kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def map_concepts_to_indicators( self, n: int = 1, min_temporal_res: Optional[str] = None ): """ Map each concept node in the AnalysisGraph instance to one or more tangible quantities, known as 'indicators'. Args: n: Number of matches to keep min_temporal_res:...	[ "def", "map_concepts_to_indicators", "(", "self", ",", "n", ":", "int", "=", "1", ",", "min_temporal_res", ":", "Optional", "[", "str", "]", "=", "None", ")", ":", "for", "node", "in", "self", ".", "nodes", "(", "data", "=", "True", ")", ":", "query_...	35.8	0.001813
def vcf_writer(parser, keep, extract, args): """Writes the data in VCF format.""" # The output output = sys.stdout if args.output == "-" else open(args.output, "w") try: # Getting the samples samples = np.array(parser.get_samples(), dtype=str) k = _get_sample_select(samples=samp...	[ "def", "vcf_writer", "(", "parser", ",", "keep", ",", "extract", ",", "args", ")", ":", "# The output", "output", "=", "sys", ".", "stdout", "if", "args", ".", "output", "==", "\"-\"", "else", "open", "(", "args", ".", "output", ",", "\"w\"", ")", "t...	32.346154	0.000577
def _wrapper_find_one(self, filter_=None, args, kwargs): """Convert record to a dict that has no key error """ return self.__collect.find_one(filter_, args, **kwargs)	[ "def", "_wrapper_find_one", "(", "self", ",", "filter_", "=", "None", ",", "", "args", ",", "", "", "kwargs", ")", ":", "return", "self", ".", "__collect", ".", "find_one", "(", "filter_", ",", "", "args", ",", "", "", "kwargs", ")" ]	47.75	0.010309
def reverse( self, query, exactly_one=DEFAULT_SENTINEL, timeout=DEFAULT_SENTINEL, feature_code=None, lang=None, find_nearby_type='findNearbyPlaceName', ): """ Return an address by location point. .. vers...	[ "def", "reverse", "(", "self", ",", "query", ",", "exactly_one", "=", "DEFAULT_SENTINEL", ",", "timeout", "=", "DEFAULT_SENTINEL", ",", "feature_code", "=", "None", ",", "lang", "=", "None", ",", "find_nearby_type", "=", "'findNearbyPlaceName'", ",", ")", ":",...	39.686275	0.001928
async def run_handler(self, request: RPCRequest) -> Union[RPCReply, RPCError]: """ Process a JSON RPC request :param RPCRequest request: JSON RPC request :return: JSON RPC reply """ with catch_warnings(record=True) as warnings: try: rpc_handle...	[ "async", "def", "run_handler", "(", "self", ",", "request", ":", "RPCRequest", ")", "->", "Union", "[", "RPCReply", ",", "RPCError", "]", ":", "with", "catch_warnings", "(", "record", "=", "True", ")", "as", "warnings", ":", "try", ":", "rpc_handler", "=...	38.029412	0.002262
def current(self): """Returns the current (token, position) or (EndOfFile, EndOfFile)""" if self.index >= self.len: self._fill((self.index - self.len) + 1) return self.index < self.len and self.buffer[self.index] or (EndOfFile, EndOfFile)	[ "def", "current", "(", "self", ")", ":", "if", "self", ".", "index", ">=", "self", ".", "len", ":", "self", ".", "_fill", "(", "(", "self", ".", "index", "-", "self", ".", "len", ")", "+", "1", ")", "return", "self", ".", "index", "<", "self", ...	54	0.010949
def split_docstring(value): """ Splits the docstring of the given value into it's summary and body. :returns: a 2-tuple of the format ``(summary, body)`` """ docstring = textwrap.dedent(getattr(value, '__doc__', '')) if not docstring: return None pieces = docstring.strip().split('\...	[ "def", "split_docstring", "(", "value", ")", ":", "docstring", "=", "textwrap", ".", "dedent", "(", "getattr", "(", "value", ",", "'__doc__'", ",", "''", ")", ")", "if", "not", "docstring", ":", "return", "None", "pieces", "=", "docstring", ".", "strip",...	25.176471	0.002252
def cmbuild_from_alignment(aln, structure_string, refine=False, \ return_alignment=False,params=None): """Uses cmbuild to build a CM file given an alignment and structure string. - aln: an Alignment object or something that can be used to construct one. All sequences must be the same lengt...	[ "def", "cmbuild_from_alignment", "(", "aln", ",", "structure_string", ",", "refine", "=", "False", ",", "return_alignment", "=", "False", ",", "params", "=", "None", ")", ":", "aln", "=", "Alignment", "(", "aln", ")", "if", "len", "(", "structure_string", ...	39.672414	0.009754
def get_abbreviation_of(self, name): """Get abbreviation of a language.""" for language in self.user_data.languages: if language['language_string'] == name: return language['language'] return None	[ "def", "get_abbreviation_of", "(", "self", ",", "name", ")", ":", "for", "language", "in", "self", ".", "user_data", ".", "languages", ":", "if", "language", "[", "'language_string'", "]", "==", "name", ":", "return", "language", "[", "'language'", "]", "r...	40.5	0.008065
def pull(image, insecure_registry=False, api_response=False, client_timeout=salt.utils.docker.CLIENT_TIMEOUT): ''' .. versionchanged:: 2018.3.0 If no tag is specified in the ``image`` argument, all tags for the image will be pulled. For this reason is it recommended to...	[ "def", "pull", "(", "image", ",", "insecure_registry", "=", "False", ",", "api_response", "=", "False", ",", "client_timeout", "=", "salt", ".", "utils", ".", "docker", ".", "CLIENT_TIMEOUT", ")", ":", "_prep_pull", "(", ")", "kwargs", "=", "{", "'stream'"...	30.680412	0.000326
def __parse_entry(entry_line): """Parse the SOFT file entry name line that starts with '^', '!' or '#'. Args: entry_line (:obj:`str`): Line from SOFT to be parsed. Returns: :obj:`2-tuple`: Type of entry, value of entry. """ if entry_line.startswith("!"): entry_line = sub(...	[ "def", "__parse_entry", "(", "entry_line", ")", ":", "if", "entry_line", ".", "startswith", "(", "\"!\"", ")", ":", "entry_line", "=", "sub", "(", "r\"!\\w*?_\"", ",", "''", ",", "entry_line", ")", "else", ":", "entry_line", "=", "entry_line", ".", "strip"...	31	0.001565
def __calculate_changes(self, updated_centers): """! @brief Calculate changes between centers. @return (float) Maximum change between centers. """ changes = numpy.sum(numpy.square(self.__centers - updated_centers), axis=1).T return numpy.max(changes)	[ "def", "__calculate_changes", "(", "self", ",", "updated_centers", ")", ":", "changes", "=", "numpy", ".", "sum", "(", "numpy", ".", "square", "(", "self", ".", "__centers", "-", "updated_centers", ")", ",", "axis", "=", "1", ")", ".", "T", "return", "...	33.333333	0.00974
def purge_existing_ovb(nova_api, neutron): """Purge any trace of an existing OVB deployment. """ LOG.info('Cleaning up OVB environment from the tenant.') for server in nova_api.servers.list(): if server.name in ('bmc', 'undercloud'): server.delete() if server.name.startswith(...	[ "def", "purge_existing_ovb", "(", "nova_api", ",", "neutron", ")", ":", "LOG", ".", "info", "(", "'Cleaning up OVB environment from the tenant.'", ")", "for", "server", "in", "nova_api", ".", "servers", ".", "list", "(", ")", ":", "if", "server", ".", "name", ...	45.339286	0.001928
def optplot(modes=('absorption',), filenames=None, prefix=None, directory=None, gaussian=None, band_gaps=None, labels=None, average=True, height=6, width=6, xmin=0, xmax=None, ymin=0, ymax=1e5, colours=None, style=None, no_base_style=None, image_format='pdf', dpi=400, plt...	[ "def", "optplot", "(", "modes", "=", "(", "'absorption'", ",", ")", ",", "filenames", "=", "None", ",", "prefix", "=", "None", ",", "directory", "=", "None", ",", "gaussian", "=", "None", ",", "band_gaps", "=", "None", ",", "labels", "=", "None", ","...	47.480315	0.000325
def in6_get_common_plen(a, b): """ Return common prefix length of IPv6 addresses a and b. """ def matching_bits(byte1, byte2): for i in range(8): cur_mask = 0x80 >> i if (byte1 & cur_mask) != (byte2 & cur_mask): return i return 8 tmpA = inet_p...	[ "def", "in6_get_common_plen", "(", "a", ",", "b", ")", ":", "def", "matching_bits", "(", "byte1", ",", "byte2", ")", ":", "for", "i", "in", "range", "(", "8", ")", ":", "cur_mask", "=", "0x80", ">>", "i", "if", "(", "byte1", "&", "cur_mask", ")", ...	28.888889	0.001862
def if_features(self, stmt: Statement, mid: ModuleId) -> bool: """Evaluate ``if-feature`` substatements on a statement, if any. Args: stmt: Yang statement that is tested on if-features. mid: Identifier of the module in which `stmt` is present. Raises: Module...	[ "def", "if_features", "(", "self", ",", "stmt", ":", "Statement", ",", "mid", ":", "ModuleId", ")", "->", "bool", ":", "iffs", "=", "stmt", ".", "find_all", "(", "\"if-feature\"", ")", "if", "not", "iffs", ":", "return", "True", "for", "i", "in", "if...	38.666667	0.002404
def make_common_parser(): """ Creates an argument parser (argparse module) with the options that should be common to all shells. The result can be used as a parent parser (``parents`` argument in ``argparse.ArgumentParser``) :return: An ArgumentParser object """ parser = argparse.Argum...	[ "def", "make_common_parser", "(", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "add_help", "=", "False", ")", "# Version number", "parser", ".", "add_argument", "(", "\"--version\"", ",", "action", "=", "\"version\"", ",", "version", "=", "...	26.423077	0.000468
def _remote_connection(server, opts, argparser_): """Initiate a remote connection, via PyWBEM. Arguments for the request are part of the command line arguments and include user name, password, namespace, etc. """ global CONN # pylint: disable=global-statement if opts.timeout is not N...	[ "def", "_remote_connection", "(", "server", ",", "opts", ",", "argparser_", ")", ":", "global", "CONN", "# pylint: disable=global-statement", "if", "opts", ".", "timeout", "is", "not", "None", ":", "if", "opts", ".", "timeout", "<", "0", "or", "opts", ".", ...	33.608696	0.000419
def block(self, userId, minute): """ 封禁用户方法（每秒钟限 100 次）方法 @param userId:用户 Id。（必传） @param minute:封禁时长,单位为分钟，最大值为43200分钟。（必传） @return code:返回码，200 为正常。 @return errorMessage:错误信息。 """ desc = { "name": "CodeSuccessReslut", "desc": ...	[ "def", "block", "(", "self", ",", "userId", ",", "minute", ")", ":", "desc", "=", "{", "\"name\"", ":", "\"CodeSuccessReslut\"", ",", "\"desc\"", ":", "\" http 成功返回结果\",", "", "\"fields\"", ":", "[", "{", "\"name\"", ":", "\"code\"", ",", "\"type\"", ":", ...	28.793103	0.00927
def genrows(cursor: Cursor, arraysize: int = 1000) \ -> Generator[List[Any], None, None]: """ Generate all rows from a cursor. Args: cursor: the cursor arraysize: split fetches into chunks of this many records Yields: each row """ # http://code.activestate.com/r...	[ "def", "genrows", "(", "cursor", ":", "Cursor", ",", "arraysize", ":", "int", "=", "1000", ")", "->", "Generator", "[", "List", "[", "Any", "]", ",", "None", ",", "None", "]", ":", "# http://code.activestate.com/recipes/137270-use-generators-for-fetching-large-db-...	28.052632	0.001815
def rotate(compound, theta, around): """Rotate a compound around an arbitrary vector. Parameters ---------- compound : mb.Compound The compound being rotated. theta : float The angle by which to rotate the compound, in radians. around : np.ndarray, shape=(3,), dtype=float ...	[ "def", "rotate", "(", "compound", ",", "theta", ",", "around", ")", ":", "around", "=", "np", ".", "asarray", "(", "around", ")", ".", "reshape", "(", "3", ")", "if", "np", ".", "array_equal", "(", "around", ",", "np", ".", "zeros", "(", "3", ")"...	35.210526	0.001456
def path_param(name, ns): """ Build a path parameter definition. """ if ns.identifier_type == "uuid": param_type = "string" param_format = "uuid" else: param_type = "string" param_format = None kwargs = { "name": name, "in": "path", "requ...	[ "def", "path_param", "(", "name", ",", "ns", ")", ":", "if", "ns", ".", "identifier_type", "==", "\"uuid\"", ":", "param_type", "=", "\"string\"", "param_format", "=", "\"uuid\"", "else", ":", "param_type", "=", "\"string\"", "param_format", "=", "None", "kw...	21.857143	0.002088
def zambretti_code(params, hourly_data): """Simple implementation of Zambretti forecaster algorithm. Inspired by beteljuice.com Java algorithm, as converted to Python by honeysucklecottage.me.uk, and further information from http://www.meteormetrics.com/zambretti.htm""" north = literal_eval(params.g...	[ "def", "zambretti_code", "(", "params", ",", "hourly_data", ")", ":", "north", "=", "literal_eval", "(", "params", ".", "get", "(", "'Zambretti'", ",", "'north'", ",", "'True'", ")", ")", "baro_upper", "=", "float", "(", "params", ".", "get", "(", "'Zamb...	40.446429	0.001293
def replySocket(self, port, host='*'): ''' Create a REP-style socket for servers ''' try: socket = self._context.socket(zmq.REP) socket.bind(self.tcpAddress(host, port)) except Exception as e: newMsg= str("%s %s:%d" % (str(e), host, port)) ...	[ "def", "replySocket", "(", "self", ",", "port", ",", "host", "=", "'*'", ")", ":", "try", ":", "socket", "=", "self", ".", "_context", ".", "socket", "(", "zmq", ".", "REP", ")", "socket", ".", "bind", "(", "self", ".", "tcpAddress", "(", "host", ...	33	0.008043
def _module_iterator(root, recursive=True): """Iterate over modules.""" yield root stack = collections.deque((root,)) while stack: package = stack.popleft() # The '__path__' attribute of a package might return a list of paths if # the package is referenced as a namespace. ...	[ "def", "_module_iterator", "(", "root", ",", "recursive", "=", "True", ")", ":", "yield", "root", "stack", "=", "collections", ".", "deque", "(", "(", "root", ",", ")", ")", "while", "stack", ":", "package", "=", "stack", ".", "popleft", "(", ")", "#...	38.692308	0.00097
def replace_pattern(pattern, repl, count=0, flags=8, bufsize=1, append_if_not_found=False, prepend_if_not_found=False, not_found_content=None, search_only=False...	[ "def", "replace_pattern", "(", "pattern", ",", "repl", ",", "count", "=", "0", ",", "flags", "=", "8", ",", "bufsize", "=", "1", ",", "append_if_not_found", "=", "False", ",", "prepend_if_not_found", "=", "False", ",", "not_found_content", "=", "None", ","...	41.156028	0.001178
def read_k2sff_lightcurve(lcfits): '''This reads a K2 SFF (Vandenberg+ 2014) light curve into an `lcdict`. Use this with the light curves from the K2 SFF project at MAST. Parameters ---------- lcfits : str The filename of the FITS light curve file downloaded from MAST. Returns --...	[ "def", "read_k2sff_lightcurve", "(", "lcfits", ")", ":", "# read the fits file", "hdulist", "=", "pyfits", ".", "open", "(", "lcfits", ")", "lchdr", ",", "lcdata", "=", "hdulist", "[", "1", "]", ".", "header", ",", "hdulist", "[", "1", "]", ".", "data", ...	33.315385	0.012108
def _query(self, request, filter=None): """ Build a query based on the filter and the request params, and send the query to the database. """ limit = None offset = None if 'maxfeatures' in request.params: limit = int(request.params['maxfeatures']) if 'limi...	[ "def", "_query", "(", "self", ",", "request", ",", "filter", "=", "None", ")", ":", "limit", "=", "None", "offset", "=", "None", "if", "'maxfeatures'", "in", "request", ".", "params", ":", "limit", "=", "int", "(", "request", ".", "params", "[", "'ma...	42.666667	0.002183
def invalid_characters(self, text): """Give simple list of invalid characters present in text.""" return ''.join(sorted(set([c for c in text if c not in self.alphabet])))	[ "def", "invalid_characters", "(", "self", ",", "text", ")", ":", "return", "''", ".", "join", "(", "sorted", "(", "set", "(", "[", "c", "for", "c", "in", "text", "if", "c", "not", "in", "self", ".", "alphabet", "]", ")", ")", ")" ]	61.333333	0.016129
def usb(self, state): """Sets the monsoon's USB passthrough mode. This is specific to the USB port in front of the monsoon box which connects to the powered device, NOT the USB that is used to talk to the monsoon itself. "Off" means USB always off. "On" means USB always on. ...	[ "def", "usb", "(", "self", ",", "state", ")", ":", "state_lookup", "=", "{", "\"off\"", ":", "0", ",", "\"on\"", ":", "1", ",", "\"auto\"", ":", "2", "}", "state", "=", "state", ".", "lower", "(", ")", "if", "state", "in", "state_lookup", ":", "c...	39.384615	0.001907
def __bind(self): ''' Binds the reply server ''' if self.log_queue is not None: salt.log.setup.set_multiprocessing_logging_queue(self.log_queue) if self.log_queue_level is not None: salt.log.setup.set_multiprocessing_logging_level(self.log_queue_level) ...	[ "def", "__bind", "(", "self", ")", ":", "if", "self", ".", "log_queue", "is", "not", "None", ":", "salt", ".", "log", ".", "setup", ".", "set_multiprocessing_logging_queue", "(", "self", ".", "log_queue", ")", "if", "self", ".", "log_queue_level", "is", ...	48.064516	0.001973
def to_native_units(self, motor): """ Return the native speed measurement required to achieve desired rotations-per-minute """ assert abs(self.rotations_per_minute) <= motor.max_rpm,\ "invalid rotations-per-minute: {} max RPM is {}, {} was requested".format( motor...	[ "def", "to_native_units", "(", "self", ",", "motor", ")", ":", "assert", "abs", "(", "self", ".", "rotations_per_minute", ")", "<=", "motor", ".", "max_rpm", ",", "\"invalid rotations-per-minute: {} max RPM is {}, {} was requested\"", ".", "format", "(", "motor", ",...	53.625	0.009174
def get_char_weights(doc_weighted_spans, preserve_density=None): # type: (DocWeightedSpans, Optional[bool]) -> np.ndarray """ Return character weights for a text document with highlighted features. If preserve_density is True, then color for longer fragments will be less intensive than for shorter fragm...	[ "def", "get_char_weights", "(", "doc_weighted_spans", ",", "preserve_density", "=", "None", ")", ":", "# type: (DocWeightedSpans, Optional[bool]) -> np.ndarray", "if", "preserve_density", "is", "None", ":", "preserve_density", "=", "doc_weighted_spans", ".", "preserve_density...	50.772727	0.000879
def send_buffered_messages(self): """Send messages in out_stream to the Stream Manager""" while not self.out_stream.is_empty() and self._stmgr_client.is_registered: tuple_set = self.out_stream.poll() if isinstance(tuple_set, tuple_pb2.HeronTupleSet): tuple_set.src_task_id = self.my_pplan_hel...	[ "def", "send_buffered_messages", "(", "self", ")", ":", "while", "not", "self", ".", "out_stream", ".", "is_empty", "(", ")", "and", "self", ".", "_stmgr_client", ".", "is_registered", ":", "tuple_set", "=", "self", ".", "out_stream", ".", "poll", "(", ")"...	55.75	0.00883
def add_dependency(self, p_from_todo, p_to_todo): """ Adds a dependency from task 1 to task 2. """ def find_next_id(): """ Find a new unused ID. Unused means that no task has it as an 'id' value or as a 'p' value. """ def id_exists(...	[ "def", "add_dependency", "(", "self", ",", "p_from_todo", ",", "p_to_todo", ")", ":", "def", "find_next_id", "(", ")", ":", "\"\"\"\n Find a new unused ID.\n Unused means that no task has it as an 'id' value or as a 'p'\n value.\n \"\"\"", ...	35.448276	0.000947
def fit(self, X, y, **kwargs): """ Fits the learning curve with the wrapped model to the specified data. Draws training and test score curves and saves the scores to the estimator. Parameters ---------- X : array-like, shape (n_samples, n_features) Tr...	[ "def", "fit", "(", "self", ",", "X", ",", "y", ",", "", "", "kwargs", ")", ":", "self", ".", "cv_scores_", "=", "cross_val_score", "(", "self", ".", "estimator", ",", "X", ",", "y", ",", "cv", "=", "self", ".", "cv", ",", "scoring", "=", "sel...	30.275862	0.002208
def iter_configurations(kafka_topology_base_path=None): """Cluster topology iterator. Iterate over all the topologies available in config. """ if not kafka_topology_base_path: config_dirs = get_conf_dirs() else: config_dirs = [kafka_topology_base_path] types = set() for conf...	[ "def", "iter_configurations", "(", "kafka_topology_base_path", "=", "None", ")", ":", "if", "not", "kafka_topology_base_path", ":", "config_dirs", "=", "get_conf_dirs", "(", ")", "else", ":", "config_dirs", "=", "[", "kafka_topology_base_path", "]", "types", "=", ...	32.2	0.001206
def _get_default_value_to_cache(self, xblock): """ Perform special logic to provide a field's default value for caching. """ try: # pylint: disable=protected-access return self.from_json(xblock._field_data.default(xblock, self.name)) except KeyError: ...	[ "def", "_get_default_value_to_cache", "(", "self", ",", "xblock", ")", ":", "try", ":", "# pylint: disable=protected-access", "return", "self", ".", "from_json", "(", "xblock", ".", "_field_data", ".", "default", "(", "xblock", ",", "self", ".", "name", ")", "...	40.5	0.008048
def determine_scale(scale, img, mark): """ Scales an image using a specified ratio, 'F' or 'R'. If `scale` is 'F', the image is scaled to be as big as possible to fit in `img` without falling off the edges. If `scale` is 'R', the watermark resizes to a percentage of minimum size of source image. R...	[ "def", "determine_scale", "(", "scale", ",", "img", ",", "mark", ")", ":", "if", "scale", ":", "try", ":", "scale", "=", "float", "(", "scale", ")", "except", "(", "ValueError", ",", "TypeError", ")", ":", "pass", "if", "isinstance", "(", "scale", ",...	40.95122	0.002327
def list_outbox_faxes(self, **kwargs): # noqa: E501 """Get outbox records # noqa: E501 Get outbox fax records information # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.list_o...	[ "def", "list_outbox_faxes", "(", "self", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async'", ")", ":", "return", "self", ".", "list_outbox_faxes_with_http_i...	40.85	0.002392
def __calculate_nearest_distance(self, index_cluster1, index_cluster2): """! @brief Finds two nearest objects in two specified clusters and returns distance between them. @param[in] (uint) Index of the first cluster. @param[in] (uint) Index of the second cluster. ...	[ "def", "__calculate_nearest_distance", "(", "self", ",", "index_cluster1", ",", "index_cluster2", ")", ":", "candidate_minimum_distance", "=", "float", "(", "'Inf'", ")", "for", "index_object1", "in", "self", ".", "__clusters", "[", "index_cluster1", "]", ":", "fo...	45.789474	0.01464
def tensorrt_bind(symbol, ctx, all_params, type_dict=None, stype_dict=None, group2ctx=None, **kwargs): """Bind current symbol to get an optimized trt executor. Parameters ---------- symbol : Symbol The symbol you wish to bind, and optimize with TensorRT. ctx : Context ...	[ "def", "tensorrt_bind", "(", "symbol", ",", "ctx", ",", "all_params", ",", "type_dict", "=", "None", ",", "stype_dict", "=", "None", ",", "group2ctx", "=", "None", ",", "", "", "kwargs", ")", ":", "kwargs", "[", "'shared_buffer'", "]", "=", "all_params...	32.114286	0.001727
async def fetchone(self): """ Fetch next row """ self._check_executed() row = await self._read_next() if row is None: return self._rownumber += 1 return row	[ "async", "def", "fetchone", "(", "self", ")", ":", "self", ".", "_check_executed", "(", ")", "row", "=", "await", "self", ".", "_read_next", "(", ")", "if", "row", "is", "None", ":", "return", "self", ".", "_rownumber", "+=", "1", "return", "row" ]	26.125	0.009259
def _set_scores(self): """ Compute anomaly scores for the time series This algorithm just takes the diff of threshold with current value as anomaly score """ anom_scores = {} for timestamp, value in self.time_series.items(): anom_scores[timestamp] = 0.0 ...	[ "def", "_set_scores", "(", "self", ")", ":", "anom_scores", "=", "{", "}", "for", "timestamp", ",", "value", "in", "self", ".", "time_series", ".", "items", "(", ")", ":", "anom_scores", "[", "timestamp", "]", "=", "0.0", "if", "self", ".", "absolute_t...	57.230769	0.009259
def retrieve_file_from_RCSB(http_connection, resource, silent = True): '''Retrieve a file from the RCSB.''' if not silent: colortext.printf("Retrieving %s from RCSB" % os.path.split(resource)[1], color = "aqua") return http_connection.get(resource)	[ "def", "retrieve_file_from_RCSB", "(", "http_connection", ",", "resource", ",", "silent", "=", "True", ")", ":", "if", "not", "silent", ":", "colortext", ".", "printf", "(", "\"Retrieving %s from RCSB\"", "%", "os", ".", "path", ".", "split", "(", "resource", ...	52.8	0.022388
def is_nash(self, action_profile, tol=None): """ Return True if `action_profile` is a Nash equilibrium. Parameters ---------- action_profile : array_like(int or array_like(float)) An array of N objects, where each object must be an integer (pure action) o...	[ "def", "is_nash", "(", "self", ",", "action_profile", ",", "tol", "=", "None", ")", ":", "if", "self", ".", "N", "==", "2", ":", "for", "i", ",", "player", "in", "enumerate", "(", "self", ".", "players", ")", ":", "own_action", ",", "opponent_action"...	35.755556	0.00121
def find_file(path, filename, max_depth=5): """Returns full filepath if the file is in path or a subdirectory.""" for root, dirs, files in os.walk(path): if filename in files: return os.path.join(root, filename) # Don't search past max_depth depth = root[len(path) + 1:].count(os.sep) if depth...	[ "def", "find_file", "(", "path", ",", "filename", ",", "max_depth", "=", "5", ")", ":", "for", "root", ",", "dirs", ",", "files", "in", "os", ".", "walk", "(", "path", ")", ":", "if", "filename", "in", "files", ":", "return", "os", ".", "path", "...	33.545455	0.015831
def connect( self, login, password, authz_id=b"", starttls=False, authmech=None): """Establish a connection with the server. This function must be used. It read the server capabilities and wraps calls to STARTTLS and AUTHENTICATE commands. :param login: username...	[ "def", "connect", "(", "self", ",", "login", ",", "password", ",", "authz_id", "=", "b\"\"", ",", "starttls", "=", "False", ",", "authmech", "=", "None", ")", ":", "try", ":", "self", ".", "sock", "=", "socket", ".", "create_connection", "(", "(", "s...	38.074074	0.001898
def get_ca_signed_key(ca_name, CN='localhost', as_text=False, cacert_path=None, key_filename=None): ''' Get the certificate path or content ca_name name of the CA CN common name of the certificate ...	[ "def", "get_ca_signed_key", "(", "ca_name", ",", "CN", "=", "'localhost'", ",", "as_text", "=", "False", ",", "cacert_path", "=", "None", ",", "key_filename", "=", "None", ")", ":", "set_ca_path", "(", "cacert_path", ")", "if", "not", "key_filename", ":", ...	26.404255	0.000777
def set_default_command(self, command): """Sets a command function as the default command.""" cmd_name = command.name self.add_command(command) self.default_cmd_name = cmd_name	[ "def", "set_default_command", "(", "self", ",", "command", ")", ":", "cmd_name", "=", "command", ".", "name", "self", ".", "add_command", "(", "command", ")", "self", ".", "default_cmd_name", "=", "cmd_name" ]	40.8	0.009615
def collapse_segments (path): """Remove all redundant segments from the given URL path. Precondition: path is an unquoted url path""" # replace backslashes # note: this is _against_ the specification (which would require # backslashes to be left alone, and finally quoted with '%5C') # But replac...	[ "def", "collapse_segments", "(", "path", ")", ":", "# replace backslashes", "# note: this is _against_ the specification (which would require", "# backslashes to be left alone, and finally quoted with '%5C')", "# But replacing has several positive effects:", "# - Prevents path attacks on Windows...	43.870968	0.001439
def set_profiling_level(self, level, slow_ms=None, session=None): """Set the database's profiling level. :Parameters: - `level`: Specifies a profiling level, see list of possible values below. - `slow_ms`: Optionally modify the threshold for the profile to co...	[ "def", "set_profiling_level", "(", "self", ",", "level", ",", "slow_ms", "=", "None", ",", "session", "=", "None", ")", ":", "if", "not", "isinstance", "(", "level", ",", "int", ")", "or", "level", "<", "0", "or", "level", ">", "2", ":", "raise", "...	45.255814	0.001006
def plot_spectrum(self, filename=None, plot_db=True): """ Do a (slow) numpy FFT and take power of data """ header, data = self.read_next_data_block() print("Computing FFT...") d_xx_fft = np.abs(np.fft.fft(data[..., 0])) d_xx_fft = d_xx_fft.flatten() # Rebin to max numbe...	[ "def", "plot_spectrum", "(", "self", ",", "filename", "=", "None", ",", "plot_db", "=", "True", ")", ":", "header", ",", "data", "=", "self", ".", "read_next_data_block", "(", ")", "print", "(", "\"Computing FFT...\"", ")", "d_xx_fft", "=", "np", ".", "a...	30.777778	0.002334
def select(cls, args, kwargs): """Support read slaves.""" query = super(Model, cls).select(args, **kwargs) query.database = cls._get_read_database() return query	[ "def", "select", "(", "cls", ",", "", "args", ",", "", "", "kwargs", ")", ":", "query", "=", "super", "(", "Model", ",", "cls", ")", ".", "select", "(", "", "args", ",", "", "", "kwargs", ")", "query", ".", "database", "=", "cls", ".", ...	38.6	0.010152
def _iter_ns_range(self): """Iterates over self._ns_range, delegating to self._iter_key_range().""" while True: if self._current_key_range is None: query = self._ns_range.make_datastore_query() namespace_result = query.Get(1) if not namespace_result: break namesp...	[ "def", "_iter_ns_range", "(", "self", ")", ":", "while", "True", ":", "if", "self", ".", "_current_key_range", "is", "None", ":", "query", "=", "self", ".", "_ns_range", ".", "make_datastore_query", "(", ")", "namespace_result", "=", "query", ".", "Get", "...	37.740741	0.008612
def _print(self, *args): """ internal print to self.fobj """ string = u" ".join(args) + '\n' self.fobj.write(string)	[ "def", "_print", "(", "self", ",", "*", "args", ")", ":", "string", "=", "u\" \"", ".", "join", "(", "args", ")", "+", "'\\n'", "self", ".", "fobj", ".", "write", "(", "string", ")" ]	34.25	0.014286
def run(self): """Runs the build extension.""" compiler = new_compiler(compiler=self.compiler) if compiler.compiler_type == "msvc": self.define = [ ("UNICODE", ""), ] else: command = "sh configure --disable-shared-libs" output = self._RunCommand(command) print_l...	[ "def", "run", "(", "self", ")", ":", "compiler", "=", "new_compiler", "(", "compiler", "=", "self", ".", "compiler", ")", "if", "compiler", ".", "compiler_type", "==", "\"msvc\"", ":", "self", ".", "define", "=", "[", "(", "\"UNICODE\"", ",", "\"\"", "...	22.888889	0.013975
def field_specific_errors(self): """Returns a dictionary of field-specific validation errors for this row.""" return { key: value for key, value in self.error_dict.items() if key != NON_FIELD_ERRORS }	[ "def", "field_specific_errors", "(", "self", ")", ":", "return", "{", "key", ":", "value", "for", "key", ",", "value", "in", "self", ".", "error_dict", ".", "items", "(", ")", "if", "key", "!=", "NON_FIELD_ERRORS", "}" ]	40.5	0.012097
def randtuple(self): """ -> a #tuple of random #int """ return tuple( self.randint for x in range(0, self.random.randint(3, 10)))	[ "def", "randtuple", "(", "self", ")", ":", "return", "tuple", "(", "self", ".", "randint", "for", "x", "in", "range", "(", "0", ",", "self", ".", "random", ".", "randint", "(", "3", ",", "10", ")", ")", ")" ]	33	0.011834
def start_engines(opts, proc_mgr, proxy=None): ''' Fire up the configured engines! ''' utils = salt.loader.utils(opts, proxy=proxy) if opts['__role'] == 'master': runners = salt.loader.runner(opts, utils=utils) else: runners = [] funcs = salt.loader.minion_mods(opts, utils=ut...	[ "def", "start_engines", "(", "opts", ",", "proc_mgr", ",", "proxy", "=", "None", ")", ":", "utils", "=", "salt", ".", "loader", ".", "utils", "(", "opts", ",", "proxy", "=", "proxy", ")", "if", "opts", "[", "'__role'", "]", "==", "'master'", ":", "...	36.482759	0.00046
def submit(self, fn, args, kwargs): """Submit an operation""" corofn = asyncio.coroutine(lambda: fn(args, **kwargs)) return run_coroutine_threadsafe(corofn(), self.loop)	[ "def", "submit", "(", "self", ",", "fn", ",", "", "args", ",", "", "", "kwargs", ")", ":", "corofn", "=", "asyncio", ".", "coroutine", "(", "lambda", ":", "fn", "(", "", "args", ",", "", "", "kwargs", ")", ")", "return", "run_coroutine_thread...	48.5	0.010152
def get_formatted_content(self, pyobj): '''typecode data --> text ''' u = urlencode(pyobj, self.reserved) return String.get_formatted_content(self, u)	[ "def", "get_formatted_content", "(", "self", ",", "pyobj", ")", ":", "u", "=", "urlencode", "(", "pyobj", ",", "self", ".", "reserved", ")", "return", "String", ".", "get_formatted_content", "(", "self", ",", "u", ")" ]	31.666667	0.020513
def rename(self, new_relation): """Rename this cached relation to new_relation. Note that this will change the output of key(), all refs must be updated! :param _CachedRelation new_relation: The new name to apply to the relation """ # Relations store this stu...	[ "def", "rename", "(", "self", ",", "new_relation", ")", ":", "# Relations store this stuff inside their `path` dict. But they", "# also store a table_name, and usually use it in their .render(),", "# so we need to update that as well. It doesn't appear that", "# table_name is ever anything bu...	43.3	0.00226
def delete(self): """Get rid of this, starting now. Apart from deleting the node, this also informs all its users that it doesn't exist and therefore can't be their avatar anymore. """ if self.name in self.character.portal: del self.character.portal[self.nam...	[ "def", "delete", "(", "self", ")", ":", "if", "self", ".", "name", "in", "self", ".", "character", ".", "portal", ":", "del", "self", ".", "character", ".", "portal", "[", "self", ".", "name", "]", "if", "self", ".", "name", "in", "self", ".", "c...	37.5	0.002
def schedule_in(self, job, timedelta): """ Schedule job to run at datetime.timedelta from now.""" now = long(self._now() * 1e6) when = now + timedelta.total_seconds() * 1e6 self.schedule(job, when)	[ "def", "schedule_in", "(", "self", ",", "job", ",", "timedelta", ")", ":", "now", "=", "long", "(", "self", ".", "_now", "(", ")", "", "1e6", ")", "when", "=", "now", "+", "timedelta", ".", "total_seconds", "(", ")", "", "1e6", "self", ".", "sc...	45	0.008734
async def _rank_text(self, choices): """ Try to match the TextLayer with choice's intents. """ tl = self.request.get_layer(l.RawText) best = 0.0 for slug, params in choices.items(): strings = [] if params['intent']: intent = geta...	[ "async", "def", "_rank_text", "(", "self", ",", "choices", ")", ":", "tl", "=", "self", ".", "request", ".", "get_layer", "(", "l", ".", "RawText", ")", "best", "=", "0.0", "for", "slug", ",", "params", "in", "choices", ".", "items", "(", ")", ":",...	29.714286	0.002328
def update_validators(): """ Call this to updade the global nrml.validators """ validators.update({ 'fragilityFunction.id': valid.utf8, # taxonomy 'vulnerabilityFunction.id': valid.utf8, # taxonomy 'consequenceFunction.id': valid.utf8, # taxonomy 'asset.id': valid.asse...	[ "def", "update_validators", "(", ")", ":", "validators", ".", "update", "(", "{", "'fragilityFunction.id'", ":", "valid", ".", "utf8", ",", "# taxonomy", "'vulnerabilityFunction.id'", ":", "valid", ".", "utf8", ",", "# taxonomy", "'consequenceFunction.id'", ":", "...	41.203704	0.000439
def _split_fit_score_trial(self, X, y, idx=0): """ Splits the dataset, fits a clone of the estimator, then scores it according to the required metrics. The index of the split is added to the random_state if the random_state is not None; this ensures that every split is shuffled ...	[ "def", "_split_fit_score_trial", "(", "self", ",", "X", ",", "y", ",", "idx", "=", "0", ")", ":", "random_state", "=", "self", ".", "random_state", "if", "random_state", "is", "not", "None", ":", "random_state", "+=", "idx", "splitter", "=", "self", ".",...	39.25	0.001657
def response(credentials, password, request): """Compile digest auth response If the qop directive's value is "auth" or "auth-int" , then compute the response as follows: RESPONSE = MD5(HA1:nonce:nonceCount:clienNonce:qop:HA2) Else if the qop directive is unspecified, then compute the response as fo...	[ "def", "response", "(", "credentials", ",", "password", ",", "request", ")", ":", "response", "=", "None", "algorithm", "=", "credentials", ".", "get", "(", "'algorithm'", ")", "HA1_value", "=", "HA1", "(", "credentials", ".", "get", "(", "'realm'", ")", ...	39.738095	0.002339
def iter_extensions(prefix, event_id): """Return extension (prefix + event_id) with an optional suffix which is incremented step by step in case of collision """ extension = '{prefix}{event_id}'.format(prefix=prefix, event_id=event_id) yield extension suffix = 1 while True: yield ...	[ "def", "iter_extensions", "(", "prefix", ",", "event_id", ")", ":", "extension", "=", "'{prefix}{event_id}'", ".", "format", "(", "prefix", "=", "prefix", ",", "event_id", "=", "event_id", ")", "yield", "extension", "suffix", "=", "1", "while", "True", ":", ...	39.5	0.002475
def _get_file(self, path, prepend=False): '''Extracts a file from dap to a file-like object''' if prepend: path = os.path.join(self._dirname(), path) extracted = self._tar.extractfile(path) if extracted: return extracted raise DapFileError(('Could not read...	[ "def", "_get_file", "(", "self", ",", "path", ",", "prepend", "=", "False", ")", ":", "if", "prepend", ":", "path", "=", "os", ".", "path", ".", "join", "(", "self", ".", "_dirname", "(", ")", ",", "path", ")", "extracted", "=", "self", ".", "_ta...	47.777778	0.009132
def _dens(self,R,z,phi=0.,t=0.): """ NAME: _dens PURPOSE: evaluate the density for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT: the densi...	[ "def", "_dens", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ")", ":", "r", "=", "nu", ".", "sqrt", "(", "R", "", "2.", "+", "z", "", "2.", ")", "return", "1.", "/", "r", "**", "self", ".", "alpha", "...	26	0.014433
def gru(num_hidden, indata, prev_state, param, seqidx, layeridx, dropout=0., is_batchnorm=False, gamma=None, beta=None, name=None): """ GRU Cell symbol Reference: * Chung, Junyoung, et al. "Empirical evaluation of gated recurrent neural networks on sequence modeling." arXiv preprint arXiv:1412.3...	[ "def", "gru", "(", "num_hidden", ",", "indata", ",", "prev_state", ",", "param", ",", "seqidx", ",", "layeridx", ",", "dropout", "=", "0.", ",", "is_batchnorm", "=", "False", ",", "gamma", "=", "None", ",", "beta", "=", "None", ",", "name", "=", "Non...	54.130435	0.002367
def posterior(self, x, Sigma=None): """Posterior for model: X1, ..., Xn ~ N(theta, Sigma). Parameters ---------- x: (n, d) ndarray data Sigma: (d, d) ndarray (fixed) covariance matrix in the model """ n = x.shape[0] Sigma...	[ "def", "posterior", "(", "self", ",", "x", ",", "Sigma", "=", "None", ")", ":", "n", "=", "x", ".", "shape", "[", "0", "]", "Sigma", "=", "np", ".", "eye", "(", "self", ".", "dim", ")", "if", "Sigma", "is", "None", "else", "Sigma", "Siginv", ...	33.555556	0.009662
def user_present(name, password, email, tenant=None, enabled=True, roles=None, profile=None, password_reset=True, project=None, **connection_args): ''' Ensure ...	[ "def", "user_present", "(", "name", ",", "password", ",", "email", ",", "tenant", "=", "None", ",", "enabled", "=", "True", ",", "roles", "=", "None", ",", "profile", "=", "None", ",", "password_reset", "=", "True", ",", "project", "=", "None", ",", ...	40.691542	0.001193
def retry(dargs, *dkwargs): """ The retry decorator. Can be passed all the arguments that are accepted by Retry.__init__. """ # support both @retry and @retry() as valid syntax if len(dargs) == 1 and callable(dargs[0]): def wrap_simple(f): @_wraps(f) def wrappe...	[ "def", "retry", "(", "", "dargs", ",", "", "*", "dkwargs", ")", ":", "# support both @retry and @retry() as valid syntax", "if", "len", "(", "dargs", ")", "==", "1", "and", "callable", "(", "dargs", "[", "0", "]", ")", ":", "def", "wrap_simple", "(", "...	23.592593	0.001508
def deployment_delete(name, resource_group, **kwargs): ''' .. versionadded:: 2019.2.0 Delete a deployment. :param name: The name of the deployment to delete. :param resource_group: The resource group name assigned to the deployment. CLI Example: .. code-block:: bash sal...	[ "def", "deployment_delete", "(", "name", ",", "resource_group", ",", "", "", "kwargs", ")", ":", "result", "=", "False", "resconn", "=", "__utils__", "[", "'azurearm.get_client'", "]", "(", "'resource'", ",", "", "", "kwargs", ")", "try", ":", "deploy"...	24.709677	0.001256
def bind_to(self, table, name): """ Bind this column to a table, and assign it a name. This method can only be called once per instance, because a Column cannot be bound to multiple tables. (The sort order would be ambiguous.) """ if self.bound_to is not None: ...	[ "def", "bind_to", "(", "self", ",", "table", ",", "name", ")", ":", "if", "self", ".", "bound_to", "is", "not", "None", ":", "raise", "AttributeError", "(", "\"Column is already bound to '%s' as '%s'\"", "%", "self", ".", "bound_to", ")", "self", ".", "bound...	38.833333	0.008386
def get_driver_script_catalog(name): # noqa: E501 """Retrieve the script catalog Retrieve the script catalog # noqa: E501 :param name: Get status of a driver with this name :type name: str :rtype: Response """ response = errorIfUnauthorized(role='user') if response: return r...	[ "def", "get_driver_script_catalog", "(", "name", ")", ":", "# noqa: E501", "response", "=", "errorIfUnauthorized", "(", "role", "=", "'user'", ")", "if", "response", ":", "return", "response", "else", ":", "response", "=", "ApitaxResponse", "(", ")", "driver", ...	24.181818	0.001808
def percent_pareto_durations(records, percentage=0.8): """ The percentage of user's contacts that account for 80% of its total time spend on the phone. Optionally takes a percentage argument as a decimal (e.g., .8 for 80%). """ if len(records) == 0: return None user_count = defaultd...	[ "def", "percent_pareto_durations", "(", "records", ",", "percentage", "=", "0.8", ")", ":", "if", "len", "(", "records", ")", "==", "0", ":", "return", "None", "user_count", "=", "defaultdict", "(", "int", ")", "for", "r", "in", "records", ":", "if", "...	33.909091	0.001304
def lines_to_path(lines): """ Turn line segments into a Path2D or Path3D object. Parameters ------------ lines : (n, 2, dimension) or (n, dimension) float Line segments or connected polyline curve in 2D or 3D Returns ----------- kwargs : dict kwargs for Path constructor ...	[ "def", "lines_to_path", "(", "lines", ")", ":", "lines", "=", "np", ".", "asanyarray", "(", "lines", ",", "dtype", "=", "np", ".", "float64", ")", "if", "util", ".", "is_shape", "(", "lines", ",", "(", "-", "1", ",", "(", "2", ",", "3", ")", ")...	35.783784	0.000735
def get_project(self, project_id): """ http://confluence.jetbrains.net/display/YTD2/GET+project """ return youtrack.Project(self._get("/admin/project/" + urlquote(project_id)), self)	[ "def", "get_project", "(", "self", ",", "project_id", ")", ":", "return", "youtrack", ".", "Project", "(", "self", ".", "_get", "(", "\"/admin/project/\"", "+", "urlquote", "(", "project_id", ")", ")", ",", "self", ")" ]	50.75	0.014563
def list_download_tasks(self, need_task_info="1", asc="0", start=0, create_time=None, limit=1000, status="255", source_url=None, remote_path=None, *kwargs): """查询离线下载任务ID列表及任务信息. :param need_task_info: 是否需要返回任务信息: 0：不需要 ...	[ "def", "list_download_tasks", "(", "self", ",", "need_task_info", "=", "\"1\"", ",", "asc", "=", "\"0\"", ",", "start", "=", "0", ",", "create_time", "=", "None", ",", "limit", "=", "1000", ",", "status", "=", "\"255\"", ",", "source_url", "=", "None", ...	27.536082	0.001807
def simpleAttrs(self): """provide a copy of this player's attributes as a dictionary, but with objects flattened into a string representation of the object""" simpleAttrs = {} for k,v in iteritems(self.attrs): if k in ["_matches"]: continue # attributes to specifically ignore ...	[ "def", "simpleAttrs", "(", "self", ")", ":", "simpleAttrs", "=", "{", "}", "for", "k", ",", "v", "in", "iteritems", "(", "self", ".", "attrs", ")", ":", "if", "k", "in", "[", "\"_matches\"", "]", ":", "continue", "# attributes to specifically ignore", "t...	51.875	0.021327
def job_listener(event): '''Listens to completed job''' job_id = event.job.args[0] if event.code == events.EVENT_JOB_MISSED: db.mark_job_as_missed(job_id) elif event.exception: if isinstance(event.exception, util.JobError): error_object = event.exception.as_dict() el...	[ "def", "job_listener", "(", "event", ")", ":", "job_id", "=", "event", ".", "job", ".", "args", "[", "0", "]", "if", "event", ".", "code", "==", "events", ".", "EVENT_JOB_MISSED", ":", "db", ".", "mark_job_as_missed", "(", "job_id", ")", "elif", "event...	34.68	0.002245
def endure(self, key, persist_to=-1, replicate_to=-1, cas=0, check_removed=False, timeout=5.0, interval=0.010): """Wait until a key has been distributed to one or more nodes By default, when items are stored to Couchbase, the operation is considered successful if the vBucket mast...	[ "def", "endure", "(", "self", ",", "key", ",", "persist_to", "=", "-", "1", ",", "replicate_to", "=", "-", "1", ",", "cas", "=", "0", ",", "check_removed", "=", "False", ",", "timeout", "=", "5.0", ",", "interval", "=", "0.010", ")", ":", "# We rea...	50.301205	0.000705
def oom_components(Ct, C2t, rank_ind=None, lcc=None, tol_one=1e-2): """ Compute OOM components and eigenvalues from count matrices: Parameters ---------- Ct : ndarray(N, N) count matrix from data C2t : sparse csc-matrix (N*N, N) two-step count matrix from data for all states, co...	[ "def", "oom_components", "(", "Ct", ",", "C2t", ",", "rank_ind", "=", "None", ",", "lcc", "=", "None", ",", "tol_one", "=", "1e-2", ")", ":", "import", "msmtools", ".", "estimation", "as", "me", "# Decompose count matrix by SVD:", "if", "lcc", "is", "not",...	31.025	0.001171
def assertFileSizeNotAlmostEqual( self, filename, size, places=None, msg=None, delta=None): '''Fail unless ``filename`` does not have the given ``size`` as determined by their difference rounded to the given number ofdecimal ``places`` (default 7) and comparing to zero, or if ...	[ "def", "assertFileSizeNotAlmostEqual", "(", "self", ",", "filename", ",", "size", ",", "places", "=", "None", ",", "msg", "=", "None", ",", "delta", "=", "None", ")", ":", "fsize", "=", "self", ".", "_get_file_size", "(", "filename", ")", "self", ".", ...	35.961538	0.002083
def makeLeu(segID, N, CA, C, O, geo): '''Creates a Leucine residue''' ##R-Group CA_CB_length=geo.CA_CB_length C_CA_CB_angle=geo.C_CA_CB_angle N_C_CA_CB_diangle=geo.N_C_CA_CB_diangle CB_CG_length=geo.CB_CG_length CA_CB_CG_angle= geo.CA_CB_CG_angle N_CA_CB_CG_diangle=geo.N_CA_CB_CG_diangl...	[ "def", "makeLeu", "(", "segID", ",", "N", ",", "CA", ",", "C", ",", "O", ",", "geo", ")", ":", "##R-Group", "CA_CB_length", "=", "geo", ".", "CA_CB_length", "C_CA_CB_angle", "=", "geo", ".", "C_CA_CB_angle", "N_C_CA_CB_diangle", "=", "geo", ".", "N_C_CA_...	36.153846	0.02279
def insertRnaQuantificationSet(self, rnaQuantificationSet): """ Inserts a the specified rnaQuantificationSet into this repository. """ try: models.Rnaquantificationset.create( id=rnaQuantificationSet.getId(), datasetid=rnaQuantificationSet.getP...	[ "def", "insertRnaQuantificationSet", "(", "self", ",", "rnaQuantificationSet", ")", ":", "try", ":", "models", ".", "Rnaquantificationset", ".", "create", "(", "id", "=", "rnaQuantificationSet", ".", "getId", "(", ")", ",", "datasetid", "=", "rnaQuantificationSet"...	50.1875	0.002445
def result(self, timeout=None): """Gets the result of the task. Arguments: timeout: Maximum seconds to wait for a result before raising a TimeoutError. If set to None, this will wait forever. If the queue doesn't store results and timeout is None, this call w...	[ "def", "result", "(", "self", ",", "timeout", "=", "None", ")", ":", "start", "=", "time", ".", "time", "(", ")", "while", "True", ":", "task", "=", "self", ".", "get_task", "(", ")", "if", "not", "task", "or", "task", ".", "status", "not", "in",...	33.375	0.002427
def _generate_notebooks(table, timestamp_column, engine, crypto_factory, min_dt, max_dt, logger): """ See docstrings for `generate_files` and `generate_checkpoints`. Parameters ---------- table : SQLAlchemy.Table Table to fetch notebooks from, `files` or `remote_chec...	[ "def", "_generate_notebooks", "(", "table", ",", "timestamp_column", ",", "engine", ",", "crypto_factory", ",", "min_dt", ",", "max_dt", ",", "logger", ")", ":", "where_conds", "=", "[", "]", "if", "min_dt", "is", "not", "None", ":", "where_conds", ".", "a...	40.641791	0.000359
def asHdl(cls, obj, ctx: HwtSerializerCtx): """ Convert object to HDL string :param obj: object to serialize :param ctx: HwtSerializerCtx instance """ if isinstance(obj, RtlSignalBase): return cls.SignalItem(obj, ctx) elif isinstance(obj, Value): ...	[ "def", "asHdl", "(", "cls", ",", "obj", ",", "ctx", ":", "HwtSerializerCtx", ")", ":", "if", "isinstance", "(", "obj", ",", "RtlSignalBase", ")", ":", "return", "cls", ".", "SignalItem", "(", "obj", ",", "ctx", ")", "elif", "isinstance", "(", "obj", ...	29.25	0.002364
def forward_word_end_extend_selection(self, e): # u"""Move forward to the end of the next word. Words are composed of letters and digits.""" self.l_buffer.forward_word_end_extend_selection(self.argument_reset) self.finalize()	[ "def", "forward_word_end_extend_selection", "(", "self", ",", "e", ")", ":", "# \r", "self", ".", "l_buffer", ".", "forward_word_end_extend_selection", "(", "self", ".", "argument_reset", ")", "self", ".", "finalize", "(", ")" ]	51.6	0.015267
def prepare(_next, self): """Hook after prepare and set 'portrait' as image widget to ``self.form``. """ _next(self) if not self.portrait_support: return model = self.model request = self.request if request.has_permission('edit_user', model.par...	[ "def", "prepare", "(", "_next", ",", "self", ")", ":", "_next", "(", "self", ")", "if", "not", "self", ".", "portrait_support", ":", "return", "model", "=", "self", ".", "model", "request", "=", "self", ".", "request", "if", "request", ".", "has_permis...	37.5625	0.001081
def get_all_invitations(self, kwargs): # noqa: E501 """Get the details of all the user invitations. # noqa: E501 An endpoint for retrieving the details of all the active user invitations sent for new or existing users to join the account. Example usage:** `curl https://api.us-east-1.mbedcloud.c...	[ "def", "get_all_invitations", "(", "self", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'asynchronous'", ")", ":", "return", "self", ".", "get_all_invitations_...	58.521739	0.001462
def do_mailfy(self, query, **kwargs): """ Verifying a mailfy query in this platform. This might be redefined in any class inheriting from Platform. The only condition is that any of this should return an equivalent array. Args: ----- query: The element to be...	[ "def", "do_mailfy", "(", "self", ",", "query", ",", "", "", "kwargs", ")", ":", "if", "self", ".", "check_mailfy", "(", "query", ",", "kwargs", ")", ":", "expandedEntities", "=", "general", ".", "expandEntitiesFromEmail", "(", "query", ")", "r", "=", ...	31.672414	0.001584
def bounce_local(drain=False): ''' Bounce Traffic Server on the local node. Bouncing Traffic Server shuts down and immediately restarts the Traffic Server node. drain This option modifies the restart behavior such that traffic_server is not shut down until the number of active client co...	[ "def", "bounce_local", "(", "drain", "=", "False", ")", ":", "if", "_TRAFFICCTL", ":", "cmd", "=", "_traffic_ctl", "(", "'server'", ",", "'restart'", ")", "else", ":", "cmd", "=", "_traffic_line", "(", "'-b'", ")", "if", "drain", ":", "cmd", "=", "cmd"...	28.923077	0.001287
async def reportCompleted(self, args, *kwargs): """ Report Run Completed Report a task completed, resolving the run as `completed`. This method gives output: ``v1/task-status-response.json#`` This method is ``stable`` """ return await self._makeApiCall(self....	[ "async", "def", "reportCompleted", "(", "self", ",", "", "args", ",", "", "", "kwargs", ")", ":", "return", "await", "self", ".", "_makeApiCall", "(", "self", ".", "funcinfo", "[", "\"reportCompleted\"", "]", ",", "", "args", ",", "", "", "kwargs...	29.5	0.008219
def download(self, storagemodel:object, modeldefinition = None): """ load blob from storage into StorageBlobModelInstance """ if (storagemodel.name is None): # No content to download raise AzureStorageWrapException(storagemodel, "StorageBlobModel does not contain content nor con...	[ "def", "download", "(", "self", ",", "storagemodel", ":", "object", ",", "modeldefinition", "=", "None", ")", ":", "if", "(", "storagemodel", ".", "name", "is", "None", ")", ":", "# No content to download", "raise", "AzureStorageWrapException", "(", "storagemode...	45.32	0.009507

def map_concepts_to_indicators( self, n: int = 1, min_temporal_res: Optional[str] = None ): """ Map each concept node in the AnalysisGraph instance to one or more tangible quantities, known as 'indicators'. Args: n: Number of matches to keep min_temporal_res:...

[ "def", "map_concepts_to_indicators", "(", "self", ",", "n", ":", "int", "=", "1", ",", "min_temporal_res", ":", "Optional", "[", "str", "]", "=", "None", ")", ":", "for", "node", "in", "self", ".", "nodes", "(", "data", "=", "True", ")", ":", "query_...

35.8

0.001813

def vcf_writer(parser, keep, extract, args): """Writes the data in VCF format.""" # The output output = sys.stdout if args.output == "-" else open(args.output, "w") try: # Getting the samples samples = np.array(parser.get_samples(), dtype=str) k = _get_sample_select(samples=samp...

[ "def", "vcf_writer", "(", "parser", ",", "keep", ",", "extract", ",", "args", ")", ":", "# The output", "output", "=", "sys", ".", "stdout", "if", "args", ".", "output", "==", "\"-\"", "else", "open", "(", "args", ".", "output", ",", "\"w\"", ")", "t...

32.346154

0.000577

def _wrapper_find_one(self, filter_=None, *args, **kwargs): """Convert record to a dict that has no key error """ return self.__collect.find_one(filter_, *args, **kwargs)

[ "def", "_wrapper_find_one", "(", "self", ",", "filter_", "=", "None", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "return", "self", ".", "__collect", ".", "find_one", "(", "filter_", ",", "*", "args", ",", "*", "*", "kwargs", ")" ]

47.75

0.010309

def reverse( self, query, exactly_one=DEFAULT_SENTINEL, timeout=DEFAULT_SENTINEL, feature_code=None, lang=None, find_nearby_type='findNearbyPlaceName', ): """ Return an address by location point. .. vers...

[ "def", "reverse", "(", "self", ",", "query", ",", "exactly_one", "=", "DEFAULT_SENTINEL", ",", "timeout", "=", "DEFAULT_SENTINEL", ",", "feature_code", "=", "None", ",", "lang", "=", "None", ",", "find_nearby_type", "=", "'findNearbyPlaceName'", ",", ")", ":",...

39.686275

0.001928

async def run_handler(self, request: RPCRequest) -> Union[RPCReply, RPCError]: """ Process a JSON RPC request :param RPCRequest request: JSON RPC request :return: JSON RPC reply """ with catch_warnings(record=True) as warnings: try: rpc_handle...

[ "async", "def", "run_handler", "(", "self", ",", "request", ":", "RPCRequest", ")", "->", "Union", "[", "RPCReply", ",", "RPCError", "]", ":", "with", "catch_warnings", "(", "record", "=", "True", ")", "as", "warnings", ":", "try", ":", "rpc_handler", "=...

38.029412

0.002262

def current(self): """Returns the current (token, position) or (EndOfFile, EndOfFile)""" if self.index >= self.len: self._fill((self.index - self.len) + 1) return self.index < self.len and self.buffer[self.index] or (EndOfFile, EndOfFile)

[ "def", "current", "(", "self", ")", ":", "if", "self", ".", "index", ">=", "self", ".", "len", ":", "self", ".", "_fill", "(", "(", "self", ".", "index", "-", "self", ".", "len", ")", "+", "1", ")", "return", "self", ".", "index", "<", "self", ...

54

0.010949

def split_docstring(value): """ Splits the docstring of the given value into it's summary and body. :returns: a 2-tuple of the format ``(summary, body)`` """ docstring = textwrap.dedent(getattr(value, '__doc__', '')) if not docstring: return None pieces = docstring.strip().split('\...

[ "def", "split_docstring", "(", "value", ")", ":", "docstring", "=", "textwrap", ".", "dedent", "(", "getattr", "(", "value", ",", "'__doc__'", ",", "''", ")", ")", "if", "not", "docstring", ":", "return", "None", "pieces", "=", "docstring", ".", "strip",...

25.176471

0.002252

def cmbuild_from_alignment(aln, structure_string, refine=False, \ return_alignment=False,params=None): """Uses cmbuild to build a CM file given an alignment and structure string. - aln: an Alignment object or something that can be used to construct one. All sequences must be the same lengt...

[ "def", "cmbuild_from_alignment", "(", "aln", ",", "structure_string", ",", "refine", "=", "False", ",", "return_alignment", "=", "False", ",", "params", "=", "None", ")", ":", "aln", "=", "Alignment", "(", "aln", ")", "if", "len", "(", "structure_string", ...

39.672414

0.009754

def get_abbreviation_of(self, name): """Get abbreviation of a language.""" for language in self.user_data.languages: if language['language_string'] == name: return language['language'] return None

[ "def", "get_abbreviation_of", "(", "self", ",", "name", ")", ":", "for", "language", "in", "self", ".", "user_data", ".", "languages", ":", "if", "language", "[", "'language_string'", "]", "==", "name", ":", "return", "language", "[", "'language'", "]", "r...

40.5

0.008065

def pull(image, insecure_registry=False, api_response=False, client_timeout=salt.utils.docker.CLIENT_TIMEOUT): ''' .. versionchanged:: 2018.3.0 If no tag is specified in the ``image`` argument, all tags for the image will be pulled. For this reason is it recommended to...

[ "def", "pull", "(", "image", ",", "insecure_registry", "=", "False", ",", "api_response", "=", "False", ",", "client_timeout", "=", "salt", ".", "utils", ".", "docker", ".", "CLIENT_TIMEOUT", ")", ":", "_prep_pull", "(", ")", "kwargs", "=", "{", "'stream'"...

30.680412

0.000326

def __parse_entry(entry_line): """Parse the SOFT file entry name line that starts with '^', '!' or '#'. Args: entry_line (:obj:`str`): Line from SOFT to be parsed. Returns: :obj:`2-tuple`: Type of entry, value of entry. """ if entry_line.startswith("!"): entry_line = sub(...

[ "def", "__parse_entry", "(", "entry_line", ")", ":", "if", "entry_line", ".", "startswith", "(", "\"!\"", ")", ":", "entry_line", "=", "sub", "(", "r\"!\\w*?_\"", ",", "''", ",", "entry_line", ")", "else", ":", "entry_line", "=", "entry_line", ".", "strip"...

31

0.001565

def __calculate_changes(self, updated_centers): """! @brief Calculate changes between centers. @return (float) Maximum change between centers. """ changes = numpy.sum(numpy.square(self.__centers - updated_centers), axis=1).T return numpy.max(changes)

[ "def", "__calculate_changes", "(", "self", ",", "updated_centers", ")", ":", "changes", "=", "numpy", ".", "sum", "(", "numpy", ".", "square", "(", "self", ".", "__centers", "-", "updated_centers", ")", ",", "axis", "=", "1", ")", ".", "T", "return", "...

33.333333

0.00974

def purge_existing_ovb(nova_api, neutron): """Purge any trace of an existing OVB deployment. """ LOG.info('Cleaning up OVB environment from the tenant.') for server in nova_api.servers.list(): if server.name in ('bmc', 'undercloud'): server.delete() if server.name.startswith(...

[ "def", "purge_existing_ovb", "(", "nova_api", ",", "neutron", ")", ":", "LOG", ".", "info", "(", "'Cleaning up OVB environment from the tenant.'", ")", "for", "server", "in", "nova_api", ".", "servers", ".", "list", "(", ")", ":", "if", "server", ".", "name", ...

45.339286

0.001928

def optplot(modes=('absorption',), filenames=None, prefix=None, directory=None, gaussian=None, band_gaps=None, labels=None, average=True, height=6, width=6, xmin=0, xmax=None, ymin=0, ymax=1e5, colours=None, style=None, no_base_style=None, image_format='pdf', dpi=400, plt...

[ "def", "optplot", "(", "modes", "=", "(", "'absorption'", ",", ")", ",", "filenames", "=", "None", ",", "prefix", "=", "None", ",", "directory", "=", "None", ",", "gaussian", "=", "None", ",", "band_gaps", "=", "None", ",", "labels", "=", "None", ","...

47.480315

0.000325

def in6_get_common_plen(a, b): """ Return common prefix length of IPv6 addresses a and b. """ def matching_bits(byte1, byte2): for i in range(8): cur_mask = 0x80 >> i if (byte1 & cur_mask) != (byte2 & cur_mask): return i return 8 tmpA = inet_p...

[ "def", "in6_get_common_plen", "(", "a", ",", "b", ")", ":", "def", "matching_bits", "(", "byte1", ",", "byte2", ")", ":", "for", "i", "in", "range", "(", "8", ")", ":", "cur_mask", "=", "0x80", ">>", "i", "if", "(", "byte1", "&", "cur_mask", ")", ...

28.888889

0.001862

def if_features(self, stmt: Statement, mid: ModuleId) -> bool: """Evaluate ``if-feature`` substatements on a statement, if any. Args: stmt: Yang statement that is tested on if-features. mid: Identifier of the module in which `stmt` is present. Raises: Module...

[ "def", "if_features", "(", "self", ",", "stmt", ":", "Statement", ",", "mid", ":", "ModuleId", ")", "->", "bool", ":", "iffs", "=", "stmt", ".", "find_all", "(", "\"if-feature\"", ")", "if", "not", "iffs", ":", "return", "True", "for", "i", "in", "if...

38.666667

0.002404

def make_common_parser(): """ Creates an argument parser (argparse module) with the options that should be common to all shells. The result can be used as a parent parser (``parents`` argument in ``argparse.ArgumentParser``) :return: An ArgumentParser object """ parser = argparse.Argum...

[ "def", "make_common_parser", "(", ")", ":", "parser", "=", "argparse", ".", "ArgumentParser", "(", "add_help", "=", "False", ")", "# Version number", "parser", ".", "add_argument", "(", "\"--version\"", ",", "action", "=", "\"version\"", ",", "version", "=", "...

26.423077

0.000468

def _remote_connection(server, opts, argparser_): """Initiate a remote connection, via PyWBEM. Arguments for the request are part of the command line arguments and include user name, password, namespace, etc. """ global CONN # pylint: disable=global-statement if opts.timeout is not N...

[ "def", "_remote_connection", "(", "server", ",", "opts", ",", "argparser_", ")", ":", "global", "CONN", "# pylint: disable=global-statement", "if", "opts", ".", "timeout", "is", "not", "None", ":", "if", "opts", ".", "timeout", "<", "0", "or", "opts", ".", ...

33.608696

0.000419

def block(self, userId, minute): """ 封禁用户方法（每秒钟限 100 次）方法 @param userId:用户 Id。（必传） @param minute:封禁时长,单位为分钟，最大值为43200分钟。（必传） @return code:返回码，200 为正常。 @return errorMessage:错误信息。 """ desc = { "name": "CodeSuccessReslut", "desc": ...

[ "def", "block", "(", "self", ",", "userId", ",", "minute", ")", ":", "desc", "=", "{", "\"name\"", ":", "\"CodeSuccessReslut\"", ",", "\"desc\"", ":", "\" http 成功返回结果\",", "", "\"fields\"", ":", "[", "{", "\"name\"", ":", "\"code\"", ",", "\"type\"", ":", ...

28.793103

0.00927

def genrows(cursor: Cursor, arraysize: int = 1000) \ -> Generator[List[Any], None, None]: """ Generate all rows from a cursor. Args: cursor: the cursor arraysize: split fetches into chunks of this many records Yields: each row """ # http://code.activestate.com/r...

[ "def", "genrows", "(", "cursor", ":", "Cursor", ",", "arraysize", ":", "int", "=", "1000", ")", "->", "Generator", "[", "List", "[", "Any", "]", ",", "None", ",", "None", "]", ":", "# http://code.activestate.com/recipes/137270-use-generators-for-fetching-large-db-...

28.052632

0.001815

def rotate(compound, theta, around): """Rotate a compound around an arbitrary vector. Parameters ---------- compound : mb.Compound The compound being rotated. theta : float The angle by which to rotate the compound, in radians. around : np.ndarray, shape=(3,), dtype=float ...

[ "def", "rotate", "(", "compound", ",", "theta", ",", "around", ")", ":", "around", "=", "np", ".", "asarray", "(", "around", ")", ".", "reshape", "(", "3", ")", "if", "np", ".", "array_equal", "(", "around", ",", "np", ".", "zeros", "(", "3", ")"...

35.210526

0.001456

def path_param(name, ns): """ Build a path parameter definition. """ if ns.identifier_type == "uuid": param_type = "string" param_format = "uuid" else: param_type = "string" param_format = None kwargs = { "name": name, "in": "path", "requ...

[ "def", "path_param", "(", "name", ",", "ns", ")", ":", "if", "ns", ".", "identifier_type", "==", "\"uuid\"", ":", "param_type", "=", "\"string\"", "param_format", "=", "\"uuid\"", "else", ":", "param_type", "=", "\"string\"", "param_format", "=", "None", "kw...

21.857143

0.002088

def zambretti_code(params, hourly_data): """Simple implementation of Zambretti forecaster algorithm. Inspired by beteljuice.com Java algorithm, as converted to Python by honeysucklecottage.me.uk, and further information from http://www.meteormetrics.com/zambretti.htm""" north = literal_eval(params.g...

[ "def", "zambretti_code", "(", "params", ",", "hourly_data", ")", ":", "north", "=", "literal_eval", "(", "params", ".", "get", "(", "'Zambretti'", ",", "'north'", ",", "'True'", ")", ")", "baro_upper", "=", "float", "(", "params", ".", "get", "(", "'Zamb...

40.446429

0.001293

def replySocket(self, port, host='*'): ''' Create a REP-style socket for servers ''' try: socket = self._context.socket(zmq.REP) socket.bind(self.tcpAddress(host, port)) except Exception as e: newMsg= str("%s %s:%d" % (str(e), host, port)) ...

[ "def", "replySocket", "(", "self", ",", "port", ",", "host", "=", "'*'", ")", ":", "try", ":", "socket", "=", "self", ".", "_context", ".", "socket", "(", "zmq", ".", "REP", ")", "socket", ".", "bind", "(", "self", ".", "tcpAddress", "(", "host", ...

33

0.008043

def _module_iterator(root, recursive=True): """Iterate over modules.""" yield root stack = collections.deque((root,)) while stack: package = stack.popleft() # The '__path__' attribute of a package might return a list of paths if # the package is referenced as a namespace. ...

[ "def", "_module_iterator", "(", "root", ",", "recursive", "=", "True", ")", ":", "yield", "root", "stack", "=", "collections", ".", "deque", "(", "(", "root", ",", ")", ")", "while", "stack", ":", "package", "=", "stack", ".", "popleft", "(", ")", "#...

38.692308

0.00097

def replace_pattern(pattern, repl, count=0, flags=8, bufsize=1, append_if_not_found=False, prepend_if_not_found=False, not_found_content=None, search_only=False...

[ "def", "replace_pattern", "(", "pattern", ",", "repl", ",", "count", "=", "0", ",", "flags", "=", "8", ",", "bufsize", "=", "1", ",", "append_if_not_found", "=", "False", ",", "prepend_if_not_found", "=", "False", ",", "not_found_content", "=", "None", ","...

41.156028

0.001178

def read_k2sff_lightcurve(lcfits): '''This reads a K2 SFF (Vandenberg+ 2014) light curve into an `lcdict`. Use this with the light curves from the K2 SFF project at MAST. Parameters ---------- lcfits : str The filename of the FITS light curve file downloaded from MAST. Returns --...

[ "def", "read_k2sff_lightcurve", "(", "lcfits", ")", ":", "# read the fits file", "hdulist", "=", "pyfits", ".", "open", "(", "lcfits", ")", "lchdr", ",", "lcdata", "=", "hdulist", "[", "1", "]", ".", "header", ",", "hdulist", "[", "1", "]", ".", "data", ...

33.315385

0.012108

def _query(self, request, filter=None): """ Build a query based on the filter and the request params, and send the query to the database. """ limit = None offset = None if 'maxfeatures' in request.params: limit = int(request.params['maxfeatures']) if 'limi...

[ "def", "_query", "(", "self", ",", "request", ",", "filter", "=", "None", ")", ":", "limit", "=", "None", "offset", "=", "None", "if", "'maxfeatures'", "in", "request", ".", "params", ":", "limit", "=", "int", "(", "request", ".", "params", "[", "'ma...

42.666667

0.002183

def invalid_characters(self, text): """Give simple list of invalid characters present in text.""" return ''.join(sorted(set([c for c in text if c not in self.alphabet])))

[ "def", "invalid_characters", "(", "self", ",", "text", ")", ":", "return", "''", ".", "join", "(", "sorted", "(", "set", "(", "[", "c", "for", "c", "in", "text", "if", "c", "not", "in", "self", ".", "alphabet", "]", ")", ")", ")" ]

61.333333

0.016129

def usb(self, state): """Sets the monsoon's USB passthrough mode. This is specific to the USB port in front of the monsoon box which connects to the powered device, NOT the USB that is used to talk to the monsoon itself. "Off" means USB always off. "On" means USB always on. ...

[ "def", "usb", "(", "self", ",", "state", ")", ":", "state_lookup", "=", "{", "\"off\"", ":", "0", ",", "\"on\"", ":", "1", ",", "\"auto\"", ":", "2", "}", "state", "=", "state", ".", "lower", "(", ")", "if", "state", "in", "state_lookup", ":", "c...

39.384615

0.001907

def __bind(self): ''' Binds the reply server ''' if self.log_queue is not None: salt.log.setup.set_multiprocessing_logging_queue(self.log_queue) if self.log_queue_level is not None: salt.log.setup.set_multiprocessing_logging_level(self.log_queue_level) ...

[ "def", "__bind", "(", "self", ")", ":", "if", "self", ".", "log_queue", "is", "not", "None", ":", "salt", ".", "log", ".", "setup", ".", "set_multiprocessing_logging_queue", "(", "self", ".", "log_queue", ")", "if", "self", ".", "log_queue_level", "is", ...

48.064516

0.001973

def to_native_units(self, motor): """ Return the native speed measurement required to achieve desired rotations-per-minute """ assert abs(self.rotations_per_minute) <= motor.max_rpm,\ "invalid rotations-per-minute: {} max RPM is {}, {} was requested".format( motor...

[ "def", "to_native_units", "(", "self", ",", "motor", ")", ":", "assert", "abs", "(", "self", ".", "rotations_per_minute", ")", "<=", "motor", ".", "max_rpm", ",", "\"invalid rotations-per-minute: {} max RPM is {}, {} was requested\"", ".", "format", "(", "motor", ",...

53.625

0.009174

def get_char_weights(doc_weighted_spans, preserve_density=None): # type: (DocWeightedSpans, Optional[bool]) -> np.ndarray """ Return character weights for a text document with highlighted features. If preserve_density is True, then color for longer fragments will be less intensive than for shorter fragm...

[ "def", "get_char_weights", "(", "doc_weighted_spans", ",", "preserve_density", "=", "None", ")", ":", "# type: (DocWeightedSpans, Optional[bool]) -> np.ndarray", "if", "preserve_density", "is", "None", ":", "preserve_density", "=", "doc_weighted_spans", ".", "preserve_density...

50.772727

0.000879

def send_buffered_messages(self): """Send messages in out_stream to the Stream Manager""" while not self.out_stream.is_empty() and self._stmgr_client.is_registered: tuple_set = self.out_stream.poll() if isinstance(tuple_set, tuple_pb2.HeronTupleSet): tuple_set.src_task_id = self.my_pplan_hel...

[ "def", "send_buffered_messages", "(", "self", ")", ":", "while", "not", "self", ".", "out_stream", ".", "is_empty", "(", ")", "and", "self", ".", "_stmgr_client", ".", "is_registered", ":", "tuple_set", "=", "self", ".", "out_stream", ".", "poll", "(", ")"...

55.75

0.00883

def add_dependency(self, p_from_todo, p_to_todo): """ Adds a dependency from task 1 to task 2. """ def find_next_id(): """ Find a new unused ID. Unused means that no task has it as an 'id' value or as a 'p' value. """ def id_exists(...

[ "def", "add_dependency", "(", "self", ",", "p_from_todo", ",", "p_to_todo", ")", ":", "def", "find_next_id", "(", ")", ":", "\"\"\"\n Find a new unused ID.\n Unused means that no task has it as an 'id' value or as a 'p'\n value.\n \"\"\"", ...

35.448276

0.000947

def fit(self, X, y, **kwargs): """ Fits the learning curve with the wrapped model to the specified data. Draws training and test score curves and saves the scores to the estimator. Parameters ---------- X : array-like, shape (n_samples, n_features) Tr...

[ "def", "fit", "(", "self", ",", "X", ",", "y", ",", "*", "*", "kwargs", ")", ":", "self", ".", "cv_scores_", "=", "cross_val_score", "(", "self", ".", "estimator", ",", "X", ",", "y", ",", "cv", "=", "self", ".", "cv", ",", "scoring", "=", "sel...

30.275862

0.002208

def iter_configurations(kafka_topology_base_path=None): """Cluster topology iterator. Iterate over all the topologies available in config. """ if not kafka_topology_base_path: config_dirs = get_conf_dirs() else: config_dirs = [kafka_topology_base_path] types = set() for conf...

[ "def", "iter_configurations", "(", "kafka_topology_base_path", "=", "None", ")", ":", "if", "not", "kafka_topology_base_path", ":", "config_dirs", "=", "get_conf_dirs", "(", ")", "else", ":", "config_dirs", "=", "[", "kafka_topology_base_path", "]", "types", "=", ...

32.2

0.001206

def _get_default_value_to_cache(self, xblock): """ Perform special logic to provide a field's default value for caching. """ try: # pylint: disable=protected-access return self.from_json(xblock._field_data.default(xblock, self.name)) except KeyError: ...

[ "def", "_get_default_value_to_cache", "(", "self", ",", "xblock", ")", ":", "try", ":", "# pylint: disable=protected-access", "return", "self", ".", "from_json", "(", "xblock", ".", "_field_data", ".", "default", "(", "xblock", ",", "self", ".", "name", ")", "...

40.5

0.008048

def determine_scale(scale, img, mark): """ Scales an image using a specified ratio, 'F' or 'R'. If `scale` is 'F', the image is scaled to be as big as possible to fit in `img` without falling off the edges. If `scale` is 'R', the watermark resizes to a percentage of minimum size of source image. R...

[ "def", "determine_scale", "(", "scale", ",", "img", ",", "mark", ")", ":", "if", "scale", ":", "try", ":", "scale", "=", "float", "(", "scale", ")", "except", "(", "ValueError", ",", "TypeError", ")", ":", "pass", "if", "isinstance", "(", "scale", ",...

40.95122

0.002327

def list_outbox_faxes(self, **kwargs): # noqa: E501 """Get outbox records # noqa: E501 Get outbox fax records information # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=True >>> thread = api.list_o...

[ "def", "list_outbox_faxes", "(", "self", ",", "*", "*", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async'", ")", ":", "return", "self", ".", "list_outbox_faxes_with_http_i...

40.85

0.002392

def __calculate_nearest_distance(self, index_cluster1, index_cluster2): """! @brief Finds two nearest objects in two specified clusters and returns distance between them. @param[in] (uint) Index of the first cluster. @param[in] (uint) Index of the second cluster. ...

[ "def", "__calculate_nearest_distance", "(", "self", ",", "index_cluster1", ",", "index_cluster2", ")", ":", "candidate_minimum_distance", "=", "float", "(", "'Inf'", ")", "for", "index_object1", "in", "self", ".", "__clusters", "[", "index_cluster1", "]", ":", "fo...

45.789474

0.01464

def tensorrt_bind(symbol, ctx, all_params, type_dict=None, stype_dict=None, group2ctx=None, **kwargs): """Bind current symbol to get an optimized trt executor. Parameters ---------- symbol : Symbol The symbol you wish to bind, and optimize with TensorRT. ctx : Context ...

[ "def", "tensorrt_bind", "(", "symbol", ",", "ctx", ",", "all_params", ",", "type_dict", "=", "None", ",", "stype_dict", "=", "None", ",", "group2ctx", "=", "None", ",", "*", "*", "kwargs", ")", ":", "kwargs", "[", "'shared_buffer'", "]", "=", "all_params...

32.114286

0.001727

async def fetchone(self): """ Fetch next row """ self._check_executed() row = await self._read_next() if row is None: return self._rownumber += 1 return row

[ "async", "def", "fetchone", "(", "self", ")", ":", "self", ".", "_check_executed", "(", ")", "row", "=", "await", "self", ".", "_read_next", "(", ")", "if", "row", "is", "None", ":", "return", "self", ".", "_rownumber", "+=", "1", "return", "row" ]

26.125

0.009259

def _set_scores(self): """ Compute anomaly scores for the time series This algorithm just takes the diff of threshold with current value as anomaly score """ anom_scores = {} for timestamp, value in self.time_series.items(): anom_scores[timestamp] = 0.0 ...

[ "def", "_set_scores", "(", "self", ")", ":", "anom_scores", "=", "{", "}", "for", "timestamp", ",", "value", "in", "self", ".", "time_series", ".", "items", "(", ")", ":", "anom_scores", "[", "timestamp", "]", "=", "0.0", "if", "self", ".", "absolute_t...

57.230769

0.009259

def retrieve_file_from_RCSB(http_connection, resource, silent = True): '''Retrieve a file from the RCSB.''' if not silent: colortext.printf("Retrieving %s from RCSB" % os.path.split(resource)[1], color = "aqua") return http_connection.get(resource)

[ "def", "retrieve_file_from_RCSB", "(", "http_connection", ",", "resource", ",", "silent", "=", "True", ")", ":", "if", "not", "silent", ":", "colortext", ".", "printf", "(", "\"Retrieving %s from RCSB\"", "%", "os", ".", "path", ".", "split", "(", "resource", ...

52.8

0.022388

def is_nash(self, action_profile, tol=None): """ Return True if `action_profile` is a Nash equilibrium. Parameters ---------- action_profile : array_like(int or array_like(float)) An array of N objects, where each object must be an integer (pure action) o...

[ "def", "is_nash", "(", "self", ",", "action_profile", ",", "tol", "=", "None", ")", ":", "if", "self", ".", "N", "==", "2", ":", "for", "i", ",", "player", "in", "enumerate", "(", "self", ".", "players", ")", ":", "own_action", ",", "opponent_action"...

35.755556

0.00121

def find_file(path, filename, max_depth=5): """Returns full filepath if the file is in path or a subdirectory.""" for root, dirs, files in os.walk(path): if filename in files: return os.path.join(root, filename) # Don't search past max_depth depth = root[len(path) + 1:].count(os.sep) if depth...

[ "def", "find_file", "(", "path", ",", "filename", ",", "max_depth", "=", "5", ")", ":", "for", "root", ",", "dirs", ",", "files", "in", "os", ".", "walk", "(", "path", ")", ":", "if", "filename", "in", "files", ":", "return", "os", ".", "path", "...

33.545455

0.015831

def connect( self, login, password, authz_id=b"", starttls=False, authmech=None): """Establish a connection with the server. This function must be used. It read the server capabilities and wraps calls to STARTTLS and AUTHENTICATE commands. :param login: username...

[ "def", "connect", "(", "self", ",", "login", ",", "password", ",", "authz_id", "=", "b\"\"", ",", "starttls", "=", "False", ",", "authmech", "=", "None", ")", ":", "try", ":", "self", ".", "sock", "=", "socket", ".", "create_connection", "(", "(", "s...

38.074074

0.001898

def get_ca_signed_key(ca_name, CN='localhost', as_text=False, cacert_path=None, key_filename=None): ''' Get the certificate path or content ca_name name of the CA CN common name of the certificate ...

[ "def", "get_ca_signed_key", "(", "ca_name", ",", "CN", "=", "'localhost'", ",", "as_text", "=", "False", ",", "cacert_path", "=", "None", ",", "key_filename", "=", "None", ")", ":", "set_ca_path", "(", "cacert_path", ")", "if", "not", "key_filename", ":", ...

26.404255

0.000777

def set_default_command(self, command): """Sets a command function as the default command.""" cmd_name = command.name self.add_command(command) self.default_cmd_name = cmd_name

[ "def", "set_default_command", "(", "self", ",", "command", ")", ":", "cmd_name", "=", "command", ".", "name", "self", ".", "add_command", "(", "command", ")", "self", ".", "default_cmd_name", "=", "cmd_name" ]

40.8

0.009615

def collapse_segments (path): """Remove all redundant segments from the given URL path. Precondition: path is an unquoted url path""" # replace backslashes # note: this is _against_ the specification (which would require # backslashes to be left alone, and finally quoted with '%5C') # But replac...

[ "def", "collapse_segments", "(", "path", ")", ":", "# replace backslashes", "# note: this is _against_ the specification (which would require", "# backslashes to be left alone, and finally quoted with '%5C')", "# But replacing has several positive effects:", "# - Prevents path attacks on Windows...

43.870968

0.001439

def set_profiling_level(self, level, slow_ms=None, session=None): """Set the database's profiling level. :Parameters: - `level`: Specifies a profiling level, see list of possible values below. - `slow_ms`: Optionally modify the threshold for the profile to co...

[ "def", "set_profiling_level", "(", "self", ",", "level", ",", "slow_ms", "=", "None", ",", "session", "=", "None", ")", ":", "if", "not", "isinstance", "(", "level", ",", "int", ")", "or", "level", "<", "0", "or", "level", ">", "2", ":", "raise", "...

45.255814

0.001006

def plot_spectrum(self, filename=None, plot_db=True): """ Do a (slow) numpy FFT and take power of data """ header, data = self.read_next_data_block() print("Computing FFT...") d_xx_fft = np.abs(np.fft.fft(data[..., 0])) d_xx_fft = d_xx_fft.flatten() # Rebin to max numbe...

[ "def", "plot_spectrum", "(", "self", ",", "filename", "=", "None", ",", "plot_db", "=", "True", ")", ":", "header", ",", "data", "=", "self", ".", "read_next_data_block", "(", ")", "print", "(", "\"Computing FFT...\"", ")", "d_xx_fft", "=", "np", ".", "a...

30.777778

0.002334

def select(cls, *args, **kwargs): """Support read slaves.""" query = super(Model, cls).select(*args, **kwargs) query.database = cls._get_read_database() return query

[ "def", "select", "(", "cls", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "query", "=", "super", "(", "Model", ",", "cls", ")", ".", "select", "(", "*", "args", ",", "*", "*", "kwargs", ")", "query", ".", "database", "=", "cls", ".", ...

38.6

0.010152

def _iter_ns_range(self): """Iterates over self._ns_range, delegating to self._iter_key_range().""" while True: if self._current_key_range is None: query = self._ns_range.make_datastore_query() namespace_result = query.Get(1) if not namespace_result: break namesp...

[ "def", "_iter_ns_range", "(", "self", ")", ":", "while", "True", ":", "if", "self", ".", "_current_key_range", "is", "None", ":", "query", "=", "self", ".", "_ns_range", ".", "make_datastore_query", "(", ")", "namespace_result", "=", "query", ".", "Get", "...

37.740741

0.008612

def _print(self, *args): """ internal print to self.fobj """ string = u" ".join(args) + '\n' self.fobj.write(string)

[ "def", "_print", "(", "self", ",", "*", "args", ")", ":", "string", "=", "u\" \"", ".", "join", "(", "args", ")", "+", "'\\n'", "self", ".", "fobj", ".", "write", "(", "string", ")" ]

34.25

0.014286

def run(self): """Runs the build extension.""" compiler = new_compiler(compiler=self.compiler) if compiler.compiler_type == "msvc": self.define = [ ("UNICODE", ""), ] else: command = "sh configure --disable-shared-libs" output = self._RunCommand(command) print_l...

[ "def", "run", "(", "self", ")", ":", "compiler", "=", "new_compiler", "(", "compiler", "=", "self", ".", "compiler", ")", "if", "compiler", ".", "compiler_type", "==", "\"msvc\"", ":", "self", ".", "define", "=", "[", "(", "\"UNICODE\"", ",", "\"\"", "...

22.888889

0.013975

def field_specific_errors(self): """Returns a dictionary of field-specific validation errors for this row.""" return { key: value for key, value in self.error_dict.items() if key != NON_FIELD_ERRORS }

[ "def", "field_specific_errors", "(", "self", ")", ":", "return", "{", "key", ":", "value", "for", "key", ",", "value", "in", "self", ".", "error_dict", ".", "items", "(", ")", "if", "key", "!=", "NON_FIELD_ERRORS", "}" ]

40.5

0.012097

def randtuple(self): """ -> a #tuple of random #int """ return tuple( self.randint for x in range(0, self.random.randint(3, 10)))

[ "def", "randtuple", "(", "self", ")", ":", "return", "tuple", "(", "self", ".", "randint", "for", "x", "in", "range", "(", "0", ",", "self", ".", "random", ".", "randint", "(", "3", ",", "10", ")", ")", ")" ]

33

0.011834

def start_engines(opts, proc_mgr, proxy=None): ''' Fire up the configured engines! ''' utils = salt.loader.utils(opts, proxy=proxy) if opts['__role'] == 'master': runners = salt.loader.runner(opts, utils=utils) else: runners = [] funcs = salt.loader.minion_mods(opts, utils=ut...

[ "def", "start_engines", "(", "opts", ",", "proc_mgr", ",", "proxy", "=", "None", ")", ":", "utils", "=", "salt", ".", "loader", ".", "utils", "(", "opts", ",", "proxy", "=", "proxy", ")", "if", "opts", "[", "'__role'", "]", "==", "'master'", ":", "...

36.482759

0.00046

def submit(self, fn, *args, **kwargs): """Submit an operation""" corofn = asyncio.coroutine(lambda: fn(*args, **kwargs)) return run_coroutine_threadsafe(corofn(), self.loop)

[ "def", "submit", "(", "self", ",", "fn", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "corofn", "=", "asyncio", ".", "coroutine", "(", "lambda", ":", "fn", "(", "*", "args", ",", "*", "*", "kwargs", ")", ")", "return", "run_coroutine_thread...

48.5

0.010152

def get_formatted_content(self, pyobj): '''typecode data --> text ''' u = urlencode(pyobj, self.reserved) return String.get_formatted_content(self, u)

[ "def", "get_formatted_content", "(", "self", ",", "pyobj", ")", ":", "u", "=", "urlencode", "(", "pyobj", ",", "self", ".", "reserved", ")", "return", "String", ".", "get_formatted_content", "(", "self", ",", "u", ")" ]

31.666667

0.020513

def rename(self, new_relation): """Rename this cached relation to new_relation. Note that this will change the output of key(), all refs must be updated! :param _CachedRelation new_relation: The new name to apply to the relation """ # Relations store this stu...

[ "def", "rename", "(", "self", ",", "new_relation", ")", ":", "# Relations store this stuff inside their `path` dict. But they", "# also store a table_name, and usually use it in their .render(),", "# so we need to update that as well. It doesn't appear that", "# table_name is ever anything bu...

43.3

0.00226

def delete(self): """Get rid of this, starting now. Apart from deleting the node, this also informs all its users that it doesn't exist and therefore can't be their avatar anymore. """ if self.name in self.character.portal: del self.character.portal[self.nam...

[ "def", "delete", "(", "self", ")", ":", "if", "self", ".", "name", "in", "self", ".", "character", ".", "portal", ":", "del", "self", ".", "character", ".", "portal", "[", "self", ".", "name", "]", "if", "self", ".", "name", "in", "self", ".", "c...

37.5

0.002

def schedule_in(self, job, timedelta): """ Schedule job to run at datetime.timedelta from now.""" now = long(self._now() * 1e6) when = now + timedelta.total_seconds() * 1e6 self.schedule(job, when)

[ "def", "schedule_in", "(", "self", ",", "job", ",", "timedelta", ")", ":", "now", "=", "long", "(", "self", ".", "_now", "(", ")", "*", "1e6", ")", "when", "=", "now", "+", "timedelta", ".", "total_seconds", "(", ")", "*", "1e6", "self", ".", "sc...

45

0.008734

async def _rank_text(self, choices): """ Try to match the TextLayer with choice's intents. """ tl = self.request.get_layer(l.RawText) best = 0.0 for slug, params in choices.items(): strings = [] if params['intent']: intent = geta...

[ "async", "def", "_rank_text", "(", "self", ",", "choices", ")", ":", "tl", "=", "self", ".", "request", ".", "get_layer", "(", "l", ".", "RawText", ")", "best", "=", "0.0", "for", "slug", ",", "params", "in", "choices", ".", "items", "(", ")", ":",...

29.714286

0.002328

def update_validators(): """ Call this to updade the global nrml.validators """ validators.update({ 'fragilityFunction.id': valid.utf8, # taxonomy 'vulnerabilityFunction.id': valid.utf8, # taxonomy 'consequenceFunction.id': valid.utf8, # taxonomy 'asset.id': valid.asse...

[ "def", "update_validators", "(", ")", ":", "validators", ".", "update", "(", "{", "'fragilityFunction.id'", ":", "valid", ".", "utf8", ",", "# taxonomy", "'vulnerabilityFunction.id'", ":", "valid", ".", "utf8", ",", "# taxonomy", "'consequenceFunction.id'", ":", "...

41.203704

0.000439

def _split_fit_score_trial(self, X, y, idx=0): """ Splits the dataset, fits a clone of the estimator, then scores it according to the required metrics. The index of the split is added to the random_state if the random_state is not None; this ensures that every split is shuffled ...

[ "def", "_split_fit_score_trial", "(", "self", ",", "X", ",", "y", ",", "idx", "=", "0", ")", ":", "random_state", "=", "self", ".", "random_state", "if", "random_state", "is", "not", "None", ":", "random_state", "+=", "idx", "splitter", "=", "self", ".",...

39.25

0.001657

def response(credentials, password, request): """Compile digest auth response If the qop directive's value is "auth" or "auth-int" , then compute the response as follows: RESPONSE = MD5(HA1:nonce:nonceCount:clienNonce:qop:HA2) Else if the qop directive is unspecified, then compute the response as fo...

[ "def", "response", "(", "credentials", ",", "password", ",", "request", ")", ":", "response", "=", "None", "algorithm", "=", "credentials", ".", "get", "(", "'algorithm'", ")", "HA1_value", "=", "HA1", "(", "credentials", ".", "get", "(", "'realm'", ")", ...

39.738095

0.002339

def iter_extensions(prefix, event_id): """Return extension (prefix + event_id) with an optional suffix which is incremented step by step in case of collision """ extension = '{prefix}{event_id}'.format(prefix=prefix, event_id=event_id) yield extension suffix = 1 while True: yield ...

[ "def", "iter_extensions", "(", "prefix", ",", "event_id", ")", ":", "extension", "=", "'{prefix}{event_id}'", ".", "format", "(", "prefix", "=", "prefix", ",", "event_id", "=", "event_id", ")", "yield", "extension", "suffix", "=", "1", "while", "True", ":", ...

39.5

0.002475

def _get_file(self, path, prepend=False): '''Extracts a file from dap to a file-like object''' if prepend: path = os.path.join(self._dirname(), path) extracted = self._tar.extractfile(path) if extracted: return extracted raise DapFileError(('Could not read...

[ "def", "_get_file", "(", "self", ",", "path", ",", "prepend", "=", "False", ")", ":", "if", "prepend", ":", "path", "=", "os", ".", "path", ".", "join", "(", "self", ".", "_dirname", "(", ")", ",", "path", ")", "extracted", "=", "self", ".", "_ta...

47.777778

0.009132

def _dens(self,R,z,phi=0.,t=0.): """ NAME: _dens PURPOSE: evaluate the density for this potential INPUT: R - Galactocentric cylindrical radius z - vertical height phi - azimuth t - time OUTPUT: the densi...

[ "def", "_dens", "(", "self", ",", "R", ",", "z", ",", "phi", "=", "0.", ",", "t", "=", "0.", ")", ":", "r", "=", "nu", ".", "sqrt", "(", "R", "**", "2.", "+", "z", "**", "2.", ")", "return", "1.", "/", "r", "**", "self", ".", "alpha", "...

26

0.014433

def gru(num_hidden, indata, prev_state, param, seqidx, layeridx, dropout=0., is_batchnorm=False, gamma=None, beta=None, name=None): """ GRU Cell symbol Reference: * Chung, Junyoung, et al. "Empirical evaluation of gated recurrent neural networks on sequence modeling." arXiv preprint arXiv:1412.3...

[ "def", "gru", "(", "num_hidden", ",", "indata", ",", "prev_state", ",", "param", ",", "seqidx", ",", "layeridx", ",", "dropout", "=", "0.", ",", "is_batchnorm", "=", "False", ",", "gamma", "=", "None", ",", "beta", "=", "None", ",", "name", "=", "Non...

54.130435

0.002367

def posterior(self, x, Sigma=None): """Posterior for model: X1, ..., Xn ~ N(theta, Sigma). Parameters ---------- x: (n, d) ndarray data Sigma: (d, d) ndarray (fixed) covariance matrix in the model """ n = x.shape[0] Sigma...

[ "def", "posterior", "(", "self", ",", "x", ",", "Sigma", "=", "None", ")", ":", "n", "=", "x", ".", "shape", "[", "0", "]", "Sigma", "=", "np", ".", "eye", "(", "self", ".", "dim", ")", "if", "Sigma", "is", "None", "else", "Sigma", "Siginv", ...

33.555556

0.009662

def user_present(name, password, email, tenant=None, enabled=True, roles=None, profile=None, password_reset=True, project=None, **connection_args): ''' Ensure ...

[ "def", "user_present", "(", "name", ",", "password", ",", "email", ",", "tenant", "=", "None", ",", "enabled", "=", "True", ",", "roles", "=", "None", ",", "profile", "=", "None", ",", "password_reset", "=", "True", ",", "project", "=", "None", ",", ...

40.691542

0.001193

def retry(*dargs, **dkwargs): """ The retry decorator. Can be passed all the arguments that are accepted by Retry.__init__. """ # support both @retry and @retry() as valid syntax if len(dargs) == 1 and callable(dargs[0]): def wrap_simple(f): @_wraps(f) def wrappe...

[ "def", "retry", "(", "*", "dargs", ",", "*", "*", "dkwargs", ")", ":", "# support both @retry and @retry() as valid syntax", "if", "len", "(", "dargs", ")", "==", "1", "and", "callable", "(", "dargs", "[", "0", "]", ")", ":", "def", "wrap_simple", "(", "...

23.592593

0.001508

def deployment_delete(name, resource_group, **kwargs): ''' .. versionadded:: 2019.2.0 Delete a deployment. :param name: The name of the deployment to delete. :param resource_group: The resource group name assigned to the deployment. CLI Example: .. code-block:: bash sal...

[ "def", "deployment_delete", "(", "name", ",", "resource_group", ",", "*", "*", "kwargs", ")", ":", "result", "=", "False", "resconn", "=", "__utils__", "[", "'azurearm.get_client'", "]", "(", "'resource'", ",", "*", "*", "kwargs", ")", "try", ":", "deploy"...

24.709677

0.001256

def bind_to(self, table, name): """ Bind this column to a table, and assign it a name. This method can only be called once per instance, because a Column cannot be bound to multiple tables. (The sort order would be ambiguous.) """ if self.bound_to is not None: ...

[ "def", "bind_to", "(", "self", ",", "table", ",", "name", ")", ":", "if", "self", ".", "bound_to", "is", "not", "None", ":", "raise", "AttributeError", "(", "\"Column is already bound to '%s' as '%s'\"", "%", "self", ".", "bound_to", ")", "self", ".", "bound...

38.833333

0.008386

def get_driver_script_catalog(name): # noqa: E501 """Retrieve the script catalog Retrieve the script catalog # noqa: E501 :param name: Get status of a driver with this name :type name: str :rtype: Response """ response = errorIfUnauthorized(role='user') if response: return r...

[ "def", "get_driver_script_catalog", "(", "name", ")", ":", "# noqa: E501", "response", "=", "errorIfUnauthorized", "(", "role", "=", "'user'", ")", "if", "response", ":", "return", "response", "else", ":", "response", "=", "ApitaxResponse", "(", ")", "driver", ...

24.181818

0.001808

def percent_pareto_durations(records, percentage=0.8): """ The percentage of user's contacts that account for 80% of its total time spend on the phone. Optionally takes a percentage argument as a decimal (e.g., .8 for 80%). """ if len(records) == 0: return None user_count = defaultd...

[ "def", "percent_pareto_durations", "(", "records", ",", "percentage", "=", "0.8", ")", ":", "if", "len", "(", "records", ")", "==", "0", ":", "return", "None", "user_count", "=", "defaultdict", "(", "int", ")", "for", "r", "in", "records", ":", "if", "...

33.909091

0.001304

def lines_to_path(lines): """ Turn line segments into a Path2D or Path3D object. Parameters ------------ lines : (n, 2, dimension) or (n, dimension) float Line segments or connected polyline curve in 2D or 3D Returns ----------- kwargs : dict kwargs for Path constructor ...

[ "def", "lines_to_path", "(", "lines", ")", ":", "lines", "=", "np", ".", "asanyarray", "(", "lines", ",", "dtype", "=", "np", ".", "float64", ")", "if", "util", ".", "is_shape", "(", "lines", ",", "(", "-", "1", ",", "(", "2", ",", "3", ")", ")...

35.783784

0.000735

def get_project(self, project_id): """ http://confluence.jetbrains.net/display/YTD2/GET+project """ return youtrack.Project(self._get("/admin/project/" + urlquote(project_id)), self)

[ "def", "get_project", "(", "self", ",", "project_id", ")", ":", "return", "youtrack", ".", "Project", "(", "self", ".", "_get", "(", "\"/admin/project/\"", "+", "urlquote", "(", "project_id", ")", ")", ",", "self", ")" ]

50.75

0.014563

def list_download_tasks(self, need_task_info="1", asc="0", start=0, create_time=None, limit=1000, status="255", source_url=None, remote_path=None, **kwargs): """查询离线下载任务ID列表及任务信息. :param need_task_info: 是否需要返回任务信息: * 0：不需要 ...

[ "def", "list_download_tasks", "(", "self", ",", "need_task_info", "=", "\"1\"", ",", "asc", "=", "\"0\"", ",", "start", "=", "0", ",", "create_time", "=", "None", ",", "limit", "=", "1000", ",", "status", "=", "\"255\"", ",", "source_url", "=", "None", ...

27.536082

0.001807

def simpleAttrs(self): """provide a copy of this player's attributes as a dictionary, but with objects flattened into a string representation of the object""" simpleAttrs = {} for k,v in iteritems(self.attrs): if k in ["_matches"]: continue # attributes to specifically ignore ...

[ "def", "simpleAttrs", "(", "self", ")", ":", "simpleAttrs", "=", "{", "}", "for", "k", ",", "v", "in", "iteritems", "(", "self", ".", "attrs", ")", ":", "if", "k", "in", "[", "\"_matches\"", "]", ":", "continue", "# attributes to specifically ignore", "t...

51.875

0.021327

def job_listener(event): '''Listens to completed job''' job_id = event.job.args[0] if event.code == events.EVENT_JOB_MISSED: db.mark_job_as_missed(job_id) elif event.exception: if isinstance(event.exception, util.JobError): error_object = event.exception.as_dict() el...

[ "def", "job_listener", "(", "event", ")", ":", "job_id", "=", "event", ".", "job", ".", "args", "[", "0", "]", "if", "event", ".", "code", "==", "events", ".", "EVENT_JOB_MISSED", ":", "db", ".", "mark_job_as_missed", "(", "job_id", ")", "elif", "event...

34.68

0.002245

def endure(self, key, persist_to=-1, replicate_to=-1, cas=0, check_removed=False, timeout=5.0, interval=0.010): """Wait until a key has been distributed to one or more nodes By default, when items are stored to Couchbase, the operation is considered successful if the vBucket mast...

[ "def", "endure", "(", "self", ",", "key", ",", "persist_to", "=", "-", "1", ",", "replicate_to", "=", "-", "1", ",", "cas", "=", "0", ",", "check_removed", "=", "False", ",", "timeout", "=", "5.0", ",", "interval", "=", "0.010", ")", ":", "# We rea...

50.301205

0.000705

def oom_components(Ct, C2t, rank_ind=None, lcc=None, tol_one=1e-2): """ Compute OOM components and eigenvalues from count matrices: Parameters ---------- Ct : ndarray(N, N) count matrix from data C2t : sparse csc-matrix (N*N, N) two-step count matrix from data for all states, co...

[ "def", "oom_components", "(", "Ct", ",", "C2t", ",", "rank_ind", "=", "None", ",", "lcc", "=", "None", ",", "tol_one", "=", "1e-2", ")", ":", "import", "msmtools", ".", "estimation", "as", "me", "# Decompose count matrix by SVD:", "if", "lcc", "is", "not",...

31.025

0.001171

def assertFileSizeNotAlmostEqual( self, filename, size, places=None, msg=None, delta=None): '''Fail unless ``filename`` does not have the given ``size`` as determined by their difference rounded to the given number ofdecimal ``places`` (default 7) and comparing to zero, or if ...

[ "def", "assertFileSizeNotAlmostEqual", "(", "self", ",", "filename", ",", "size", ",", "places", "=", "None", ",", "msg", "=", "None", ",", "delta", "=", "None", ")", ":", "fsize", "=", "self", ".", "_get_file_size", "(", "filename", ")", "self", ".", ...

35.961538

0.002083

def makeLeu(segID, N, CA, C, O, geo): '''Creates a Leucine residue''' ##R-Group CA_CB_length=geo.CA_CB_length C_CA_CB_angle=geo.C_CA_CB_angle N_C_CA_CB_diangle=geo.N_C_CA_CB_diangle CB_CG_length=geo.CB_CG_length CA_CB_CG_angle= geo.CA_CB_CG_angle N_CA_CB_CG_diangle=geo.N_CA_CB_CG_diangl...

[ "def", "makeLeu", "(", "segID", ",", "N", ",", "CA", ",", "C", ",", "O", ",", "geo", ")", ":", "##R-Group", "CA_CB_length", "=", "geo", ".", "CA_CB_length", "C_CA_CB_angle", "=", "geo", ".", "C_CA_CB_angle", "N_C_CA_CB_diangle", "=", "geo", ".", "N_C_CA_...

36.153846

0.02279

def insertRnaQuantificationSet(self, rnaQuantificationSet): """ Inserts a the specified rnaQuantificationSet into this repository. """ try: models.Rnaquantificationset.create( id=rnaQuantificationSet.getId(), datasetid=rnaQuantificationSet.getP...

[ "def", "insertRnaQuantificationSet", "(", "self", ",", "rnaQuantificationSet", ")", ":", "try", ":", "models", ".", "Rnaquantificationset", ".", "create", "(", "id", "=", "rnaQuantificationSet", ".", "getId", "(", ")", ",", "datasetid", "=", "rnaQuantificationSet"...

50.1875

0.002445

def result(self, timeout=None): """Gets the result of the task. Arguments: timeout: Maximum seconds to wait for a result before raising a TimeoutError. If set to None, this will wait forever. If the queue doesn't store results and timeout is None, this call w...

[ "def", "result", "(", "self", ",", "timeout", "=", "None", ")", ":", "start", "=", "time", ".", "time", "(", ")", "while", "True", ":", "task", "=", "self", ".", "get_task", "(", ")", "if", "not", "task", "or", "task", ".", "status", "not", "in",...

33.375

0.002427

def _generate_notebooks(table, timestamp_column, engine, crypto_factory, min_dt, max_dt, logger): """ See docstrings for `generate_files` and `generate_checkpoints`. Parameters ---------- table : SQLAlchemy.Table Table to fetch notebooks from, `files` or `remote_chec...

[ "def", "_generate_notebooks", "(", "table", ",", "timestamp_column", ",", "engine", ",", "crypto_factory", ",", "min_dt", ",", "max_dt", ",", "logger", ")", ":", "where_conds", "=", "[", "]", "if", "min_dt", "is", "not", "None", ":", "where_conds", ".", "a...

40.641791

0.000359

def asHdl(cls, obj, ctx: HwtSerializerCtx): """ Convert object to HDL string :param obj: object to serialize :param ctx: HwtSerializerCtx instance """ if isinstance(obj, RtlSignalBase): return cls.SignalItem(obj, ctx) elif isinstance(obj, Value): ...

[ "def", "asHdl", "(", "cls", ",", "obj", ",", "ctx", ":", "HwtSerializerCtx", ")", ":", "if", "isinstance", "(", "obj", ",", "RtlSignalBase", ")", ":", "return", "cls", ".", "SignalItem", "(", "obj", ",", "ctx", ")", "elif", "isinstance", "(", "obj", ...

29.25

0.002364

def forward_word_end_extend_selection(self, e): # u"""Move forward to the end of the next word. Words are composed of letters and digits.""" self.l_buffer.forward_word_end_extend_selection(self.argument_reset) self.finalize()

[ "def", "forward_word_end_extend_selection", "(", "self", ",", "e", ")", ":", "# \r", "self", ".", "l_buffer", ".", "forward_word_end_extend_selection", "(", "self", ".", "argument_reset", ")", "self", ".", "finalize", "(", ")" ]

51.6

0.015267

def prepare(_next, self): """Hook after prepare and set 'portrait' as image widget to ``self.form``. """ _next(self) if not self.portrait_support: return model = self.model request = self.request if request.has_permission('edit_user', model.par...

[ "def", "prepare", "(", "_next", ",", "self", ")", ":", "_next", "(", "self", ")", "if", "not", "self", ".", "portrait_support", ":", "return", "model", "=", "self", ".", "model", "request", "=", "self", ".", "request", "if", "request", ".", "has_permis...

37.5625

0.001081

def get_all_invitations(self, **kwargs): # noqa: E501 """Get the details of all the user invitations. # noqa: E501 An endpoint for retrieving the details of all the active user invitations sent for new or existing users to join the account. **Example usage:** `curl https://api.us-east-1.mbedcloud.c...

[ "def", "get_all_invitations", "(", "self", ",", "*", "*", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'asynchronous'", ")", ":", "return", "self", ".", "get_all_invitations_...

58.521739

0.001462

def do_mailfy(self, query, **kwargs): """ Verifying a mailfy query in this platform. This might be redefined in any class inheriting from Platform. The only condition is that any of this should return an equivalent array. Args: ----- query: The element to be...

[ "def", "do_mailfy", "(", "self", ",", "query", ",", "*", "*", "kwargs", ")", ":", "if", "self", ".", "check_mailfy", "(", "query", ",", "kwargs", ")", ":", "expandedEntities", "=", "general", ".", "expandEntitiesFromEmail", "(", "query", ")", "r", "=", ...

31.672414

0.001584

def bounce_local(drain=False): ''' Bounce Traffic Server on the local node. Bouncing Traffic Server shuts down and immediately restarts the Traffic Server node. drain This option modifies the restart behavior such that traffic_server is not shut down until the number of active client co...

[ "def", "bounce_local", "(", "drain", "=", "False", ")", ":", "if", "_TRAFFICCTL", ":", "cmd", "=", "_traffic_ctl", "(", "'server'", ",", "'restart'", ")", "else", ":", "cmd", "=", "_traffic_line", "(", "'-b'", ")", "if", "drain", ":", "cmd", "=", "cmd"...

28.923077

0.001287

async def reportCompleted(self, *args, **kwargs): """ Report Run Completed Report a task completed, resolving the run as `completed`. This method gives output: ``v1/task-status-response.json#`` This method is ``stable`` """ return await self._makeApiCall(self....

[ "async", "def", "reportCompleted", "(", "self", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "return", "await", "self", ".", "_makeApiCall", "(", "self", ".", "funcinfo", "[", "\"reportCompleted\"", "]", ",", "*", "args", ",", "*", "*", "kwargs...

29.5

0.008219

def download(self, storagemodel:object, modeldefinition = None): """ load blob from storage into StorageBlobModelInstance """ if (storagemodel.name is None): # No content to download raise AzureStorageWrapException(storagemodel, "StorageBlobModel does not contain content nor con...

[ "def", "download", "(", "self", ",", "storagemodel", ":", "object", ",", "modeldefinition", "=", "None", ")", ":", "if", "(", "storagemodel", ".", "name", "is", "None", ")", ":", "# No content to download", "raise", "AzureStorageWrapException", "(", "storagemode...

45.32

0.009507