kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def triangulate(self): """Do the triangulation """ self._initialize() pts = self.pts front = self._front ## Begin sweep (sec. 3.4) for i in range(3, pts.shape[0]): pi = pts[i] #debug("========== New point %d: %s ==========...	[ "def", "triangulate", "(", "self", ")", ":", "self", ".", "_initialize", "(", ")", "pts", "=", "self", ".", "pts", "front", "=", "self", ".", "_front", "## Begin sweep (sec. 3.4)", "for", "i", "in", "range", "(", "3", ",", "pts", ".", "shape", "[", "...	37.678161	0.009215
def imwrite(file, data=None, shape=None, dtype=None, **kwargs): """Write numpy array to TIFF file. Refer to the TiffWriter class and its asarray function for documentation. A BigTIFF file is created if the data size in bytes is larger than 4 GB minus 32 MB (for metadata), and 'bigtiff' is not specifie...	[ "def", "imwrite", "(", "file", ",", "data", "=", "None", ",", "shape", "=", "None", ",", "dtype", "=", "None", ",", "", "", "kwargs", ")", ":", "tifargs", "=", "parse_kwargs", "(", "kwargs", ",", "'append'", ",", "'bigtiff'", ",", "'byteorder'", ",...	38.45614	0.000445
def to_numpy(nd4j_array): """ Convert an ND4J array to a numpy array :param nd4j_array: :return: """ buff = nd4j_array.data() address = buff.pointer().address() type_name = java_classes.DataTypeUtil.getDtypeFromContext() data_type = java_classes.DataTypeUtil.getDTypeForName(type_name) ...	[ "def", "to_numpy", "(", "nd4j_array", ")", ":", "buff", "=", "nd4j_array", ".", "data", "(", ")", "address", "=", "buff", ".", "pointer", "(", ")", ".", "address", "(", ")", "type_name", "=", "java_classes", ".", "DataTypeUtil", ".", "getDtypeFromContext",...	33.882353	0.001689
def connect(self, protocol=None): """! @brief Initialize DAP IO pins for JTAG or SWD""" self._link.enter_debug(STLink.Protocol.SWD) self._is_connected = True	[ "def", "connect", "(", "self", ",", "protocol", "=", "None", ")", ":", "self", ".", "_link", ".", "enter_debug", "(", "STLink", ".", "Protocol", ".", "SWD", ")", "self", ".", "_is_connected", "=", "True" ]	44.5	0.01105
def only_pallets_theme(default=None): """Create a decorator that calls a function only if the ``is_pallets_theme`` config is ``True``. Used to prevent Sphinx event callbacks from doing anything if the Pallets themes are installed but not used. :: @only_pallets_theme() def inject_value(...	[ "def", "only_pallets_theme", "(", "default", "=", "None", ")", ":", "def", "decorator", "(", "f", ")", ":", "@", "wraps", "(", "f", ")", "def", "wrapped", "(", "app", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "if", "not", "app", ".", ...	25.892857	0.00133
def parse_change_info(e_change_info): """ Parses a ChangeInfo tag. Seen in CreateHostedZone, DeleteHostedZone, and ChangeResourceRecordSetsRequest. :param lxml.etree._Element e_change_info: A ChangeInfo element. :rtype: dict :returns: A dict representation of the change info. """ if e_...	[ "def", "parse_change_info", "(", "e_change_info", ")", ":", "if", "e_change_info", "is", "None", ":", "return", "e_change_info", "status", "=", "e_change_info", ".", "find", "(", "'./{*}Status'", ")", ".", "text", "submitted_at", "=", "e_change_info", ".", "find...	29.363636	0.001499
def limited_join(sep, items, max_chars=30, overflow_marker="..."): """Join a number of strings to one, limiting the length to max_chars. If the string overflows this limit, replace the last fitting item by overflow_marker. Returns: joined_string """ full_str = sep.join(items) if len(fu...	[ "def", "limited_join", "(", "sep", ",", "items", ",", "max_chars", "=", "30", ",", "overflow_marker", "=", "\"...\"", ")", ":", "full_str", "=", "sep", ".", "join", "(", "items", ")", "if", "len", "(", "full_str", ")", "<", "max_chars", ":", "return", ...	28.590909	0.001538
def persist(self, ttl=None, **kwargs): """Save data from this source to local persistent storage""" from ..container import container_map from ..container.persist import PersistStore import time if 'original_tok' in self.metadata: raise ValueError('Cannot persist a so...	[ "def", "persist", "(", "self", ",", "ttl", "=", "None", ",", "", "", "kwargs", ")", ":", "from", ".", ".", "container", "import", "container_map", "from", ".", ".", "container", ".", "persist", "import", "PersistStore", "import", "time", "if", "'origin...	45.208333	0.001805
def do_handshake(self): """Start the SSL handshake. This method only needs to be called if this transport was created with do_handshake_on_connect set to False (the default is True). The handshake needs to be synchronized between the both endpoints, so that SSL record level d...	[ "def", "do_handshake", "(", "self", ")", ":", "if", "self", ".", "_error", ":", "raise", "compat", ".", "saved_exc", "(", "self", ".", "_error", ")", "elif", "self", ".", "_closing", "or", "self", ".", "_handle", ".", "closed", ":", "raise", "Transport...	44.944444	0.002421
def control(self, instances, action): """Valid actions: start, stop, reboot, terminate, protect, and unprotect. """ if not isinstance(instances, list) and\ not isinstance(instances, tuple): instances = [instances] actions = {'start': {'operation': "StartIns...	[ "def", "control", "(", "self", ",", "instances", ",", "action", ")", ":", "if", "not", "isinstance", "(", "instances", ",", "list", ")", "and", "not", "isinstance", "(", "instances", ",", "tuple", ")", ":", "instances", "=", "[", "instances", "]", "act...	52.878788	0.001125
def get(self, block=True, timeout=None): """get an item out of the queue .. note:: if `block` is ``True`` (the default) and the queue is :meth`empty`, this method will block the current coroutine until something has been :meth:`put`. :param block: ...	[ "def", "get", "(", "self", ",", "block", "=", "True", ",", "timeout", "=", "None", ")", ":", "if", "not", "self", ".", "_data", ":", "if", "not", "block", ":", "raise", "Empty", "(", ")", "current", "=", "compat", ".", "getcurrent", "(", ")", "wa...	33.617021	0.00123
def get_page(self, rel_url, include_draft=False): """ Get custom page for given relative url from filesystem. Possible input: - my-page/ - my-page/index.html - my-another-page.html - a/b/c/ - a/b/c/d.html :param rel_url: relative url :par...	[ "def", "get_page", "(", "self", ",", "rel_url", ",", "include_draft", "=", "False", ")", ":", "page_dir", "=", "os", ".", "path", ".", "dirname", "(", "rel_url", ".", "replace", "(", "'/'", ",", "os", ".", "path", ".", "sep", ")", ")", "page_path", ...	36.97619	0.001255
def _setPWMFrequency(self, pwm, device, message): """ Set the PWM frequency. :Parameters: pwm : `int` The PWN frequency to set in hertz. device : `int` The device is the integer number of the hardware devices ID and is only used with the P...	[ "def", "_setPWMFrequency", "(", "self", ",", "pwm", ",", "device", ",", "message", ")", ":", "value", "=", "self", ".", "_CONFIG_PWM_TO_VALUE", ".", "get", "(", "pwm", ")", "if", "value", "is", "None", ":", "msg", "=", "\"Invalid frequency: {}\"", ".", "...	35.153846	0.00213
def vector_to_symmetric(v): '''Convert an iterable into a symmetric matrix.''' np = len(v) N = (int(sqrt(1 + 8np)) - 1)//2 if N(N+1)//2 != np: raise ValueError('Cannot convert vector to symmetric matrix') sym = ndarray((N,N)) iterable = iter(v) for r in range(N): f...	[ "def", "vector_to_symmetric", "(", "v", ")", ":", "np", "=", "len", "(", "v", ")", "N", "=", "(", "int", "(", "sqrt", "(", "1", "+", "8", "", "np", ")", ")", "-", "1", ")", "//", "2", "if", "N", "", "(", "N", "+", "1", ")", "//", "2",...	32.916667	0.009852
def json_loads(inbox): """ Deserializes the first element of the input using the JSON protocol as implemented by the ``json`` Python 2.6 library. """ gc.disable() obj = json.loads(inbox[0]) gc.enable() return obj	[ "def", "json_loads", "(", "inbox", ")", ":", "gc", ".", "disable", "(", ")", "obj", "=", "json", ".", "loads", "(", "inbox", "[", "0", "]", ")", "gc", ".", "enable", "(", ")", "return", "obj" ]	24.1	0.012
def _count_devices(self): """See what Windows' GetRawInputDeviceList wants to tell us. For now, we are just seeing if there is at least one keyboard and/or mouse attached. GetRawInputDeviceList could be used to help distinguish between different keyboards and mice on the system...	[ "def", "_count_devices", "(", "self", ")", ":", "number_of_devices", "=", "ctypes", ".", "c_uint", "(", ")", "if", "ctypes", ".", "windll", ".", "user32", ".", "GetRawInputDeviceList", "(", "ctypes", ".", "POINTER", "(", "ctypes", ".", "c_int", ")", "(", ...	39.404762	0.001179
def _setuie(self, i): """Initialise bitstring with unsigned interleaved exponential-Golomb code for integer i. Raises CreationError if i < 0. """ if i < 0: raise CreationError("Cannot use negative initialiser for unsigned " "interleaved expon...	[ "def", "_setuie", "(", "self", ",", "i", ")", ":", "if", "i", "<", "0", ":", "raise", "CreationError", "(", "\"Cannot use negative initialiser for unsigned \"", "\"interleaved exponential-Golomb.\"", ")", "self", ".", "_setbin_unsafe", "(", "'1'", "if", "i", "==",...	41.2	0.009501
def restore(name): """Restores the database from a snapshot""" app = get_app() if not name: snapshot = app.get_latest_snapshot() if not snapshot: click.echo( "Couldn't find any snapshots for project %s" % load_config()['project_name'] ...	[ "def", "restore", "(", "name", ")", ":", "app", "=", "get_app", "(", ")", "if", "not", "name", ":", "snapshot", "=", "app", ".", "get_latest_snapshot", "(", ")", "if", "not", "snapshot", ":", "click", ".", "echo", "(", "\"Couldn't find any snapshots for pr...	31.121951	0.00076
def filter_dirs(root, dirs, excl_paths): """Filter directory paths based on the exclusion rules defined in 'excl_paths'. """ filtered_dirs = [] for dirpath in dirs: abspath = os.path.abspath(os.path.join(root, dirpath)) if os.path.basename(abspath) in _SKIP_DIRS: continue...	[ "def", "filter_dirs", "(", "root", ",", "dirs", ",", "excl_paths", ")", ":", "filtered_dirs", "=", "[", "]", "for", "dirpath", "in", "dirs", ":", "abspath", "=", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "join", "(", "root", "...	34.5	0.002353
def run(self, cmd, sudo=False, ignore_error=False, success_status=(0,), error_callback=None, custom_log=None, retry=0): """Run a command on the remote host. The command is run on the remote host, if there is a redirected host then the command will be run on that redirected host. See...	[ "def", "run", "(", "self", ",", "cmd", ",", "sudo", "=", "False", ",", "ignore_error", "=", "False", ",", "success_status", "=", "(", "0", ",", ")", ",", "error_callback", "=", "None", ",", "custom_log", "=", "None", ",", "retry", "=", "0", ")", ":...	42.610169	0.001944
def readconf(conffile, section_name=None, log_name=None, defaults=None, raw=False): """ Read config file and return config items as a dict :param conffile: path to config file, or a file-like object (hasattr readline) :param section_name: config section to read (will r...	[ "def", "readconf", "(", "conffile", ",", "section_name", "=", "None", ",", "log_name", "=", "None", ",", "defaults", "=", "None", ",", "raw", "=", "False", ")", ":", "if", "defaults", "is", "None", ":", "defaults", "=", "{", "}", "if", "raw", ":", ...	33.934783	0.001868
def _urlunquote(byte_string, remap=None, preserve=None): """ Unquotes a URI portion from a byte string into unicode using UTF-8 :param byte_string: A byte string of the data to unquote :param remap: A list of characters (as unicode) that should be re-mapped to a %XX encoding. T...	[ "def", "_urlunquote", "(", "byte_string", ",", "remap", "=", "None", ",", "preserve", "=", "None", ")", ":", "if", "byte_string", "is", "None", ":", "return", "byte_string", "if", "byte_string", "==", "b''", ":", "return", "''", "if", "preserve", ":", "r...	29.489362	0.002095
def crtGauss2D(varSizeX, varSizeY, varPosX, varPosY, varSd): """Create 2D Gaussian kernel. Parameters ---------- varSizeX : int, positive Width of the visual field. varSizeY : int, positive Height of the visual field.. varPosX : int, positive X position of centre of 2D G...	[ "def", "crtGauss2D", "(", "varSizeX", ",", "varSizeY", ",", "varPosX", ",", "varPosY", ",", "varSd", ")", ":", "varSizeX", "=", "int", "(", "varSizeX", ")", "varSizeY", "=", "int", "(", "varSizeY", ")", "# aryX and aryY are in reversed order, this seems to be nece...	27.526316	0.000923
def enable(self): """ Enables WinPair settings """ npair = self.npair.value() for label, xsl, xsr, ys, nx, ny in \ zip(self.label[:npair], self.xsl[:npair], self.xsr[:npair], self.ys[:npair], self.nx[:npair], self.ny[:npair]): label...	[ "def", "enable", "(", "self", ")", ":", "npair", "=", "self", ".", "npair", ".", "value", "(", ")", "for", "label", ",", "xsl", ",", "xsr", ",", "ys", ",", "nx", ",", "ny", "in", "zip", "(", "self", ".", "label", "[", ":", "npair", "]", ",", ...	31.413793	0.00213
def get_by_id_or_404(self, id, kwargs): """Gets by a instance instance r raises a 404 is one isn't found.""" obj = self.get_by_id(id=id, kwargs) if obj: return obj raise Http404	[ "def", "get_by_id_or_404", "(", "self", ",", "id", ",", "", "", "kwargs", ")", ":", "obj", "=", "self", ".", "get_by_id", "(", "id", "=", "id", ",", "", "", "kwargs", ")", "if", "obj", ":", "return", "obj", "raise", "Http404" ]	27.5	0.008811
def to_gds(self, multiplier): """ Convert this object to a GDSII element. Parameters ---------- multiplier : number A number that multiplies all dimensions written in the GDSII element. Returns ------- out : string The...	[ "def", "to_gds", "(", "self", ",", "multiplier", ")", ":", "name", "=", "self", ".", "ref_cell", ".", "name", "if", "len", "(", "name", ")", "%", "2", "!=", "0", ":", "name", "=", "name", "+", "'\\0'", "data", "=", "struct", ".", "pack", "(", "...	43.206349	0.001437
def sqs(self): """ :rtype: SQSConnection """ if self.__sqs is None: self.__sqs = self.__aws_connect(sqs) return self.__sqs	[ "def", "sqs", "(", "self", ")", ":", "if", "self", ".", "__sqs", "is", "None", ":", "self", ".", "__sqs", "=", "self", ".", "__aws_connect", "(", "sqs", ")", "return", "self", ".", "__sqs" ]	24	0.011494
def add_conditional_state(self, name, state, validator, class_validator=None, cache_for=None, label=None): """ Add a conditional state that combines an existing state with a validator that must also pass. The validator receives the object on which the property is present as a parameter. ...	[ "def", "add_conditional_state", "(", "self", ",", "name", ",", "state", ",", "validator", ",", "class_validator", "=", "None", ",", "cache_for", "=", "None", ",", "label", "=", "None", ")", ":", "# We'll accept a ManagedState with grouped values, but not a ManagedStat...	62.466667	0.008933
def point(self, x, y, z=0, m=0): """Creates a point shape.""" pointShape = _Shape(self.shapeType) pointShape.points.append([x, y, z, m]) self._shapes.append(pointShape)	[ "def", "point", "(", "self", ",", "x", ",", "y", ",", "z", "=", "0", ",", "m", "=", "0", ")", ":", "pointShape", "=", "_Shape", "(", "self", ".", "shapeType", ")", "pointShape", ".", "points", ".", "append", "(", "[", "x", ",", "y", ",", "z",...	40	0.009804
def get_api_publisher(self, social_user): """ and other https://vk.com/dev.php?method=wall.post """ def _post(**kwargs): api = self.get_api(social_user) from pudb import set_trace; set_trace() # api.group.getInfo('uids'='your_group_id', 'fields'='...	[ "def", "get_api_publisher", "(", "self", ",", "social_user", ")", ":", "def", "_post", "(", "", "", "kwargs", ")", ":", "api", "=", "self", ".", "get_api", "(", "social_user", ")", "from", "pudb", "import", "set_trace", "set_trace", "(", ")", "# api.gr...	32.384615	0.011547
def _shorten_line_at_tokens_new(tokens, source, indentation, max_line_length): """Shorten the line taking its length into account. The input is expected to be free of newlines except for inside multiline strings and at the end. """ # Yield the original source so to ...	[ "def", "_shorten_line_at_tokens_new", "(", "tokens", ",", "source", ",", "indentation", ",", "max_line_length", ")", ":", "# Yield the original source so to see if it's a better choice than the", "# shortened candidate lines we generate here.", "yield", "indentation", "+", "source"...	41.461538	0.000907
def f2tc(f,base=25): """Converts frames to timecode""" try: f = int(f) except: return "--:--:--:--" hh = int((f / base) / 3600) mm = int(((f / base) / 60) - (hh60)) ss = int((f/base) - (hh3600) - (mm60)) ff = int(f - (hh3600base) - (mm60base) - (ssbase)) return "{...	[ "def", "f2tc", "(", "f", ",", "base", "=", "25", ")", ":", "try", ":", "f", "=", "int", "(", "f", ")", "except", ":", "return", "\"--:--:--:--\"", "hh", "=", "int", "(", "(", "f", "/", "base", ")", "/", "3600", ")", "mm", "=", "int", "(", "...	32.727273	0.008108
def create_attributes(klass, attributes, previous_object=None): """ Attributes for resource creation. """ result = {} if previous_object is not None: result = {k: v for k, v in previous_object.to_json().items() if k != 'sys'} result.update(attributes) ...	[ "def", "create_attributes", "(", "klass", ",", "attributes", ",", "previous_object", "=", "None", ")", ":", "result", "=", "{", "}", "if", "previous_object", "is", "not", "None", ":", "result", "=", "{", "k", ":", "v", "for", "k", ",", "v", "in", "pr...	25	0.008902
def _parse_operation_bytes(unpacker): """Returns a protobuf message representing the next operation as read from the byte stream in unpacker """ # Check for and parse optional source account field source_account = None if unpacker.unpack_bool(): source_account = unpacker.unpack_fopaque(...	[ "def", "_parse_operation_bytes", "(", "unpacker", ")", ":", "# Check for and parse optional source account field", "source_account", "=", "None", "if", "unpacker", ".", "unpack_bool", "(", ")", ":", "source_account", "=", "unpacker", ".", "unpack_fopaque", "(", "32", ...	31.930818	0.000573
def _initialize_precalculated_series(self, asset, trading_calendar, trading_days, data_portal): """ Internal method that pre-calculates the ...	[ "def", "_initialize_precalculated_series", "(", "self", ",", "asset", ",", "trading_calendar", ",", "trading_days", ",", "data_portal", ")", ":", "if", "self", ".", "emission_rate", "==", "\"minute\"", ":", "minutes", "=", "trading_calendar", ".", "minutes_for_sessi...	35.162393	0.001418
def send_rally_points(self): '''send rally points from rallyloader''' self.mav_param.mavset(self.master,'RALLY_TOTAL',self.rallyloader.rally_count(),3) for i in range(self.rallyloader.rally_count()): self.send_rally_point(i)	[ "def", "send_rally_points", "(", "self", ")", ":", "self", ".", "mav_param", ".", "mavset", "(", "self", ".", "master", ",", "'RALLY_TOTAL'", ",", "self", ".", "rallyloader", ".", "rally_count", "(", ")", ",", "3", ")", "for", "i", "in", "range", "(", ...	42.666667	0.022989
def rectify(self, slitlet2d, resampling, inverse=False): """Rectify slitlet using computed transformation. Parameters ---------- slitlet2d : numpy array Image containing the 2d slitlet image. resampling : int 1: nearest neighbour, 2: flux preserving inter...	[ "def", "rectify", "(", "self", ",", "slitlet2d", ",", "resampling", ",", "inverse", "=", "False", ")", ":", "if", "resampling", "not", "in", "[", "1", ",", "2", "]", ":", "raise", "ValueError", "(", "\"Unexpected resampling value=\"", "+", "str", "(", "r...	29.192308	0.001275
def removedIssuesEstimateSum(self, board_id, sprint_id): """Return the total incompleted points this sprint.""" return self._get_json('rapid/charts/sprintreport?rapidViewId=%s&sprintId=%s' % (board_id, sprint_id), base=self.AGILE_BASE_URL)['contents']['puntedIssuesEstimateS...	[ "def", "removedIssuesEstimateSum", "(", "self", ",", "board_id", ",", "sprint_id", ")", ":", "return", "self", ".", "_get_json", "(", "'rapid/charts/sprintreport?rapidViewId=%s&sprintId=%s'", "%", "(", "board_id", ",", "sprint_id", ")", ",", "base", "=", "self", "...	82.5	0.012012
def dockerCheckOutput(args, *kwargs): """ Deprecated. Runs subprocessDockerCall() using 'subprocess.check_output()'. Provided for backwards compatibility with a previous implementation that used 'subprocess.check_output()'. This has since been supplanted and apiDockerCall() is recommended. ...	[ "def", "dockerCheckOutput", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "logger", ".", "warn", "(", "\"WARNING: dockerCheckOutput() using subprocess.check_output() \"", "\"is deprecated, please switch to apiDockerCall().\"", ")", "return", "subprocessDockerCall", "("...	48	0.001859
def xmlrpc_method(**kwargs): """ Support multiple endpoints serving the same views by chaining calls to xmlrpc_method """ # Add some default arguments kwargs.update( require_csrf=False, require_methods=["POST"], decorator=(submit_xmlrpc_metrics(method=kwargs["method"]),),...	[ "def", "xmlrpc_method", "(", "", "", "kwargs", ")", ":", "# Add some default arguments", "kwargs", ".", "update", "(", "require_csrf", "=", "False", ",", "require_methods", "=", "[", "\"POST\"", "]", ",", "decorator", "=", "(", "submit_xmlrpc_metrics", "(", ...	30.7	0.00158
def get_memcached_usage(socket=None): """ Returns memcached statistics. :param socket: Path to memcached's socket file. """ cmd = 'echo \'stats\' \| nc -U {0}'.format(socket) output = getoutput(cmd) curr_items = None bytes_ = None rows = output.split('\n')[:-1] for row in rows:...	[ "def", "get_memcached_usage", "(", "socket", "=", "None", ")", ":", "cmd", "=", "'echo \\'stats\\' \| nc -U {0}'", ".", "format", "(", "socket", ")", "output", "=", "getoutput", "(", "cmd", ")", "curr_items", "=", "None", "bytes_", "=", "None", "rows", "=", ...	24.7	0.001949
def read_header(self): """Read the header from `file`. The header is also stored in the `header` attribute. Returns ------- header : `OrderedDict` Header from `file`, stored in an ordered dictionary, where each entry has the following form:: ...	[ "def", "read_header", "(", "self", ")", ":", "# Read all fields except data. We use an OrderedDict such that", "# the order is the same as in `header_fields`. This makes it simple", "# to write later on in the correct order, based only on `header`.", "header", "=", "OrderedDict", "(", ")",...	39.170455	0.000566
def write_file(spdx_file, out): """ Write a file fields to out. """ out.write('# File\n\n') write_value('FileName', spdx_file.name, out) write_value('SPDXID', spdx_file.spdx_id, out) if spdx_file.has_optional_field('type'): write_file_type(spdx_file.type, out) write_value('FileCh...	[ "def", "write_file", "(", "spdx_file", ",", "out", ")", ":", "out", ".", "write", "(", "'# File\\n\\n'", ")", "write_value", "(", "'FileName'", ",", "spdx_file", ".", "name", ",", "out", ")", "write_value", "(", "'SPDXID'", ",", "spdx_file", ".", "spdx_id"...	39.816327	0.001501
def rpc(rtype=None): """Decorator marks a method for export. :param type: Specifies which :py:class:`Type` this method will return. The return type (rtype) must be one of: - An instance of :py:class:`p4p.Type` - None, in which case the method must return a :py:class:`p4p.Value` - One of the N...	[ "def", "rpc", "(", "rtype", "=", "None", ")", ":", "wrap", "=", "None", "if", "rtype", "is", "None", "or", "isinstance", "(", "rtype", ",", "Type", ")", ":", "pass", "elif", "isinstance", "(", "type", ",", "(", "list", ",", "tuple", ")", ")", ":"...	31.511628	0.002147
def cleanup_sessions(self, app=None): """Removes all expired session from the store. Periodically, this function can be called to remove sessions from the backend store that have expired, as they are not removed automatically unless the backend supports time-to-live and has been ...	[ "def", "cleanup_sessions", "(", "self", ",", "app", "=", "None", ")", ":", "if", "not", "app", ":", "app", "=", "current_app", "for", "key", "in", "app", ".", "kvsession_store", ".", "keys", "(", ")", ":", "m", "=", "self", ".", "key_regex", ".", "...	40.758621	0.001653
def step( self ): """ Returns the step value for this ruler. If the cached value is None, then a default value will be specified based on the ruler type. :return <variant> """ if ( self._step is not None ): return self._step eli...	[ "def", "step", "(", "self", ")", ":", "if", "(", "self", ".", "_step", "is", "not", "None", ")", ":", "return", "self", ".", "_step", "elif", "(", "self", ".", "rulerType", "(", ")", "==", "XChartRuler", ".", "Type", ".", "Number", ")", ":", "sel...	38.045455	0.022145
def _update_throughput(self, tablename, read, write, index): """ Update the throughput on a table or index """ def get_desc(): """ Get the table or global index description """ desc = self.describe(tablename, refresh=True, require=True) if index is not None: ...	[ "def", "_update_throughput", "(", "self", ",", "tablename", ",", "read", ",", "write", ",", "index", ")", ":", "def", "get_desc", "(", ")", ":", "\"\"\" Get the table or global index description \"\"\"", "desc", "=", "self", ".", "describe", "(", "tablename", ",...	33.294118	0.001717
def _setup_trunk(self, trunk, vlan_id=None): """Sets up VLAN trunk and updates the trunk status.""" LOG.info('Binding trunk port: %s.', trunk) try: # bind sub_ports to host. self._trunk_rpc.update_subport_bindings(self._context, ...	[ "def", "_setup_trunk", "(", "self", ",", "trunk", ",", "vlan_id", "=", "None", ")", ":", "LOG", ".", "info", "(", "'Binding trunk port: %s.'", ",", "trunk", ")", "try", ":", "# bind sub_ports to host.", "self", ".", "_trunk_rpc", ".", "update_subport_bindings", ...	47	0.002195
def _perform_async_update_rule(context, id, db_sg_group, rule_id, action): """Updates a SG rule async and return the job information. Only happens if the security group has associated ports. If the async connection fails the update continues (legacy mode). """ rpc_reply = None sg_rpc = sg_rpc_a...	[ "def", "_perform_async_update_rule", "(", "context", ",", "id", ",", "db_sg_group", ",", "rule_id", ",", "action", ")", ":", "rpc_reply", "=", "None", "sg_rpc", "=", "sg_rpc_api", ".", "QuarkSGAsyncProcessClient", "(", ")", "ports", "=", "db_api", ".", "sg_gat...	43.625	0.001403
def resize(self, shape, format=None, internalformat=None): """Set the texture size and format Parameters ---------- shape : tuple of integers New texture shape in zyx order. Optionally, an extra dimention may be specified to indicate the number of color channels....	[ "def", "resize", "(", "self", ",", "shape", ",", "format", "=", "None", ",", "internalformat", "=", "None", ")", ":", "return", "self", ".", "_resize", "(", "shape", ",", "format", ",", "internalformat", ")" ]	52	0.001642
def run_bidirectional_blast(reference, other_genome, dbtype, outdir=''): """BLAST a genome against another, and vice versa. This function requires BLAST to be installed, do so by running: sudo apt install ncbi-blast+ Args: reference (str): path to "reference" genome, aka your "base strain" ...	[ "def", "run_bidirectional_blast", "(", "reference", ",", "other_genome", ",", "dbtype", ",", "outdir", "=", "''", ")", ":", "# TODO: add force_rerun option", "if", "dbtype", "==", "'nucl'", ":", "command", "=", "'blastn'", "elif", "dbtype", "==", "'prot'", ":", ...	40.241935	0.001565
def main(): """ Reports stats on the workflow, use with --stats option to toil. """ parser = getBasicOptionParser() initializeOptions(parser) options = parseBasicOptions(parser) checkOptions(options, parser) config = Config() config.setOptions(options) jobStore = Toil.resumeJobStore(...	[ "def", "main", "(", ")", ":", "parser", "=", "getBasicOptionParser", "(", ")", "initializeOptions", "(", "parser", ")", "options", "=", "parseBasicOptions", "(", "parser", ")", "checkOptions", "(", "options", ",", "parser", ")", "config", "=", "Config", "(",...	35.076923	0.002137
def readObject(self): """read object""" try: _, res = self._read_and_exec_opcode(ident=0) position_bak = self.object_stream.tell() the_rest = self.object_stream.read() if len(the_rest): log_error("Warning!!!!: Stream still has %s bytes left.\ Enable debug mode of logging to see ...	[ "def", "readObject", "(", "self", ")", ":", "try", ":", "_", ",", "res", "=", "self", ".", "_read_and_exec_opcode", "(", "ident", "=", "0", ")", "position_bak", "=", "self", ".", "object_stream", ".", "tell", "(", ")", "the_rest", "=", "self", ".", "...	30.473684	0.01675
def add(self, score, user, ip_address, cookies={}, commit=True): """add(score, user, ip_address) Used to add a rating to an object.""" try: score = int(score) except (ValueError, TypeError): raise InvalidRating("%s is not a valid choice for %s" % (score, ...	[ "def", "add", "(", "self", ",", "score", ",", "user", ",", "ip_address", ",", "cookies", "=", "{", "}", ",", "commit", "=", "True", ")", ":", "try", ":", "score", "=", "int", "(", "score", ")", "except", "(", "ValueError", ",", "TypeError", ")", ...	40.319672	0.012897
def fromlist(items, accessor=None, keys=None, dims=None, dtype=None, labels=None, npartitions=None, engine=None): """ Load images from a list of items using the given accessor. Parameters ---------- accessor : function Apply to each item from the list to yield an image. keys : list, op...	[ "def", "fromlist", "(", "items", ",", "accessor", "=", "None", ",", "keys", "=", "None", ",", "dims", "=", "None", ",", "dtype", "=", "None", ",", "labels", "=", "None", ",", "npartitions", "=", "None", ",", "engine", "=", "None", ")", ":", "if", ...	33.410256	0.002237
def visit_member(self, attribute_key, attribute, member_node, member_data, is_link_node, parent_data, index=None): """ Visits a member node in a resource data tree. :param tuple attribute_key: tuple containing the attribute tokens identifying the member node's pos...	[ "def", "visit_member", "(", "self", ",", "attribute_key", ",", "attribute", ",", "member_node", ",", "member_data", ",", "is_link_node", ",", "parent_data", ",", "index", "=", "None", ")", ":", "raise", "NotImplementedError", "(", "'Abstract method.'", ")" ]	59.5	0.002068
def flow_removed_handler(self, evt): """FlowRemoved event handler. when the removed flow entry was for LACP, set the status of the slave i/f to disabled, and send a event.""" msg = evt.msg datapath = msg.datapath ofproto = datapath.ofproto dpid = datapath.id ...	[ "def", "flow_removed_handler", "(", "self", ",", "evt", ")", ":", "msg", "=", "evt", ".", "msg", "datapath", "=", "msg", ".", "datapath", "ofproto", "=", "datapath", ".", "ofproto", "dpid", "=", "datapath", ".", "id", "match", "=", "msg", ".", "match",...	38.375	0.002119
def all_synsets(self): ''' A generator over all the synsets in the GermaNet database. ''' for synset_dict in self._mongo_db.synsets.find(): yield Synset(self, synset_dict)	[ "def", "all_synsets", "(", "self", ")", ":", "for", "synset_dict", "in", "self", ".", "_mongo_db", ".", "synsets", ".", "find", "(", ")", ":", "yield", "Synset", "(", "self", ",", "synset_dict", ")" ]	35	0.009302
def checkout(self, ref, branch=None): """Do a git checkout of `ref`.""" return git_checkout(self.repo_dir, ref, branch=branch)	[ "def", "checkout", "(", "self", ",", "ref", ",", "branch", "=", "None", ")", ":", "return", "git_checkout", "(", "self", ".", "repo_dir", ",", "ref", ",", "branch", "=", "branch", ")" ]	46.666667	0.014085
def after_this_request(func: Callable) -> Callable: """Schedule the func to be called after the current request. This is useful in situations whereby you want an after request function for a specific route or circumstance only, for example, .. code-block:: python def index(): @aft...	[ "def", "after_this_request", "(", "func", ":", "Callable", ")", "->", "Callable", ":", "_request_ctx_stack", ".", "top", ".", "_after_request_functions", ".", "append", "(", "func", ")", "return", "func" ]	30.555556	0.001764
def preprocess_data(): """ Get the Enron e-mails from disk. Represent them as bag-of-words. Shuffle and split train/test. """ print("Importing dataset from disk...") path = 'enron1/ham/' ham1 = [open(path + f, 'r', errors='replace').read().strip(r"\n") for f in os.listdir(pa...	[ "def", "preprocess_data", "(", ")", ":", "print", "(", "\"Importing dataset from disk...\"", ")", "path", "=", "'enron1/ham/'", "ham1", "=", "[", "open", "(", "path", "+", "f", ",", "'r'", ",", "errors", "=", "'replace'", ")", ".", "read", "(", ")", ".",...	35.652174	0.000593
def XML(uri, tc, ps, keywords): '''Resolve a URI and return its content as an XML DOM. ''' source = urllib.urlopen(uri, keywords) enc = source.info().getencoding() if enc in ['7bit', '8bit', 'binary']: data = source else: data = StringIO.StringIO() mimetools.decode(so...	[ "def", "XML", "(", "uri", ",", "tc", ",", "ps", ",", "", "", "keywords", ")", ":", "source", "=", "urllib", ".", "urlopen", "(", "uri", ",", "", "", "keywords", ")", "enc", "=", "source", ".", "info", "(", ")", ".", "getencoding", "(", ")",...	32.615385	0.002294
def has_role_collective(self, identifiers, role_s, logical_operator): """ :param identifiers: a collection of identifiers :type identifiers: subject_abcs.IdentifierCollection :param role_s: a collection of 1..N Role identifiers :type role_s: Set of String(s) :param log...	[ "def", "has_role_collective", "(", "self", ",", "identifiers", ",", "role_s", ",", "logical_operator", ")", ":", "self", ".", "assert_realms_configured", "(", ")", "# interim_results is a set of tuples:", "interim_results", "=", "self", ".", "has_role", "(", "identifi...	36.088235	0.001587
def to_text(string, encoding="utf-8", errors=None): """Force a value to a text-type. :param string: Some input that can be converted to a unicode representation. :type string: str or bytes unicode :param encoding: The encoding to use for conversions, defaults to "utf-8" :param encoding: str, option...	[ "def", "to_text", "(", "string", ",", "encoding", "=", "\"utf-8\"", ",", "errors", "=", "None", ")", ":", "unicode_name", "=", "get_canonical_encoding_name", "(", "\"utf-8\"", ")", "if", "not", "errors", ":", "if", "get_canonical_encoding_name", "(", "encoding",...	38.105263	0.001347
def send(self, diff): """ Write the diff (toVol from fromVol) to the stream context manager. """ if not self.dryrun: self._fileSystemSync() return self.butter.send( self.getSendPath(diff.toVol), self.getSendPath(diff.fromVol), diff, se...	[ "def", "send", "(", "self", ",", "diff", ")", ":", "if", "not", "self", ".", "dryrun", ":", "self", ".", "_fileSystemSync", "(", ")", "return", "self", ".", "butter", ".", "send", "(", "self", ".", "getSendPath", "(", "diff", ".", "toVol", ")", ","...	31.272727	0.008475
def get_version(): """Obtain InaSAFE's version from version file. :returns: The current version number. :rtype: str """ # Get location of application wide version info root_dir = os.path.abspath(os.path.join(os.path.dirname(__file__))) version_file = os.path.join(root_dir, 'safe', 'definit...	[ "def", "get_version", "(", ")", ":", "# Get location of application wide version info", "root_dir", "=", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "join", "(", "os", ".", "path", ".", "dirname", "(", "__file__", ")", ")", ")", "versio...	31.681818	0.001393
def authorization_header(oauth_params): """Return Authorization header""" authorization_headers = 'OAuth realm="",' authorization_headers += ','.join(['{0}="{1}"'.format(k, urllib.quote(str(v))) for k, v in oauth_params.items()]) return authorization_headers	[ "def", "authorization_header", "(", "oauth_params", ")", ":", "authorization_headers", "=", "'OAuth realm=\"\",'", "authorization_headers", "+=", "','", ".", "join", "(", "[", "'{0}=\"{1}\"'", ".", "format", "(", "k", ",", "urllib", ".", "quote", "(", "str", "("...	49.5	0.013245
def fit(self, data, debug=False): """ Fit the model to data and store/return the results. Parameters ---------- data : pandas.DataFrame Data to use for fitting the model. Must contain all the columns referenced by the `model_expression`. debug : b...	[ "def", "fit", "(", "self", ",", "data", ",", "debug", "=", "False", ")", ":", "with", "log_start_finish", "(", "'fitting model {}'", ".", "format", "(", "self", ".", "name", ")", ",", "logger", ")", ":", "fit", "=", "fit_model", "(", "data", ",", "se...	39.473684	0.001301
def _get_map_from_user_by_id(self, user, map_id): """ Get a mapfile owned by a user from the database by map_id. """ req = Session.query(Map).select_from(join(Map, User)) try: return req.filter(and_(User.login==user, Map.id==map_id)).one() except Exception, e: ...	[ "def", "_get_map_from_user_by_id", "(", "self", ",", "user", ",", "map_id", ")", ":", "req", "=", "Session", ".", "query", "(", "Map", ")", ".", "select_from", "(", "join", "(", "Map", ",", "User", ")", ")", "try", ":", "return", "req", ".", "filter"...	41.625	0.011765
def getAssociationFilename(self, server_url, handle): """Create a unique filename for a given server url and handle. This implementation does not assume anything about the format of the handle. The filename that is returned will contain the domain name from the server URL for ease of hum...	[ "def", "getAssociationFilename", "(", "self", ",", "server_url", ",", "handle", ")", ":", "if", "server_url", ".", "find", "(", "'://'", ")", "==", "-", "1", ":", "raise", "ValueError", "(", "'Bad server URL: %r'", "%", "server_url", ")", "proto", ",", "re...	37.869565	0.00224
def _get(self, url, method, host): """Get a request handler based on the URL of the request, or raises an error. Internal method for caching. :param url: request URL :param method: request method :return: handler, arguments, keyword arguments """ url = host + ur...	[ "def", "_get", "(", "self", ",", "url", ",", "method", ",", "host", ")", ":", "url", "=", "host", "+", "url", "# Check against known static routes", "route", "=", "self", ".", "routes_static", ".", "get", "(", "url", ")", "method_not_supported", "=", "self...	42.204082	0.000945
def F(Document, __raw__=None, **filters): """Generate a MongoDB filter document through parameter interpolation. Arguments passed by name have their name interpreted as an optional prefix (currently only `not`), a double- underscore Because this utility is likely going to be used frequently it has been given a ...	[ "def", "F", "(", "Document", ",", "__raw__", "=", "None", ",", "", "", "filters", ")", ":", "ops", "=", "Filter", "(", "__raw__", ")", "args", "=", "_process_arguments", "(", "Document", ",", "FILTER_PREFIX_MAP", ",", "FILTER_OPERATION_MAP", ",", "filter...	26.333333	0.051908
def https_policy_from_config(config): """ Create an ``IPolicyForHTTPS`` which can authenticate a Kubernetes API server. :param KubeConfig config: A Kubernetes configuration containing an active context identifying a cluster. The resulting ``IPolicyForHTTPS`` will authenticate the API s...	[ "def", "https_policy_from_config", "(", "config", ")", ":", "server", "=", "config", ".", "cluster", "[", "\"server\"", "]", "base_url", "=", "URL", ".", "fromText", "(", "native_string_to_unicode", "(", "server", ")", ")", "ca_certs", "=", "pem", ".", "pars...	34.763158	0.000736
def symbol_pos(self, cursor, character_type=OPEN, symbol_type=PAREN): """ Find the corresponding symbol position (line, column) of the specified symbol. If symbol type is PAREN and character_type is OPEN, the function will look for '('. :param cursor: QTextCursor :param ...	[ "def", "symbol_pos", "(", "self", ",", "cursor", ",", "character_type", "=", "OPEN", ",", "symbol_type", "=", "PAREN", ")", ":", "retval", "=", "None", ",", "None", "original_cursor", "=", "self", ".", "editor", ".", "textCursor", "(", ")", "self", ".", ...	43.434783	0.001959
def intersect(self, start_point, end_point): """Intersect the line segment with the box return the first intersection point and normal vector pointing into space from the box side intersected. If the line does not intersect, or lies completely in one side of the box return...	[ "def", "intersect", "(", "self", ",", "start_point", ",", "end_point", ")", ":", "sx", ",", "sy", ",", "sz", "=", "start_point", "ex", ",", "ey", ",", "ez", "=", "end_point", "p1x", ",", "p1y", ",", "p1z", "=", "self", ".", "point1", "p2x", ",", ...	49.578125	0.002472
def _get_referenced_services(specs): """ Returns all services that are referenced in specs.apps.depends.services, or in specs.bundles.services """ active_services = set() for app_spec in specs['apps'].values(): for service in app_spec['depends']['services']: active_services.a...	[ "def", "_get_referenced_services", "(", "specs", ")", ":", "active_services", "=", "set", "(", ")", "for", "app_spec", "in", "specs", "[", "'apps'", "]", ".", "values", "(", ")", ":", "for", "service", "in", "app_spec", "[", "'depends'", "]", "[", "'serv...	37.307692	0.002012
def post(self, url: str, data: List[dict]) -> List[dict]: """ Gives data to database """ data.update({ 'key': self.api_key, }) response = requests.post( url, data = json.dumps(data), headers = {'Content-type': 'application/json'}, ...	[ "def", "post", "(", "self", ",", "url", ":", "str", ",", "data", ":", "List", "[", "dict", "]", ")", "->", "List", "[", "dict", "]", ":", "data", ".", "update", "(", "{", "'key'", ":", "self", ".", "api_key", ",", "}", ")", "response", "=", "...	35	0.019272
def generate_static(self, path): """ This method generates a valid path to the public folder of the running project """ if not path: return "" if path[0] == '/': return "%s?v=%s" % (path, self.version) return "%s/%s?v=%s" % (self.static, path, se...	[ "def", "generate_static", "(", "self", ",", "path", ")", ":", "if", "not", "path", ":", "return", "\"\"", "if", "path", "[", "0", "]", "==", "'/'", ":", "return", "\"%s?v=%s\"", "%", "(", "path", ",", "self", ".", "version", ")", "return", "\"%s/%s?v...	29.181818	0.009063
def leaf_bus(self, df=False): """ Return leaf bus idx, line idx, and the line foreign key Returns ------- (list, list, list) or DataFrame """ # leafs - leaf bus idx # lines - line idx # fkey - the foreign key of Line, in 'bus1' or 'bus2', linking...	[ "def", "leaf_bus", "(", "self", ",", "df", "=", "False", ")", ":", "# leafs - leaf bus idx", "# lines - line idx", "# fkey - the foreign key of Line, in 'bus1' or 'bus2', linking the bus", "leafs", ",", "lines", ",", "fkeys", "=", "list", "(", ")", ",", "list", "(", ...	29	0.001756
def register(self, settings_class=NoSwitcher, simple_checks, *conditions): """ Register a settings class with the switcher. Can be passed the settings class to register or be used as a decorator. :param settings_class: The class to register with the provided ...	[ "def", "register", "(", "self", ",", "settings_class", "=", "NoSwitcher", ",", "", "simple_checks", ",", "", "*", "conditions", ")", ":", "if", "settings_class", "is", "NoSwitcher", ":", "def", "decorator", "(", "cls", ")", ":", "self", ".", "register", ...	45.551724	0.002224
def plot_environments(self, isite, plot_type=None, title='Coordination numbers', max_dist=2.0, additional_condition=AC.ONLY_ACB, figsize=None, strategy=None): """ Plotting of the coordination numbers of a given site for all the distfactor/angfactor parameters. If the c...	[ "def", "plot_environments", "(", "self", ",", "isite", ",", "plot_type", "=", "None", ",", "title", "=", "'Coordination numbers'", ",", "max_dist", "=", "2.0", ",", "additional_condition", "=", "AC", ".", "ONLY_ACB", ",", "figsize", "=", "None", ",", "strate...	72.136364	0.008085
def table(self): """ 打印出account的内容 """ return pd.DataFrame([ self.message, ]).set_index( 'account_cookie', drop=False ).T	[ "def", "table", "(", "self", ")", ":", "return", "pd", ".", "DataFrame", "(", "[", "self", ".", "message", ",", "]", ")", ".", "set_index", "(", "'account_cookie'", ",", "drop", "=", "False", ")", ".", "T" ]	19.6	0.009756
def custom_except_hook(exc_info): """ A custom excepthook to present python errors produced by the CLI. We don't want to show end users big scary stacktraces if they aren't python programmers, so slim it down to some basic info. We keep a "DEBUGMODE" env variable kicking around to let us turn on sta...	[ "def", "custom_except_hook", "(", "exc_info", ")", ":", "exception_type", ",", "exception", ",", "traceback", "=", "exc_info", "# check if we're in debug mode, and run the real excepthook if we are", "ctx", "=", "click", ".", "get_current_context", "(", ")", "state", "=",...	43.319444	0.000313
def transform(self, X, lenscale=None): """ Apply the Fast Food RBF basis to X. Parameters ---------- X: ndarray (N, d) array of observations where N is the number of samples, and d is the dimensionality of X. lenscale: scalar or ndarray, optional ...	[ "def", "transform", "(", "self", ",", "X", ",", "lenscale", "=", "None", ")", ":", "lenscale", "=", "self", ".", "_check_dim", "(", "X", ".", "shape", "[", "1", "]", ",", "lenscale", ")", "VX", "=", "self", ".", "_makeVX", "(", "X", "/", "lenscal...	33.269231	0.002247
def remove(self, ids, **kwargs): """ Method to delete interface by id. :param ids: List containing identifiers of interfaces. """ url = build_uri_with_ids('api/v3/interface/%s/', ids) return super(ApiInterfaceRequest, self).delete(self.prepare_url(url, kwargs))	[ "def", "remove", "(", "self", ",", "ids", ",", "", "", "kwargs", ")", ":", "url", "=", "build_uri_with_ids", "(", "'api/v3/interface/%s/'", ",", "ids", ")", "return", "super", "(", "ApiInterfaceRequest", ",", "self", ")", ".", "delete", "(", "self", "....	37.875	0.009677
def nms(dets, thresh): """ greedily select boxes with high confidence and overlap with current maximum <= thresh rule out overlap >= thresh :param dets: [[x1, y1, x2, y2 score]] :param thresh: retain overlap < thresh :return: indexes to keep """ x1 = dets[:, 0] y1 = dets[:, 1] x2...	[ "def", "nms", "(", "dets", ",", "thresh", ")", ":", "x1", "=", "dets", "[", ":", ",", "0", "]", "y1", "=", "dets", "[", ":", ",", "1", "]", "x2", "=", "dets", "[", ":", ",", "2", "]", "y2", "=", "dets", "[", ":", ",", "3", "]", "scores"...	27.285714	0.002022
def getAttr(self, node, name, nsuri=None, default=join): """Return the value of the attribute named 'name' with the optional nsuri, or the default if one is specified. If nsuri is not specified, an attribute that matches the given name will be returned regardless of namespace.""...	[ "def", "getAttr", "(", "self", ",", "node", ",", "name", ",", "nsuri", "=", "None", ",", "default", "=", "join", ")", ":", "if", "nsuri", "is", "None", ":", "result", "=", "node", ".", "_attrs", ".", "get", "(", "name", ",", "None", ")", "if", ...	41.894737	0.002457
def connect(token, protocol=RtmProtocol, factory=WebSocketClientFactory, factory_kwargs=None, api_url=None, debug=False): """ Creates a new connection to the Slack Real-Time API. Returns (connection) which represents this connection to the API server. """ if factory_kwargs is None: factory_kwargs = dict() me...	[ "def", "connect", "(", "token", ",", "protocol", "=", "RtmProtocol", ",", "factory", "=", "WebSocketClientFactory", ",", "factory_kwargs", "=", "None", ",", "api_url", "=", "None", ",", "debug", "=", "False", ")", ":", "if", "factory_kwargs", "is", "None", ...	33.833333	0.027157
def _buildStartOpts(self, streamUrl, playList=False): """ Builds the options to pass to subprocess.""" #opts = [self.PLAYER_CMD, "-Irc", "--quiet", streamUrl] opts = [self.PLAYER_CMD, "-Irc", "-vv", streamUrl] return opts	[ "def", "_buildStartOpts", "(", "self", ",", "streamUrl", ",", "playList", "=", "False", ")", ":", "#opts = [self.PLAYER_CMD, \"-Irc\", \"--quiet\", streamUrl]", "opts", "=", "[", "self", ".", "PLAYER_CMD", ",", "\"-Irc\"", ",", "\"-vv\"", ",", "streamUrl", "]", "r...	49.8	0.011858
def cmp_res_R2(lstRat, lstNiiNames, strPathOut, strPathMdl, lgcSveMdlTc=True, lgcDel=False, strNmeExt=''): """"Compare results for different exponents and create winner nii. Parameters ---------- lstRat : list List of floats containing the ratios that were tested for surround ...	[ "def", "cmp_res_R2", "(", "lstRat", ",", "lstNiiNames", ",", "strPathOut", ",", "strPathMdl", ",", "lgcSveMdlTc", "=", "True", ",", "lgcDel", "=", "False", ",", "strNmeExt", "=", "''", ")", ":", "print", "(", "'---Compare results for different ratios'", ")", "...	46.550459	0.000482
def is_binary_file(file_obj): """ Returns True if file has non-ASCII characters (> 0x7F, or 127) Should work in both Python 2 and 3 """ start = file_obj.tell() fbytes = file_obj.read(1024) file_obj.seek(start) is_str = isinstance(fbytes, str) for fbyte in fbytes: if is_str: ...	[ "def", "is_binary_file", "(", "file_obj", ")", ":", "start", "=", "file_obj", ".", "tell", "(", ")", "fbytes", "=", "file_obj", ".", "read", "(", "1024", ")", "file_obj", ".", "seek", "(", "start", ")", "is_str", "=", "isinstance", "(", "fbytes", ",", ...	25.588235	0.002217
def clear_all(): """DANGER! This command is a maintenance tool and clears the complete database. """ sure = input("Are you sure to drop the complete database content? (Type " "in upppercase YES)") if not (sure == 'YES'): db_log('Not deleting the database.') sys.ex...	[ "def", "clear_all", "(", ")", ":", "sure", "=", "input", "(", "\"Are you sure to drop the complete database content? (Type \"", "\"in upppercase YES)\"", ")", "if", "not", "(", "sure", "==", "'YES'", ")", ":", "db_log", "(", "'Not deleting the database.'", ")", "sys",...	32.352941	0.001767
def calculate_cut_coords_by_zoom( coord, metatile_zoom, cfg_tile_sizes, max_zoom): """ Returns a map of nominal zoom to the list of cut coordinates at that nominal zoom. Note that max_zoom should be the maximum coordinate zoom, not nominal zoom. """ tile_sizes_by_zoom = calculate_s...	[ "def", "calculate_cut_coords_by_zoom", "(", "coord", ",", "metatile_zoom", ",", "cfg_tile_sizes", ",", "max_zoom", ")", ":", "tile_sizes_by_zoom", "=", "calculate_sizes_by_zoom", "(", "coord", ",", "metatile_zoom", ",", "cfg_tile_sizes", ",", "max_zoom", ")", "cut_coo...	31.913043	0.001323
def set_joint_mode(self, ids): """ Sets the specified motors to joint mode. """ self.set_control_mode(dict(zip(ids, itertools.repeat('joint'))))	[ "def", "set_joint_mode", "(", "self", ",", "ids", ")", ":", "self", ".", "set_control_mode", "(", "dict", "(", "zip", "(", "ids", ",", "itertools", ".", "repeat", "(", "'joint'", ")", ")", ")", ")" ]	52.666667	0.0125
def observe(cls, args, kwargs): """ Mark a method as receiving notifications. Comes in two flavours: .. method:: observe(name, *types) :noindex: A decorator living in the class. Can be applied more than once to the same method, provided the names differ. ...	[ "def", "observe", "(", "cls", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "@", "decorators", ".", "good_decorator", "def", "_decorator", "(", "_notified", ")", ":", "# marks the method with observed properties", "_list", "=", "getattr", "(", "_notifie...	39.326531	0.000506
def create_and_update_from_json_data(d, user): """ Create or update page based on python dict d loaded from JSON data. This applies all data except for redirect_to, which is done in a second pass after all pages have been imported, user is the User instance that will be used if the author can't ...	[ "def", "create_and_update_from_json_data", "(", "d", ",", "user", ")", ":", "page", "=", "None", "parent", "=", "None", "parent_required", "=", "True", "created", "=", "False", "messages", "=", "[", "]", "page_languages", "=", "set", "(", "lang", "[", "0",...	34.178571	0.002031
def _update_cache_stats(self, key, result): """ Update the cache stats. If no cache-result is specified, we iniitialize the key. Otherwise, we increment the correct cache-result. Note the behavior for expired. A client can be expired and the key still exists. ...	[ "def", "_update_cache_stats", "(", "self", ",", "key", ",", "result", ")", ":", "if", "result", "is", "None", ":", "self", ".", "_CACHE_STATS", "[", "'access_stats'", "]", ".", "setdefault", "(", "key", ",", "{", "'hit'", ":", "0", ",", "'miss'", ":", ...	37.333333	0.008711
def example_rgb_to_xyz(): """ The reverse is similar. """ print("=== RGB Example: RGB->XYZ ===") # Instantiate an Lab color object with the given values. rgb = sRGBColor(120, 130, 140) # Show a string representation. print(rgb) # Convert RGB to XYZ using a D50 illuminant. xyz = ...	[ "def", "example_rgb_to_xyz", "(", ")", ":", "print", "(", "\"=== RGB Example: RGB->XYZ ===\"", ")", "# Instantiate an Lab color object with the given values.", "rgb", "=", "sRGBColor", "(", "120", ",", "130", ",", "140", ")", "# Show a string representation.", "print", "(...	29.285714	0.002364
def delete(self, s, p, o): """Remove the given subj-pred-obj triple from the database.""" with self.walrus.atomic(): for key in self.keys_for_values(s, p, o): del self._z[key]	[ "def", "delete", "(", "self", ",", "s", ",", "p", ",", "o", ")", ":", "with", "self", ".", "walrus", ".", "atomic", "(", ")", ":", "for", "key", "in", "self", ".", "keys_for_values", "(", "s", ",", "p", ",", "o", ")", ":", "del", "self", ".",...	43	0.009132
def com_google_fonts_check_family_tnum_horizontal_metrics(fonts): """All tabular figures must have the same width across the RIBBI-family.""" from fontbakery.constants import RIBBI_STYLE_NAMES from fontTools.ttLib import TTFont RIBBI_ttFonts = [TTFont(f) for f in fonts if s...	[ "def", "com_google_fonts_check_family_tnum_horizontal_metrics", "(", "fonts", ")", ":", "from", "fontbakery", ".", "constants", "import", "RIBBI_STYLE_NAMES", "from", "fontTools", ".", "ttLib", "import", "TTFont", "RIBBI_ttFonts", "=", "[", "TTFont", "(", "f", ")", ...	38	0.010109

def triangulate(self): """Do the triangulation """ self._initialize() pts = self.pts front = self._front ## Begin sweep (sec. 3.4) for i in range(3, pts.shape[0]): pi = pts[i] #debug("========== New point %d: %s ==========...

[ "def", "triangulate", "(", "self", ")", ":", "self", ".", "_initialize", "(", ")", "pts", "=", "self", ".", "pts", "front", "=", "self", ".", "_front", "## Begin sweep (sec. 3.4)", "for", "i", "in", "range", "(", "3", ",", "pts", ".", "shape", "[", "...

37.678161

0.009215

def imwrite(file, data=None, shape=None, dtype=None, **kwargs): """Write numpy array to TIFF file. Refer to the TiffWriter class and its asarray function for documentation. A BigTIFF file is created if the data size in bytes is larger than 4 GB minus 32 MB (for metadata), and 'bigtiff' is not specifie...

[ "def", "imwrite", "(", "file", ",", "data", "=", "None", ",", "shape", "=", "None", ",", "dtype", "=", "None", ",", "*", "*", "kwargs", ")", ":", "tifargs", "=", "parse_kwargs", "(", "kwargs", ",", "'append'", ",", "'bigtiff'", ",", "'byteorder'", ",...

38.45614

0.000445

def to_numpy(nd4j_array): """ Convert an ND4J array to a numpy array :param nd4j_array: :return: """ buff = nd4j_array.data() address = buff.pointer().address() type_name = java_classes.DataTypeUtil.getDtypeFromContext() data_type = java_classes.DataTypeUtil.getDTypeForName(type_name) ...

[ "def", "to_numpy", "(", "nd4j_array", ")", ":", "buff", "=", "nd4j_array", ".", "data", "(", ")", "address", "=", "buff", ".", "pointer", "(", ")", ".", "address", "(", ")", "type_name", "=", "java_classes", ".", "DataTypeUtil", ".", "getDtypeFromContext",...

33.882353

0.001689

def connect(self, protocol=None): """! @brief Initialize DAP IO pins for JTAG or SWD""" self._link.enter_debug(STLink.Protocol.SWD) self._is_connected = True

[ "def", "connect", "(", "self", ",", "protocol", "=", "None", ")", ":", "self", ".", "_link", ".", "enter_debug", "(", "STLink", ".", "Protocol", ".", "SWD", ")", "self", ".", "_is_connected", "=", "True" ]

44.5

0.01105

def only_pallets_theme(default=None): """Create a decorator that calls a function only if the ``is_pallets_theme`` config is ``True``. Used to prevent Sphinx event callbacks from doing anything if the Pallets themes are installed but not used. :: @only_pallets_theme() def inject_value(...

[ "def", "only_pallets_theme", "(", "default", "=", "None", ")", ":", "def", "decorator", "(", "f", ")", ":", "@", "wraps", "(", "f", ")", "def", "wrapped", "(", "app", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "if", "not", "app", ".", ...

25.892857

0.00133

def parse_change_info(e_change_info): """ Parses a ChangeInfo tag. Seen in CreateHostedZone, DeleteHostedZone, and ChangeResourceRecordSetsRequest. :param lxml.etree._Element e_change_info: A ChangeInfo element. :rtype: dict :returns: A dict representation of the change info. """ if e_...

[ "def", "parse_change_info", "(", "e_change_info", ")", ":", "if", "e_change_info", "is", "None", ":", "return", "e_change_info", "status", "=", "e_change_info", ".", "find", "(", "'./{*}Status'", ")", ".", "text", "submitted_at", "=", "e_change_info", ".", "find...

29.363636

0.001499

def limited_join(sep, items, max_chars=30, overflow_marker="..."): """Join a number of strings to one, limiting the length to *max_chars*. If the string overflows this limit, replace the last fitting item by *overflow_marker*. Returns: joined_string """ full_str = sep.join(items) if len(fu...

[ "def", "limited_join", "(", "sep", ",", "items", ",", "max_chars", "=", "30", ",", "overflow_marker", "=", "\"...\"", ")", ":", "full_str", "=", "sep", ".", "join", "(", "items", ")", "if", "len", "(", "full_str", ")", "<", "max_chars", ":", "return", ...

28.590909

0.001538

def persist(self, ttl=None, **kwargs): """Save data from this source to local persistent storage""" from ..container import container_map from ..container.persist import PersistStore import time if 'original_tok' in self.metadata: raise ValueError('Cannot persist a so...

[ "def", "persist", "(", "self", ",", "ttl", "=", "None", ",", "*", "*", "kwargs", ")", ":", "from", ".", ".", "container", "import", "container_map", "from", ".", ".", "container", ".", "persist", "import", "PersistStore", "import", "time", "if", "'origin...

45.208333

0.001805

def do_handshake(self): """Start the SSL handshake. This method only needs to be called if this transport was created with *do_handshake_on_connect* set to False (the default is True). The handshake needs to be synchronized between the both endpoints, so that SSL record level d...

[ "def", "do_handshake", "(", "self", ")", ":", "if", "self", ".", "_error", ":", "raise", "compat", ".", "saved_exc", "(", "self", ".", "_error", ")", "elif", "self", ".", "_closing", "or", "self", ".", "_handle", ".", "closed", ":", "raise", "Transport...

44.944444

0.002421

def control(self, instances, action): """Valid actions: start, stop, reboot, terminate, protect, and unprotect. """ if not isinstance(instances, list) and\ not isinstance(instances, tuple): instances = [instances] actions = {'start': {'operation': "StartIns...

[ "def", "control", "(", "self", ",", "instances", ",", "action", ")", ":", "if", "not", "isinstance", "(", "instances", ",", "list", ")", "and", "not", "isinstance", "(", "instances", ",", "tuple", ")", ":", "instances", "=", "[", "instances", "]", "act...

52.878788

0.001125

def get(self, block=True, timeout=None): """get an item out of the queue .. note:: if `block` is ``True`` (the default) and the queue is :meth`empty`, this method will block the current coroutine until something has been :meth:`put`. :param block: ...

[ "def", "get", "(", "self", ",", "block", "=", "True", ",", "timeout", "=", "None", ")", ":", "if", "not", "self", ".", "_data", ":", "if", "not", "block", ":", "raise", "Empty", "(", ")", "current", "=", "compat", ".", "getcurrent", "(", ")", "wa...

33.617021

0.00123

def get_page(self, rel_url, include_draft=False): """ Get custom page for given relative url from filesystem. Possible input: - my-page/ - my-page/index.html - my-another-page.html - a/b/c/ - a/b/c/d.html :param rel_url: relative url :par...

[ "def", "get_page", "(", "self", ",", "rel_url", ",", "include_draft", "=", "False", ")", ":", "page_dir", "=", "os", ".", "path", ".", "dirname", "(", "rel_url", ".", "replace", "(", "'/'", ",", "os", ".", "path", ".", "sep", ")", ")", "page_path", ...

36.97619

0.001255

def _setPWMFrequency(self, pwm, device, message): """ Set the PWM frequency. :Parameters: pwm : `int` The PWN frequency to set in hertz. device : `int` The device is the integer number of the hardware devices ID and is only used with the P...

[ "def", "_setPWMFrequency", "(", "self", ",", "pwm", ",", "device", ",", "message", ")", ":", "value", "=", "self", ".", "_CONFIG_PWM_TO_VALUE", ".", "get", "(", "pwm", ")", "if", "value", "is", "None", ":", "msg", "=", "\"Invalid frequency: {}\"", ".", "...

35.153846

0.00213

def vector_to_symmetric(v): '''Convert an iterable into a symmetric matrix.''' np = len(v) N = (int(sqrt(1 + 8*np)) - 1)//2 if N*(N+1)//2 != np: raise ValueError('Cannot convert vector to symmetric matrix') sym = ndarray((N,N)) iterable = iter(v) for r in range(N): f...

[ "def", "vector_to_symmetric", "(", "v", ")", ":", "np", "=", "len", "(", "v", ")", "N", "=", "(", "int", "(", "sqrt", "(", "1", "+", "8", "*", "np", ")", ")", "-", "1", ")", "//", "2", "if", "N", "*", "(", "N", "+", "1", ")", "//", "2",...

32.916667

0.009852

def json_loads(inbox): """ Deserializes the first element of the input using the JSON protocol as implemented by the ``json`` Python 2.6 library. """ gc.disable() obj = json.loads(inbox[0]) gc.enable() return obj

[ "def", "json_loads", "(", "inbox", ")", ":", "gc", ".", "disable", "(", ")", "obj", "=", "json", ".", "loads", "(", "inbox", "[", "0", "]", ")", "gc", ".", "enable", "(", ")", "return", "obj" ]

24.1

0.012

def _count_devices(self): """See what Windows' GetRawInputDeviceList wants to tell us. For now, we are just seeing if there is at least one keyboard and/or mouse attached. GetRawInputDeviceList could be used to help distinguish between different keyboards and mice on the system...

[ "def", "_count_devices", "(", "self", ")", ":", "number_of_devices", "=", "ctypes", ".", "c_uint", "(", ")", "if", "ctypes", ".", "windll", ".", "user32", ".", "GetRawInputDeviceList", "(", "ctypes", ".", "POINTER", "(", "ctypes", ".", "c_int", ")", "(", ...

39.404762

0.001179

def _setuie(self, i): """Initialise bitstring with unsigned interleaved exponential-Golomb code for integer i. Raises CreationError if i < 0. """ if i < 0: raise CreationError("Cannot use negative initialiser for unsigned " "interleaved expon...

[ "def", "_setuie", "(", "self", ",", "i", ")", ":", "if", "i", "<", "0", ":", "raise", "CreationError", "(", "\"Cannot use negative initialiser for unsigned \"", "\"interleaved exponential-Golomb.\"", ")", "self", ".", "_setbin_unsafe", "(", "'1'", "if", "i", "==",...

41.2

0.009501

def restore(name): """Restores the database from a snapshot""" app = get_app() if not name: snapshot = app.get_latest_snapshot() if not snapshot: click.echo( "Couldn't find any snapshots for project %s" % load_config()['project_name'] ...

[ "def", "restore", "(", "name", ")", ":", "app", "=", "get_app", "(", ")", "if", "not", "name", ":", "snapshot", "=", "app", ".", "get_latest_snapshot", "(", ")", "if", "not", "snapshot", ":", "click", ".", "echo", "(", "\"Couldn't find any snapshots for pr...

31.121951

0.00076

def filter_dirs(root, dirs, excl_paths): """Filter directory paths based on the exclusion rules defined in 'excl_paths'. """ filtered_dirs = [] for dirpath in dirs: abspath = os.path.abspath(os.path.join(root, dirpath)) if os.path.basename(abspath) in _SKIP_DIRS: continue...

[ "def", "filter_dirs", "(", "root", ",", "dirs", ",", "excl_paths", ")", ":", "filtered_dirs", "=", "[", "]", "for", "dirpath", "in", "dirs", ":", "abspath", "=", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "join", "(", "root", "...

34.5

0.002353

def run(self, cmd, sudo=False, ignore_error=False, success_status=(0,), error_callback=None, custom_log=None, retry=0): """Run a command on the remote host. The command is run on the remote host, if there is a redirected host then the command will be run on that redirected host. See...

[ "def", "run", "(", "self", ",", "cmd", ",", "sudo", "=", "False", ",", "ignore_error", "=", "False", ",", "success_status", "=", "(", "0", ",", ")", ",", "error_callback", "=", "None", ",", "custom_log", "=", "None", ",", "retry", "=", "0", ")", ":...

42.610169

0.001944

def readconf(conffile, section_name=None, log_name=None, defaults=None, raw=False): """ Read config file and return config items as a dict :param conffile: path to config file, or a file-like object (hasattr readline) :param section_name: config section to read (will r...

[ "def", "readconf", "(", "conffile", ",", "section_name", "=", "None", ",", "log_name", "=", "None", ",", "defaults", "=", "None", ",", "raw", "=", "False", ")", ":", "if", "defaults", "is", "None", ":", "defaults", "=", "{", "}", "if", "raw", ":", ...

33.934783

0.001868

def _urlunquote(byte_string, remap=None, preserve=None): """ Unquotes a URI portion from a byte string into unicode using UTF-8 :param byte_string: A byte string of the data to unquote :param remap: A list of characters (as unicode) that should be re-mapped to a %XX encoding. T...

[ "def", "_urlunquote", "(", "byte_string", ",", "remap", "=", "None", ",", "preserve", "=", "None", ")", ":", "if", "byte_string", "is", "None", ":", "return", "byte_string", "if", "byte_string", "==", "b''", ":", "return", "''", "if", "preserve", ":", "r...

29.489362

0.002095

def crtGauss2D(varSizeX, varSizeY, varPosX, varPosY, varSd): """Create 2D Gaussian kernel. Parameters ---------- varSizeX : int, positive Width of the visual field. varSizeY : int, positive Height of the visual field.. varPosX : int, positive X position of centre of 2D G...

[ "def", "crtGauss2D", "(", "varSizeX", ",", "varSizeY", ",", "varPosX", ",", "varPosY", ",", "varSd", ")", ":", "varSizeX", "=", "int", "(", "varSizeX", ")", "varSizeY", "=", "int", "(", "varSizeY", ")", "# aryX and aryY are in reversed order, this seems to be nece...

27.526316

0.000923

def enable(self): """ Enables WinPair settings """ npair = self.npair.value() for label, xsl, xsr, ys, nx, ny in \ zip(self.label[:npair], self.xsl[:npair], self.xsr[:npair], self.ys[:npair], self.nx[:npair], self.ny[:npair]): label...

[ "def", "enable", "(", "self", ")", ":", "npair", "=", "self", ".", "npair", ".", "value", "(", ")", "for", "label", ",", "xsl", ",", "xsr", ",", "ys", ",", "nx", ",", "ny", "in", "zip", "(", "self", ".", "label", "[", ":", "npair", "]", ",", ...

31.413793

0.00213

def get_by_id_or_404(self, id, **kwargs): """Gets by a instance instance r raises a 404 is one isn't found.""" obj = self.get_by_id(id=id, **kwargs) if obj: return obj raise Http404

[ "def", "get_by_id_or_404", "(", "self", ",", "id", ",", "*", "*", "kwargs", ")", ":", "obj", "=", "self", ".", "get_by_id", "(", "id", "=", "id", ",", "*", "*", "kwargs", ")", "if", "obj", ":", "return", "obj", "raise", "Http404" ]

27.5

0.008811

def to_gds(self, multiplier): """ Convert this object to a GDSII element. Parameters ---------- multiplier : number A number that multiplies all dimensions written in the GDSII element. Returns ------- out : string The...

[ "def", "to_gds", "(", "self", ",", "multiplier", ")", ":", "name", "=", "self", ".", "ref_cell", ".", "name", "if", "len", "(", "name", ")", "%", "2", "!=", "0", ":", "name", "=", "name", "+", "'\\0'", "data", "=", "struct", ".", "pack", "(", "...

43.206349

0.001437

def sqs(self): """ :rtype: SQSConnection """ if self.__sqs is None: self.__sqs = self.__aws_connect(sqs) return self.__sqs

[ "def", "sqs", "(", "self", ")", ":", "if", "self", ".", "__sqs", "is", "None", ":", "self", ".", "__sqs", "=", "self", ".", "__aws_connect", "(", "sqs", ")", "return", "self", ".", "__sqs" ]

24

0.011494

def add_conditional_state(self, name, state, validator, class_validator=None, cache_for=None, label=None): """ Add a conditional state that combines an existing state with a validator that must also pass. The validator receives the object on which the property is present as a parameter. ...

[ "def", "add_conditional_state", "(", "self", ",", "name", ",", "state", ",", "validator", ",", "class_validator", "=", "None", ",", "cache_for", "=", "None", ",", "label", "=", "None", ")", ":", "# We'll accept a ManagedState with grouped values, but not a ManagedStat...

62.466667

0.008933

def point(self, x, y, z=0, m=0): """Creates a point shape.""" pointShape = _Shape(self.shapeType) pointShape.points.append([x, y, z, m]) self._shapes.append(pointShape)

[ "def", "point", "(", "self", ",", "x", ",", "y", ",", "z", "=", "0", ",", "m", "=", "0", ")", ":", "pointShape", "=", "_Shape", "(", "self", ".", "shapeType", ")", "pointShape", ".", "points", ".", "append", "(", "[", "x", ",", "y", ",", "z",...

40

0.009804

def get_api_publisher(self, social_user): """ and other https://vk.com/dev.php?method=wall.post """ def _post(**kwargs): api = self.get_api(social_user) from pudb import set_trace; set_trace() # api.group.getInfo('uids'='your_group_id', 'fields'='...

[ "def", "get_api_publisher", "(", "self", ",", "social_user", ")", ":", "def", "_post", "(", "*", "*", "kwargs", ")", ":", "api", "=", "self", ".", "get_api", "(", "social_user", ")", "from", "pudb", "import", "set_trace", "set_trace", "(", ")", "# api.gr...

32.384615

0.011547

def _shorten_line_at_tokens_new(tokens, source, indentation, max_line_length): """Shorten the line taking its length into account. The input is expected to be free of newlines except for inside multiline strings and at the end. """ # Yield the original source so to ...

[ "def", "_shorten_line_at_tokens_new", "(", "tokens", ",", "source", ",", "indentation", ",", "max_line_length", ")", ":", "# Yield the original source so to see if it's a better choice than the", "# shortened candidate lines we generate here.", "yield", "indentation", "+", "source"...

41.461538

0.000907

def f2tc(f,base=25): """Converts frames to timecode""" try: f = int(f) except: return "--:--:--:--" hh = int((f / base) / 3600) mm = int(((f / base) / 60) - (hh*60)) ss = int((f/base) - (hh*3600) - (mm*60)) ff = int(f - (hh*3600*base) - (mm*60*base) - (ss*base)) return "{...

[ "def", "f2tc", "(", "f", ",", "base", "=", "25", ")", ":", "try", ":", "f", "=", "int", "(", "f", ")", "except", ":", "return", "\"--:--:--:--\"", "hh", "=", "int", "(", "(", "f", "/", "base", ")", "/", "3600", ")", "mm", "=", "int", "(", "...

32.727273

0.008108

def create_attributes(klass, attributes, previous_object=None): """ Attributes for resource creation. """ result = {} if previous_object is not None: result = {k: v for k, v in previous_object.to_json().items() if k != 'sys'} result.update(attributes) ...

[ "def", "create_attributes", "(", "klass", ",", "attributes", ",", "previous_object", "=", "None", ")", ":", "result", "=", "{", "}", "if", "previous_object", "is", "not", "None", ":", "result", "=", "{", "k", ":", "v", "for", "k", ",", "v", "in", "pr...

25

0.008902

def _parse_operation_bytes(unpacker): """Returns a protobuf message representing the next operation as read from the byte stream in unpacker """ # Check for and parse optional source account field source_account = None if unpacker.unpack_bool(): source_account = unpacker.unpack_fopaque(...

[ "def", "_parse_operation_bytes", "(", "unpacker", ")", ":", "# Check for and parse optional source account field", "source_account", "=", "None", "if", "unpacker", ".", "unpack_bool", "(", ")", ":", "source_account", "=", "unpacker", ".", "unpack_fopaque", "(", "32", ...

31.930818

0.000573

def _initialize_precalculated_series(self, asset, trading_calendar, trading_days, data_portal): """ Internal method that pre-calculates the ...

[ "def", "_initialize_precalculated_series", "(", "self", ",", "asset", ",", "trading_calendar", ",", "trading_days", ",", "data_portal", ")", ":", "if", "self", ".", "emission_rate", "==", "\"minute\"", ":", "minutes", "=", "trading_calendar", ".", "minutes_for_sessi...

35.162393

0.001418

def send_rally_points(self): '''send rally points from rallyloader''' self.mav_param.mavset(self.master,'RALLY_TOTAL',self.rallyloader.rally_count(),3) for i in range(self.rallyloader.rally_count()): self.send_rally_point(i)

[ "def", "send_rally_points", "(", "self", ")", ":", "self", ".", "mav_param", ".", "mavset", "(", "self", ".", "master", ",", "'RALLY_TOTAL'", ",", "self", ".", "rallyloader", ".", "rally_count", "(", ")", ",", "3", ")", "for", "i", "in", "range", "(", ...

42.666667

0.022989

def rectify(self, slitlet2d, resampling, inverse=False): """Rectify slitlet using computed transformation. Parameters ---------- slitlet2d : numpy array Image containing the 2d slitlet image. resampling : int 1: nearest neighbour, 2: flux preserving inter...

[ "def", "rectify", "(", "self", ",", "slitlet2d", ",", "resampling", ",", "inverse", "=", "False", ")", ":", "if", "resampling", "not", "in", "[", "1", ",", "2", "]", ":", "raise", "ValueError", "(", "\"Unexpected resampling value=\"", "+", "str", "(", "r...

29.192308

0.001275

def removedIssuesEstimateSum(self, board_id, sprint_id): """Return the total incompleted points this sprint.""" return self._get_json('rapid/charts/sprintreport?rapidViewId=%s&sprintId=%s' % (board_id, sprint_id), base=self.AGILE_BASE_URL)['contents']['puntedIssuesEstimateS...

[ "def", "removedIssuesEstimateSum", "(", "self", ",", "board_id", ",", "sprint_id", ")", ":", "return", "self", ".", "_get_json", "(", "'rapid/charts/sprintreport?rapidViewId=%s&sprintId=%s'", "%", "(", "board_id", ",", "sprint_id", ")", ",", "base", "=", "self", "...

82.5

0.012012

def dockerCheckOutput(*args, **kwargs): """ Deprecated. Runs subprocessDockerCall() using 'subprocess.check_output()'. Provided for backwards compatibility with a previous implementation that used 'subprocess.check_output()'. This has since been supplanted and apiDockerCall() is recommended. ...

[ "def", "dockerCheckOutput", "(", "*", "args", ",", "*", "*", "kwargs", ")", ":", "logger", ".", "warn", "(", "\"WARNING: dockerCheckOutput() using subprocess.check_output() \"", "\"is deprecated, please switch to apiDockerCall().\"", ")", "return", "subprocessDockerCall", "("...

48

0.001859

def xmlrpc_method(**kwargs): """ Support multiple endpoints serving the same views by chaining calls to xmlrpc_method """ # Add some default arguments kwargs.update( require_csrf=False, require_methods=["POST"], decorator=(submit_xmlrpc_metrics(method=kwargs["method"]),),...

[ "def", "xmlrpc_method", "(", "*", "*", "kwargs", ")", ":", "# Add some default arguments", "kwargs", ".", "update", "(", "require_csrf", "=", "False", ",", "require_methods", "=", "[", "\"POST\"", "]", ",", "decorator", "=", "(", "submit_xmlrpc_metrics", "(", ...

30.7

0.00158

def get_memcached_usage(socket=None): """ Returns memcached statistics. :param socket: Path to memcached's socket file. """ cmd = 'echo \'stats\' | nc -U {0}'.format(socket) output = getoutput(cmd) curr_items = None bytes_ = None rows = output.split('\n')[:-1] for row in rows:...

[ "def", "get_memcached_usage", "(", "socket", "=", "None", ")", ":", "cmd", "=", "'echo \\'stats\\' | nc -U {0}'", ".", "format", "(", "socket", ")", "output", "=", "getoutput", "(", "cmd", ")", "curr_items", "=", "None", "bytes_", "=", "None", "rows", "=", ...

24.7

0.001949

def read_header(self): """Read the header from `file`. The header is also stored in the `header` attribute. Returns ------- header : `OrderedDict` Header from `file`, stored in an ordered dictionary, where each entry has the following form:: ...

[ "def", "read_header", "(", "self", ")", ":", "# Read all fields except data. We use an OrderedDict such that", "# the order is the same as in `header_fields`. This makes it simple", "# to write later on in the correct order, based only on `header`.", "header", "=", "OrderedDict", "(", ")",...

39.170455

0.000566

def write_file(spdx_file, out): """ Write a file fields to out. """ out.write('# File\n\n') write_value('FileName', spdx_file.name, out) write_value('SPDXID', spdx_file.spdx_id, out) if spdx_file.has_optional_field('type'): write_file_type(spdx_file.type, out) write_value('FileCh...

[ "def", "write_file", "(", "spdx_file", ",", "out", ")", ":", "out", ".", "write", "(", "'# File\\n\\n'", ")", "write_value", "(", "'FileName'", ",", "spdx_file", ".", "name", ",", "out", ")", "write_value", "(", "'SPDXID'", ",", "spdx_file", ".", "spdx_id"...

39.816327

0.001501

def rpc(rtype=None): """Decorator marks a method for export. :param type: Specifies which :py:class:`Type` this method will return. The return type (rtype) must be one of: - An instance of :py:class:`p4p.Type` - None, in which case the method must return a :py:class:`p4p.Value` - One of the N...

[ "def", "rpc", "(", "rtype", "=", "None", ")", ":", "wrap", "=", "None", "if", "rtype", "is", "None", "or", "isinstance", "(", "rtype", ",", "Type", ")", ":", "pass", "elif", "isinstance", "(", "type", ",", "(", "list", ",", "tuple", ")", ")", ":"...

31.511628

0.002147

def cleanup_sessions(self, app=None): """Removes all expired session from the store. Periodically, this function can be called to remove sessions from the backend store that have expired, as they are not removed automatically unless the backend supports time-to-live and has been ...

[ "def", "cleanup_sessions", "(", "self", ",", "app", "=", "None", ")", ":", "if", "not", "app", ":", "app", "=", "current_app", "for", "key", "in", "app", ".", "kvsession_store", ".", "keys", "(", ")", ":", "m", "=", "self", ".", "key_regex", ".", "...

40.758621

0.001653

def step( self ): """ Returns the step value for this ruler. If the cached value is None, then a default value will be specified based on the ruler type. :return <variant> """ if ( self._step is not None ): return self._step eli...

[ "def", "step", "(", "self", ")", ":", "if", "(", "self", ".", "_step", "is", "not", "None", ")", ":", "return", "self", ".", "_step", "elif", "(", "self", ".", "rulerType", "(", ")", "==", "XChartRuler", ".", "Type", ".", "Number", ")", ":", "sel...

38.045455

0.022145

def _update_throughput(self, tablename, read, write, index): """ Update the throughput on a table or index """ def get_desc(): """ Get the table or global index description """ desc = self.describe(tablename, refresh=True, require=True) if index is not None: ...

[ "def", "_update_throughput", "(", "self", ",", "tablename", ",", "read", ",", "write", ",", "index", ")", ":", "def", "get_desc", "(", ")", ":", "\"\"\" Get the table or global index description \"\"\"", "desc", "=", "self", ".", "describe", "(", "tablename", ",...

33.294118

0.001717

def _setup_trunk(self, trunk, vlan_id=None): """Sets up VLAN trunk and updates the trunk status.""" LOG.info('Binding trunk port: %s.', trunk) try: # bind sub_ports to host. self._trunk_rpc.update_subport_bindings(self._context, ...

[ "def", "_setup_trunk", "(", "self", ",", "trunk", ",", "vlan_id", "=", "None", ")", ":", "LOG", ".", "info", "(", "'Binding trunk port: %s.'", ",", "trunk", ")", "try", ":", "# bind sub_ports to host.", "self", ".", "_trunk_rpc", ".", "update_subport_bindings", ...

47

0.002195

def _perform_async_update_rule(context, id, db_sg_group, rule_id, action): """Updates a SG rule async and return the job information. Only happens if the security group has associated ports. If the async connection fails the update continues (legacy mode). """ rpc_reply = None sg_rpc = sg_rpc_a...

[ "def", "_perform_async_update_rule", "(", "context", ",", "id", ",", "db_sg_group", ",", "rule_id", ",", "action", ")", ":", "rpc_reply", "=", "None", "sg_rpc", "=", "sg_rpc_api", ".", "QuarkSGAsyncProcessClient", "(", ")", "ports", "=", "db_api", ".", "sg_gat...

43.625

0.001403

def resize(self, shape, format=None, internalformat=None): """Set the texture size and format Parameters ---------- shape : tuple of integers New texture shape in zyx order. Optionally, an extra dimention may be specified to indicate the number of color channels....

[ "def", "resize", "(", "self", ",", "shape", ",", "format", "=", "None", ",", "internalformat", "=", "None", ")", ":", "return", "self", ".", "_resize", "(", "shape", ",", "format", ",", "internalformat", ")" ]

52

0.001642

def run_bidirectional_blast(reference, other_genome, dbtype, outdir=''): """BLAST a genome against another, and vice versa. This function requires BLAST to be installed, do so by running: sudo apt install ncbi-blast+ Args: reference (str): path to "reference" genome, aka your "base strain" ...

[ "def", "run_bidirectional_blast", "(", "reference", ",", "other_genome", ",", "dbtype", ",", "outdir", "=", "''", ")", ":", "# TODO: add force_rerun option", "if", "dbtype", "==", "'nucl'", ":", "command", "=", "'blastn'", "elif", "dbtype", "==", "'prot'", ":", ...

40.241935

0.001565

def main(): """ Reports stats on the workflow, use with --stats option to toil. """ parser = getBasicOptionParser() initializeOptions(parser) options = parseBasicOptions(parser) checkOptions(options, parser) config = Config() config.setOptions(options) jobStore = Toil.resumeJobStore(...

[ "def", "main", "(", ")", ":", "parser", "=", "getBasicOptionParser", "(", ")", "initializeOptions", "(", "parser", ")", "options", "=", "parseBasicOptions", "(", "parser", ")", "checkOptions", "(", "options", ",", "parser", ")", "config", "=", "Config", "(",...

35.076923

0.002137

def readObject(self): """read object""" try: _, res = self._read_and_exec_opcode(ident=0) position_bak = self.object_stream.tell() the_rest = self.object_stream.read() if len(the_rest): log_error("Warning!!!!: Stream still has %s bytes left.\ Enable debug mode of logging to see ...

[ "def", "readObject", "(", "self", ")", ":", "try", ":", "_", ",", "res", "=", "self", ".", "_read_and_exec_opcode", "(", "ident", "=", "0", ")", "position_bak", "=", "self", ".", "object_stream", ".", "tell", "(", ")", "the_rest", "=", "self", ".", "...

30.473684

0.01675

def add(self, score, user, ip_address, cookies={}, commit=True): """add(score, user, ip_address) Used to add a rating to an object.""" try: score = int(score) except (ValueError, TypeError): raise InvalidRating("%s is not a valid choice for %s" % (score, ...

[ "def", "add", "(", "self", ",", "score", ",", "user", ",", "ip_address", ",", "cookies", "=", "{", "}", ",", "commit", "=", "True", ")", ":", "try", ":", "score", "=", "int", "(", "score", ")", "except", "(", "ValueError", ",", "TypeError", ")", ...

40.319672

0.012897

def fromlist(items, accessor=None, keys=None, dims=None, dtype=None, labels=None, npartitions=None, engine=None): """ Load images from a list of items using the given accessor. Parameters ---------- accessor : function Apply to each item from the list to yield an image. keys : list, op...

[ "def", "fromlist", "(", "items", ",", "accessor", "=", "None", ",", "keys", "=", "None", ",", "dims", "=", "None", ",", "dtype", "=", "None", ",", "labels", "=", "None", ",", "npartitions", "=", "None", ",", "engine", "=", "None", ")", ":", "if", ...

33.410256

0.002237

def visit_member(self, attribute_key, attribute, member_node, member_data, is_link_node, parent_data, index=None): """ Visits a member node in a resource data tree. :param tuple attribute_key: tuple containing the attribute tokens identifying the member node's pos...

[ "def", "visit_member", "(", "self", ",", "attribute_key", ",", "attribute", ",", "member_node", ",", "member_data", ",", "is_link_node", ",", "parent_data", ",", "index", "=", "None", ")", ":", "raise", "NotImplementedError", "(", "'Abstract method.'", ")" ]

59.5

0.002068

def flow_removed_handler(self, evt): """FlowRemoved event handler. when the removed flow entry was for LACP, set the status of the slave i/f to disabled, and send a event.""" msg = evt.msg datapath = msg.datapath ofproto = datapath.ofproto dpid = datapath.id ...

[ "def", "flow_removed_handler", "(", "self", ",", "evt", ")", ":", "msg", "=", "evt", ".", "msg", "datapath", "=", "msg", ".", "datapath", "ofproto", "=", "datapath", ".", "ofproto", "dpid", "=", "datapath", ".", "id", "match", "=", "msg", ".", "match",...

38.375

0.002119

def all_synsets(self): ''' A generator over all the synsets in the GermaNet database. ''' for synset_dict in self._mongo_db.synsets.find(): yield Synset(self, synset_dict)

[ "def", "all_synsets", "(", "self", ")", ":", "for", "synset_dict", "in", "self", ".", "_mongo_db", ".", "synsets", ".", "find", "(", ")", ":", "yield", "Synset", "(", "self", ",", "synset_dict", ")" ]

35

0.009302

def checkout(self, ref, branch=None): """Do a git checkout of `ref`.""" return git_checkout(self.repo_dir, ref, branch=branch)

[ "def", "checkout", "(", "self", ",", "ref", ",", "branch", "=", "None", ")", ":", "return", "git_checkout", "(", "self", ".", "repo_dir", ",", "ref", ",", "branch", "=", "branch", ")" ]

46.666667

0.014085

def after_this_request(func: Callable) -> Callable: """Schedule the func to be called after the current request. This is useful in situations whereby you want an after request function for a specific route or circumstance only, for example, .. code-block:: python def index(): @aft...

[ "def", "after_this_request", "(", "func", ":", "Callable", ")", "->", "Callable", ":", "_request_ctx_stack", ".", "top", ".", "_after_request_functions", ".", "append", "(", "func", ")", "return", "func" ]

30.555556

0.001764

def preprocess_data(): """ Get the Enron e-mails from disk. Represent them as bag-of-words. Shuffle and split train/test. """ print("Importing dataset from disk...") path = 'enron1/ham/' ham1 = [open(path + f, 'r', errors='replace').read().strip(r"\n") for f in os.listdir(pa...

[ "def", "preprocess_data", "(", ")", ":", "print", "(", "\"Importing dataset from disk...\"", ")", "path", "=", "'enron1/ham/'", "ham1", "=", "[", "open", "(", "path", "+", "f", ",", "'r'", ",", "errors", "=", "'replace'", ")", ".", "read", "(", ")", ".",...

35.652174

0.000593

def XML(uri, tc, ps, **keywords): '''Resolve a URI and return its content as an XML DOM. ''' source = urllib.urlopen(uri, **keywords) enc = source.info().getencoding() if enc in ['7bit', '8bit', 'binary']: data = source else: data = StringIO.StringIO() mimetools.decode(so...

[ "def", "XML", "(", "uri", ",", "tc", ",", "ps", ",", "*", "*", "keywords", ")", ":", "source", "=", "urllib", ".", "urlopen", "(", "uri", ",", "*", "*", "keywords", ")", "enc", "=", "source", ".", "info", "(", ")", ".", "getencoding", "(", ")",...

32.615385

0.002294

def has_role_collective(self, identifiers, role_s, logical_operator): """ :param identifiers: a collection of identifiers :type identifiers: subject_abcs.IdentifierCollection :param role_s: a collection of 1..N Role identifiers :type role_s: Set of String(s) :param log...

[ "def", "has_role_collective", "(", "self", ",", "identifiers", ",", "role_s", ",", "logical_operator", ")", ":", "self", ".", "assert_realms_configured", "(", ")", "# interim_results is a set of tuples:", "interim_results", "=", "self", ".", "has_role", "(", "identifi...

36.088235

0.001587

def to_text(string, encoding="utf-8", errors=None): """Force a value to a text-type. :param string: Some input that can be converted to a unicode representation. :type string: str or bytes unicode :param encoding: The encoding to use for conversions, defaults to "utf-8" :param encoding: str, option...

[ "def", "to_text", "(", "string", ",", "encoding", "=", "\"utf-8\"", ",", "errors", "=", "None", ")", ":", "unicode_name", "=", "get_canonical_encoding_name", "(", "\"utf-8\"", ")", "if", "not", "errors", ":", "if", "get_canonical_encoding_name", "(", "encoding",...

38.105263

0.001347

def send(self, diff): """ Write the diff (toVol from fromVol) to the stream context manager. """ if not self.dryrun: self._fileSystemSync() return self.butter.send( self.getSendPath(diff.toVol), self.getSendPath(diff.fromVol), diff, se...

[ "def", "send", "(", "self", ",", "diff", ")", ":", "if", "not", "self", ".", "dryrun", ":", "self", ".", "_fileSystemSync", "(", ")", "return", "self", ".", "butter", ".", "send", "(", "self", ".", "getSendPath", "(", "diff", ".", "toVol", ")", ","...

31.272727

0.008475

def get_version(): """Obtain InaSAFE's version from version file. :returns: The current version number. :rtype: str """ # Get location of application wide version info root_dir = os.path.abspath(os.path.join(os.path.dirname(__file__))) version_file = os.path.join(root_dir, 'safe', 'definit...

[ "def", "get_version", "(", ")", ":", "# Get location of application wide version info", "root_dir", "=", "os", ".", "path", ".", "abspath", "(", "os", ".", "path", ".", "join", "(", "os", ".", "path", ".", "dirname", "(", "__file__", ")", ")", ")", "versio...

31.681818

0.001393

def authorization_header(oauth_params): """Return Authorization header""" authorization_headers = 'OAuth realm="",' authorization_headers += ','.join(['{0}="{1}"'.format(k, urllib.quote(str(v))) for k, v in oauth_params.items()]) return authorization_headers

[ "def", "authorization_header", "(", "oauth_params", ")", ":", "authorization_headers", "=", "'OAuth realm=\"\",'", "authorization_headers", "+=", "','", ".", "join", "(", "[", "'{0}=\"{1}\"'", ".", "format", "(", "k", ",", "urllib", ".", "quote", "(", "str", "("...

49.5

0.013245

def fit(self, data, debug=False): """ Fit the model to data and store/return the results. Parameters ---------- data : pandas.DataFrame Data to use for fitting the model. Must contain all the columns referenced by the `model_expression`. debug : b...

[ "def", "fit", "(", "self", ",", "data", ",", "debug", "=", "False", ")", ":", "with", "log_start_finish", "(", "'fitting model {}'", ".", "format", "(", "self", ".", "name", ")", ",", "logger", ")", ":", "fit", "=", "fit_model", "(", "data", ",", "se...

39.473684

0.001301

def _get_map_from_user_by_id(self, user, map_id): """ Get a mapfile owned by a user from the database by map_id. """ req = Session.query(Map).select_from(join(Map, User)) try: return req.filter(and_(User.login==user, Map.id==map_id)).one() except Exception, e: ...

[ "def", "_get_map_from_user_by_id", "(", "self", ",", "user", ",", "map_id", ")", ":", "req", "=", "Session", ".", "query", "(", "Map", ")", ".", "select_from", "(", "join", "(", "Map", ",", "User", ")", ")", "try", ":", "return", "req", ".", "filter"...

41.625

0.011765

def getAssociationFilename(self, server_url, handle): """Create a unique filename for a given server url and handle. This implementation does not assume anything about the format of the handle. The filename that is returned will contain the domain name from the server URL for ease of hum...

[ "def", "getAssociationFilename", "(", "self", ",", "server_url", ",", "handle", ")", ":", "if", "server_url", ".", "find", "(", "'://'", ")", "==", "-", "1", ":", "raise", "ValueError", "(", "'Bad server URL: %r'", "%", "server_url", ")", "proto", ",", "re...

37.869565

0.00224

def _get(self, url, method, host): """Get a request handler based on the URL of the request, or raises an error. Internal method for caching. :param url: request URL :param method: request method :return: handler, arguments, keyword arguments """ url = host + ur...

[ "def", "_get", "(", "self", ",", "url", ",", "method", ",", "host", ")", ":", "url", "=", "host", "+", "url", "# Check against known static routes", "route", "=", "self", ".", "routes_static", ".", "get", "(", "url", ")", "method_not_supported", "=", "self...

42.204082

0.000945

def F(Document, __raw__=None, **filters): """Generate a MongoDB filter document through parameter interpolation. Arguments passed by name have their name interpreted as an optional prefix (currently only `not`), a double- underscore Because this utility is likely going to be used frequently it has been given a ...

[ "def", "F", "(", "Document", ",", "__raw__", "=", "None", ",", "*", "*", "filters", ")", ":", "ops", "=", "Filter", "(", "__raw__", ")", "args", "=", "_process_arguments", "(", "Document", ",", "FILTER_PREFIX_MAP", ",", "FILTER_OPERATION_MAP", ",", "filter...

26.333333

0.051908

def https_policy_from_config(config): """ Create an ``IPolicyForHTTPS`` which can authenticate a Kubernetes API server. :param KubeConfig config: A Kubernetes configuration containing an active context identifying a cluster. The resulting ``IPolicyForHTTPS`` will authenticate the API s...

[ "def", "https_policy_from_config", "(", "config", ")", ":", "server", "=", "config", ".", "cluster", "[", "\"server\"", "]", "base_url", "=", "URL", ".", "fromText", "(", "native_string_to_unicode", "(", "server", ")", ")", "ca_certs", "=", "pem", ".", "pars...

34.763158

0.000736

def symbol_pos(self, cursor, character_type=OPEN, symbol_type=PAREN): """ Find the corresponding symbol position (line, column) of the specified symbol. If symbol type is PAREN and character_type is OPEN, the function will look for '('. :param cursor: QTextCursor :param ...

[ "def", "symbol_pos", "(", "self", ",", "cursor", ",", "character_type", "=", "OPEN", ",", "symbol_type", "=", "PAREN", ")", ":", "retval", "=", "None", ",", "None", "original_cursor", "=", "self", ".", "editor", ".", "textCursor", "(", ")", "self", ".", ...

43.434783

0.001959

def intersect(self, start_point, end_point): """Intersect the line segment with the box return the first intersection point and normal vector pointing into space from the box side intersected. If the line does not intersect, or lies completely in one side of the box return...

[ "def", "intersect", "(", "self", ",", "start_point", ",", "end_point", ")", ":", "sx", ",", "sy", ",", "sz", "=", "start_point", "ex", ",", "ey", ",", "ez", "=", "end_point", "p1x", ",", "p1y", ",", "p1z", "=", "self", ".", "point1", "p2x", ",", ...

49.578125

0.002472

def _get_referenced_services(specs): """ Returns all services that are referenced in specs.apps.depends.services, or in specs.bundles.services """ active_services = set() for app_spec in specs['apps'].values(): for service in app_spec['depends']['services']: active_services.a...

[ "def", "_get_referenced_services", "(", "specs", ")", ":", "active_services", "=", "set", "(", ")", "for", "app_spec", "in", "specs", "[", "'apps'", "]", ".", "values", "(", ")", ":", "for", "service", "in", "app_spec", "[", "'depends'", "]", "[", "'serv...

37.307692

0.002012

def post(self, url: str, data: List[dict]) -> List[dict]: """ Gives data to database """ data.update({ 'key': self.api_key, }) response = requests.post( url, data = json.dumps(data), headers = {'Content-type': 'application/json'}, ...

[ "def", "post", "(", "self", ",", "url", ":", "str", ",", "data", ":", "List", "[", "dict", "]", ")", "->", "List", "[", "dict", "]", ":", "data", ".", "update", "(", "{", "'key'", ":", "self", ".", "api_key", ",", "}", ")", "response", "=", "...

35

0.019272

def generate_static(self, path): """ This method generates a valid path to the public folder of the running project """ if not path: return "" if path[0] == '/': return "%s?v=%s" % (path, self.version) return "%s/%s?v=%s" % (self.static, path, se...

[ "def", "generate_static", "(", "self", ",", "path", ")", ":", "if", "not", "path", ":", "return", "\"\"", "if", "path", "[", "0", "]", "==", "'/'", ":", "return", "\"%s?v=%s\"", "%", "(", "path", ",", "self", ".", "version", ")", "return", "\"%s/%s?v...

29.181818

0.009063

def leaf_bus(self, df=False): """ Return leaf bus idx, line idx, and the line foreign key Returns ------- (list, list, list) or DataFrame """ # leafs - leaf bus idx # lines - line idx # fkey - the foreign key of Line, in 'bus1' or 'bus2', linking...

[ "def", "leaf_bus", "(", "self", ",", "df", "=", "False", ")", ":", "# leafs - leaf bus idx", "# lines - line idx", "# fkey - the foreign key of Line, in 'bus1' or 'bus2', linking the bus", "leafs", ",", "lines", ",", "fkeys", "=", "list", "(", ")", ",", "list", "(", ...

29

0.001756

def register(self, settings_class=NoSwitcher, *simple_checks, **conditions): """ Register a settings class with the switcher. Can be passed the settings class to register or be used as a decorator. :param settings_class: The class to register with the provided ...

[ "def", "register", "(", "self", ",", "settings_class", "=", "NoSwitcher", ",", "*", "simple_checks", ",", "*", "*", "conditions", ")", ":", "if", "settings_class", "is", "NoSwitcher", ":", "def", "decorator", "(", "cls", ")", ":", "self", ".", "register", ...

45.551724

0.002224

def plot_environments(self, isite, plot_type=None, title='Coordination numbers', max_dist=2.0, additional_condition=AC.ONLY_ACB, figsize=None, strategy=None): """ Plotting of the coordination numbers of a given site for all the distfactor/angfactor parameters. If the c...

[ "def", "plot_environments", "(", "self", ",", "isite", ",", "plot_type", "=", "None", ",", "title", "=", "'Coordination numbers'", ",", "max_dist", "=", "2.0", ",", "additional_condition", "=", "AC", ".", "ONLY_ACB", ",", "figsize", "=", "None", ",", "strate...

72.136364

0.008085

def table(self): """ 打印出account的内容 """ return pd.DataFrame([ self.message, ]).set_index( 'account_cookie', drop=False ).T

[ "def", "table", "(", "self", ")", ":", "return", "pd", ".", "DataFrame", "(", "[", "self", ".", "message", ",", "]", ")", ".", "set_index", "(", "'account_cookie'", ",", "drop", "=", "False", ")", ".", "T" ]

19.6

0.009756

def custom_except_hook(exc_info): """ A custom excepthook to present python errors produced by the CLI. We don't want to show end users big scary stacktraces if they aren't python programmers, so slim it down to some basic info. We keep a "DEBUGMODE" env variable kicking around to let us turn on sta...

[ "def", "custom_except_hook", "(", "exc_info", ")", ":", "exception_type", ",", "exception", ",", "traceback", "=", "exc_info", "# check if we're in debug mode, and run the real excepthook if we are", "ctx", "=", "click", ".", "get_current_context", "(", ")", "state", "=",...

43.319444

0.000313

def transform(self, X, lenscale=None): """ Apply the Fast Food RBF basis to X. Parameters ---------- X: ndarray (N, d) array of observations where N is the number of samples, and d is the dimensionality of X. lenscale: scalar or ndarray, optional ...

[ "def", "transform", "(", "self", ",", "X", ",", "lenscale", "=", "None", ")", ":", "lenscale", "=", "self", ".", "_check_dim", "(", "X", ".", "shape", "[", "1", "]", ",", "lenscale", ")", "VX", "=", "self", ".", "_makeVX", "(", "X", "/", "lenscal...

33.269231

0.002247

def remove(self, ids, **kwargs): """ Method to delete interface by id. :param ids: List containing identifiers of interfaces. """ url = build_uri_with_ids('api/v3/interface/%s/', ids) return super(ApiInterfaceRequest, self).delete(self.prepare_url(url, kwargs))

[ "def", "remove", "(", "self", ",", "ids", ",", "*", "*", "kwargs", ")", ":", "url", "=", "build_uri_with_ids", "(", "'api/v3/interface/%s/'", ",", "ids", ")", "return", "super", "(", "ApiInterfaceRequest", ",", "self", ")", ".", "delete", "(", "self", "....

37.875

0.009677

def nms(dets, thresh): """ greedily select boxes with high confidence and overlap with current maximum <= thresh rule out overlap >= thresh :param dets: [[x1, y1, x2, y2 score]] :param thresh: retain overlap < thresh :return: indexes to keep """ x1 = dets[:, 0] y1 = dets[:, 1] x2...

[ "def", "nms", "(", "dets", ",", "thresh", ")", ":", "x1", "=", "dets", "[", ":", ",", "0", "]", "y1", "=", "dets", "[", ":", ",", "1", "]", "x2", "=", "dets", "[", ":", ",", "2", "]", "y2", "=", "dets", "[", ":", ",", "3", "]", "scores"...

27.285714

0.002022

def getAttr(self, node, name, nsuri=None, default=join): """Return the value of the attribute named 'name' with the optional nsuri, or the default if one is specified. If nsuri is not specified, an attribute that matches the given name will be returned regardless of namespace.""...

[ "def", "getAttr", "(", "self", ",", "node", ",", "name", ",", "nsuri", "=", "None", ",", "default", "=", "join", ")", ":", "if", "nsuri", "is", "None", ":", "result", "=", "node", ".", "_attrs", ".", "get", "(", "name", ",", "None", ")", "if", ...

41.894737

0.002457

def connect(token, protocol=RtmProtocol, factory=WebSocketClientFactory, factory_kwargs=None, api_url=None, debug=False): """ Creates a new connection to the Slack Real-Time API. Returns (connection) which represents this connection to the API server. """ if factory_kwargs is None: factory_kwargs = dict() me...

[ "def", "connect", "(", "token", ",", "protocol", "=", "RtmProtocol", ",", "factory", "=", "WebSocketClientFactory", ",", "factory_kwargs", "=", "None", ",", "api_url", "=", "None", ",", "debug", "=", "False", ")", ":", "if", "factory_kwargs", "is", "None", ...

33.833333

0.027157

def _buildStartOpts(self, streamUrl, playList=False): """ Builds the options to pass to subprocess.""" #opts = [self.PLAYER_CMD, "-Irc", "--quiet", streamUrl] opts = [self.PLAYER_CMD, "-Irc", "-vv", streamUrl] return opts

[ "def", "_buildStartOpts", "(", "self", ",", "streamUrl", ",", "playList", "=", "False", ")", ":", "#opts = [self.PLAYER_CMD, \"-Irc\", \"--quiet\", streamUrl]", "opts", "=", "[", "self", ".", "PLAYER_CMD", ",", "\"-Irc\"", ",", "\"-vv\"", ",", "streamUrl", "]", "r...

49.8

0.011858

def cmp_res_R2(lstRat, lstNiiNames, strPathOut, strPathMdl, lgcSveMdlTc=True, lgcDel=False, strNmeExt=''): """"Compare results for different exponents and create winner nii. Parameters ---------- lstRat : list List of floats containing the ratios that were tested for surround ...

[ "def", "cmp_res_R2", "(", "lstRat", ",", "lstNiiNames", ",", "strPathOut", ",", "strPathMdl", ",", "lgcSveMdlTc", "=", "True", ",", "lgcDel", "=", "False", ",", "strNmeExt", "=", "''", ")", ":", "print", "(", "'---Compare results for different ratios'", ")", "...

46.550459

0.000482

def is_binary_file(file_obj): """ Returns True if file has non-ASCII characters (> 0x7F, or 127) Should work in both Python 2 and 3 """ start = file_obj.tell() fbytes = file_obj.read(1024) file_obj.seek(start) is_str = isinstance(fbytes, str) for fbyte in fbytes: if is_str: ...

[ "def", "is_binary_file", "(", "file_obj", ")", ":", "start", "=", "file_obj", ".", "tell", "(", ")", "fbytes", "=", "file_obj", ".", "read", "(", "1024", ")", "file_obj", ".", "seek", "(", "start", ")", "is_str", "=", "isinstance", "(", "fbytes", ",", ...

25.588235

0.002217

def clear_all(): """DANGER! *This command is a maintenance tool and clears the complete database.* """ sure = input("Are you sure to drop the complete database content? (Type " "in upppercase YES)") if not (sure == 'YES'): db_log('Not deleting the database.') sys.ex...

[ "def", "clear_all", "(", ")", ":", "sure", "=", "input", "(", "\"Are you sure to drop the complete database content? (Type \"", "\"in upppercase YES)\"", ")", "if", "not", "(", "sure", "==", "'YES'", ")", ":", "db_log", "(", "'Not deleting the database.'", ")", "sys",...

32.352941

0.001767

def calculate_cut_coords_by_zoom( coord, metatile_zoom, cfg_tile_sizes, max_zoom): """ Returns a map of nominal zoom to the list of cut coordinates at that nominal zoom. Note that max_zoom should be the maximum coordinate zoom, not nominal zoom. """ tile_sizes_by_zoom = calculate_s...

[ "def", "calculate_cut_coords_by_zoom", "(", "coord", ",", "metatile_zoom", ",", "cfg_tile_sizes", ",", "max_zoom", ")", ":", "tile_sizes_by_zoom", "=", "calculate_sizes_by_zoom", "(", "coord", ",", "metatile_zoom", ",", "cfg_tile_sizes", ",", "max_zoom", ")", "cut_coo...

31.913043

0.001323

def set_joint_mode(self, ids): """ Sets the specified motors to joint mode. """ self.set_control_mode(dict(zip(ids, itertools.repeat('joint'))))

[ "def", "set_joint_mode", "(", "self", ",", "ids", ")", ":", "self", ".", "set_control_mode", "(", "dict", "(", "zip", "(", "ids", ",", "itertools", ".", "repeat", "(", "'joint'", ")", ")", ")", ")" ]

52.666667

0.0125

def observe(cls, *args, **kwargs): """ Mark a method as receiving notifications. Comes in two flavours: .. method:: observe(name, **types) :noindex: A decorator living in the class. Can be applied more than once to the same method, provided the names differ. ...

[ "def", "observe", "(", "cls", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "@", "decorators", ".", "good_decorator", "def", "_decorator", "(", "_notified", ")", ":", "# marks the method with observed properties", "_list", "=", "getattr", "(", "_notifie...

39.326531

0.000506

def create_and_update_from_json_data(d, user): """ Create or update page based on python dict d loaded from JSON data. This applies all data except for redirect_to, which is done in a second pass after all pages have been imported, user is the User instance that will be used if the author can't ...

[ "def", "create_and_update_from_json_data", "(", "d", ",", "user", ")", ":", "page", "=", "None", "parent", "=", "None", "parent_required", "=", "True", "created", "=", "False", "messages", "=", "[", "]", "page_languages", "=", "set", "(", "lang", "[", "0",...

34.178571

0.002031

def _update_cache_stats(self, key, result): """ Update the cache stats. If no cache-result is specified, we iniitialize the key. Otherwise, we increment the correct cache-result. Note the behavior for expired. A client can be expired and the key still exists. ...

[ "def", "_update_cache_stats", "(", "self", ",", "key", ",", "result", ")", ":", "if", "result", "is", "None", ":", "self", ".", "_CACHE_STATS", "[", "'access_stats'", "]", ".", "setdefault", "(", "key", ",", "{", "'hit'", ":", "0", ",", "'miss'", ":", ...

37.333333

0.008711

def example_rgb_to_xyz(): """ The reverse is similar. """ print("=== RGB Example: RGB->XYZ ===") # Instantiate an Lab color object with the given values. rgb = sRGBColor(120, 130, 140) # Show a string representation. print(rgb) # Convert RGB to XYZ using a D50 illuminant. xyz = ...

[ "def", "example_rgb_to_xyz", "(", ")", ":", "print", "(", "\"=== RGB Example: RGB->XYZ ===\"", ")", "# Instantiate an Lab color object with the given values.", "rgb", "=", "sRGBColor", "(", "120", ",", "130", ",", "140", ")", "# Show a string representation.", "print", "(...

29.285714

0.002364

def delete(self, s, p, o): """Remove the given subj-pred-obj triple from the database.""" with self.walrus.atomic(): for key in self.keys_for_values(s, p, o): del self._z[key]

[ "def", "delete", "(", "self", ",", "s", ",", "p", ",", "o", ")", ":", "with", "self", ".", "walrus", ".", "atomic", "(", ")", ":", "for", "key", "in", "self", ".", "keys_for_values", "(", "s", ",", "p", ",", "o", ")", ":", "del", "self", ".",...

43

0.009132

def com_google_fonts_check_family_tnum_horizontal_metrics(fonts): """All tabular figures must have the same width across the RIBBI-family.""" from fontbakery.constants import RIBBI_STYLE_NAMES from fontTools.ttLib import TTFont RIBBI_ttFonts = [TTFont(f) for f in fonts if s...

[ "def", "com_google_fonts_check_family_tnum_horizontal_metrics", "(", "fonts", ")", ":", "from", "fontbakery", ".", "constants", "import", "RIBBI_STYLE_NAMES", "from", "fontTools", ".", "ttLib", "import", "TTFont", "RIBBI_ttFonts", "=", "[", "TTFont", "(", "f", ")", ...

38

0.010109