kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def main( gpu:Param("GPU to run on", str)=None ): """Distributed training of Imagenet. Fastest speed is if you run with: python -m fastai.launch""" path = Path('/mnt/fe2_disk/') tot_epochs,size,bs,lr = 60,224,256,3e-1 dirname = 'imagenet' gpu = setup_distrib(gpu) if gpu is None: bs *= torch.cud...	[ "def", "main", "(", "gpu", ":", "Param", "(", "\"GPU to run on\"", ",", "str", ")", "=", "None", ")", ":", "path", "=", "Path", "(", "'/mnt/fe2_disk/'", ")", "tot_epochs", ",", "size", ",", "bs", ",", "lr", "=", "60", ",", "224", ",", "256", ",", ...	39.230769	0.018495
def optimize(model,cand,obj): """optimize: function for solving the model, updating candidate solutions' list Parameters: - model: Gurobi model object - cand: list of pairs of objective functions (for appending more solutions) - obj: name of a model's variable to setup as objective R...	[ "def", "optimize", "(", "model", ",", "cand", ",", "obj", ")", ":", "# model.Params.OutputFlag = 0 # silent mode", "model", ".", "setObjective", "(", "obj", ",", "\"minimize\"", ")", "model", ".", "optimize", "(", ")", "x", ",", "y", ",", "C", ",", "U", ...	39.130435	0.019523
def cygpath(x): """ This will return the path of input arg for windows :return: the path in windows """ command = ['cygpath', '-wp', x] p = subprocess.Popen(command, stdout=subprocess.PIPE) output, _ = p.communicate() lines = output.split("\n") return lines[0]	[ "def", "cygpath", "(", "x", ")", ":", "command", "=", "[", "'cygpath'", ",", "'-wp'", ",", "x", "]", "p", "=", "subprocess", ".", "Popen", "(", "command", ",", "stdout", "=", "subprocess", ".", "PIPE", ")", "output", ",", "_", "=", "p", ".", "com...	26.9	0.02518
def _byteify(data): """Convert unicode to bytes""" # Unicode if isinstance(data, six.text_type): return data.encode("utf-8") # Members of lists if isinstance(data, list): return [_byteify(item) for item in data] # Members of dicts if isinstance(data, dict): return ...	[ "def", "_byteify", "(", "data", ")", ":", "# Unicode", "if", "isinstance", "(", "data", ",", "six", ".", "text_type", ")", ":", "return", "data", ".", "encode", "(", "\"utf-8\"", ")", "# Members of lists", "if", "isinstance", "(", "data", ",", "list", ")...	23.684211	0.002137
def extract_pos(positions, cash): """ Extract position values from backtest object as returned by get_backtest() on the Quantopian research platform. Parameters ---------- positions : pd.DataFrame timeseries containing one row per symbol (and potentially duplicate datetime indic...	[ "def", "extract_pos", "(", "positions", ",", "cash", ")", ":", "positions", "=", "positions", ".", "copy", "(", ")", "positions", "[", "'values'", "]", "=", "positions", ".", "amount", "*", "positions", ".", "last_sale_price", "cash", ".", "name", "=", "...	30.380952	0.000759
def load(filename): """Retrieve a pickled object Parameter --------- filename : path Return ------ object Unpickled object """ filename = os.path.normcase(filename) try: with open(filename, 'rb') as f: u = pickle.Unpickler(f) return u.loa...	[ "def", "load", "(", "filename", ")", ":", "filename", "=", "os", ".", "path", ".", "normcase", "(", "filename", ")", "try", ":", "with", "open", "(", "filename", ",", "'rb'", ")", "as", "f", ":", "u", "=", "pickle", ".", "Unpickler", "(", "f", ")...	21.052632	0.002392
def create_actor_polygon(pts, color, **kwargs): """ Creates a VTK actor for rendering polygons. :param pts: points :type pts: vtkFloatArray :param color: actor color :type color: list :return: a VTK actor :rtype: vtkActor """ # Keyword arguments array_name = kwargs.get('name', "...	[ "def", "create_actor_polygon", "(", "pts", ",", "color", ",", "", "", "kwargs", ")", ":", "# Keyword arguments", "array_name", "=", "kwargs", ".", "get", "(", "'name'", ",", "\"\"", ")", "array_index", "=", "kwargs", ".", "get", "(", "'index'", ",", "0...	26.673469	0.000738
def hexdump (bytes, addr=None, preamble=None, printfunc=None, stepsize=16): """hexdump(bytes[, addr[, preamble[, printfunc[, stepsize=16]]]]) Outputs bytes in hexdump format lines similar to the following (here preamble='Bank1', stepsize=8, and len(bytes) == 15):: Bank1: 0xFD020000: 7f45 4c46 0102 0100 ...	[ "def", "hexdump", "(", "bytes", ",", "addr", "=", "None", ",", "preamble", "=", "None", ",", "printfunc", "=", "None", ",", "stepsize", "=", "16", ")", ":", "if", "preamble", "is", "None", ":", "preamble", "=", "\"\"", "bytes", "=", "bytearray", "(",...	31.457143	0.011454
def topickle(table, source=None, protocol=-1, write_header=True): """ Write the table to a pickle file. E.g.:: >>> import petl as etl >>> table1 = [['foo', 'bar'], ... ['a', 1], ... ['b', 2], ... ['c', 2]] >>> etl.topickle(table1, 'e...	[ "def", "topickle", "(", "table", ",", "source", "=", "None", ",", "protocol", "=", "-", "1", ",", "write_header", "=", "True", ")", ":", "_writepickle", "(", "table", ",", "source", "=", "source", ",", "mode", "=", "'wb'", ",", "protocol", "=", "prot...	28.909091	0.002028
def complete_features(db): """ iterator returning features which are complete (have a 'gene_id' and a 'transcript_id') """ for feature in db.all_features(): gene_id = feature.attributes.get('gene_id', [None])[0] transcript_id = feature.attributes.get('transcript_id', [None])[0] ...	[ "def", "complete_features", "(", "db", ")", ":", "for", "feature", "in", "db", ".", "all_features", "(", ")", ":", "gene_id", "=", "feature", ".", "attributes", ".", "get", "(", "'gene_id'", ",", "[", "None", "]", ")", "[", "0", "]", "transcript_id", ...	40.9	0.002392
def handle_http(handler: Resource, args: Tuple, kwargs: Dict, logic: Callable): """Handle a Flask HTTP request :param handler: flask_restful.Resource: An instance of a Flask Restful resource class. :param tuple args: Any positional arguments passed to the wrapper method. :param dict kwargs: Any...	[ "def", "handle_http", "(", "handler", ":", "Resource", ",", "args", ":", "Tuple", ",", "kwargs", ":", "Dict", ",", "logic", ":", "Callable", ")", ":", "try", ":", "# We are checking mimetype here instead of content_type because", "# mimetype is just the content-type, wh...	46.473333	0.000702
def Sato_Riedel(T, M, Tb, Tc): r'''Calculate the thermal conductivity of a liquid as a function of temperature using the CSP method of Sato-Riedel [1]_, [2]_, published in Reid [3]_. Requires temperature, molecular weight, and boiling and critical temperatures. .. math:: k = \frac{1.1053}{\...	[ "def", "Sato_Riedel", "(", "T", ",", "M", ",", "Tb", ",", "Tc", ")", ":", "Tr", "=", "T", "/", "Tc", "Tbr", "=", "Tb", "/", "Tc", "return", "1.1053", "", "(", "3.", "+", "20.", "", "(", "1", "-", "Tr", ")", "**", "(", "2", "/", "3.", ...	28.711111	0.002246
def pipe(*args): """ Takes as parameters several dicts, each with the same parameters passed to popen. Runs the various processes in a pipeline, connecting the stdout of every process except the last with the stdin of the next process. Adapted from http://www.enricozini.org/2009/debian/pyt...	[ "def", "pipe", "(", "*", "args", ")", ":", "if", "len", "(", "args", ")", "<", "2", ":", "raise", "ValueError", "(", "\"pipe needs at least 2 processes\"", ")", "# Set stdout=PIPE in every subprocess except the last", "for", "i", "in", "args", "[", ":", "-", "...	31.275862	0.00107
def remove_namespaces(self, rpc_reply): """remove xmlns attributes from rpc reply""" self.__xslt=self.__transform_reply self.__parser = etree.XMLParser(remove_blank_text=True) self.__xslt_doc = etree.parse(io.BytesIO(self.__xslt), self.__parser) self.__transform = etree.XSLT(self...	[ "def", "remove_namespaces", "(", "self", ",", "rpc_reply", ")", ":", "self", ".", "__xslt", "=", "self", ".", "__transform_reply", "self", ".", "__parser", "=", "etree", ".", "XMLParser", "(", "remove_blank_text", "=", "True", ")", "self", ".", "__xslt_doc",...	56.625	0.008696
def verifyUniqueWcsname(fname,wcsname): """ Report whether or not the specified WCSNAME already exists in the file """ uniq = True numsci,extname = count_sci_extensions(fname) wnames = altwcs.wcsnames(fname,ext=(extname,1)) if wcsname in wnames.values(): uniq = False return uni...	[ "def", "verifyUniqueWcsname", "(", "fname", ",", "wcsname", ")", ":", "uniq", "=", "True", "numsci", ",", "extname", "=", "count_sci_extensions", "(", "fname", ")", "wnames", "=", "altwcs", ".", "wcsnames", "(", "fname", ",", "ext", "=", "(", "extname", ...	25.833333	0.015576
def build_response(self, request, response, from_cache=False): """ Build a response by making a request or using the cache. This will end up calling send and returning a potentially cached response """ if not from_cache and request.method == 'GET': # apply a...	[ "def", "build_response", "(", "self", ",", "request", ",", "response", ",", "from_cache", "=", "False", ")", ":", "if", "not", "from_cache", "and", "request", ".", "method", "==", "'GET'", ":", "# apply any expiration heuristics", "if", "response", ".", "statu...	38.34375	0.000795
def is_bool_matrix(l): r"""Checks if l is a 2D numpy array of bools """ if isinstance(l, np.ndarray): if l.ndim == 2 and (l.dtype == bool): return True return False	[ "def", "is_bool_matrix", "(", "l", ")", ":", "if", "isinstance", "(", "l", ",", "np", ".", "ndarray", ")", ":", "if", "l", ".", "ndim", "==", "2", "and", "(", "l", ".", "dtype", "==", "bool", ")", ":", "return", "True", "return", "False" ]	24.25	0.00995
async def main_loop(loop, password, user, ip): # pylint: disable=invalid-name """Main loop.""" async with aiohttp.ClientSession(loop=loop) as session: VAR['sma'] = pysma.SMA(session, ip, password=password, group=user) await VAR['sma'].new_session() if VAR['sma'].sma_sid is None: ...	[ "async", "def", "main_loop", "(", "loop", ",", "password", ",", "user", ",", "ip", ")", ":", "# pylint: disable=invalid-name", "async", "with", "aiohttp", ".", "ClientSession", "(", "loop", "=", "loop", ")", "as", "session", ":", "VAR", "[", "'sma'", "]", ...	32.347826	0.001305
def table(self, snrthresh=5.5): """Represent this `QPlane` as an `EventTable` Parameters ---------- snrthresh : `float`, optional lower inclusive threshold on individual tile SNR to keep in the table, default: 5.5 Returns ------- out : `~...	[ "def", "table", "(", "self", ",", "snrthresh", "=", "5.5", ")", ":", "from", ".", ".", "table", "import", "EventTable", "# get plane properties", "freqs", "=", "self", ".", "plane", ".", "frequencies", "bws", "=", "2", "*", "(", "freqs", "-", "self", "...	37.75	0.001291
def delete(self, features, make_backup=True, **kwargs): """ Delete features from database. features : str, iterable, FeatureDB instance If FeatureDB, all features will be used. If string, assume it's the ID of the feature to remove. Otherwise, assume it's an iterable of ...	[ "def", "delete", "(", "self", ",", "features", ",", "make_backup", "=", "True", ",", "", "", "kwargs", ")", ":", "if", "make_backup", ":", "if", "isinstance", "(", "self", ".", "dbfn", ",", "six", ".", "string_types", ")", ":", "shutil", ".", "copy...	34.8	0.001242
def QA_util_time_gap(time, gap, methods, type_): '分钟线回测的时候的gap' min_len = int(240 / int(str(type_).split('min')[0])) day_gap = math.ceil(gap / min_len) if methods in ['>', 'gt']: data = pd.concat( [ pd.DataFrame(QA_util_make_min_index(day, ...	[ "def", "QA_util_time_gap", "(", "time", ",", "gap", ",", "methods", ",", "type_", ")", ":", "min_len", "=", "int", "(", "240", "/", "int", "(", "str", "(", "type_", ")", ".", "split", "(", "'min'", ")", "[", "0", "]", ")", ")", "day_gap", "=", ...	37.648936	0.000275
def get(self): """ Retrieve options set by user.""" return {k:v for k,v in list(self.options.items()) if k in self._allowed_axes}	[ "def", "get", "(", "self", ")", ":", "return", "{", "k", ":", "v", "for", "k", ",", "v", "in", "list", "(", "self", ".", "options", ".", "items", "(", ")", ")", "if", "k", "in", "self", ".", "_allowed_axes", "}" ]	47.666667	0.034483
def recognise(self, string, line_num): """ Splits the string into chars and distributes these into the buckets of IPA and non-IPA symbols. Expects that there are no precomposed chars in the string. """ symbols = [] unknown = [] for char in string: if char == SPACE: continue try: name = u...	[ "def", "recognise", "(", "self", ",", "string", ",", "line_num", ")", ":", "symbols", "=", "[", "]", "unknown", "=", "[", "]", "for", "char", "in", "string", ":", "if", "char", "==", "SPACE", ":", "continue", "try", ":", "name", "=", "unicodedata", ...	24.857143	0.034578
def remove_attr(self, attr_name): """ Remove cookie attribute. Cookie attribute couldn't be removed if cookie is in read-only mode (RuntimeError exception is raised). :param attr_name: name of attribute to remove :return: None """ if self.__ro_flag: raise RuntimeError('Read-only cookie changing attempt'...	[ "def", "remove_attr", "(", "self", ",", "attr_name", ")", ":", "if", "self", ".", "__ro_flag", ":", "raise", "RuntimeError", "(", "'Read-only cookie changing attempt'", ")", "name", "=", "self", ".", "__attr_name", "(", "attr_name", ")", "if", "name", "in", ...	34.333333	0.030733
def setupQuery(self, query, op, editor): """ Sets up the query for this editor. """ if editor is not None: value = editor.currentRecord() if value is None: return False return super(ForeignKeyPlugin, self).setupQuery(query...	[ "def", "setupQuery", "(", "self", ",", "query", ",", "op", ",", "editor", ")", ":", "if", "editor", "is", "not", "None", ":", "value", "=", "editor", ".", "currentRecord", "(", ")", "if", "value", "is", "None", ":", "return", "False", "return", "supe...	32.4	0.009009
def draw_nodes(self): """ Renders nodes to the figure. """ node_r = self.nodeprops["radius"] lw = self.nodeprops["linewidth"] for i, node in enumerate(self.nodes): x = self.node_coords["x"][i] y = self.node_coords["y"][i] color = self.n...	[ "def", "draw_nodes", "(", "self", ")", ":", "node_r", "=", "self", ".", "nodeprops", "[", "\"radius\"", "]", "lw", "=", "self", ".", "nodeprops", "[", "\"linewidth\"", "]", "for", "i", ",", "node", "in", "enumerate", "(", "self", ".", "nodes", ")", "...	36.381579	0.000704
def main(): """Create an organization, print out its attributes and delete it.""" server_config = ServerConfig( auth=('admin', 'changeme'), # Use these credentials… url='https://sat1.example.com', # …to talk to this server. ) org = Organization(server_config, name='junk org').creat...	[ "def", "main", "(", ")", ":", "server_config", "=", "ServerConfig", "(", "auth", "=", "(", "'admin'", ",", "'changeme'", ")", ",", "# Use these credentials…", "url", "=", "'https://sat1.example.com'", ",", "# …to talk to this server.", ")", "org", "=", "Organizati...	43.666667	0.002494
def write_to_file(self, file_path='', date=str(datetime.date.today()), organization='N/A', members=0, teams=0): """ Writes the current organization information to file (csv). """ self.checkDir(file_path) with open(file_path, 'w+') as output: output.write('date...	[ "def", "write_to_file", "(", "self", ",", "file_path", "=", "''", ",", "date", "=", "str", "(", "datetime", ".", "date", ".", "today", "(", ")", ")", ",", "organization", "=", "'N/A'", ",", "members", "=", "0", ",", "teams", "=", "0", ")", ":", "...	58.564103	0.009044
def default_stream_factory( total_content_length, filename, content_type, content_length=None ): """The stream factory that is used per default.""" max_size = 1024 * 500 if SpooledTemporaryFile is not None: return SpooledTemporaryFile(max_size=max_size, mode="wb+") if total_content_length is...	[ "def", "default_stream_factory", "(", "total_content_length", ",", "filename", ",", "content_type", ",", "content_length", "=", "None", ")", ":", "max_size", "=", "1024", "*", "500", "if", "SpooledTemporaryFile", "is", "not", "None", ":", "return", "SpooledTempora...	40.9	0.002392
def walknset_vars(self, task_class=None, args, *kwargs): """ Set the values of the ABINIT variables in the input files of the nodes Args: task_class: If not None, only the input files of the tasks belonging to class `task_class` are modified. Example: ...	[ "def", "walknset_vars", "(", "self", ",", "task_class", "=", "None", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "def", "change_task", "(", "task", ")", ":", "if", "task_class", "is", "not", "None", "and", "task", ".", "__class__", "is", "no...	33.714286	0.009269
def get_linearoperator(shape, A, timer=None): """Enhances aslinearoperator if A is None.""" ret = None import scipy.sparse.linalg as scipylinalg if isinstance(A, LinearOperator): ret = A elif A is None: ret = IdentityLinearOperator(shape) elif isinstance(A, numpy.ndarray) or issp...	[ "def", "get_linearoperator", "(", "shape", ",", "A", ",", "timer", "=", "None", ")", ":", "ret", "=", "None", "import", "scipy", ".", "sparse", ".", "linalg", "as", "scipylinalg", "if", "isinstance", "(", "A", ",", "LinearOperator", ")", ":", "ret", "=...	35.833333	0.000906
def assignGroup(self, action): """ Assigns the group for the given action to the current view. :param action \| <QAction> """ grp = unwrapVariant(action.data()) view = self._currentPanel.currentView() view.setViewingGroup(grp)	[ "def", "assignGroup", "(", "self", ",", "action", ")", ":", "grp", "=", "unwrapVariant", "(", "action", ".", "data", "(", ")", ")", "view", "=", "self", ".", "_currentPanel", ".", "currentView", "(", ")", "view", ".", "setViewingGroup", "(", "grp", ")"...	32	0.013514
def executions(self) -> List[Execution]: """ List of all executions from this session. """ return list(fill.execution for fill in self.wrapper.fills.values())	[ "def", "executions", "(", "self", ")", "->", "List", "[", "Execution", "]", ":", "return", "list", "(", "fill", ".", "execution", "for", "fill", "in", "self", ".", "wrapper", ".", "fills", ".", "values", "(", ")", ")" ]	37.2	0.010526
def _lonlat_from_geos_angle(x, y, geos_area): """Get lons and lats from x, y in projection coordinates.""" h = (geos_area.proj_dict['h'] + geos_area.proj_dict['a']) / 1000 b__ = (geos_area.proj_dict['a'] / geos_area.proj_dict['b']) ** 2 sd = np.sqrt((h * np.cos(x) * np.cos(y)) ** 2 - (...	[ "def", "_lonlat_from_geos_angle", "(", "x", ",", "y", ",", "geos_area", ")", ":", "h", "=", "(", "geos_area", ".", "proj_dict", "[", "'h'", "]", "+", "geos_area", ".", "proj_dict", "[", "'a'", "]", ")", "/", "1000", "b__", "=", "(", "geos_area", ".",...	39.15	0.001247
def handle_tags(repo, kwargs): """:return: repo.tags()""" log.info('tags: %s %s' %(repo, kwargs)) return [str(t) for t in repo.tags(kwargs)]	[ "def", "handle_tags", "(", "repo", ",", "", "", "kwargs", ")", ":", "log", ".", "info", "(", "'tags: %s %s'", "%", "(", "repo", ",", "kwargs", ")", ")", "return", "[", "str", "(", "t", ")", "for", "t", "in", "repo", ".", "tags", "(", "", ""...	38.25	0.012821
def _draw_text(self, pos, text, font, **kw): """ Remember a single drawable tuple to paint later. """ self.drawables.append((pos, text, font, kw))	[ "def", "_draw_text", "(", "self", ",", "pos", ",", "text", ",", "font", ",", "", "", "kw", ")", ":", "self", ".", "drawables", ".", "append", "(", "(", "pos", ",", "text", ",", "font", ",", "kw", ")", ")" ]	34.8	0.011236
def _connect(self): """Connects to the manager.""" cls = self._get_manager_class(register_callables=False) ins = cls(address=self.addr, authkey=self.authkey) ins.connect() return ins	[ "def", "_connect", "(", "self", ")", ":", "cls", "=", "self", ".", "_get_manager_class", "(", "register_callables", "=", "False", ")", "ins", "=", "cls", "(", "address", "=", "self", ".", "addr", ",", "authkey", "=", "self", ".", "authkey", ")", "ins",...	36.166667	0.009009
def calcDeviationLimits(value, tolerance, mode): """Returns the upper and lower deviation limits for a value and a given tolerance, either as relative or a absolute difference. :param value: can be a single value or a list of values if a list of values is given, the minimal value will be used to ca...	[ "def", "calcDeviationLimits", "(", "value", ",", "tolerance", ",", "mode", ")", ":", "values", "=", "toList", "(", "value", ")", "if", "mode", "==", "'relative'", ":", "lowerLimit", "=", "min", "(", "values", ")", "*", "(", "1", "-", "tolerance", ")", ...	45.809524	0.002037
def _actionsFreqsAngles(self,args,*kwargs): """ NAME: actionsFreqsAngles (_actionsFreqsAngles) PURPOSE: evaluate the actions, frequencies, and angles (jr,lz,jz,Omegar,Omegaphi,Omegaz,angler,anglephi,anglez) INPUT: Either: a) R,vR,vT,z,vz[,...	[ "def", "_actionsFreqsAngles", "(", "self", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "if", "len", "(", "args", ")", "==", "5", ":", "#R,vR.vT, z, vz pragma: no cover", "raise", "IOError", "(", "\"You need to provide phi when calculating angles\"", ")", ...	40.309091	0.024873
def _preprocess_yml(path): """Dynamically create PY3 version of the file by re-writing 'unicode' to 'str'.""" with open(path) as f: tmp_yaml = f.read() return re.sub(r"unicode", "str", tmp_yaml)	[ "def", "_preprocess_yml", "(", "path", ")", ":", "with", "open", "(", "path", ")", "as", "f", ":", "tmp_yaml", "=", "f", ".", "read", "(", ")", "return", "re", ".", "sub", "(", "r\"unicode\"", ",", "\"str\"", ",", "tmp_yaml", ")" ]	42	0.009346
def element_contains(self, element_id, value): """ Assert provided content is contained within an element found by ``id``. """ elements = ElementSelector( world.browser, str('id("{id}")[contains(., "{value}")]'.format( id=element_id, value=value)), filter_displayed=T...	[ "def", "element_contains", "(", "self", ",", "element_id", ",", "value", ")", ":", "elements", "=", "ElementSelector", "(", "world", ".", "browser", ",", "str", "(", "'id(\"{id}\")[contains(., \"{value}\")]'", ".", "format", "(", "id", "=", "element_id", ",", ...	30.692308	0.002433
def runSearchRequest( self, requestStr, requestClass, responseClass, objectGenerator): """ Runs the specified request. The request is a string containing a JSON representation of an instance of the specified requestClass. We return a string representation of an instance of th...	[ "def", "runSearchRequest", "(", "self", ",", "requestStr", ",", "requestClass", ",", "responseClass", ",", "objectGenerator", ")", ":", "self", ".", "startProfile", "(", ")", "try", ":", "request", "=", "protocol", ".", "fromJson", "(", "requestStr", ",", "r...	49.4375	0.00124
def check_missing_references(client): """Find missing references.""" from renku.models.refs import LinkReference missing = [ ref for ref in LinkReference.iter_items(client) if not ref.reference.exists() ] if not missing: return True click.secho( WARNING + 'Ther...	[ "def", "check_missing_references", "(", "client", ")", ":", "from", "renku", ".", "models", ".", "refs", "import", "LinkReference", "missing", "=", "[", "ref", "for", "ref", "in", "LinkReference", ".", "iter_items", "(", "client", ")", "if", "not", "ref", ...	28.8	0.001681
def setup(self, universe): """ Setup Security with universe. Speeds up future runs. Args: * universe (DataFrame): DataFrame of prices with security's name as one of the columns. """ # if we already have all the prices, we will store them to speed up ...	[ "def", "setup", "(", "self", ",", "universe", ")", ":", "# if we already have all the prices, we will store them to speed up", "# future updates", "try", ":", "prices", "=", "universe", "[", "self", ".", "name", "]", "except", "KeyError", ":", "prices", "=", "None",...	32.714286	0.001696
def unlock(): ''' Unlocks the candidate configuration. CLI Example: .. code-block:: bash salt 'device_name' junos.unlock ''' conn = __proxy__['junos.conn']() ret = {} ret['out'] = True try: conn.cu.unlock() ret['message'] = "Successfully unlocked the config...	[ "def", "unlock", "(", ")", ":", "conn", "=", "__proxy__", "[", "'junos.conn'", "]", "(", ")", "ret", "=", "{", "}", "ret", "[", "'out'", "]", "=", "True", "try", ":", "conn", ".", "cu", ".", "unlock", "(", ")", "ret", "[", "'message'", "]", "="...	23.363636	0.001869
def plot(self, label=None, colour='g', style='-'): # pragma: no cover '''Plot the time series.''' pylab = LazyImport.pylab() pylab.plot(self.dates, self.values, '%s%s' % (colour, style), label=label) if label is not None: pylab.legend() pylab.show()	[ "def", "plot", "(", "self", ",", "label", "=", "None", ",", "colour", "=", "'g'", ",", "style", "=", "'-'", ")", ":", "# pragma: no cover", "pylab", "=", "LazyImport", ".", "pylab", "(", ")", "pylab", ".", "plot", "(", "self", ".", "dates", ",", "s...	42.142857	0.013289
def compute_implicit_line(nodes): """Compute the implicit form of the line connecting curve endpoints. .. note:: This assumes, but does not check, that the first and last nodes in ``nodes`` are different. Computes :math:`a, b` and :math:`c` in the normalized implicit equation for the li...	[ "def", "compute_implicit_line", "(", "nodes", ")", ":", "delta", "=", "nodes", "[", ":", ",", "-", "1", "]", "-", "nodes", "[", ":", ",", "0", "]", "length", "=", "np", ".", "linalg", ".", "norm", "(", "delta", ",", "ord", "=", "2", ")", "# Nor...	31.184211	0.000818
def validate_config_json(pjson): """Takes the parsed JSON (output from json.load) from a configuration file and checks it for common errors.""" # Make sure that the root json is a dict if type(pjson) is not dict: raise ParseError("Configuration file should contain a single J...	[ "def", "validate_config_json", "(", "pjson", ")", ":", "# Make sure that the root json is a dict", "if", "type", "(", "pjson", ")", "is", "not", "dict", ":", "raise", "ParseError", "(", "\"Configuration file should contain a single JSON object/dictionary. Instead got a %s.\"", ...	48.0625	0.008286
def anneal(self): """Minimizes the energy of a system by simulated annealing. Parameters state : an initial arrangement of the system Returns (state, energy): the best state and energy found. """ step = 0 self.start = time.time() # Precompute fa...	[ "def", "anneal", "(", "self", ")", ":", "step", "=", "0", "self", ".", "start", "=", "time", ".", "time", "(", ")", "# Precompute factor for exponential cooling from Tmax to Tmin", "if", "self", ".", "Tmin", "<=", "0.0", ":", "raise", "Exception", "(", "'Exp...	35.828125	0.001273
def write_networks(folder, network_table, networks): """ Writing networkTable, nodes and edges to Perseus readable format. :param folder: Path to output directory. :param network_table: Network table. :param networks: Dictionary with node and edge tables, indexed by network guid. """ ma...	[ "def", "write_networks", "(", "folder", ",", "network_table", ",", "networks", ")", ":", "makedirs", "(", "folder", ",", "exist_ok", "=", "True", ")", "network_table", ".", "to_perseus", "(", "path", ".", "join", "(", "folder", ",", "'networks.txt'", ")", ...	51.846154	0.010204
def result_cached(task_id, wait=0, broker=None): """ Return the result from the cache backend """ if not broker: broker = get_broker() start = time() while True: r = broker.cache.get('{}:{}'.format(broker.list_key, task_id)) if r: return SignedPackage.loads(r...	[ "def", "result_cached", "(", "task_id", ",", "wait", "=", "0", ",", "broker", "=", "None", ")", ":", "if", "not", "broker", ":", "broker", "=", "get_broker", "(", ")", "start", "=", "time", "(", ")", "while", "True", ":", "r", "=", "broker", ".", ...	28.928571	0.002392
def url_decode(s, charset='utf-8', decode_keys=False, include_empty=True, errors='replace', separator='&', cls=None): """ Parse a querystring and return it as :class:`MultiDict`. There is a difference in key decoding on different Python versions. On Python 3 keys will always be fully de...	[ "def", "url_decode", "(", "s", ",", "charset", "=", "'utf-8'", ",", "decode_keys", "=", "False", ",", "include_empty", "=", "True", ",", "errors", "=", "'replace'", ",", "separator", "=", "'&'", ",", "cls", "=", "None", ")", ":", "if", "cls", "is", "...	51.208333	0.000399
def parse_skewer_log(self, f): """ Go through log file looking for skewer output """ fh = f['f'] regexes = { 'fq1': "Input file:\s+(.+)", 'fq2': "Paired file:\s+(.+)", 'r_processed': "(\d+) read\|reads pairs? processed", 'r_short_filtered': "(\d+) \...	[ "def", "parse_skewer_log", "(", "self", ",", "f", ")", ":", "fh", "=", "f", "[", "'f'", "]", "regexes", "=", "{", "'fq1'", ":", "\"Input file:\\s+(.+)\"", ",", "'fq2'", ":", "\"Paired file:\\s+(.+)\"", ",", "'r_processed'", ":", "\"(\\d+) read\|reads pairs? proce...	41.183673	0.021781
def save(self, key, data): """ Save data associated with key. """ self._db[key] = json.dumps(data) self._db.sync()	[ "def", "save", "(", "self", ",", "key", ",", "data", ")", ":", "self", ".", "_db", "[", "key", "]", "=", "json", ".", "dumps", "(", "data", ")", "self", ".", "_db", ".", "sync", "(", ")" ]	28.4	0.013699
def get_value(self, source): """Apply self.convert to the source. The parameter passed to convert depends on self.source_name. If source_name is given, self.convert(getattr(source, source_name)) is called, otherwise self.convert(source) is called. """ if self.source_name is None: present, valu...	[ "def", "get_value", "(", "self", ",", "source", ")", ":", "if", "self", ".", "source_name", "is", "None", ":", "present", ",", "value", "=", "True", ",", "self", ".", "convert", "(", "source", ")", "converted", "=", "True", "else", ":", "present", ",...	31.590909	0.015363
def get(filepath): """ Return (width, height) for a given img file content no requirements """ height = -1 width = -1 with open(filepath, 'rb') as fhandle: head = fhandle.read(24) size = len(head) # handle GIFs if size >= 10 and head[:6] in (b'GIF87a', b'GIF8...	[ "def", "get", "(", "filepath", ")", ":", "height", "=", "-", "1", "width", "=", "-", "1", "with", "open", "(", "filepath", ",", "'rb'", ")", "as", "fhandle", ":", "head", "=", "fhandle", ".", "read", "(", "24", ")", "size", "=", "len", "(", "he...	43.783505	0.002072
def add_gate_option_group(parser): """Adds the options needed to apply gates to data. Parameters ---------- parser : object ArgumentParser instance. """ gate_group = parser.add_argument_group("Options for gating data.") gate_group.add_argument("--gate", nargs="+", type=str, ...	[ "def", "add_gate_option_group", "(", "parser", ")", ":", "gate_group", "=", "parser", ".", "add_argument_group", "(", "\"Options for gating data.\"", ")", "gate_group", ".", "add_argument", "(", "\"--gate\"", ",", "nargs", "=", "\"+\"", ",", "type", "=", "str", ...	49.076923	0.000769
def rotation(self): """Rotation of device Returns: int (0-3) """ rs = dict(PORTRAIT=0, LANDSCAPE=1, UIA_DEVICE_ORIENTATION_LANDSCAPERIGHT=3) return rs.get(self.session.orientation, 0)	[ "def", "rotation", "(", "self", ")", ":", "rs", "=", "dict", "(", "PORTRAIT", "=", "0", ",", "LANDSCAPE", "=", "1", ",", "UIA_DEVICE_ORIENTATION_LANDSCAPERIGHT", "=", "3", ")", "return", "rs", ".", "get", "(", "self", ".", "session", ".", "orientation", ...	32.714286	0.012766
def _syllabifyPhones(phoneList, syllableList): ''' Given a phone list and a syllable list, syllabify the phones Typically used by findBestSyllabification which first aligns the phoneList with a dictionary phoneList and then uses the dictionary syllabification to syllabify the input phoneList. ...	[ "def", "_syllabifyPhones", "(", "phoneList", ",", "syllableList", ")", ":", "numPhoneList", "=", "[", "len", "(", "syllable", ")", "for", "syllable", "in", "syllableList", "]", "start", "=", "0", "syllabifiedList", "=", "[", "]", "for", "end", "in", "numPh...	28.952381	0.011146
def sync_allocations(self): """ Synchronize vxlan_allocations table with configured tunnel ranges. """ # determine current configured allocatable vnis vxlan_vnis = set() for tun_min, tun_max in self.tunnel_ranges: vxlan_vnis \|= set(six.moves.range(tun_min, tu...	[ "def", "sync_allocations", "(", "self", ")", ":", "# determine current configured allocatable vnis", "vxlan_vnis", "=", "set", "(", ")", "for", "tun_min", ",", "tun_max", "in", "self", ".", "tunnel_ranges", ":", "vxlan_vnis", "\|=", "set", "(", "six", ".", "moves...	50.785714	0.00092
def _create_minion_object(self, opts, timeout, safe, io_loop=None, loaded_base_name=None, jid_queue=None): ''' Helper function to return the correct type of object ''' return Minion(opts, timeout, ...	[ "def", "_create_minion_object", "(", "self", ",", "opts", ",", "timeout", ",", "safe", ",", "io_loop", "=", "None", ",", "loaded_base_name", "=", "None", ",", "jid_queue", "=", "None", ")", ":", "return", "Minion", "(", "opts", ",", "timeout", ",", "safe...	38.833333	0.008386
def optimize_seq_and_branch_len(self,reuse_branch_len=True, prune_short=True, marginal_sequences=False, branch_length_mode='joint', max_iter=5, infer_gtr=False, **kwargs): """ Iteratively set branch lengths and reconstruct ancestral...	[ "def", "optimize_seq_and_branch_len", "(", "self", ",", "reuse_branch_len", "=", "True", ",", "prune_short", "=", "True", ",", "marginal_sequences", "=", "False", ",", "branch_length_mode", "=", "'joint'", ",", "max_iter", "=", "5", ",", "infer_gtr", "=", "False...	48.064935	0.009267
def loaded_frame(self, tag): """Deprecated; use the add method.""" # turn 2.2 into 2.3/2.4 tags if len(type(tag).__name__) == 3: tag = type(tag).__base__(tag) self[tag.HashKey] = tag	[ "def", "loaded_frame", "(", "self", ",", "tag", ")", ":", "# turn 2.2 into 2.3/2.4 tags", "if", "len", "(", "type", "(", "tag", ")", ".", "__name__", ")", "==", "3", ":", "tag", "=", "type", "(", "tag", ")", ".", "__base__", "(", "tag", ")", "self", ...	36.833333	0.00885
def response(self, payload): """ Send a response to the previously received challenge, with the given `payload`. The payload is encoded using base64 and transmitted to the server. Return the next state of the state machine as tuple (see :class:`SASLStateMachine` for deta...	[ "def", "response", "(", "self", ",", "payload", ")", ":", "if", "self", ".", "_state", "==", "SASLState", ".", "SUCCESS_SIMULATE_CHALLENGE", ":", "if", "payload", "!=", "b\"\"", ":", "# XXX: either our mechanism is buggy or the server", "# sent SASLState.SUCCESS before ...	41.26087	0.001544
def _join(*args): """Join S3 bucket args together. Remove empty entries and strip left-leading ``/`` """ return delimiter.join(filter(lambda s: s != '', map(lambda s: s.lstrip(delimiter), args)))	[ "def", "_join", "(", "*", "args", ")", ":", "return", "delimiter", ".", "join", "(", "filter", "(", "lambda", "s", ":", "s", "!=", "''", ",", "map", "(", "lambda", "s", ":", "s", ".", "lstrip", "(", "delimiter", ")", ",", "args", ")", ")", ")" ...	34.5	0.009434
def jpegtran(ext_args): """Create argument list for jpegtran.""" args = copy.copy(_JPEGTRAN_ARGS) if Settings.destroy_metadata: args += ["-copy", "none"] else: args += ["-copy", "all"] if Settings.jpegtran_prog: args += ["-progressive"] args += ['-outfile'] args += [e...	[ "def", "jpegtran", "(", "ext_args", ")", ":", "args", "=", "copy", ".", "copy", "(", "_JPEGTRAN_ARGS", ")", "if", "Settings", ".", "destroy_metadata", ":", "args", "+=", "[", "\"-copy\"", ",", "\"none\"", "]", "else", ":", "args", "+=", "[", "\"-copy\"",...	30.846154	0.002421
def _filter_meta_data(self, source, soup, data, url=None): """This method filters the web page content for meta tags that match patterns given in the ``FILTER_MAPS`` :param source: The key of the meta dictionary in ``FILTER_MAPS['meta']`` :type source: string :param soup: BeautifulSoup ...	[ "def", "_filter_meta_data", "(", "self", ",", "source", ",", "soup", ",", "data", ",", "url", "=", "None", ")", ":", "meta", "=", "FILTER_MAPS", "[", "'meta'", "]", "[", "source", "]", "meta_map", "=", "meta", "[", "'map'", "]", "html", "=", "soup", ...	38.887097	0.002427
def update_beliefs(self, corpus_id): """Return updated belief scores for a given corpus. Parameters ---------- corpus_id : str The ID of the corpus for which beliefs are to be updated. Returns ------- dict A dictionary of belief scores wi...	[ "def", "update_beliefs", "(", "self", ",", "corpus_id", ")", ":", "corpus", "=", "self", ".", "get_corpus", "(", "corpus_id", ")", "be", "=", "BeliefEngine", "(", "self", ".", "scorer", ")", "stmts", "=", "list", "(", "corpus", ".", "statements", ".", ...	35.333333	0.002041
def query(self, collection, query, request_handler='select', **kwargs): """ :param str collection: The name of the collection for the request :param str request_handler: Request handler, default is 'select' :param dict query: Python dictonary of Solr query parameters. Sends a qu...	[ "def", "query", "(", "self", ",", "collection", ",", "query", ",", "request_handler", "=", "'select'", ",", "", "", "kwargs", ")", ":", "for", "field", "in", "[", "'facet.pivot'", "]", ":", "if", "field", "in", "query", ".", "keys", "(", ")", ":", ...	43.210526	0.001787
def get_description(self, lang=None): """ Get the DC description of the object :param lang: Lang to retrieve :return: Description string representation :rtype: Literal """ return self.metadata.get_single(key=RDF_NAMESPACES.CTS.description, lang=lang)	[ "def", "get_description", "(", "self", ",", "lang", "=", "None", ")", ":", "return", "self", ".", "metadata", ".", "get_single", "(", "key", "=", "RDF_NAMESPACES", ".", "CTS", ".", "description", ",", "lang", "=", "lang", ")" ]	36.5	0.010033
def commands(self): """ Returns a list of commands that are supported by the motor controller. Possible values are `run-forever`, `run-to-abs-pos`, `run-to-rel-pos`, `run-timed`, `run-direct`, `stop` and `reset`. Not all commands may be supported. - `run-forever` will cause the ...	[ "def", "commands", "(", "self", ")", ":", "(", "self", ".", "_commands", ",", "value", ")", "=", "self", ".", "get_cached_attr_set", "(", "self", ".", "_commands", ",", "'commands'", ")", "return", "value" ]	64.5	0.009548
def addAction(self, action): """ Register Custom Action """ self.ACTIONS.append(action) return "ACTION#{}".format(len(self.ACTIONS) - 1)	[ "def", "addAction", "(", "self", ",", "action", ")", ":", "self", ".", "ACTIONS", ".", "append", "(", "action", ")", "return", "\"ACTION#{}\"", ".", "format", "(", "len", "(", "self", ".", "ACTIONS", ")", "-", "1", ")" ]	39.25	0.0125
def parse_substitution_from_list(list_rep): """ Parse a substitution from the list representation in the config file. """ # We are expecting [pattern, replacement [, is_multiline]] if type(list_rep) is not list: raise SyntaxError('Substitution must be a list') if len(list_rep) < 2: ...	[ "def", "parse_substitution_from_list", "(", "list_rep", ")", ":", "# We are expecting [pattern, replacement [, is_multiline]]", "if", "type", "(", "list_rep", ")", "is", "not", "list", ":", "raise", "SyntaxError", "(", "'Substitution must be a list'", ")", "if", "len", ...	34.363636	0.001287
def read_dataset(ctx, dataset, output): """Read the attributes of a dataset. Prints a JSON object containing the attributes of a dataset. The attributes: owner (a Mapbox account), id (dataset id), created (Unix timestamp), modified (timestamp), name (string), and description (string). $ ma...	[ "def", "read_dataset", "(", "ctx", ",", "dataset", ",", "output", ")", ":", "stdout", "=", "click", ".", "open_file", "(", "output", ",", "'w'", ")", "service", "=", "ctx", ".", "obj", ".", "get", "(", "'service'", ")", "res", "=", "service", ".", ...	32.863636	0.001344
def diff(var, key): '''calculate differences between values''' global last_diff ret = 0 if not key in last_diff: last_diff[key] = var return 0 ret = var - last_diff[key] last_diff[key] = var return ret	[ "def", "diff", "(", "var", ",", "key", ")", ":", "global", "last_diff", "ret", "=", "0", "if", "not", "key", "in", "last_diff", ":", "last_diff", "[", "key", "]", "=", "var", "return", "0", "ret", "=", "var", "-", "last_diff", "[", "key", "]", "l...	23.6	0.008163
def lookupRecords(self, record): """ Lookups records based on the inputed record. This will use the tableLookupIndex property to determine the Orb Index method to use to look up records. That index method should take the inputed record as an argument, and return a list of...	[ "def", "lookupRecords", "(", "self", ",", "record", ")", ":", "table_type", "=", "self", ".", "tableType", "(", ")", "if", "not", "table_type", ":", "return", "index", "=", "getattr", "(", "table_type", ",", "self", ".", "tableLookupIndex", "(", ")", ","...	35.277778	0.009202
def _from_python(self, value): """ Converts python values to a form suitable for insertion into the xml we send to solr. """ if hasattr(value, 'strftime'): if hasattr(value, 'hour'): offset = value.utcoffset() if offset: ...	[ "def", "_from_python", "(", "self", ",", "value", ")", ":", "if", "hasattr", "(", "value", ",", "'strftime'", ")", ":", "if", "hasattr", "(", "value", ",", "'hour'", ")", ":", "offset", "=", "value", ".", "utcoffset", "(", ")", "if", "offset", ":", ...	33.322581	0.001881
def unlike(self): """ Unlike a clip. """ r = requests.delete( "https://kippt.com/api/clips/%s/likes" % (self.id), headers=self.kippt.header) return (r.json())	[ "def", "unlike", "(", "self", ")", ":", "r", "=", "requests", ".", "delete", "(", "\"https://kippt.com/api/clips/%s/likes\"", "%", "(", "self", ".", "id", ")", ",", "headers", "=", "self", ".", "kippt", ".", "header", ")", "return", "(", "r", ".", "jso...	26	0.009302
def spitOutLines(lines, file, expand=False): r"""Write all the `lines` to `file` (which can be a string/unicode or a file handler).""" file = _normalizeToFile(file, mode="w", expand=expand) try: file.writelines(lines) finally: file.close()	[ "def", "spitOutLines", "(", "lines", ",", "file", ",", "expand", "=", "False", ")", ":", "file", "=", "_normalizeToFile", "(", "file", ",", "mode", "=", "\"w\"", ",", "expand", "=", "expand", ")", "try", ":", "file", ".", "writelines", "(", "lines", ...	43.5	0.011278
def add_namespace(self, ns_prefix, ns_uri): ''' preferred method is to instantiate with repository under 'context', but prefixes / namespaces can be added for a Resource instance adds to self.rdf.prefixes which will endure through create/update/refresh, and get added back to parsed graph namespaces Args:...	[ "def", "add_namespace", "(", "self", ",", "ns_prefix", ",", "ns_uri", ")", ":", "# add to prefixes", "setattr", "(", "self", ".", "rdf", ".", "prefixes", ",", "ns_prefix", ",", "rdflib", ".", "Namespace", "(", "ns_uri", ")", ")", "# bind to graph", "self", ...	35.954545	0.023399
def __prepare(self): """Update database with existing devices""" self.log.debug("prepare") if self.__phase > 0: raise RuntimeError("Internal error: Can only prepare in phase 0") server_instance = self.server_instance db = Database() # get list of server dev...	[ "def", "__prepare", "(", "self", ")", ":", "self", ".", "log", ".", "debug", "(", "\"prepare\"", ")", "if", "self", ".", "__phase", ">", "0", ":", "raise", "RuntimeError", "(", "\"Internal error: Can only prepare in phase 0\"", ")", "server_instance", "=", "se...	35.76	0.001451
def set_managing_editor(self): """Parses managing editor and set value""" try: self.managing_editor = self.soup.find('managingeditor').string except AttributeError: self.managing_editor = None	[ "def", "set_managing_editor", "(", "self", ")", ":", "try", ":", "self", ".", "managing_editor", "=", "self", ".", "soup", ".", "find", "(", "'managingeditor'", ")", ".", "string", "except", "AttributeError", ":", "self", ".", "managing_editor", "=", "None" ...	39.166667	0.008333
def allow_create(function): """ Decorate the `form_valid` method in a Create/Update class to create new values if necessary. .. warning:: Make sure that this decorator only decorates the ``form_valid()`` method and only this one. """ @wraps(function) def _wrapped_f...	[ "def", "allow_create", "(", "function", ")", ":", "@", "wraps", "(", "function", ")", "def", "_wrapped_func", "(", "", "args", ",", "", "*", "kwargs", ")", ":", "form", "=", "args", "[", "0", "]", "# If this argument is not a form, there are a lot of chances...	36.967742	0.00085
def _flux_engine_data(engine): """ Return rTorrent data set for pushing to InfluxDB. """ data = stats.engine_data(engine) # Make it flat data["up_rate"] = data["upload"][0] data["up_limit"] = data["upload"][1] data["down_rate"] = data["download"][0] data["down_limit"] = data["download"]...	[ "def", "_flux_engine_data", "(", "engine", ")", ":", "data", "=", "stats", ".", "engine_data", "(", "engine", ")", "# Make it flat", "data", "[", "\"up_rate\"", "]", "=", "data", "[", "\"upload\"", "]", "[", "0", "]", "data", "[", "\"up_limit\"", "]", "=...	25.947368	0.001957
def __get_dtype(typespec): '''Get the dtype associated with a jsonschema type definition Parameters ---------- typespec : dict The schema definition Returns ------- dtype : numpy.dtype The associated dtype ''' if 'type' in typespec: return __TYPE_MAP__.get(...	[ "def", "__get_dtype", "(", "typespec", ")", ":", "if", "'type'", "in", "typespec", ":", "return", "__TYPE_MAP__", ".", "get", "(", "typespec", "[", "'type'", "]", ",", "np", ".", "object_", ")", "elif", "'enum'", "in", "typespec", ":", "# Enums map to obje...	22.2	0.001439
def modify_placeholder(request, page_id): """Modify the content of a page.""" content_type = request.GET.get('content_type') language_id = request.GET.get('language_id') page = get_object_or_404(Page, pk=page_id) perm = request.user.has_perm('pages.change_page') if perm and request.method == 'PO...	[ "def", "modify_placeholder", "(", "request", ",", "page_id", ")", ":", "content_type", "=", "request", ".", "GET", ".", "get", "(", "'content_type'", ")", "language_id", "=", "request", ".", "GET", ".", "get", "(", "'language_id'", ")", "page", "=", "get_o...	39.461538	0.000634
def mask(args): """ %prog mask agpfile bedfile Mask given ranges in components to gaps. When the bedfile contains a single base pair, this position can be a point of split and no base is lost (--splitsingle). """ p = OptionParser(mask.__doc__) p.add_option("--splitobject", default=False...	[ "def", "mask", "(", "args", ")", ":", "p", "=", "OptionParser", "(", "mask", ".", "__doc__", ")", "p", ".", "add_option", "(", "\"--splitobject\"", ",", "default", "=", "False", ",", "action", "=", "\"store_true\"", ",", "help", "=", "\"Create new names fo...	34.888889	0.000664
def to_timedelta(value): """Converts a string to a timedelta.""" if value is None: return None if isinstance(value, (six.integer_types, float)): return timedelta(microseconds=(float(value) / 10)) match = _TIMESPAN_PATTERN.match(value) if match: if match.group(1) == "-": ...	[ "def", "to_timedelta", "(", "value", ")", ":", "if", "value", "is", "None", ":", "return", "None", "if", "isinstance", "(", "value", ",", "(", "six", ".", "integer_types", ",", "float", ")", ")", ":", "return", "timedelta", "(", "microseconds", "=", "(...	33.25	0.001462
def file_copy(name, dest=None, *kwargs): ''' Copies the file from the local device to the junos device. .. code-block:: yaml /home/m2/info.txt: junos: - file_copy - dest: info_copy.txt Parameters: Required src: The s...	[ "def", "file_copy", "(", "name", ",", "dest", "=", "None", ",", "", "", "kwargs", ")", ":", "ret", "=", "{", "'name'", ":", "name", ",", "'changes'", ":", "{", "}", ",", "'result'", ":", "True", ",", "'comment'", ":", "''", "}", "ret", "[", "...	27.428571	0.001678
def add(self, data_source, module, package=None): """ Add data_source to model. Tries to import module, then looks for data source class definition. :param data_source: Name of data source to add. :type data_source: str :param module: Module in which data source resides....	[ "def", "add", "(", "self", ",", "data_source", ",", "module", ",", "package", "=", "None", ")", ":", "super", "(", "Data", ",", "self", ")", ".", "add", "(", "data_source", ",", "module", ",", "package", ")", "# only update layer info if it is missing!", "...	43.217391	0.001969
def get_environment_paths(config, env): """ Get environment paths from given environment variable. """ if env is None: return config.get(Config.DEFAULTS, 'environment') # Config option takes precedence over environment key. if config.has_option(Config.ENVIRONMENTS, env): ...	[ "def", "get_environment_paths", "(", "config", ",", "env", ")", ":", "if", "env", "is", "None", ":", "return", "config", ".", "get", "(", "Config", ".", "DEFAULTS", ",", "'environment'", ")", "# Config option takes precedence over environment key.\r", "if", "confi...	34.066667	0.001905
def update(context, id, etag, name, component_types, label, next_topic_id, active, product_id, data): """update(context, id, etag, name, label, next_topic_id, active, product_id, data) Update a Topic. >>> dcictl topic-update [OPTIONS] :param string id: ID of the Topic [requir...	[ "def", "update", "(", "context", ",", "id", ",", "etag", ",", "name", ",", "component_types", ",", "label", ",", "next_topic_id", ",", "active", ",", "product_id", ",", "data", ")", ":", "if", "component_types", ":", "component_types", "=", "component_types"...	42.62069	0.000791
def records(self): """ Return a new raw REST interface to record resources :rtype: :py:class:`ns1.rest.records.Records` """ import ns1.rest.records return ns1.rest.records.Records(self.config)	[ "def", "records", "(", "self", ")", ":", "import", "ns1", ".", "rest", ".", "records", "return", "ns1", ".", "rest", ".", "records", ".", "Records", "(", "self", ".", "config", ")" ]	29.25	0.008299
def msg_curse(self, args=None, max_width=None): """Return the dict to display in the curse interface.""" # Init the return message ret = [] # Only process if stats exist, not empty (issue #871) and plugin not disabled if not self.stats or (self.stats == []) or self.is_disable():...	[ "def", "msg_curse", "(", "self", ",", "args", "=", "None", ",", "max_width", "=", "None", ")", ":", "# Init the return message", "ret", "=", "[", "]", "# Only process if stats exist, not empty (issue #871) and plugin not disabled", "if", "not", "self", ".", "stats", ...	39.583333	0.001467
def get_expr_id(self, search_group, search, lars_id, instruments, gps_start_time, gps_end_time, comments = None): """ Return the expr_def_id for the row in the table whose values match the givens. If a matching row is not found, returns None. @search_group: string representing the search group (e.g., cbc) ...	[ "def", "get_expr_id", "(", "self", ",", "search_group", ",", "search", ",", "lars_id", ",", "instruments", ",", "gps_start_time", ",", "gps_end_time", ",", "comments", "=", "None", ")", ":", "# create string from instrument set", "instruments", "=", "ifos_from_instr...	43.5	0.025305
def done_waiting(self): """ Show running progress bar (only has an effect if we are in waiting state). """ if self.waiting: self.waiting = False self.progress_bar.show_running()	[ "def", "done_waiting", "(", "self", ")", ":", "if", "self", ".", "waiting", ":", "self", ".", "waiting", "=", "False", "self", ".", "progress_bar", ".", "show_running", "(", ")" ]	32.428571	0.012876
def _get_stddevs(self, imt, mag, n_sites, stddev_types): """ The standard error (assumed equivalent to total standard deviation) is defined as a function of magnitude and period (equation 4, page 1168). For magnitudes lower than 5.0 the standard deviation is equal to that for the...	[ "def", "_get_stddevs", "(", "self", ",", "imt", ",", "mag", ",", "n_sites", ",", "stddev_types", ")", ":", "if", "mag", "<", "5.0", ":", "stddev_mag", "=", "5.0", "else", ":", "stddev_mag", "=", "mag", "if", "imt", ".", "name", "==", "\"PGA\"", "or",...	45.928571	0.001523
def createmeta(accountable, project_key, issue_type=None): """ Create new issue. """ metadata = accountable.create_meta(project_key, issue_type) headers = [ 'project_key', 'issuetype_name', 'field_key', 'field_name', 'required' ] rows = [headers] for project in metadata: ...	[ "def", "createmeta", "(", "accountable", ",", "project_key", ",", "issue_type", "=", "None", ")", ":", "metadata", "=", "accountable", ".", "create_meta", "(", "project_key", ",", "issue_type", ")", "headers", "=", "[", "'project_key'", ",", "'issuetype_name'", ...	35.095238	0.001321
def fromenv() -> 'VaultAuth12Factor': """ :return: Load configuration from the environment and return a configured instance """ i = None # type: VaultAuth12Factor if os.getenv("VAULT_TOKEN", None): i = VaultAuth12Factor.token(os.getenv("VAULT_TOKEN")) elif os...	[ "def", "fromenv", "(", ")", "->", "'VaultAuth12Factor'", ":", "i", "=", "None", "# type: VaultAuth12Factor", "if", "os", ".", "getenv", "(", "\"VAULT_TOKEN\"", ",", "None", ")", ":", "i", "=", "VaultAuth12Factor", ".", "token", "(", "os", ".", "getenv", "(...	53.333333	0.008772
def validate(self, signature, timestamp, nonce): """Validate request signature. :param signature: A string signature parameter sent by weixin. :param timestamp: A int timestamp parameter sent by weixin. :param nonce: A int nonce parameter sent by weixin. """ if not self....	[ "def", "validate", "(", "self", ",", "signature", ",", "timestamp", ",", "nonce", ")", ":", "if", "not", "self", ".", "token", ":", "raise", "RuntimeError", "(", "'WEIXIN_TOKEN is missing'", ")", "if", "self", ".", "expires_in", ":", "try", ":", "timestamp...	32.8	0.001974

def main( gpu:Param("GPU to run on", str)=None ): """Distributed training of Imagenet. Fastest speed is if you run with: python -m fastai.launch""" path = Path('/mnt/fe2_disk/') tot_epochs,size,bs,lr = 60,224,256,3e-1 dirname = 'imagenet' gpu = setup_distrib(gpu) if gpu is None: bs *= torch.cud...

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def optimize(model,cand,obj): """optimize: function for solving the model, updating candidate solutions' list Parameters: - model: Gurobi model object - cand: list of pairs of objective functions (for appending more solutions) - obj: name of a model's variable to setup as objective R...

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def cygpath(x): """ This will return the path of input arg for windows :return: the path in windows """ command = ['cygpath', '-wp', x] p = subprocess.Popen(command, stdout=subprocess.PIPE) output, _ = p.communicate() lines = output.split("\n") return lines[0]

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def _byteify(data): """Convert unicode to bytes""" # Unicode if isinstance(data, six.text_type): return data.encode("utf-8") # Members of lists if isinstance(data, list): return [_byteify(item) for item in data] # Members of dicts if isinstance(data, dict): return ...

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def extract_pos(positions, cash): """ Extract position values from backtest object as returned by get_backtest() on the Quantopian research platform. Parameters ---------- positions : pd.DataFrame timeseries containing one row per symbol (and potentially duplicate datetime indic...

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def load(filename): """Retrieve a pickled object Parameter --------- filename : path Return ------ object Unpickled object """ filename = os.path.normcase(filename) try: with open(filename, 'rb') as f: u = pickle.Unpickler(f) return u.loa...

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def create_actor_polygon(pts, color, **kwargs): """ Creates a VTK actor for rendering polygons. :param pts: points :type pts: vtkFloatArray :param color: actor color :type color: list :return: a VTK actor :rtype: vtkActor """ # Keyword arguments array_name = kwargs.get('name', "...

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def hexdump (bytes, addr=None, preamble=None, printfunc=None, stepsize=16): """hexdump(bytes[, addr[, preamble[, printfunc[, stepsize=16]]]]) Outputs bytes in hexdump format lines similar to the following (here preamble='Bank1', stepsize=8, and len(bytes) == 15):: Bank1: 0xFD020000: 7f45 4c46 0102 0100 ...

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def topickle(table, source=None, protocol=-1, write_header=True): """ Write the table to a pickle file. E.g.:: >>> import petl as etl >>> table1 = [['foo', 'bar'], ... ['a', 1], ... ['b', 2], ... ['c', 2]] >>> etl.topickle(table1, 'e...

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def complete_features(db): """ iterator returning features which are complete (have a 'gene_id' and a 'transcript_id') """ for feature in db.all_features(): gene_id = feature.attributes.get('gene_id', [None])[0] transcript_id = feature.attributes.get('transcript_id', [None])[0] ...

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def handle_http(handler: Resource, args: Tuple, kwargs: Dict, logic: Callable): """Handle a Flask HTTP request :param handler: flask_restful.Resource: An instance of a Flask Restful resource class. :param tuple args: Any positional arguments passed to the wrapper method. :param dict kwargs: Any...

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def Sato_Riedel(T, M, Tb, Tc): r'''Calculate the thermal conductivity of a liquid as a function of temperature using the CSP method of Sato-Riedel [1]_, [2]_, published in Reid [3]_. Requires temperature, molecular weight, and boiling and critical temperatures. .. math:: k = \frac{1.1053}{\...

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def pipe(*args): """ Takes as parameters several dicts, each with the same parameters passed to popen. Runs the various processes in a pipeline, connecting the stdout of every process except the last with the stdin of the next process. Adapted from http://www.enricozini.org/2009/debian/pyt...

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def remove_namespaces(self, rpc_reply): """remove xmlns attributes from rpc reply""" self.__xslt=self.__transform_reply self.__parser = etree.XMLParser(remove_blank_text=True) self.__xslt_doc = etree.parse(io.BytesIO(self.__xslt), self.__parser) self.__transform = etree.XSLT(self...

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def verifyUniqueWcsname(fname,wcsname): """ Report whether or not the specified WCSNAME already exists in the file """ uniq = True numsci,extname = count_sci_extensions(fname) wnames = altwcs.wcsnames(fname,ext=(extname,1)) if wcsname in wnames.values(): uniq = False return uni...

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def build_response(self, request, response, from_cache=False): """ Build a response by making a request or using the cache. This will end up calling send and returning a potentially cached response """ if not from_cache and request.method == 'GET': # apply a...

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def is_bool_matrix(l): r"""Checks if l is a 2D numpy array of bools """ if isinstance(l, np.ndarray): if l.ndim == 2 and (l.dtype == bool): return True return False

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async def main_loop(loop, password, user, ip): # pylint: disable=invalid-name """Main loop.""" async with aiohttp.ClientSession(loop=loop) as session: VAR['sma'] = pysma.SMA(session, ip, password=password, group=user) await VAR['sma'].new_session() if VAR['sma'].sma_sid is None: ...

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def table(self, snrthresh=5.5): """Represent this `QPlane` as an `EventTable` Parameters ---------- snrthresh : `float`, optional lower inclusive threshold on individual tile SNR to keep in the table, default: 5.5 Returns ------- out : `~...

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def delete(self, features, make_backup=True, **kwargs): """ Delete features from database. features : str, iterable, FeatureDB instance If FeatureDB, all features will be used. If string, assume it's the ID of the feature to remove. Otherwise, assume it's an iterable of ...

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def QA_util_time_gap(time, gap, methods, type_): '分钟线回测的时候的gap' min_len = int(240 / int(str(type_).split('min')[0])) day_gap = math.ceil(gap / min_len) if methods in ['>', 'gt']: data = pd.concat( [ pd.DataFrame(QA_util_make_min_index(day, ...

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def get(self): """ Retrieve options set by user.""" return {k:v for k,v in list(self.options.items()) if k in self._allowed_axes}

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def recognise(self, string, line_num): """ Splits the string into chars and distributes these into the buckets of IPA and non-IPA symbols. Expects that there are no precomposed chars in the string. """ symbols = [] unknown = [] for char in string: if char == SPACE: continue try: name = u...

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def remove_attr(self, attr_name): """ Remove cookie attribute. Cookie attribute couldn't be removed if cookie is in read-only mode (RuntimeError exception is raised). :param attr_name: name of attribute to remove :return: None """ if self.__ro_flag: raise RuntimeError('Read-only cookie changing attempt'...

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def setupQuery(self, query, op, editor): """ Sets up the query for this editor. """ if editor is not None: value = editor.currentRecord() if value is None: return False return super(ForeignKeyPlugin, self).setupQuery(query...

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def draw_nodes(self): """ Renders nodes to the figure. """ node_r = self.nodeprops["radius"] lw = self.nodeprops["linewidth"] for i, node in enumerate(self.nodes): x = self.node_coords["x"][i] y = self.node_coords["y"][i] color = self.n...

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def main(): """Create an organization, print out its attributes and delete it.""" server_config = ServerConfig( auth=('admin', 'changeme'), # Use these credentials… url='https://sat1.example.com', # …to talk to this server. ) org = Organization(server_config, name='junk org').creat...

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def write_to_file(self, file_path='', date=str(datetime.date.today()), organization='N/A', members=0, teams=0): """ Writes the current organization information to file (csv). """ self.checkDir(file_path) with open(file_path, 'w+') as output: output.write('date...

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def default_stream_factory( total_content_length, filename, content_type, content_length=None ): """The stream factory that is used per default.""" max_size = 1024 * 500 if SpooledTemporaryFile is not None: return SpooledTemporaryFile(max_size=max_size, mode="wb+") if total_content_length is...

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def walknset_vars(self, task_class=None, *args, **kwargs): """ Set the values of the ABINIT variables in the input files of the nodes Args: task_class: If not None, only the input files of the tasks belonging to class `task_class` are modified. Example: ...

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def get_linearoperator(shape, A, timer=None): """Enhances aslinearoperator if A is None.""" ret = None import scipy.sparse.linalg as scipylinalg if isinstance(A, LinearOperator): ret = A elif A is None: ret = IdentityLinearOperator(shape) elif isinstance(A, numpy.ndarray) or issp...

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def assignGroup(self, action): """ Assigns the group for the given action to the current view. :param action | <QAction> """ grp = unwrapVariant(action.data()) view = self._currentPanel.currentView() view.setViewingGroup(grp)

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def executions(self) -> List[Execution]: """ List of all executions from this session. """ return list(fill.execution for fill in self.wrapper.fills.values())

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def _lonlat_from_geos_angle(x, y, geos_area): """Get lons and lats from x, y in projection coordinates.""" h = (geos_area.proj_dict['h'] + geos_area.proj_dict['a']) / 1000 b__ = (geos_area.proj_dict['a'] / geos_area.proj_dict['b']) ** 2 sd = np.sqrt((h * np.cos(x) * np.cos(y)) ** 2 - (...

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def handle_tags(repo, **kwargs): """:return: repo.tags()""" log.info('tags: %s %s' %(repo, kwargs)) return [str(t) for t in repo.tags(**kwargs)]

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def _draw_text(self, pos, text, font, **kw): """ Remember a single drawable tuple to paint later. """ self.drawables.append((pos, text, font, kw))

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def _connect(self): """Connects to the manager.""" cls = self._get_manager_class(register_callables=False) ins = cls(address=self.addr, authkey=self.authkey) ins.connect() return ins

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def calcDeviationLimits(value, tolerance, mode): """Returns the upper and lower deviation limits for a value and a given tolerance, either as relative or a absolute difference. :param value: can be a single value or a list of values if a list of values is given, the minimal value will be used to ca...

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def _actionsFreqsAngles(self,*args,**kwargs): """ NAME: actionsFreqsAngles (_actionsFreqsAngles) PURPOSE: evaluate the actions, frequencies, and angles (jr,lz,jz,Omegar,Omegaphi,Omegaz,angler,anglephi,anglez) INPUT: Either: a) R,vR,vT,z,vz[,...

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def _preprocess_yml(path): """Dynamically create PY3 version of the file by re-writing 'unicode' to 'str'.""" with open(path) as f: tmp_yaml = f.read() return re.sub(r"unicode", "str", tmp_yaml)

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def element_contains(self, element_id, value): """ Assert provided content is contained within an element found by ``id``. """ elements = ElementSelector( world.browser, str('id("{id}")[contains(., "{value}")]'.format( id=element_id, value=value)), filter_displayed=T...

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def runSearchRequest( self, requestStr, requestClass, responseClass, objectGenerator): """ Runs the specified request. The request is a string containing a JSON representation of an instance of the specified requestClass. We return a string representation of an instance of th...

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def check_missing_references(client): """Find missing references.""" from renku.models.refs import LinkReference missing = [ ref for ref in LinkReference.iter_items(client) if not ref.reference.exists() ] if not missing: return True click.secho( WARNING + 'Ther...

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def setup(self, universe): """ Setup Security with universe. Speeds up future runs. Args: * universe (DataFrame): DataFrame of prices with security's name as one of the columns. """ # if we already have all the prices, we will store them to speed up ...

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def unlock(): ''' Unlocks the candidate configuration. CLI Example: .. code-block:: bash salt 'device_name' junos.unlock ''' conn = __proxy__['junos.conn']() ret = {} ret['out'] = True try: conn.cu.unlock() ret['message'] = "Successfully unlocked the config...

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def plot(self, label=None, colour='g', style='-'): # pragma: no cover '''Plot the time series.''' pylab = LazyImport.pylab() pylab.plot(self.dates, self.values, '%s%s' % (colour, style), label=label) if label is not None: pylab.legend() pylab.show()

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def compute_implicit_line(nodes): """Compute the implicit form of the line connecting curve endpoints. .. note:: This assumes, but does not check, that the first and last nodes in ``nodes`` are different. Computes :math:`a, b` and :math:`c` in the normalized implicit equation for the li...

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def validate_config_json(pjson): """Takes the parsed JSON (output from json.load) from a configuration file and checks it for common errors.""" # Make sure that the root json is a dict if type(pjson) is not dict: raise ParseError("Configuration file should contain a single J...

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def anneal(self): """Minimizes the energy of a system by simulated annealing. Parameters state : an initial arrangement of the system Returns (state, energy): the best state and energy found. """ step = 0 self.start = time.time() # Precompute fa...

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def write_networks(folder, network_table, networks): """ Writing networkTable, nodes and edges to Perseus readable format. :param folder: Path to output directory. :param network_table: Network table. :param networks: Dictionary with node and edge tables, indexed by network guid. """ ma...

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def result_cached(task_id, wait=0, broker=None): """ Return the result from the cache backend """ if not broker: broker = get_broker() start = time() while True: r = broker.cache.get('{}:{}'.format(broker.list_key, task_id)) if r: return SignedPackage.loads(r...

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def url_decode(s, charset='utf-8', decode_keys=False, include_empty=True, errors='replace', separator='&', cls=None): """ Parse a querystring and return it as :class:`MultiDict`. There is a difference in key decoding on different Python versions. On Python 3 keys will always be fully de...

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def parse_skewer_log(self, f): """ Go through log file looking for skewer output """ fh = f['f'] regexes = { 'fq1': "Input file:\s+(.+)", 'fq2': "Paired file:\s+(.+)", 'r_processed': "(\d+) read|reads pairs? processed", 'r_short_filtered': "(\d+) \...

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def save(self, key, data): """ Save data associated with key. """ self._db[key] = json.dumps(data) self._db.sync()

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def get_value(self, source): """Apply self.convert to the source. The parameter passed to convert depends on self.source_name. If source_name is given, self.convert(getattr(source, source_name)) is called, otherwise self.convert(source) is called. """ if self.source_name is None: present, valu...

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def get(filepath): """ Return (width, height) for a given img file content no requirements """ height = -1 width = -1 with open(filepath, 'rb') as fhandle: head = fhandle.read(24) size = len(head) # handle GIFs if size >= 10 and head[:6] in (b'GIF87a', b'GIF8...

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def add_gate_option_group(parser): """Adds the options needed to apply gates to data. Parameters ---------- parser : object ArgumentParser instance. """ gate_group = parser.add_argument_group("Options for gating data.") gate_group.add_argument("--gate", nargs="+", type=str, ...

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def rotation(self): """Rotation of device Returns: int (0-3) """ rs = dict(PORTRAIT=0, LANDSCAPE=1, UIA_DEVICE_ORIENTATION_LANDSCAPERIGHT=3) return rs.get(self.session.orientation, 0)

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def _syllabifyPhones(phoneList, syllableList): ''' Given a phone list and a syllable list, syllabify the phones Typically used by findBestSyllabification which first aligns the phoneList with a dictionary phoneList and then uses the dictionary syllabification to syllabify the input phoneList. ...

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def sync_allocations(self): """ Synchronize vxlan_allocations table with configured tunnel ranges. """ # determine current configured allocatable vnis vxlan_vnis = set() for tun_min, tun_max in self.tunnel_ranges: vxlan_vnis |= set(six.moves.range(tun_min, tu...

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def _create_minion_object(self, opts, timeout, safe, io_loop=None, loaded_base_name=None, jid_queue=None): ''' Helper function to return the correct type of object ''' return Minion(opts, timeout, ...

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def optimize_seq_and_branch_len(self,reuse_branch_len=True, prune_short=True, marginal_sequences=False, branch_length_mode='joint', max_iter=5, infer_gtr=False, **kwargs): """ Iteratively set branch lengths and reconstruct ancestral...

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def loaded_frame(self, tag): """Deprecated; use the add method.""" # turn 2.2 into 2.3/2.4 tags if len(type(tag).__name__) == 3: tag = type(tag).__base__(tag) self[tag.HashKey] = tag

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def response(self, payload): """ Send a response to the previously received challenge, with the given `payload`. The payload is encoded using base64 and transmitted to the server. Return the next state of the state machine as tuple (see :class:`SASLStateMachine` for deta...

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def _join(*args): """Join S3 bucket args together. Remove empty entries and strip left-leading ``/`` """ return delimiter.join(filter(lambda s: s != '', map(lambda s: s.lstrip(delimiter), args)))

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def jpegtran(ext_args): """Create argument list for jpegtran.""" args = copy.copy(_JPEGTRAN_ARGS) if Settings.destroy_metadata: args += ["-copy", "none"] else: args += ["-copy", "all"] if Settings.jpegtran_prog: args += ["-progressive"] args += ['-outfile'] args += [e...

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def _filter_meta_data(self, source, soup, data, url=None): """This method filters the web page content for meta tags that match patterns given in the ``FILTER_MAPS`` :param source: The key of the meta dictionary in ``FILTER_MAPS['meta']`` :type source: string :param soup: BeautifulSoup ...

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def update_beliefs(self, corpus_id): """Return updated belief scores for a given corpus. Parameters ---------- corpus_id : str The ID of the corpus for which beliefs are to be updated. Returns ------- dict A dictionary of belief scores wi...

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def query(self, collection, query, request_handler='select', **kwargs): """ :param str collection: The name of the collection for the request :param str request_handler: Request handler, default is 'select' :param dict query: Python dictonary of Solr query parameters. Sends a qu...

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def get_description(self, lang=None): """ Get the DC description of the object :param lang: Lang to retrieve :return: Description string representation :rtype: Literal """ return self.metadata.get_single(key=RDF_NAMESPACES.CTS.description, lang=lang)

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def commands(self): """ Returns a list of commands that are supported by the motor controller. Possible values are `run-forever`, `run-to-abs-pos`, `run-to-rel-pos`, `run-timed`, `run-direct`, `stop` and `reset`. Not all commands may be supported. - `run-forever` will cause the ...

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def addAction(self, action): """ Register Custom Action """ self.ACTIONS.append(action) return "ACTION#{}".format(len(self.ACTIONS) - 1)

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def parse_substitution_from_list(list_rep): """ Parse a substitution from the list representation in the config file. """ # We are expecting [pattern, replacement [, is_multiline]] if type(list_rep) is not list: raise SyntaxError('Substitution must be a list') if len(list_rep) < 2: ...

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def read_dataset(ctx, dataset, output): """Read the attributes of a dataset. Prints a JSON object containing the attributes of a dataset. The attributes: owner (a Mapbox account), id (dataset id), created (Unix timestamp), modified (timestamp), name (string), and description (string). $ ma...

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def diff(var, key): '''calculate differences between values''' global last_diff ret = 0 if not key in last_diff: last_diff[key] = var return 0 ret = var - last_diff[key] last_diff[key] = var return ret

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def lookupRecords(self, record): """ Lookups records based on the inputed record. This will use the tableLookupIndex property to determine the Orb Index method to use to look up records. That index method should take the inputed record as an argument, and return a list of...

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def _from_python(self, value): """ Converts python values to a form suitable for insertion into the xml we send to solr. """ if hasattr(value, 'strftime'): if hasattr(value, 'hour'): offset = value.utcoffset() if offset: ...

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def unlike(self): """ Unlike a clip. """ r = requests.delete( "https://kippt.com/api/clips/%s/likes" % (self.id), headers=self.kippt.header) return (r.json())

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def spitOutLines(lines, file, expand=False): r"""Write all the `lines` to `file` (which can be a string/unicode or a file handler).""" file = _normalizeToFile(file, mode="w", expand=expand) try: file.writelines(lines) finally: file.close()

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def add_namespace(self, ns_prefix, ns_uri): ''' preferred method is to instantiate with repository under 'context', but prefixes / namespaces can be added for a Resource instance adds to self.rdf.prefixes which will endure through create/update/refresh, and get added back to parsed graph namespaces Args:...

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def __prepare(self): """Update database with existing devices""" self.log.debug("prepare") if self.__phase > 0: raise RuntimeError("Internal error: Can only prepare in phase 0") server_instance = self.server_instance db = Database() # get list of server dev...

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def set_managing_editor(self): """Parses managing editor and set value""" try: self.managing_editor = self.soup.find('managingeditor').string except AttributeError: self.managing_editor = None

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def allow_create(function): """ Decorate the `form_valid` method in a Create/Update class to create new values if necessary. .. warning:: Make sure that this decorator **only** decorates the ``form_valid()`` method and **only** this one. """ @wraps(function) def _wrapped_f...

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def _flux_engine_data(engine): """ Return rTorrent data set for pushing to InfluxDB. """ data = stats.engine_data(engine) # Make it flat data["up_rate"] = data["upload"][0] data["up_limit"] = data["upload"][1] data["down_rate"] = data["download"][0] data["down_limit"] = data["download"]...

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def __get_dtype(typespec): '''Get the dtype associated with a jsonschema type definition Parameters ---------- typespec : dict The schema definition Returns ------- dtype : numpy.dtype The associated dtype ''' if 'type' in typespec: return __TYPE_MAP__.get(...

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def modify_placeholder(request, page_id): """Modify the content of a page.""" content_type = request.GET.get('content_type') language_id = request.GET.get('language_id') page = get_object_or_404(Page, pk=page_id) perm = request.user.has_perm('pages.change_page') if perm and request.method == 'PO...

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def mask(args): """ %prog mask agpfile bedfile Mask given ranges in components to gaps. When the bedfile contains a single base pair, this position can be a point of split and no base is lost (--splitsingle). """ p = OptionParser(mask.__doc__) p.add_option("--splitobject", default=False...

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def to_timedelta(value): """Converts a string to a timedelta.""" if value is None: return None if isinstance(value, (six.integer_types, float)): return timedelta(microseconds=(float(value) / 10)) match = _TIMESPAN_PATTERN.match(value) if match: if match.group(1) == "-": ...

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33.25

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def file_copy(name, dest=None, **kwargs): ''' Copies the file from the local device to the junos device. .. code-block:: yaml /home/m2/info.txt: junos: - file_copy - dest: info_copy.txt Parameters: Required * src: The s...

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def add(self, data_source, module, package=None): """ Add data_source to model. Tries to import module, then looks for data source class definition. :param data_source: Name of data source to add. :type data_source: str :param module: Module in which data source resides....

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43.217391

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def get_environment_paths(config, env): """ Get environment paths from given environment variable. """ if env is None: return config.get(Config.DEFAULTS, 'environment') # Config option takes precedence over environment key. if config.has_option(Config.ENVIRONMENTS, env): ...

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34.066667

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def update(context, id, etag, name, component_types, label, next_topic_id, active, product_id, data): """update(context, id, etag, name, label, next_topic_id, active, product_id, data) Update a Topic. >>> dcictl topic-update [OPTIONS] :param string id: ID of the Topic [requir...

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42.62069

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def records(self): """ Return a new raw REST interface to record resources :rtype: :py:class:`ns1.rest.records.Records` """ import ns1.rest.records return ns1.rest.records.Records(self.config)

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29.25

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def msg_curse(self, args=None, max_width=None): """Return the dict to display in the curse interface.""" # Init the return message ret = [] # Only process if stats exist, not empty (issue #871) and plugin not disabled if not self.stats or (self.stats == []) or self.is_disable():...

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39.583333

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def get_expr_id(self, search_group, search, lars_id, instruments, gps_start_time, gps_end_time, comments = None): """ Return the expr_def_id for the row in the table whose values match the givens. If a matching row is not found, returns None. @search_group: string representing the search group (e.g., cbc) ...

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43.5

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def done_waiting(self): """ Show running progress bar (only has an effect if we are in waiting state). """ if self.waiting: self.waiting = False self.progress_bar.show_running()

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32.428571

0.012876

def _get_stddevs(self, imt, mag, n_sites, stddev_types): """ The standard error (assumed equivalent to total standard deviation) is defined as a function of magnitude and period (equation 4, page 1168). For magnitudes lower than 5.0 the standard deviation is equal to that for the...

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45.928571

0.001523

def createmeta(accountable, project_key, issue_type=None): """ Create new issue. """ metadata = accountable.create_meta(project_key, issue_type) headers = [ 'project_key', 'issuetype_name', 'field_key', 'field_name', 'required' ] rows = [headers] for project in metadata: ...

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35.095238

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def fromenv() -> 'VaultAuth12Factor': """ :return: Load configuration from the environment and return a configured instance """ i = None # type: VaultAuth12Factor if os.getenv("VAULT_TOKEN", None): i = VaultAuth12Factor.token(os.getenv("VAULT_TOKEN")) elif os...

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def validate(self, signature, timestamp, nonce): """Validate request signature. :param signature: A string signature parameter sent by weixin. :param timestamp: A int timestamp parameter sent by weixin. :param nonce: A int nonce parameter sent by weixin. """ if not self....

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32.8

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