignored'): ''' Return the accuracy of each prediction in `predictions`: 1 if it is equal to the correct output in `eval_data`, 0 otherwise. >>> data = [Instance('input', 'correct'), ... Instance('input', 'correct'), ... ...	[ "def", "accuracy", "(", "eval_data", ",", "predictions", ",", "scores", "=", "'ignored'", ",", "learner", "=", "'ignored'", ")", ":", "return", "[", "int", "(", "inst", ".", "output", "==", "pred", ")", "for", "inst", ",", "pred", "in", "zip", "(", "...	39.692308	0.001894
def bell(self, percent = 0, onerror = None): """Ring the bell at the volume percent which is relative the base volume. See XBell(3X11).""" request.Bell(display = self.display, onerror = onerror, percent = percent)	[ "def", "bell", "(", "self", ",", "percent", "=", "0", ",", "onerror", "=", "None", ")", ":", "request", ".", "Bell", "(", "display", "=", "self", ".", "display", ",", "onerror", "=", "onerror", ",", "percent", "=", "percent", ")" ]	45.666667	0.043011
def make_time_tree(self, time_marginal=False, clock_rate=None, **kwargs): ''' Use the date constraints to calculate the most likely positions of unconstrained nodes. Parameters ---------- time_marginal : bool If true, use marginal reconstruction for node po...	[ "def", "make_time_tree", "(", "self", ",", "time_marginal", "=", "False", ",", "clock_rate", "=", "None", ",", "", "", "kwargs", ")", ":", "self", ".", "logger", "(", "\"ClockTree: Maximum likelihood tree optimization with temporal constraints\"", ",", "1", ")", ...	29.6	0.009162
def element_info_as_json(name): """ Get specified element META data based on search query This is the base level search that returns basic object info with the following attributes: * href: link to element * name: name of element * type: type of element :param str name: name of element...	[ "def", "element_info_as_json", "(", "name", ")", ":", "if", "name", ":", "element", "=", "fetch_meta_by_name", "(", "name", ")", "if", "element", ".", "json", ":", "return", "element", ".", "json" ]	29.529412	0.001931
def report(self, report_req): """Processes a report request. It will aggregate it with prior report_requests to be send later or it will send it immediately if that's appropriate. """ self.start() # no thread running, run the scheduler to ensure any pending # fl...	[ "def", "report", "(", "self", ",", "report_req", ")", ":", "self", ".", "start", "(", ")", "# no thread running, run the scheduler to ensure any pending", "# flush tasks are executed.", "if", "self", ".", "_run_scheduler_directly", ":", "self", ".", "_scheduler", ".", ...	40.380952	0.002304
def to_jd2(year, month, day): '''Gregorian to Julian Day Count for years between 1801-2099''' # http://quasar.as.utexas.edu/BillInfo/JulianDatesG.html legal_date(year, month, day) if month <= 2: year = year - 1 month = month + 12 a = floor(year / 100) b = floor(a / 4) c = ...	[ "def", "to_jd2", "(", "year", ",", "month", ",", "day", ")", ":", "# http://quasar.as.utexas.edu/BillInfo/JulianDatesG.html", "legal_date", "(", "year", ",", "month", ",", "day", ")", "if", "month", "<=", "2", ":", "year", "=", "year", "-", "1", "month", "...	26.5625	0.002273
def show(self): """Show the data graphically in a new pop-up window.""" # prevent the following error: # '_tkinter.TclError: no display name and no $DISPLAY environment # variable' # import matplotlib # matplotlib.use('GTK3Agg', warn=False) import matplotlib....	[ "def", "show", "(", "self", ")", ":", "# prevent the following error:", "# '_tkinter.TclError: no display name and no $DISPLAY environment", "# variable'", "# import matplotlib", "# matplotlib.use('GTK3Agg', warn=False)", "import", "matplotlib", ".", "pyplot", "as", "plt", "poin...	39.396226	0.000935
def parse_extra_model_fields(extra_model_fields): """ Parses the value of EXTRA_MODEL_FIELDS, grouping the entries by model and instantiating the extra fields. Returns a sequence of tuples of the form (model_key, fields) where model_key is a pair of app_label, model_name and fields is a list of (fie...	[ "def", "parse_extra_model_fields", "(", "extra_model_fields", ")", ":", "fields", "=", "defaultdict", "(", "list", ")", "for", "entry", "in", "extra_model_fields", ":", "model_key", ",", "field_name", "=", "parse_field_path", "(", "entry", "[", "0", "]", ")", ...	46.4	0.001056
def format (self, record): """Returns the given LogRecord as formatted text.""" record.hostname = self.hostname return logging.Formatter.format(self, record)	[ "def", "format", "(", "self", ",", "record", ")", ":", "record", ".", "hostname", "=", "self", ".", "hostname", "return", "logging", ".", "Formatter", ".", "format", "(", "self", ",", "record", ")" ]	44.5	0.016575
def split(compressed_data, segment_size, block_factory): """Splits compressed data into blocks. :param compressed_data: the compressed data to split :param segment_size: the size of a block in bytes :param block_factory: a BlockFactory used to construct the blocks :rtype: a list of block IDs of bl...	[ "def", "split", "(", "compressed_data", ",", "segment_size", ",", "block_factory", ")", ":", "# Split compressed data into blocks", "segments", "=", "[", "]", "current_segment_start", "=", "0", "index", "=", "0", "data_size", "=", "len", "(", "compressed_data", ")...	30.903226	0.000337
def _euristic_h_function(self, suffix, index): """ Вычисление h-эвристики из работы Hulden,2009 для текущей вершины словаря Аргументы: ---------- suffix : string непрочитанный суффикс входного слова index : int индекс текущего узла в словаре ...	[ "def", "_euristic_h_function", "(", "self", ",", "suffix", ",", "index", ")", ":", "if", "self", ".", "euristics", ">", "0", ":", "suffix", "=", "suffix", "[", ":", "self", ".", "euristics", "]", "# кэширование результатов", "index_temporary_euristics", "=", ...	36.805556	0.002206
def create(self): """Create the required directory structure and admin metadata.""" self._storage_broker.create_structure() self._storage_broker.put_admin_metadata(self._admin_metadata)	[ "def", "create", "(", "self", ")", ":", "self", ".", "_storage_broker", ".", "create_structure", "(", ")", "self", ".", "_storage_broker", ".", "put_admin_metadata", "(", "self", ".", "_admin_metadata", ")" ]	51.5	0.009569
def GetSizeHint(self, context=None, **unused_kwargs): """Retrieves a hint about the size. Args: context (Optional[DataTypeMapContext]): data type map context, used to determine the size hint. Returns: int: hint of the number of bytes needed from the byte stream or None. """ c...	[ "def", "GetSizeHint", "(", "self", ",", "context", "=", "None", ",", "", "", "unused_kwargs", ")", ":", "context_state", "=", "getattr", "(", "context", ",", "'state'", ",", "{", "}", ")", "elements_data_size", "=", "self", ".", "GetByteSize", "(", ")"...	29.911765	0.008571
def wireframe(self, pointsize=0.2, opacity=1.0): '''Display atoms as points of size pointsize and bonds as lines.''' self.points(pointsize, opacity=opacity) self.lines()	[ "def", "wireframe", "(", "self", ",", "pointsize", "=", "0.2", ",", "opacity", "=", "1.0", ")", ":", "self", ".", "points", "(", "pointsize", ",", "opacity", "=", "opacity", ")", "self", ".", "lines", "(", ")" ]	48	0.010256
def set_latency(self, latency): """Set client latency.""" self._client['config']['latency'] = latency yield from self._server.client_latency(self.identifier, latency)	[ "def", "set_latency", "(", "self", ",", "latency", ")", ":", "self", ".", "_client", "[", "'config'", "]", "[", "'latency'", "]", "=", "latency", "yield", "from", "self", ".", "_server", ".", "client_latency", "(", "self", ".", "identifier", ",", "latenc...	46.75	0.010526
def getIDfileDict(files): """ given a list of files, return a dict[ID]=[files]. This is made to assign children files to parent ABF IDs. """ d={} orphans=[] for fname in files: if fname.endswith(".abf"): d[os.path.basename(fname)[:-4]]=[] for fname in files: i...	[ "def", "getIDfileDict", "(", "files", ")", ":", "d", "=", "{", "}", "orphans", "=", "[", "]", "for", "fname", "in", "files", ":", "if", "fname", ".", "endswith", "(", "\".abf\"", ")", ":", "d", "[", "os", ".", "path", ".", "basename", "(", "fname...	36.52	0.016009
def avail_locations(call=None): ''' Return a dict of all available locations on the provider with relevant data. CLI Examples: .. code-block:: bash salt-cloud --list-locations my-qingcloud ''' if call == 'action': raise SaltCloudSystemExit( 'The avail_locations...	[ "def", "avail_locations", "(", "call", "=", "None", ")", ":", "if", "call", "==", "'action'", ":", "raise", "SaltCloudSystemExit", "(", "'The avail_locations function must be called with '", "'-f or --function, or with the --list-locations option'", ")", "params", "=", "{",...	24.206897	0.00137
def add_path(self, w, h): """Return a newly created `a:path` child element.""" path = self._add_path() path.w, path.h = w, h return path	[ "def", "add_path", "(", "self", ",", "w", ",", "h", ")", ":", "path", "=", "self", ".", "_add_path", "(", ")", "path", ".", "w", ",", "path", ".", "h", "=", "w", ",", "h", "return", "path" ]	32.8	0.011905
def generate_flattened_dict(headers, results): '''extract from results the fields in the headers list''' for name, values in results.items(): row = [] for header in headers: if header == 'name': row.append(name) elif ':' in header: neurite_...	[ "def", "generate_flattened_dict", "(", "headers", ",", "results", ")", ":", "for", "name", ",", "values", "in", "results", ".", "items", "(", ")", ":", "row", "=", "[", "]", "for", "header", "in", "headers", ":", "if", "header", "==", "'name'", ":", ...	36.615385	0.002049
def compress (input_filename, output_filename=None, verbose=False): """compress(input_filename, output_filename=None, verbose=False) -> integer Uses zlib to compress input_filename and store the result in output_filename. The size of output_filename is returned on success; zero is returned on failure. The ...	[ "def", "compress", "(", "input_filename", ",", "output_filename", "=", "None", ",", "verbose", "=", "False", ")", ":", "input_size", "=", "0", "output_size", "=", "0", "if", "output_filename", "is", "None", ":", "output_filename", "=", "input_fillename", "+", ...	28.555556	0.014296
def get_currencies(self, **params): """https://developers.coinbase.com/api/v2#currencies""" response = self._get('v2', 'currencies', params=params) return self._make_api_object(response, APIObject)	[ "def", "get_currencies", "(", "self", ",", "", "", "params", ")", ":", "response", "=", "self", ".", "_get", "(", "'v2'", ",", "'currencies'", ",", "params", "=", "params", ")", "return", "self", ".", "_make_api_object", "(", "response", ",", "APIObjec...	54.5	0.00905
def clean_data(input_value): ''' a function to transform a value into a json or yaml valid datatype :param input_value: object of any datatype :return: object with json valid datatype ''' # pass normal json/yaml datatypes if input_value.__class__.__name__ in ['bool', 'str', 'float', 'int', 'NoneT...	[ "def", "clean_data", "(", "input_value", ")", ":", "# pass normal json/yaml datatypes", "if", "input_value", ".", "__class__", ".", "__name__", "in", "[", "'bool'", ",", "'str'", ",", "'float'", ",", "'int'", ",", "'NoneType'", "]", ":", "pass", "# transform byt...	31.90625	0.001901
def check_for_upload_create(self, relative_path=None): """Traverse the relative_path tree and check for files that need to be uploaded/created. Relativity here refers to the shared directory tree.""" for f in os.listdir( path_join( self.local_path, relative_path) if ...	[ "def", "check_for_upload_create", "(", "self", ",", "relative_path", "=", "None", ")", ":", "for", "f", "in", "os", ".", "listdir", "(", "path_join", "(", "self", ".", "local_path", ",", "relative_path", ")", "if", "relative_path", "else", "self", ".", "lo...	46.777778	0.009324
def download(self, remotepath = '/', localpath = ''): ''' Usage: download [remotepath] [localpath] - \ download a remote directory (recursively) / file remotepath - remote path at Baidu Yun (after app root directory), if not specified, it is set to the root directory at Baidu Yun localpath - local path. if not sp...	[ "def", "download", "(", "self", ",", "remotepath", "=", "'/'", ",", "localpath", "=", "''", ")", ":", "subr", "=", "self", ".", "get_file_info", "(", "remotepath", ")", "if", "const", ".", "ENoError", "==", "subr", ":", "if", "'isdir'", "in", "self", ...	42.227273	0.029474
def remove_key(self, key): """Remove own key, value""" try: self._own_keys.discard(key) if self._parent and self._parent.has_key(key): self._container[key] = self._parent[key] else: del self._container[key] except KeyError: ...	[ "def", "remove_key", "(", "self", ",", "key", ")", ":", "try", ":", "self", ".", "_own_keys", ".", "discard", "(", "key", ")", "if", "self", ".", "_parent", "and", "self", ".", "_parent", ".", "has_key", "(", "key", ")", ":", "self", ".", "_contain...	32.3	0.009036
def comic_archive_compress(args): """ Called back by every optimization inside a comic archive. When they're all done it creates the new archive and cleans up. """ try: filename, old_format, settings, nag_about_gifs = args Settings.update(settings) tmp_dir = _get_archive_tmp...	[ "def", "comic_archive_compress", "(", "args", ")", ":", "try", ":", "filename", ",", "old_format", ",", "settings", ",", "nag_about_gifs", "=", "args", "Settings", ".", "update", "(", "settings", ")", "tmp_dir", "=", "_get_archive_tmp_dir", "(", "filename", ")...	31.151515	0.000943
def get_ts(ts): """ returns GPTS timescales. options are: ck95, gts04, and gts12 returns timescales and Chron labels """ if ts == 'ck95': TS = [0, 0.780, 0.990, 1.070, 1.770, 1.950, 2.140, 2.150, 2.581, 3.040, 3.110, 3.220, 3.330, 3.580, 4.180, 4.290, 4.480, 4.620, 4.800, 4.890, 4.980, ...	[ "def", "get_ts", "(", "ts", ")", ":", "if", "ts", "==", "'ck95'", ":", "TS", "=", "[", "0", ",", "0.780", ",", "0.990", ",", "1.070", ",", "1.770", ",", "1.950", ",", "2.140", ",", "2.150", ",", "2.581", ",", "3.040", ",", "3.110", ",", "3.220"...	386.961538	0.001289
def refresh_keys(context, id, etag): """refresh_keys(context, id, etag) Refresh a remoteci key pair. >>> dcictl remoteci-refresh-keys [OPTIONS] :param string id: ID of the remote CI [required] :param string etag: Entity tag of the remote CI resource [required] """ result = remoteci.refres...	[ "def", "refresh_keys", "(", "context", ",", "id", ",", "etag", ")", ":", "result", "=", "remoteci", ".", "refresh_keys", "(", "context", ",", "id", "=", "id", ",", "etag", "=", "etag", ")", "utils", ".", "format_output", "(", "result", ",", "context", ...	32.5	0.002494
def create_token(self, obj_id, extra_data): """Create a token referencing the object id with extra data.""" return self.engine.encrypt( super(EncryptedTokenMixIn, self).create_token(obj_id, extra_data) )	[ "def", "create_token", "(", "self", ",", "obj_id", ",", "extra_data", ")", ":", "return", "self", ".", "engine", ".", "encrypt", "(", "super", "(", "EncryptedTokenMixIn", ",", "self", ")", ".", "create_token", "(", "obj_id", ",", "extra_data", ")", ")" ]	47	0.008368
def _source_info(): """ Get information from the user's code (two frames up) to leave breadcrumbs for file, line, class and function. """ ofi = inspect.getouterframes(inspect.currentframe())[2] try: calling_class = ofi[0].f_locals['self'].__class__ except KeyError: calling_cl...	[ "def", "_source_info", "(", ")", ":", "ofi", "=", "inspect", ".", "getouterframes", "(", "inspect", ".", "currentframe", "(", ")", ")", "[", "2", "]", "try", ":", "calling_class", "=", "ofi", "[", "0", "]", ".", "f_locals", "[", "'self'", "]", ".", ...	35.083333	0.002315
def find(self, name, namespace=None): """ Find plugin object Parameters ---------- name : string A name of the object entry or full namespace namespace : string, optional A period separated namespace. E.g. `foo.bar.hogehoge` Returns ...	[ "def", "find", "(", "self", ",", "name", ",", "namespace", "=", "None", ")", ":", "if", "\".\"", "in", "name", ":", "namespace", ",", "name", "=", "name", ".", "rsplit", "(", "\".\"", ",", "1", ")", "caret", "=", "self", ".", "raw", "if", "namesp...	27.454545	0.001599
def transplant_class(cls, module): """ Make a class appear to reside in `module`, rather than the module in which it is actually defined. >>> from nose.failure import Failure >>> Failure.__module__ 'nose.failure' >>> Nf = transplant_class(Failure, __name__) >>> Nf.__module__ 'nose.u...	[ "def", "transplant_class", "(", "cls", ",", "module", ")", ":", "class", "C", "(", "cls", ")", ":", "pass", "C", ".", "__module__", "=", "module", "C", ".", "__name__", "=", "cls", ".", "__name__", "return", "C" ]	22.4	0.002141
def make_model(self): """Return the assembled HTML content as a string. Returns ------- str The assembled HTML as a string. """ stmts_formatted = [] stmt_rows = group_and_sort_statements(self.statements, s...	[ "def", "make_model", "(", "self", ")", ":", "stmts_formatted", "=", "[", "]", "stmt_rows", "=", "group_and_sort_statements", "(", "self", ".", "statements", ",", "self", ".", "ev_totals", "if", "self", ".", "ev_totals", "else", "None", ")", "for", "key", "...	46.840909	0.002376
def get_ordered_entries(self, queryset=False): """ Custom ordering. First we get the average views and rating for the categories's entries. Second we created a rank by multiplying both. Last, we sort categories by this rank from top to bottom. Example: - Cat_1 ...	[ "def", "get_ordered_entries", "(", "self", ",", "queryset", "=", "False", ")", ":", "if", "queryset", ":", "self", ".", "queryset", "=", "queryset", "else", ":", "self", ".", "queryset", "=", "EntryCategory", ".", "objects", ".", "all", "(", ")", "if", ...	40.642857	0.001144
def __add_location(self, type, args): """ Defines the slot triggered by Where_lineEdit* Widget when a context menu entry is clicked. :param type: Location type. :type type: unicode :param \args: Arguments. :type \args: \* """ if type == "directory"...	[ "def", "__add_location", "(", "self", ",", "type", ",", "*", "args", ")", ":", "if", "type", "==", "\"directory\"", ":", "location", "=", "umbra", ".", "ui", ".", "common", ".", "store_last_browsed_path", "(", "(", "QFileDialog", ".", "getExistingDirectory",...	57.928571	0.009703
def get_nucsat_subtrees(parented_tree): """Return all direct children of the given tree, that are either a nucleus, satellite or a leaf node (i.e. all children except for relation nodes.) """ if is_leaf(parented_tree): return [parented_tree] nucsat_children = [] for child in par...	[ "def", "get_nucsat_subtrees", "(", "parented_tree", ")", ":", "if", "is_leaf", "(", "parented_tree", ")", ":", "return", "[", "parented_tree", "]", "nucsat_children", "=", "[", "]", "for", "child", "in", "parented_tree", ":", "if", "is_leaf", "(", "child", "...	34.933333	0.009294
def sanitize_logger (self): """Make logger configuration consistent.""" if not self['output']: log.warn(LOG_CHECK, _("activating text logger output.")) self['output'] = 'text' self['logger'] = self.logger_new(self['output'])	[ "def", "sanitize_logger", "(", "self", ")", ":", "if", "not", "self", "[", "'output'", "]", ":", "log", ".", "warn", "(", "LOG_CHECK", ",", "_", "(", "\"activating text logger output.\"", ")", ")", "self", "[", "'output'", "]", "=", "'text'", "self", "["...	44.5	0.011029
def resize(self, width, height): """ Sets the new size and buffer size internally """ self.width = width self.height = height self.buffer_width, self.buffer_height = glfw.get_framebuffer_size(self.window) self.set_default_viewport()	[ "def", "resize", "(", "self", ",", "width", ",", "height", ")", ":", "self", ".", "width", "=", "width", "self", ".", "height", "=", "height", "self", ".", "buffer_width", ",", "self", ".", "buffer_height", "=", "glfw", ".", "get_framebuffer_size", "(", ...	35.125	0.010417
def get_template(template): """Read the given template file.""" with open(os.path.join(template_dir, template) + template_ext, "r") as template_file: return template_file.read()	[ "def", "get_template", "(", "template", ")", ":", "with", "open", "(", "os", ".", "path", ".", "join", "(", "template_dir", ",", "template", ")", "+", "template_ext", ",", "\"r\"", ")", "as", "template_file", ":", "return", "template_file", ".", "read", ...	47.5	0.010363
async def remove_async(self, type_name, entity): """Removes an entity asynchronously using the API. Shortcut for using async_call() with the 'Remove' method. :param type_name: The type of entity. :param entity: The entity to remove. :raise MyGeotabException: Raises when an exception occ...	[ "async", "def", "remove_async", "(", "self", ",", "type_name", ",", "entity", ")", ":", "return", "await", "self", ".", "call_async", "(", "'Remove'", ",", "type_name", "=", "type_name", ",", "entity", "=", "entity", ")" ]	58.333333	0.011257
def get_security_group_dict(): """Returns dictionary of named security groups {name: securitygroup}.""" client = get_ec2_client() response = client.describe_security_groups() assert is_good_response(response) result = OrderedDict() ec2 = get_ec2_resource() for security_group_response in response['Securi...	[ "def", "get_security_group_dict", "(", ")", ":", "client", "=", "get_ec2_client", "(", ")", "response", "=", "client", ".", "describe_security_groups", "(", ")", "assert", "is_good_response", "(", "response", ")", "result", "=", "OrderedDict", "(", ")", "ec2", ...	37.047619	0.015038
def load_module(path): ''' Imports the module specified by the path. Args : path : The path to the source file. ''' with add_to_path(os.path.dirname(path)): spec = importlib.util.spec_from_file_location(os.path.basename(path).replace('.py',''), path) modu...	[ "def", "load_module", "(", "path", ")", ":", "with", "add_to_path", "(", "os", ".", "path", ".", "dirname", "(", "path", ")", ")", ":", "spec", "=", "importlib", ".", "util", ".", "spec_from_file_location", "(", "os", ".", "path", ".", "basename", "(",...	37.363636	0.011876
def from_mpl(fig, savefig_kw=None): """Create a SVG figure from a ``matplotlib`` figure. Parameters ---------- fig : matplotlib.Figure instance savefig_kw : dict keyword arguments to be passed to matplotlib's `savefig` Returns ------- SVGFigure newly create...	[ "def", "from_mpl", "(", "fig", ",", "savefig_kw", "=", "None", ")", ":", "fid", "=", "StringIO", "(", ")", "if", "savefig_kw", "is", "None", ":", "savefig_kw", "=", "{", "}", "try", ":", "fig", ".", "savefig", "(", "fid", ",", "format", "=", "'svg'...	22.037037	0.000805
def untrace_function(module, function): """ Untraces given module function. :param module: Module of the function. :type module: object :param function: Function to untrace. :type function: object :return: Definition success. :rtype: bool """ if not is_traced(function): ...	[ "def", "untrace_function", "(", "module", ",", "function", ")", ":", "if", "not", "is_traced", "(", "function", ")", ":", "return", "False", "name", "=", "get_object_name", "(", "function", ")", "setattr", "(", "module", ",", "name", ",", "untracer", "(", ...	23.111111	0.002309
def search_databases(self, search_term, location=None, markets_only=False, databases_to_search=None, allow_internal=False): """ Search external databases linked to your lcopt model. To restrict the search to particular databases (e.g. technosphere or biosphere only) use a list of database name...	[ "def", "search_databases", "(", "self", ",", "search_term", ",", "location", "=", "None", ",", "markets_only", "=", "False", ",", "databases_to_search", "=", "None", ",", "allow_internal", "=", "False", ")", ":", "dict_list", "=", "[", "]", "if", "allow_inte...	40.068182	0.009413
def list_tables(self, num_results=None, marker=None, timeout=None): ''' Returns a generator to list the tables. The generator will lazily follow the continuation tokens returned by the service and stop when all tables have been returned or num_results is reached. If num_result...	[ "def", "list_tables", "(", "self", ",", "num_results", "=", "None", ",", "marker", "=", "None", ",", "timeout", "=", "None", ")", ":", "operation_context", "=", "_OperationContext", "(", "location_lock", "=", "True", ")", "kwargs", "=", "{", "'max_results'",...	53.878788	0.011602
def _decode_record(self, s, line=0): '''Decode one record of HEX file. @param s line with HEX record. @param line line number (for error messages). @raise EndOfFile if EOF record encountered. ''' s = s.rstrip('\r\n') if not s: return ...	[ "def", "_decode_record", "(", "self", ",", "s", ",", "line", "=", "0", ")", ":", "s", "=", "s", ".", "rstrip", "(", "'\\r\\n'", ")", "if", "not", "s", ":", "return", "# empty line", "if", "s", "[", "0", "]", "==", "':'", ":", "try", ":", "bin",...	36	0.001823
def strip_number(self): """The number of the strip that has changed state, with 0 being the first strip. On tablets with only one strip, this method always returns 0. For events not of type :attr:`~libinput.constant.EventType.TABLET_PAD_STRIP`, this property raises :exc:`AttributeError`. Returns: in...	[ "def", "strip_number", "(", "self", ")", ":", "if", "self", ".", "type", "!=", "EventType", ".", "TABLET_PAD_STRIP", ":", "raise", "AttributeError", "(", "_wrong_prop", ".", "format", "(", "self", ".", "type", ")", ")", "return", "self", ".", "_libinput", ...	28.35	0.02901
def stats(self): """Return dictionay with all stats at this level.""" assert self.backend.LOAD_count >= 0, "LOAD_count < 0" assert self.backend.LOAD_byte >= 0, "LOAD_byte < 0" assert self.backend.STORE_count >= 0, "STORE_count < 0" assert self.backend.STORE_byte >= 0, "STORE_byte...	[ "def", "stats", "(", "self", ")", ":", "assert", "self", ".", "backend", ".", "LOAD_count", ">=", "0", ",", "\"LOAD_count < 0\"", "assert", "self", ".", "backend", ".", "LOAD_byte", ">=", "0", ",", "\"LOAD_byte < 0\"", "assert", "self", ".", "backend", "."...	54.26087	0.001575
def _extract_word(self, source, position): """ Extracts the word that falls at or around a specific position :param source: The template source as a unicode string :param position: The position where the word falls :return: The word "...	[ "def", "_extract_word", "(", "self", ",", "source", ",", "position", ")", ":", "boundry", "=", "re", ".", "search", "(", "'{{\|{\|\\s\|$'", ",", "source", "[", ":", "position", "]", "[", ":", ":", "-", "1", "]", ")", "start_offset", "=", "boundry", ".",...	36.157895	0.008511
def window_bohman(N): r"""Bohman tapering window :param N: window length .. math:: w(n) = (1-\|x\|) \cos (\pi \|x\|) + \frac{1}{\pi} \sin(\pi \|x\|) where x is a length N vector of linearly spaced values between -1 and 1. .. plot:: :width: 80% :include-source: from spectru...	[ "def", "window_bohman", "(", "N", ")", ":", "x", "=", "linspace", "(", "-", "1", ",", "1", ",", "N", ")", "w", "=", "(", "1.", "-", "abs", "(", "x", ")", ")", "", "cos", "(", "pi", "", "abs", "(", "x", ")", ")", "+", "1.", "/", "pi", ...	23.636364	0.001848
def get_op_version(name): ''' .. versionadded:: 2019.2.0 Returns the glusterfs volume op-version name Name of the glusterfs volume CLI Example: .. code-block:: bash salt '*' glusterfs.get_op_version <volume> ''' cmd = 'volume get {0} cluster.op-version'.format(name)...	[ "def", "get_op_version", "(", "name", ")", ":", "cmd", "=", "'volume get {0} cluster.op-version'", ".", "format", "(", "name", ")", "root", "=", "_gluster_xml", "(", "cmd", ")", "if", "not", "_gluster_ok", "(", "root", ")", ":", "return", "False", ",", "ro...	22.575758	0.001287
def merge(self, options): """Returns new _CallSettings merged from this and a CallOptions object. Note that passing if the CallOptions instance specifies a page_token, the merged _CallSettings will have ``flatten_pages`` disabled. This permits toggling per-resource/per-page page streami...	[ "def", "merge", "(", "self", ",", "options", ")", ":", "if", "not", "options", ":", "return", "_CallSettings", "(", "timeout", "=", "self", ".", "timeout", ",", "retry", "=", "self", ".", "retry", ",", "page_descriptor", "=", "self", ".", "page_descripto...	35.592593	0.001013
def calculate_set_values(self): """ Calculate the expected totals based on set allocations """ for ac in self.asset_classes: ac.alloc_value = self.total_amount * ac.allocation / Decimal(100)	[ "def", "calculate_set_values", "(", "self", ")", ":", "for", "ac", "in", "self", ".", "asset_classes", ":", "ac", ".", "alloc_value", "=", "self", ".", "total_amount", "*", "ac", ".", "allocation", "/", "Decimal", "(", "100", ")" ]	53.75	0.009174
def enrich(self, sample, ontologyClass, path, callback=None, output='application/json'): """ Class Enrichment Service from: /analyzer/enrichment Arguments: sample: A list of CURIEs for nodes whose attributes are to be tested for enrichment. For example, a list of genes. ontol...	[ "def", "enrich", "(", "self", ",", "sample", ",", "ontologyClass", ",", "path", ",", "callback", "=", "None", ",", "output", "=", "'application/json'", ")", ":", "kwargs", "=", "{", "'sample'", ":", "sample", ",", "'ontologyClass'", ":", "ontologyClass", "...	63.736842	0.013019
def read_namespaced_resource_quota_status(self, name, namespace, **kwargs): # noqa: E501 """read_namespaced_resource_quota_status # noqa: E501 read status of the specified ResourceQuota # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP...	[ "def", "read_namespaced_resource_quota_status", "(", "self", ",", "name", ",", "namespace", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")", ":"...	53.782609	0.001589
def paginate(self, url, key, params=None): """ Fetch a sequence of paginated resources from the API endpoint. The initial request to ``url`` and all subsequent requests must respond with a JSON object; the field specified by ``key`` must be a list, whose elements will be yielded...	[ "def", "paginate", "(", "self", ",", "url", ",", "key", ",", "params", "=", "None", ")", ":", "if", "params", "is", "None", ":", "params", "=", "{", "}", "if", "self", ".", "per_page", "is", "not", "None", "and", "\"per_page\"", "not", "in", "param...	46.425	0.001582
def p_expression_logical(self, p): """ expression : expression logical expression """ p[0] = Expression(left=p[1], operator=p[2], right=p[3])	[ "def", "p_expression_logical", "(", "self", ",", "p", ")", ":", "p", "[", "0", "]", "=", "Expression", "(", "left", "=", "p", "[", "1", "]", ",", "operator", "=", "p", "[", "2", "]", ",", "right", "=", "p", "[", "3", "]", ")" ]	33.8	0.011561

def create_data_and_metadata(self, data: numpy.ndarray, intensity_calibration: CalibrationModule.Calibration = None, dimensional_calibrations: typing.List[CalibrationModule.Calibration] = None, metadata: dict = None, timestamp: str = None, data_descripto...

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def ping(self): """Ping this hook. :returns: bool """ url = self._build_url('pings', base_url=self._api) return self._boolean(self._post(url), 204, 404)

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def draw_image_color_segments(source, clusters, hide_axes = True): """! @brief Shows image segments using colored image. @details Each color on result image represents allocated segment. The first image is initial and other is result of segmentation. @param[in] source (string): Path to image. ...

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def combine_HSPs(a): """ Combine HSPs into a single BlastLine. """ m = a[0] if len(a) == 1: return m for b in a[1:]: assert m.query == b.query assert m.subject == b.subject m.hitlen += b.hitlen m.nmismatch += b.nmismatch m.ngaps += b.ngaps ...

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def _process_command(self, command, name=None): """Process ``make_ndx`` command and return name and temp index file.""" self._command_counter += 1 if name is None: name = "CMD{0:03d}".format(self._command_counter) # Need to build it with two make_ndx calls because I cannot...

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def previous_pages_numbers(self): 'A generator of previous page integers.' count = self._previous_pages_count() + 1 for i in reversed(range(1, count)): yield i

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async def get_authenticated_user( self, http_client: httpclient.AsyncHTTPClient = None ) -> Dict[str, Any]: """Gets the OAuth authorized user and access token. This method should be called from the handler for your OAuth callback URL to complete the registration process. We run the ...

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def dump_directory_structure(out = sys.stdout): """ Dumps a detailed report of the turicreate/sframe directory structure and files, along with the output of os.lstat for each. This is useful for debugging purposes. """ "Dumping Installation Directory Structure for Debugging: " import sys,...

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def pivot_query_as_matrix(facet=None, facet_pivot_fields=None, **kwargs): """ Pivot query """ if facet_pivot_fields is None: facet_pivot_fields = [] logging.info("Additional args: {}".format(kwargs)) fp = search_associations(rows=0, facet_fields=[facet], ...

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def _load_config(self, client_secrets_file, client_id, client_secret): """Loads oauth2 configuration in order of priority. Priority: 1. Config passed to the constructor or init_app. 2. Config passed via the GOOGLE_OAUTH2_CLIENT_SECRETS_FILE app config. ...

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def next_frame_base(): """Common HParams for next_frame models.""" hparams = common_hparams.basic_params1() # Loss cutoff. hparams.add_hparam("video_modality_loss_cutoff", 0.01) # Additional resizing the frames before feeding them to model. hparams.add_hparam("preprocess_resize_frames", None) # How many d...

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def kde_statsmodels_u(data, grid, **kwargs): """ Univariate Kernel Density Estimation with Statsmodels Parameters ---------- data : numpy.array Data points used to compute a density estimator. It has `n x 1` dimensions, representing n points and p variables. grid : numpy...

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def check(self, line_info): "Check if the initital identifier on the line is an alias." # Note: aliases can not contain '.' head = line_info.ifun.split('.',1)[0] if line_info.ifun not in self.shell.alias_manager \ or head not in self.shell.alias_manager \ or...

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def get_cql_models(app, connection=None, keyspace=None): """ :param app: django models module :param connection: connection name :param keyspace: keyspace :return: list of all cassandra.cqlengine.Model within app that should be synced to keyspace. """ from .models import DjangoCassandraM...

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def hash_token(token, salt): ''' Calculates the hash of a token and salt. input is unhexlified token and salt must contain an even number of hex digits or a binascii.Error exception will be raised ''' digest = hashes.Hash(sha(), backend=default_backend()) digest.update(binascii.unhexlif...

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def run( cmd, shell=False, cwd=None, log_in_real_time=True, check_returncode=True, callback=None, ): """ Run 'cmd' in a shell and return the combined contents of stdout and stderr (Blocking). Throws an exception if the command exits non-zero. :param cmd: list of str (or single str,...

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def cycle(self, *args): """Cycles among the arguments with the current loop index.""" if not args: raise TypeError('no items for cycling given') return args[self.index0 % len(args)]

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def upsert(self, conflict_target: List, fields: Dict, index_predicate: str=None) -> int: """Creates a new record or updates the existing one with the specified data. Arguments: conflict_target: Fields to pass into the ON CONFLICT clause. fields: ...

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def user_list(self, name=None, name_matches=None, min_level=None, max_level=None, level=None, user_id=None, order=None): """Function to get a list of users or a specific user. Levels: Users have a number attribute called level representing their role. The curre...

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def value(self): """gets the color value""" if self._outline is None: return { "type" : self._type, "style" : self._style, "color" : self._color.value, } else: return { "type" : self._type, ...

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def tick(self): """ Submits all the given jobs in the queue and watches their progress as they proceed. This function yields at the end of each iteration of the queue. :raises RuntimeError: If queue is locked. """ self.on_start() while not self.is_empty: ...

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def set_ylabel(self, s, delay_draw=False): "set plot ylabel" self.conf.relabel(ylabel=s, delay_draw=delay_draw)

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def type_name(self) -> T.Optional[str]: """Return type name associated with given docstring metadata.""" return self.args[1] if len(self.args) > 1 else None

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def snapshot_report(result, config=None, html=True): """ Generate a snapshot report from a result set and configuration. Parameters ---------- result : memote.MemoteResult Nested dictionary structure as returned from the test suite. config : dict, optional The final test report ...

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def filter(self, other): """ Throw away those options which are not in the other one. Returns a new instance with the rejected options. """ self.canonify() other.canonify() rej = self.__class__() rej.optlist = self.optlist.difference(other.optlist) ...

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def default(fun, **kwdefault): """ change default value for function ex) def sample(a, b=1, c=1): print 'from sample:', a, b, c return a, b, c fun = default(sample, b=4,c=5) print fun.default # get default value dictionary fun(1) # print 1, 5, 5 and return :param fun: ...

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def project_masks_on_boxes(segmentation_masks, proposals, discretization_size): """ Given segmentation masks and the bounding boxes corresponding to the location of the masks in the image, this function crops and resizes the masks in the position defined by the boxes. This prepares the masks for the...

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def check_bundler(self): """ Run the bundler check. """ def get_config(name): return name if self.config('bundler.' + name) else '' from pkg_resources import Requirement, resource_filename relative_path = os.path.join('PyGitUp', 'check-bundler.rb') ...

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def _compat_rem_str_id_from_index(self, indexedField, pk, val, conn=None): ''' _compat_rem_str_id_from_index - Used in compat_convertHashedIndexes to remove the old string repr of a field, in order to later add the hashed value, ''' if conn is None: conn = self._get_connection() conn.srem(self._compat...

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def load( inputobj, c="gold", alpha=None, wire=False, bc=None, texture=None, smoothing=None, threshold=None, connectivity=False, ): """ Returns a ``vtkActor`` from reading a file, directory or ``vtkPolyData``. :param c: color in RGB format, hex, symbol or name :param...

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def set_acl(self, **kwargs): # noqa: E501 """Set ACL for the specified dashboards # noqa: E501 # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.set_acl(async_req=True) ...

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def _verify_cas1(ticket, service): """ Verifies CAS 1.0 authentication ticket. :param: ticket :param: service Returns username on success and None on failure. """ params = {'ticket': ticket, 'service': service} url = (urljoin(settings.CAS_SERVER_URL, 'validate') + '?' + url...

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def Integer(name, base=10, encoding=None): """ Match an integer route parameter. :type name: `bytes` :param name: Route parameter name. :type base: `int` :param base: Base to interpret the value in. :type encoding: `bytes` :param encoding: Default encoding to assume if the ``Conten...

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def render_summary(self, include_title=True): """Render the traceback for the interactive console.""" title = "" classes = ["traceback"] if not self.frames: classes.append("noframe-traceback") frames = [] else: library_frames = sum(frame.is_lib...

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def get_username(self, user): """Retrieve username from user selector.""" if isinstance(user, basestring): return user elif isinstance(user, dict) and len(user) == 1: [(key, val)] = user.items() if key == 'username' or (key == self.user_model.USERNAME_FIELD): ...

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def acquire(self, blocking=True, delay=DELAY_INCREMENT, max_delay=MAX_DELAY, timeout=None): """Attempt to acquire the given lock. :param blocking: whether to wait forever to try to acquire the lock :type blocking: bool :param delay: when blocking this is ...

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def post_process(func): """Calls the project handler same named function Note: the project handler may add some extra arguments to the command, so when use this decorator, add **kwargs to the end of the arguments """ @wraps(func) def wrapper(*args, **kwargs): res = func(*args, **...

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def _contribute_to_class(self, mcs_args: McsArgs): """ Where the magic happens. Takes one parameter, the :class:`McsArgs` of the class-under-construction, and processes the declared ``class Meta`` from it (if any). We fill ourself with the declared meta options' name/value pairs, ...

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def get_font(section='appearance', option='font', font_size_delta=0): """Get console font properties depending on OS and user options""" font = FONT_CACHE.get((section, option)) if font is None: families = CONF.get(section, option+"/family", None) if families is None: return QF...

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def _weave_conflicting_selectors(prefixes, a, b, suffix=()): """Part of the selector merge algorithm above. Not useful on its own. Pay no attention to the man behind the curtain. """ # OK, what this actually does: given a list of selector chains, two # "conflicting" selector chains, and an optiona...

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def get_value(self, tag=None, field=None): """Generate an integer whose bits are set according to the values of fields in this bit field. All other bits are set to zero. Parameters ---------- tag : str Optionally specifies that the value should only include fields wi...

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def plot_raster(self,cell_dimension='N',time_dimension=0, resolution=1.0,units=None,min_t=None,max_t=None, weight_function=None,normalize_time=True,normalize_n=True, start_units_with_0=True,**kwargs): """Plots a raster plot with `cell_di...

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def accuracy(eval_data, predictions, scores='ignored', learner='ignored'): ''' Return the accuracy of each prediction in `predictions`: 1 if it is equal to the correct output in `eval_data`, 0 otherwise. >>> data = [Instance('input', 'correct'), ... Instance('input', 'correct'), ... ...

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def bell(self, percent = 0, onerror = None): """Ring the bell at the volume percent which is relative the base volume. See XBell(3X11).""" request.Bell(display = self.display, onerror = onerror, percent = percent)

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def make_time_tree(self, time_marginal=False, clock_rate=None, **kwargs): ''' Use the date constraints to calculate the most likely positions of unconstrained nodes. Parameters ---------- time_marginal : bool If true, use marginal reconstruction for node po...

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def element_info_as_json(name): """ Get specified element META data based on search query This is the base level search that returns basic object info with the following attributes: * href: link to element * name: name of element * type: type of element :param str name: name of element...

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def report(self, report_req): """Processes a report request. It will aggregate it with prior report_requests to be send later or it will send it immediately if that's appropriate. """ self.start() # no thread running, run the scheduler to ensure any pending # fl...

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def to_jd2(year, month, day): '''Gregorian to Julian Day Count for years between 1801-2099''' # http://quasar.as.utexas.edu/BillInfo/JulianDatesG.html legal_date(year, month, day) if month <= 2: year = year - 1 month = month + 12 a = floor(year / 100) b = floor(a / 4) c = ...

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def show(self): """Show the data graphically in a new pop-up window.""" # prevent the following error: # '_tkinter.TclError: no display name and no $DISPLAY environment # variable' # import matplotlib # matplotlib.use('GTK3Agg', warn=False) import matplotlib....

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def parse_extra_model_fields(extra_model_fields): """ Parses the value of EXTRA_MODEL_FIELDS, grouping the entries by model and instantiating the extra fields. Returns a sequence of tuples of the form (model_key, fields) where model_key is a pair of app_label, model_name and fields is a list of (fie...

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def format (self, record): """Returns the given LogRecord as formatted text.""" record.hostname = self.hostname return logging.Formatter.format(self, record)

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def split(compressed_data, segment_size, block_factory): """Splits compressed data into blocks. :param compressed_data: the compressed data to split :param segment_size: the size of a block in bytes :param block_factory: a BlockFactory used to construct the blocks :rtype: a list of block IDs of bl...

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def _euristic_h_function(self, suffix, index): """ Вычисление h-эвристики из работы Hulden,2009 для текущей вершины словаря Аргументы: ---------- suffix : string непрочитанный суффикс входного слова index : int индекс текущего узла в словаре ...

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def create(self): """Create the required directory structure and admin metadata.""" self._storage_broker.create_structure() self._storage_broker.put_admin_metadata(self._admin_metadata)

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def GetSizeHint(self, context=None, **unused_kwargs): """Retrieves a hint about the size. Args: context (Optional[DataTypeMapContext]): data type map context, used to determine the size hint. Returns: int: hint of the number of bytes needed from the byte stream or None. """ c...

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def wireframe(self, pointsize=0.2, opacity=1.0): '''Display atoms as points of size *pointsize* and bonds as lines.''' self.points(pointsize, opacity=opacity) self.lines()

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def set_latency(self, latency): """Set client latency.""" self._client['config']['latency'] = latency yield from self._server.client_latency(self.identifier, latency)

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def getIDfileDict(files): """ given a list of files, return a dict[ID]=[files]. This is made to assign children files to parent ABF IDs. """ d={} orphans=[] for fname in files: if fname.endswith(".abf"): d[os.path.basename(fname)[:-4]]=[] for fname in files: i...

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def avail_locations(call=None): ''' Return a dict of all available locations on the provider with relevant data. CLI Examples: .. code-block:: bash salt-cloud --list-locations my-qingcloud ''' if call == 'action': raise SaltCloudSystemExit( 'The avail_locations...

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def add_path(self, w, h): """Return a newly created `a:path` child element.""" path = self._add_path() path.w, path.h = w, h return path

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def generate_flattened_dict(headers, results): '''extract from results the fields in the headers list''' for name, values in results.items(): row = [] for header in headers: if header == 'name': row.append(name) elif ':' in header: neurite_...

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def compress (input_filename, output_filename=None, verbose=False): """compress(input_filename, output_filename=None, verbose=False) -> integer Uses zlib to compress input_filename and store the result in output_filename. The size of output_filename is returned on success; zero is returned on failure. The ...

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def get_currencies(self, **params): """https://developers.coinbase.com/api/v2#currencies""" response = self._get('v2', 'currencies', params=params) return self._make_api_object(response, APIObject)

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def clean_data(input_value): ''' a function to transform a value into a json or yaml valid datatype :param input_value: object of any datatype :return: object with json valid datatype ''' # pass normal json/yaml datatypes if input_value.__class__.__name__ in ['bool', 'str', 'float', 'int', 'NoneT...

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def check_for_upload_create(self, relative_path=None): """Traverse the relative_path tree and check for files that need to be uploaded/created. Relativity here refers to the shared directory tree.""" for f in os.listdir( path_join( self.local_path, relative_path) if ...

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def download(self, remotepath = '/', localpath = ''): ''' Usage: download [remotepath] [localpath] - \ download a remote directory (recursively) / file remotepath - remote path at Baidu Yun (after app root directory), if not specified, it is set to the root directory at Baidu Yun localpath - local path. if not sp...

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def remove_key(self, key): """Remove own key, value""" try: self._own_keys.discard(key) if self._parent and self._parent.has_key(key): self._container[key] = self._parent[key] else: del self._container[key] except KeyError: ...

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def comic_archive_compress(args): """ Called back by every optimization inside a comic archive. When they're all done it creates the new archive and cleans up. """ try: filename, old_format, settings, nag_about_gifs = args Settings.update(settings) tmp_dir = _get_archive_tmp...

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def get_ts(ts): """ returns GPTS timescales. options are: ck95, gts04, and gts12 returns timescales and Chron labels """ if ts == 'ck95': TS = [0, 0.780, 0.990, 1.070, 1.770, 1.950, 2.140, 2.150, 2.581, 3.040, 3.110, 3.220, 3.330, 3.580, 4.180, 4.290, 4.480, 4.620, 4.800, 4.890, 4.980, ...

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def refresh_keys(context, id, etag): """refresh_keys(context, id, etag) Refresh a remoteci key pair. >>> dcictl remoteci-refresh-keys [OPTIONS] :param string id: ID of the remote CI [required] :param string etag: Entity tag of the remote CI resource [required] """ result = remoteci.refres...

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32.5

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def create_token(self, obj_id, extra_data): """Create a token referencing the object id with extra data.""" return self.engine.encrypt( super(EncryptedTokenMixIn, self).create_token(obj_id, extra_data) )

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47

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def _source_info(): """ Get information from the user's code (two frames up) to leave breadcrumbs for file, line, class and function. """ ofi = inspect.getouterframes(inspect.currentframe())[2] try: calling_class = ofi[0].f_locals['self'].__class__ except KeyError: calling_cl...

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def find(self, name, namespace=None): """ Find plugin object Parameters ---------- name : string A name of the object entry or full namespace namespace : string, optional A period separated namespace. E.g. `foo.bar.hogehoge` Returns ...

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def transplant_class(cls, module): """ Make a class appear to reside in `module`, rather than the module in which it is actually defined. >>> from nose.failure import Failure >>> Failure.__module__ 'nose.failure' >>> Nf = transplant_class(Failure, __name__) >>> Nf.__module__ 'nose.u...

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def make_model(self): """Return the assembled HTML content as a string. Returns ------- str The assembled HTML as a string. """ stmts_formatted = [] stmt_rows = group_and_sort_statements(self.statements, s...

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def get_ordered_entries(self, queryset=False): """ Custom ordering. First we get the average views and rating for the categories's entries. Second we created a rank by multiplying both. Last, we sort categories by this rank from top to bottom. Example: - Cat_1 ...

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def __add_location(self, type, *args): """ Defines the slot triggered by **Where_lineEdit** Widget when a context menu entry is clicked. :param type: Location type. :type type: unicode :param \*args: Arguments. :type \*args: \* """ if type == "directory"...

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def get_nucsat_subtrees(parented_tree): """Return all direct children of the given tree, that are either a nucleus, satellite or a leaf node (i.e. all children except for relation nodes.) """ if is_leaf(parented_tree): return [parented_tree] nucsat_children = [] for child in par...

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def sanitize_logger (self): """Make logger configuration consistent.""" if not self['output']: log.warn(LOG_CHECK, _("activating text logger output.")) self['output'] = 'text' self['logger'] = self.logger_new(self['output'])

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def resize(self, width, height): """ Sets the new size and buffer size internally """ self.width = width self.height = height self.buffer_width, self.buffer_height = glfw.get_framebuffer_size(self.window) self.set_default_viewport()

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def get_template(template): """Read the given template file.""" with open(os.path.join(template_dir, template) + template_ext, "r") as template_file: return template_file.read()

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async def remove_async(self, type_name, entity): """Removes an entity asynchronously using the API. Shortcut for using async_call() with the 'Remove' method. :param type_name: The type of entity. :param entity: The entity to remove. :raise MyGeotabException: Raises when an exception occ...

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def get_security_group_dict(): """Returns dictionary of named security groups {name: securitygroup}.""" client = get_ec2_client() response = client.describe_security_groups() assert is_good_response(response) result = OrderedDict() ec2 = get_ec2_resource() for security_group_response in response['Securi...

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def load_module(path): ''' Imports the module specified by the path. Args : path : The path to the source file. ''' with add_to_path(os.path.dirname(path)): spec = importlib.util.spec_from_file_location(os.path.basename(path).replace('.py',''), path) modu...

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def from_mpl(fig, savefig_kw=None): """Create a SVG figure from a ``matplotlib`` figure. Parameters ---------- fig : matplotlib.Figure instance savefig_kw : dict keyword arguments to be passed to matplotlib's `savefig` Returns ------- SVGFigure newly create...

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def untrace_function(module, function): """ Untraces given module function. :param module: Module of the function. :type module: object :param function: Function to untrace. :type function: object :return: Definition success. :rtype: bool """ if not is_traced(function): ...

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def search_databases(self, search_term, location=None, markets_only=False, databases_to_search=None, allow_internal=False): """ Search external databases linked to your lcopt model. To restrict the search to particular databases (e.g. technosphere or biosphere only) use a list of database name...

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def list_tables(self, num_results=None, marker=None, timeout=None): ''' Returns a generator to list the tables. The generator will lazily follow the continuation tokens returned by the service and stop when all tables have been returned or num_results is reached. If num_result...

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def _decode_record(self, s, line=0): '''Decode one record of HEX file. @param s line with HEX record. @param line line number (for error messages). @raise EndOfFile if EOF record encountered. ''' s = s.rstrip('\r\n') if not s: return ...

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def strip_number(self): """The number of the strip that has changed state, with 0 being the first strip. On tablets with only one strip, this method always returns 0. For events not of type :attr:`~libinput.constant.EventType.TABLET_PAD_STRIP`, this property raises :exc:`AttributeError`. Returns: in...

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def stats(self): """Return dictionay with all stats at this level.""" assert self.backend.LOAD_count >= 0, "LOAD_count < 0" assert self.backend.LOAD_byte >= 0, "LOAD_byte < 0" assert self.backend.STORE_count >= 0, "STORE_count < 0" assert self.backend.STORE_byte >= 0, "STORE_byte...

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def _extract_word(self, source, position): """ Extracts the word that falls at or around a specific position :param source: The template source as a unicode string :param position: The position where the word falls :return: The word "...

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def window_bohman(N): r"""Bohman tapering window :param N: window length .. math:: w(n) = (1-|x|) \cos (\pi |x|) + \frac{1}{\pi} \sin(\pi |x|) where x is a length N vector of linearly spaced values between -1 and 1. .. plot:: :width: 80% :include-source: from spectru...

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def get_op_version(name): ''' .. versionadded:: 2019.2.0 Returns the glusterfs volume op-version name Name of the glusterfs volume CLI Example: .. code-block:: bash salt '*' glusterfs.get_op_version <volume> ''' cmd = 'volume get {0} cluster.op-version'.format(name)...

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def merge(self, options): """Returns new _CallSettings merged from this and a CallOptions object. Note that passing if the CallOptions instance specifies a page_token, the merged _CallSettings will have ``flatten_pages`` disabled. This permits toggling per-resource/per-page page streami...

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def calculate_set_values(self): """ Calculate the expected totals based on set allocations """ for ac in self.asset_classes: ac.alloc_value = self.total_amount * ac.allocation / Decimal(100)

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def enrich(self, sample, ontologyClass, path, callback=None, output='application/json'): """ Class Enrichment Service from: /analyzer/enrichment Arguments: sample: A list of CURIEs for nodes whose attributes are to be tested for enrichment. For example, a list of genes. ontol...

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def read_namespaced_resource_quota_status(self, name, namespace, **kwargs): # noqa: E501 """read_namespaced_resource_quota_status # noqa: E501 read status of the specified ResourceQuota # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP...

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def paginate(self, url, key, params=None): """ Fetch a sequence of paginated resources from the API endpoint. The initial request to ``url`` and all subsequent requests must respond with a JSON object; the field specified by ``key`` must be a list, whose elements will be yielded...

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def p_expression_logical(self, p): """ expression : expression logical expression """ p[0] = Expression(left=p[1], operator=p[2], right=p[3])

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