kejian/codesearchnet-python-rebalanced · Datasets at Hugging Face

text stringlengths 75 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 0.18
def copy_func(dest, src, symlinks=True): """ If symlinks (is true), then a symbolic link will be shallow copied and recreated as a symbolic link; otherwise, copying a symbolic link will be equivalent to copying the symbolic link's final target regardless of symbolic link depth. """ dest = s...	[ "def", "copy_func", "(", "dest", ",", "src", ",", "symlinks", "=", "True", ")", ":", "dest", "=", "str", "(", "dest", ")", "src", "=", "str", "(", "src", ")", "SCons", ".", "Node", ".", "FS", ".", "invalidate_node_memos", "(", "dest", ")", "if", ...	33.965517	0.000987
def load_qt(api_options): """ Attempt to import Qt, given a preference list of permissible bindings It is safe to call this function multiple times. Parameters ---------- api_options: List of strings The order of APIs to try. Valid items are 'pyside', 'pyqt', and 'pyqtv1' ...	[ "def", "load_qt", "(", "api_options", ")", ":", "loaders", "=", "{", "QT_API_PYSIDE", ":", "import_pyside", ",", "QT_API_PYQT", ":", "import_pyqt4", ",", "QT_API_PYQTv1", ":", "partial", "(", "import_pyqt4", ",", "version", "=", "1", ")", ",", "QT_API_PYQT_DEF...	31.2	0.000956
def attendee_list(request): ''' Returns a list of all attendees. ''' attendees = people.Attendee.objects.select_related( "attendeeprofilebase", "user", ) profiles = AttendeeProfile.objects.filter( attendee__in=attendees ).select_related( "attendee", "attendee__user"...	[ "def", "attendee_list", "(", "request", ")", ":", "attendees", "=", "people", ".", "Attendee", ".", "objects", ".", "select_related", "(", "\"attendeeprofilebase\"", ",", "\"user\"", ",", ")", "profiles", "=", "AttendeeProfile", ".", "objects", ".", "filter", ...	25.55	0.000943
def cublasDtrsm(handle, side, uplo, trans, diag, m, n, alpha, A, lda, B, ldb): """ Solve a real triangular system with multiple right-hand sides. """ status = _libcublas.cublasDtrsm_v2(handle, _CUBLAS_SIDE_MODE[side], ...	[ "def", "cublasDtrsm", "(", "handle", ",", "side", ",", "uplo", ",", "trans", ",", "diag", ",", "m", ",", "n", ",", "alpha", ",", "A", ",", "lda", ",", "B", ",", "ldb", ")", ":", "status", "=", "_libcublas", ".", "cublasDtrsm_v2", "(", "handle", "...	44.928571	0.012461
def geckoboard_pie_chart(request): """ Shows a pie chart of the metrics in the uids[] GET variable array. """ params = get_gecko_params(request, cumulative=True) from_date = datetime.now()-timedelta(days=params['days_back']) metrics = Metric.objects.filter(uid__in=params['uids']) results =...	[ "def", "geckoboard_pie_chart", "(", "request", ")", ":", "params", "=", "get_gecko_params", "(", "request", ",", "cumulative", "=", "True", ")", "from_date", "=", "datetime", ".", "now", "(", ")", "-", "timedelta", "(", "days", "=", "params", "[", "'days_b...	40.153846	0.009363
def serializeG1(x, compress=True): """ Converts G1 element @x into an array of bytes. If @compress is True, the point will be compressed resulting in a much shorter string of bytes. """ assertType(x, G1Element) return _serialize(x, compress, librelic.g1_size_bin_abi, librelic.g1_write_b...	[ "def", "serializeG1", "(", "x", ",", "compress", "=", "True", ")", ":", "assertType", "(", "x", ",", "G1Element", ")", "return", "_serialize", "(", "x", ",", "compress", ",", "librelic", ".", "g1_size_bin_abi", ",", "librelic", ".", "g1_write_bin_abi", ")"...	40	0.009174
def get_flagged_args(): """get_flagged_args Collects from the execution statement the arguments provided to this script. The items are then interpretted and returned. The object expected are the KvP's: --os_type - the operating system type to be built --os_version - the operating system version to be buil...	[ "def", "get_flagged_args", "(", ")", ":", "expected", "=", "[", "'os_type'", ",", "'os_version'", "]", "arguments", "=", "{", "}", "try", ":", "opts", ",", "adds", "=", "getopt", ".", "getopt", "(", "sys", ".", "argv", ",", "''", ",", "map", "(", "...	39.5	0.000618
def fit_glx(self, reject_outliers=3.0, fit_lb=3.6, fit_ub=3.9, fit_func=None): """ Fit a Gaussian function to the Glu/Gln (GLX) peak at 3.75ppm, +/- 0.15ppm [Hurd2004]_. Compare this model to a model that treats the Glx signal as two gaussian peaks. Glx signal a...	[ "def", "fit_glx", "(", "self", ",", "reject_outliers", "=", "3.0", ",", "fit_lb", "=", "3.6", ",", "fit_ub", "=", "3.9", ",", "fit_func", "=", "None", ")", ":", "# Use everything:", "fit_spectra", "=", "self", ".", "diff_spectra", ".", "copy", "(", ")", ...	39.416667	0.002063
def hash(self, id): """ Creates a unique filename in the cache for the id. """ h = md5(id).hexdigest() return os.path.join(self.path, h+self.type)	[ "def", "hash", "(", "self", ",", "id", ")", ":", "h", "=", "md5", "(", "id", ")", ".", "hexdigest", "(", ")", "return", "os", ".", "path", ".", "join", "(", "self", ".", "path", ",", "h", "+", "self", ".", "type", ")" ]	24.857143	0.011111
def _check_out_arg(func): """Check if ``func`` has an (optional) ``out`` argument. Also verify that the signature of ``func`` has no ``*args`` since they make argument propagation a hassle. Parameters ---------- func : callable Object that should be inspected. Returns ------- ...	[ "def", "_check_out_arg", "(", "func", ")", ":", "if", "sys", ".", "version_info", ".", "major", ">", "2", ":", "spec", "=", "inspect", ".", "getfullargspec", "(", "func", ")", "kw_only", "=", "spec", ".", "kwonlyargs", "else", ":", "spec", "=", "inspec...	27.183673	0.000725
def build(self, ignore=None): '''Calls all necessary methods to build the Lambda Package''' self._prepare_workspace() self.install_dependencies() self.package(ignore)	[ "def", "build", "(", "self", ",", "ignore", "=", "None", ")", ":", "self", ".", "_prepare_workspace", "(", ")", "self", ".", "install_dependencies", "(", ")", "self", ".", "package", "(", "ignore", ")" ]	38.8	0.010101
def put_event_multi_touch(self, count, contacts, scan_time): """Sends a multi-touch pointer event. The coordinates are expressed in pixels and start from [1,1] which corresponds to the top left corner of the virtual display. The guest may not understan...	[ "def", "put_event_multi_touch", "(", "self", ",", "count", ",", "contacts", ",", "scan_time", ")", ":", "if", "not", "isinstance", "(", "count", ",", "baseinteger", ")", ":", "raise", "TypeError", "(", "\"count can only be an instance of type baseinteger\"", ")", ...	42.085106	0.008399
def factorize( self, na_sentinel: int = -1, ) -> Tuple[np.ndarray, ABCExtensionArray]: """ Encode the extension array as an enumerated type. Parameters ---------- na_sentinel : int, default -1 Value to use in the `labels` array to indicate...	[ "def", "factorize", "(", "self", ",", "na_sentinel", ":", "int", "=", "-", "1", ",", ")", "->", "Tuple", "[", "np", ".", "ndarray", ",", "ABCExtensionArray", "]", ":", "# Impelmentor note: There are two ways to override the behavior of", "# pandas.factorize", "# 1. ...	33.843137	0.001689
def _compute_global_interested_rts(self): """Computes current global interested RTs for global tables. Computes interested RTs based on current RT filters for peers. This filter should be used to check if for RTs on a path that is installed in any global table (expect RT Table). ...	[ "def", "_compute_global_interested_rts", "(", "self", ")", ":", "interested_rts", "=", "set", "(", ")", "for", "rtfilter", "in", "self", ".", "_peer_to_rtfilter_map", ".", "values", "(", ")", ":", "interested_rts", ".", "update", "(", "rtfilter", ")", "interes...	47.764706	0.002415
def apply_rectwv_coeff(reduced_image, rectwv_coeff, args_resampling=2, args_ignore_dtu_configuration=True, debugplot=0): """Compute rectification and wavelength calibration coefficients. Parameters ---------- re...	[ "def", "apply_rectwv_coeff", "(", "reduced_image", ",", "rectwv_coeff", ",", "args_resampling", "=", "2", ",", "args_ignore_dtu_configuration", "=", "True", ",", "debugplot", "=", "0", ")", ":", "logger", "=", "logging", ".", "getLogger", "(", "__name__", ")", ...	38.588496	0.000112
def compile_file(fullpath, outfile_name, compiler_args): """Calls HamlPy compiler.""" if Options.VERBOSE: print '%s %s -> %s' % (strftime("%H:%M:%S"), fullpath, outfile_name) try: if Options.DEBUG: print "Compiling %s -> %s" % (fullpath, outfile_name) haml_lines = codecs....	[ "def", "compile_file", "(", "fullpath", ",", "outfile_name", ",", "compiler_args", ")", ":", "if", "Options", ".", "VERBOSE", ":", "print", "'%s %s -> %s'", "%", "(", "strftime", "(", "\"%H:%M:%S\"", ")", ",", "fullpath", ",", "outfile_name", ")", "try", ":"...	46.933333	0.009749
def write_connection_file(self): """write connection info to JSON file""" if os.path.basename(self.connection_file) == self.connection_file: cf = os.path.join(self.profile_dir.security_dir, self.connection_file) else: cf = self.connection_file write_connection_fil...	[ "def", "write_connection_file", "(", "self", ")", ":", "if", "os", ".", "path", ".", "basename", "(", "self", ".", "connection_file", ")", "==", "self", ".", "connection_file", ":", "cf", "=", "os", ".", "path", ".", "join", "(", "self", ".", "profile_...	47.272727	0.013208
def demo(context): """Setup a scout demo instance. This instance will be populated with a case, a gene panel and some variants. """ LOG.info("Running scout setup demo") institute_name = context.obj['institute_name'] user_name = context.obj['user_name'] user_mail = context.obj['user_mail']...	[ "def", "demo", "(", "context", ")", ":", "LOG", ".", "info", "(", "\"Running scout setup demo\"", ")", "institute_name", "=", "context", ".", "obj", "[", "'institute_name'", "]", "user_name", "=", "context", ".", "obj", "[", "'user_name'", "]", "user_mail", ...	28.7	0.011804
def rlecode_hqx(s): """ Run length encoding for binhex4. The CPython implementation does not do run length encoding of \x90 characters. This implementation does. """ if not s: return '' result = [] prev = s[0] count = 1 # Add a dummy character to get the loop to go one ex...	[ "def", "rlecode_hqx", "(", "s", ")", ":", "if", "not", "s", ":", "return", "''", "result", "=", "[", "]", "prev", "=", "s", "[", "0", "]", "count", "=", "1", "# Add a dummy character to get the loop to go one extra round.", "# The dummy must be different from the ...	29.023256	0.000775
def weight_layers(name, bilm_ops, l2_coef=None, use_top_only=False, do_layer_norm=False, reuse=False): """ Weight the layers of a biLM with trainable scalar weights to compute ELMo representations. For each output layer, this returns two ops. The first computes a layer specif...	[ "def", "weight_layers", "(", "name", ",", "bilm_ops", ",", "l2_coef", "=", "None", ",", "use_top_only", "=", "False", ",", "do_layer_norm", "=", "False", ",", "reuse", "=", "False", ")", ":", "def", "_l2_regularizer", "(", "weights", ")", ":", "if", "l2_...	37.795455	0.001172
def generate_mediation_matrix(dsm): """ Generate the mediation matrix of the given matrix. Rules for mediation matrix generation: Set -1 for items NOT to be considered Set 0 for items which MUST NOT be present Set 1 for items which MUST be present Each module h...	[ "def", "generate_mediation_matrix", "(", "dsm", ")", ":", "cat", "=", "dsm", ".", "categories", "ent", "=", "dsm", ".", "entities", "size", "=", "dsm", ".", "size", "[", "0", "]", "if", "not", "cat", ":", "cat", "=", "[", "'appmodule'", "]", "*", "...	42.387755	0.00047
def get_request_parameters(self, request_body_type="", method="", authn_method='', request_args=None, http_args=None, **kwargs): """ Builds the request message and constructs the HTTP headers. This is the starting point for a pipelin...	[ "def", "get_request_parameters", "(", "self", ",", "request_body_type", "=", "\"\"", ",", "method", "=", "\"\"", ",", "authn_method", "=", "''", ",", "request_args", "=", "None", ",", "http_args", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "no...	38.628571	0.001442
def _set_static_ip(name, session, vm_): ''' Set static IP during create() if defined ''' ipv4_cidr = '' ipv4_gw = '' if 'ipv4_gw' in vm_.keys(): log.debug('ipv4_gw is found in keys') ipv4_gw = vm_['ipv4_gw'] if 'ipv4_cidr' in vm_.keys(): log.debug('ipv4_cidr is found ...	[ "def", "_set_static_ip", "(", "name", ",", "session", ",", "vm_", ")", ":", "ipv4_cidr", "=", "''", "ipv4_gw", "=", "''", "if", "'ipv4_gw'", "in", "vm_", ".", "keys", "(", ")", ":", "log", ".", "debug", "(", "'ipv4_gw is found in keys'", ")", "ipv4_gw", ...	33.285714	0.002088
def _get(self, **kwargs): """Get the resource from a remote Transifex server.""" path = self._construct_path_to_item() return self._http.get(path)	[ "def", "_get", "(", "self", ",", "", "", "kwargs", ")", ":", "path", "=", "self", ".", "_construct_path_to_item", "(", ")", "return", "self", ".", "_http", ".", "get", "(", "path", ")" ]	41.75	0.011765
def merge_checkpoint(input_graph, checkpoint, output_node_names, output_graph, sess): """ Get the variable values from the checkpoint file, and merge them to the GraphDef file Args: input_graph: the GraphDef file, do...	[ "def", "merge_checkpoint", "(", "input_graph", ",", "checkpoint", ",", "output_node_names", ",", "output_graph", ",", "sess", ")", ":", "restore_op_name", "=", "\"save/restore_all\"", "filename_tensor_name", "=", "\"save/Const:0\"", "input_graph_def", "=", "graph_pb2", ...	34.027778	0.001587
def exception(self, timeout=None): """Return a exception raised by the call that the future represents. :param timeout: The number of seconds to wait for the exception if the future has not been completed. None, the default, sets no limit. :returns: The exception ...	[ "def", "exception", "(", "self", ",", "timeout", "=", "None", ")", ":", "with", "self", ".", "__condition", ":", "if", "self", ".", "__state", "==", "FINISHED", ":", "return", "self", ".", "__exception", "lock", "=", "get_lock", "(", ")", "if", "lock",...	38.192308	0.001965
def set_direct(self, address_value_dict): """Called in the context manager's set method to either overwrite the value for an address, or create a new future and immediately set a value in the future. Args: address_value_dict (dict of str:bytes): The unique full addresses ...	[ "def", "set_direct", "(", "self", ",", "address_value_dict", ")", ":", "with", "self", ".", "_lock", ":", "for", "address", ",", "value", "in", "address_value_dict", ".", "items", "(", ")", ":", "self", ".", "_validate_write", "(", "address", ")", "if", ...	37.681818	0.002353
def main(): """ The main function of the Andes command-line tool. This function executes the following workflow: * Parse the command line inputs * Show the tool preamble * Output the requested helps, edit/save configs or remove outputs. Exit the main program if any of the above is ex...	[ "def", "main", "(", ")", ":", "t0", ",", "s", "=", "elapsed", "(", ")", "# parser command line arguments", "args", "=", "vars", "(", "cli_new", "(", ")", ")", "# configure stream handler verbose level", "config_logger", "(", "log_path", "=", "misc", ".", "get_...	29.027778	0.000925
def trans_coeff(eq, x, y, z): """This function is provided by MOKA2 Development Team (1996.xx.xx) and used in SOSS system.""" tt = (eq - 2000.0) / 100.0 zeta = 2306.2181 * tt + 0.30188 * tt * tt + 0.017998 * tt * tt * tt zetto = 2306.2181 * tt + 1.09468 * tt * tt + 0.018203 * tt * tt * tt theta...	[ "def", "trans_coeff", "(", "eq", ",", "x", ",", "y", ",", "z", ")", ":", "tt", "=", "(", "eq", "-", "2000.0", ")", "/", "100.0", "zeta", "=", "2306.2181", "", "tt", "+", "0.30188", "", "tt", "", "tt", "+", "0.017998", "", "tt", "*", "tt",...	42.071429	0.00083
def get_bios_settings(irmc_info): """Get the current BIOS settings on the server :param irmc_info: node info. :returns: a list of dictionary BIOS settings """ bios_config = backup_bios_config(irmc_info)['bios_config'] bios_config_data = bios_config['Server']['SystemConfig']['BiosConfig'] s...	[ "def", "get_bios_settings", "(", "irmc_info", ")", ":", "bios_config", "=", "backup_bios_config", "(", "irmc_info", ")", "[", "'bios_config'", "]", "bios_config_data", "=", "bios_config", "[", "'Server'", "]", "[", "'SystemConfig'", "]", "[", "'BiosConfig'", "]", ...	40.263158	0.001277
def _load_commands(root): """Returns {name: Command}""" def proto_text(t): if t.tag == 'name': return '{name}' elif t.tag == 'ptype': return '{type}' out = [] if t.text: out.append(_escape_tpl_str(t.text)) for x in t: out.ap...	[ "def", "_load_commands", "(", "root", ")", ":", "def", "proto_text", "(", "t", ")", ":", "if", "t", ".", "tag", "==", "'name'", ":", "return", "'{name}'", "elif", "t", ".", "tag", "==", "'ptype'", ":", "return", "'{type}'", "out", "=", "[", "]", "i...	37	0.001054
def read_feather(path, columns=None, use_threads=True): """ Load a feather-format object from the file path .. versionadded 0.20.0 Parameters ---------- path : string file path, or file-like object columns : sequence, default None If not provided, all columns are read .. v...	[ "def", "read_feather", "(", "path", ",", "columns", "=", "None", ",", "use_threads", "=", "True", ")", ":", "feather", ",", "pyarrow", "=", "_try_import", "(", ")", "path", "=", "_stringify_path", "(", "path", ")", "if", "LooseVersion", "(", "pyarrow", "...	28.525	0.000847
def get_as_map_with_default(self, key, default_value): """ Converts map element into an AnyValueMap or returns default value if conversion is not possible. :param key: a key of element to get. :param default_value: the default value :return: AnyValueMap value of the element or...	[ "def", "get_as_map_with_default", "(", "self", ",", "key", ",", "default_value", ")", ":", "value", "=", "self", ".", "get_as_nullable_map", "(", "key", ")", "return", "MapConverter", ".", "to_map_with_default", "(", "value", ",", "default_value", ")" ]	40.25	0.008097
def multi_bulk(self, args): '''Multi bulk encoding for list/tuple ``args`` ''' return null_array if args is None else b''.join(self._pack(args))	[ "def", "multi_bulk", "(", "self", ",", "args", ")", ":", "return", "null_array", "if", "args", "is", "None", "else", "b''", ".", "join", "(", "self", ".", "_pack", "(", "args", ")", ")" ]	41.25	0.011905
def get_koji_module_build(session, module_spec): """ Get build information from Koji for a module. The module specification must include at least name, stream and version. For legacy support, you can omit context if there is only one build of the specified NAME:STREAM:VERSION. :param session: KojiS...	[ "def", "get_koji_module_build", "(", "session", ",", "module_spec", ")", ":", "if", "module_spec", ".", "context", "is", "not", "None", ":", "# The easy case - we can build the koji \"name-version-release\" out of the", "# module spec.", "koji_nvr", "=", "\"{}-{}-{}.{}\"", ...	45.944444	0.001579
def throw(self, type, value=None, traceback=None): # pylint: disable=redefined-builtin """Raise an exception in this element""" return self.__wrapped__.throw(type, value, traceback)	[ "def", "throw", "(", "self", ",", "type", ",", "value", "=", "None", ",", "traceback", "=", "None", ")", ":", "# pylint: disable=redefined-builtin", "return", "self", ".", "__wrapped__", ".", "throw", "(", "type", ",", "value", ",", "traceback", ")" ]	65.333333	0.015152
def get_mean_DEV(sum_ptrm_checks, sum_abs_ptrm_checks, n_pTRM, delta_x_prime): """ input: sum_ptrm_checks, sum_abs_ptrm_checks, n_pTRM, delta_x_prime output: Mean deviation of a pTRM check """ if not n_pTRM: return float('nan'), float('nan') mean_DEV = ((old_div(1., n_pTRM)) * (old_div(s...	[ "def", "get_mean_DEV", "(", "sum_ptrm_checks", ",", "sum_abs_ptrm_checks", ",", "n_pTRM", ",", "delta_x_prime", ")", ":", "if", "not", "n_pTRM", ":", "return", "float", "(", "'nan'", ")", ",", "float", "(", "'nan'", ")", "mean_DEV", "=", "(", "(", "old_div...	48.3	0.00813
def df2chucks(din,chunksize,outd,fn,return_fmt='\t',force=False): """ :param return_fmt: '\t': tab-sep file, lly, '.', 'list': returns a list """ from os.path import exists#,splitext,dirname,splitext,basename,realpath from os import makedirs din.index=range(0,len(din),1) chunkrange=list(np....	[ "def", "df2chucks", "(", "din", ",", "chunksize", ",", "outd", ",", "fn", ",", "return_fmt", "=", "'\\t'", ",", "force", "=", "False", ")", ":", "from", "os", ".", "path", "import", "exists", "#,splitext,dirname,splitext,basename,realpath", "from", "os", "im...	31.529412	0.030769
def add_management_certificate(self, public_key, thumbprint, data): ''' The Add Management Certificate operation adds a certificate to the list of management certificates. Management certificates, which are also known as subscription certificates, authenticate clients attempting ...	[ "def", "add_management_certificate", "(", "self", ",", "public_key", ",", "thumbprint", ",", "data", ")", ":", "_validate_not_none", "(", "'public_key'", ",", "public_key", ")", "_validate_not_none", "(", "'thumbprint'", ",", "thumbprint", ")", "_validate_not_none", ...	44.956522	0.001894
def make_muc_userinfo(self): """ Create <x xmlns="...muc#user"/> element in the stanza. :return: the element created. :returntype: `MucUserX` """ self.clear_muc_child() self.muc_child=MucUserX(parent=self.xmlnode) return self.muc_child	[ "def", "make_muc_userinfo", "(", "self", ")", ":", "self", ".", "clear_muc_child", "(", ")", "self", ".", "muc_child", "=", "MucUserX", "(", "parent", "=", "self", ".", "xmlnode", ")", "return", "self", ".", "muc_child" ]	29.1	0.01
def coastal_coords(): """ A coastal coord is a 2-tuple: (tile id, direction). An edge is coastal if it is on the grid's border. :return: list( (tile_id, direction) ) """ coast = list() for tile_id in coastal_tile_ids(): tile_coord = tile_id_to_coord(tile_id) for edge_coord ...	[ "def", "coastal_coords", "(", ")", ":", "coast", "=", "list", "(", ")", "for", "tile_id", "in", "coastal_tile_ids", "(", ")", ":", "tile_coord", "=", "tile_id_to_coord", "(", "tile_id", ")", "for", "edge_coord", "in", "coastal_edges", "(", "tile_id", ")", ...	33.705882	0.001698
def enable() -> None: """Patch ``sys.stdout`` to use ``DebugPrint``.""" if not isinstance(sys.stdout, DebugPrint): sys.stdout = DebugPrint(sys.stdout)	[ "def", "enable", "(", ")", "->", "None", ":", "if", "not", "isinstance", "(", "sys", ".", "stdout", ",", "DebugPrint", ")", ":", "sys", ".", "stdout", "=", "DebugPrint", "(", "sys", ".", "stdout", ")" ]	43.75	0.011236
def legendre_lm(l, m, z, normalization='4pi', csphase=1, cnorm=0): """ Compute the associated Legendre function for a specific degree and order. Usage ----- plm = legendre_lm (l, m, z, [normalization, csphase, cnorm]) Returns ------- plm : float The associated Legendre function...	[ "def", "legendre_lm", "(", "l", ",", "m", ",", "z", ",", "normalization", "=", "'4pi'", ",", "csphase", "=", "1", ",", "cnorm", "=", "0", ")", ":", "if", "l", "<", "0", ":", "raise", "ValueError", "(", "\"The degree l must be greater or equal to 0. Input v...	39.661017	0.000417
def check_messages(filename, report_empty=False): """ Checks messages in `filename` in various ways: * Translations must have the same slots as the English. * Messages can't have astral characters in them. If `report_empty` is True, will also report empty translation strings. Returns the pro...	[ "def", "check_messages", "(", "filename", ",", "report_empty", "=", "False", ")", ":", "problems", "=", "[", "]", "pomsgs", "=", "polib", ".", "pofile", "(", "filename", ")", "for", "msg", "in", "pomsgs", ":", "# Check for characters Javascript can't support.", ...	36.032258	0.001743
def getnodes(self, name): "Return the direct subnodes with name 'name'" for node in self.nodes: if striptag(node.tag) == name: yield node	[ "def", "getnodes", "(", "self", ",", "name", ")", ":", "for", "node", "in", "self", ".", "nodes", ":", "if", "striptag", "(", "node", ".", "tag", ")", "==", "name", ":", "yield", "node" ]	35.4	0.01105
def split(url): """Split URL into scheme, netloc, path, query and fragment. >>> split('http://www.example.com/abc?x=1&y=2#foo') SplitResult(scheme='http', netloc='www.example.com', path='/abc', query='x=1&y=2', fragment='foo') """ scheme = netloc = path = query = fragment = '' ip6_start = url.f...	[ "def", "split", "(", "url", ")", ":", "scheme", "=", "netloc", "=", "path", "=", "query", "=", "fragment", "=", "''", "ip6_start", "=", "url", ".", "find", "(", "'['", ")", "scheme_end", "=", "url", ".", "find", "(", "':'", ")", "if", "ip6_start", ...	30.5	0.001095
def realimag_files(xscript=0, yscript="d[1]+1jd[2]", eyscript=None, exscript=None, paths=None, g=None, *kwargs): """ This will load a bunch of data files, generate data based on the supplied scripts, and then plot the ydata's real and imaginary parts versus xdata. Parameters ---------- xscrip...	[ "def", "realimag_files", "(", "xscript", "=", "0", ",", "yscript", "=", "\"d[1]+1jd[2]\"", ",", "eyscript", "=", "None", ",", "exscript", "=", "None", ",", "paths", "=", "None", ",", "g", "=", "None", ",", "", "*", "kwargs", ")", ":", "return", "fi...	35.37931	0.009488
def EndVector(self, vectorNumElems): """EndVector writes data necessary to finish vector construction.""" self.assertNested() ## @cond FLATBUFFERS_INTERNAL self.nested = False ## @endcond # we already made space for this, so write without PrependUint32 self.Place...	[ "def", "EndVector", "(", "self", ",", "vectorNumElems", ")", ":", "self", ".", "assertNested", "(", ")", "## @cond FLATBUFFERS_INTERNAL", "self", ".", "nested", "=", "False", "## @endcond", "# we already made space for this, so write without PrependUint32", "self", ".", ...	36.4	0.010724
def f_supports(self, data): """ Simply checks if data is supported """ if isinstance(data, Quantity): return True elif super(Brian2Parameter, self).f_supports(data): return True return False	[ "def", "f_supports", "(", "self", ",", "data", ")", ":", "if", "isinstance", "(", "data", ",", "Quantity", ")", ":", "return", "True", "elif", "super", "(", "Brian2Parameter", ",", "self", ")", ".", "f_supports", "(", "data", ")", ":", "return", "True"...	34.285714	0.00813
def read_header(filename, return_idxs=False): """ Read blimpy header and return a Python dictionary of key:value pairs Args: filename (str): name of file to open Optional args: return_idxs (bool): Default False. If true, returns the file offset indexes for value...	[ "def", "read_header", "(", "filename", ",", "return_idxs", "=", "False", ")", ":", "with", "open", "(", "filename", ",", "'rb'", ")", "as", "fh", ":", "header_dict", "=", "{", "}", "header_idxs", "=", "{", "}", "# Check this is a blimpy file", "keyword", "...	26.486486	0.001969
def f2p_list(phrase, max_word_size=15, cutoff=3): """Convert a phrase from Finglish to Persian. phrase: The phrase to convert. max_word_size: Maximum size of the words to consider. Words larger than this will be kept unchanged. cutoff: The cut-off point. For each word, there could be many pos...	[ "def", "f2p_list", "(", "phrase", ",", "max_word_size", "=", "15", ",", "cutoff", "=", "3", ")", ":", "# split the phrase into words", "results", "=", "[", "w", "for", "w", "in", "sep_regex", ".", "split", "(", "phrase", ")", "if", "w", "]", "# return an...	29.758621	0.001122
def tokenise(cls, route): ''' Split a string into an iterator of (type, value) tokens. ''' match = None for match in cls.syntax.finditer(route): pre, name, rex = match.groups() if pre: yield ('TXT', pre.replace('\\:',':')) if rex and name: yield ('VAR', (rex, ...	[ "def", "tokenise", "(", "cls", ",", "route", ")", ":", "match", "=", "None", "for", "match", "in", "cls", ".", "syntax", ".", "finditer", "(", "route", ")", ":", "pre", ",", "name", ",", "rex", "=", "match", ".", "groups", "(", ")", "if", "pre", ...	45.615385	0.014876
def parse_config(file_name='/usr/local/etc/pkg.conf'): ''' Return dict of uncommented global variables. CLI Example: .. code-block:: bash salt '*' pkg.parse_config ``NOTE:`` not working properly right now ''' ret = {} if not os.path.isfile(file_name): return 'Unable t...	[ "def", "parse_config", "(", "file_name", "=", "'/usr/local/etc/pkg.conf'", ")", ":", "ret", "=", "{", "}", "if", "not", "os", ".", "path", ".", "isfile", "(", "file_name", ")", ":", "return", "'Unable to find {0} on file system'", ".", "format", "(", "file_nam...	27.269231	0.001362
def kpath_from_seekpath(cls, seekpath, point_coords): r"""Convert seekpath-formatted kpoints path to sumo-preferred format. If 'GAMMA' is used as a label this will be replaced by '\Gamma'. Args: seekpath (list): A :obj:`list` of 2-tuples containing the labels at eac...	[ "def", "kpath_from_seekpath", "(", "cls", ",", "seekpath", ",", "point_coords", ")", ":", "# convert from seekpath format e.g. [(l1, l2), (l2, l3), (l4, l5)]", "# to our preferred representation [[l1, l2, l3], [l4, l5]]", "path", "=", "[", "[", "seekpath", "[", "0", "]", "[",...	37.816327	0.001052
def adjustSize( self ): """ Adjusts the size of this node to support the length of its contents. """ cell = self.scene().cellWidth() * 2 minheight = cell minwidth = 2 * cell # fit to the grid size metrics = QFontMetrics(QApplication.font()) ...	[ "def", "adjustSize", "(", "self", ")", ":", "cell", "=", "self", ".", "scene", "(", ")", ".", "cellWidth", "(", ")", "", "2", "minheight", "=", "cell", "minwidth", "=", "2", "", "cell", "# fit to the grid size", "metrics", "=", "QFontMetrics", "(", "...	29.361111	0.015568
def files_in_directory(db, user_id, db_dirname): """ Return files in a directory. """ fields = _file_default_fields() rows = db.execute( select( fields, ).where( _is_in_directory(files, user_id, db_dirname), ).order_by( files.c.user_id, ...	[ "def", "files_in_directory", "(", "db", ",", "user_id", ",", "db_dirname", ")", ":", "fields", "=", "_file_default_fields", "(", ")", "rows", "=", "db", ".", "execute", "(", "select", "(", "fields", ",", ")", ".", "where", "(", "_is_in_directory", "(", "...	27.45	0.001761
def get( self, key: str, default: typing.Any = UNSET, type_: typing.Type[typing.Any] = str, subtype: typing.Type[typing.Any] = str, mapper: typing.Optional[typing.Callable[[object], object]] = None, ) -> typing.Any: """ Parse a value from an environmen...	[ "def", "get", "(", "self", ",", "key", ":", "str", ",", "default", ":", "typing", ".", "Any", "=", "UNSET", ",", "type_", ":", "typing", ".", "Type", "[", "typing", ".", "Any", "]", "=", "str", ",", "subtype", ":", "typing", ".", "Type", "[", "...	29.017544	0.001754
def get_active_entry(user, select_for_update=False): """Returns the user's currently-active entry, or None.""" entries = apps.get_model('entries', 'Entry').no_join if select_for_update: entries = entries.select_for_update() entries = entries.filter(user=user, end_time__isnull=True) if not e...	[ "def", "get_active_entry", "(", "user", ",", "select_for_update", "=", "False", ")", ":", "entries", "=", "apps", ".", "get_model", "(", "'entries'", ",", "'Entry'", ")", ".", "no_join", "if", "select_for_update", ":", "entries", "=", "entries", ".", "select...	38.583333	0.00211
def remount(name, device, mkmnt=False, fstype='', opts='defaults', user=None): ''' Attempt to remount a device, if the device is not already mounted, mount is called CLI Example: .. code-block:: bash salt '*' mount.remount /mnt/foo /dev/sdz1 True ''' force_mount = False if __g...	[ "def", "remount", "(", "name", ",", "device", ",", "mkmnt", "=", "False", ",", "fstype", "=", "''", ",", "opts", "=", "'defaults'", ",", "user", "=", "None", ")", ":", "force_mount", "=", "False", "if", "__grains__", "[", "'os'", "]", "in", "[", "'...	35.839286	0.001455
def fastp_filtered_reads_chart(self): """ Function to generate the fastp filtered reads bar plot """ # Specify the order of the different possible categories keys = OrderedDict() keys['filtering_result_passed_filter_reads'] = { 'name': 'Passed Filter' } keys['filtering_result_lo...	[ "def", "fastp_filtered_reads_chart", "(", "self", ")", ":", "# Specify the order of the different possible categories", "keys", "=", "OrderedDict", "(", ")", "keys", "[", "'filtering_result_passed_filter_reads'", "]", "=", "{", "'name'", ":", "'Passed Filter'", "}", "keys...	47.277778	0.019585
def listDatasetChildren(self, dataset): """ takes required dataset parameter returns only children dataset name """ if( dataset == "" ): dbsExceptionHandler("dbsException-invalid-input", "DBSDataset/listDatasetChildren. Parent Dataset name is required.") conn ...	[ "def", "listDatasetChildren", "(", "self", ",", "dataset", ")", ":", "if", "(", "dataset", "==", "\"\"", ")", ":", "dbsExceptionHandler", "(", "\"dbsException-invalid-input\"", ",", "\"DBSDataset/listDatasetChildren. Parent Dataset name is required.\"", ")", "conn", "=", ...	35.857143	0.009709
def update_file(self, path): ''' Updates the file watcher and calls the appropriate method for results @return: False if we need to keep trying the connection ''' try: # grab the file result, stat = self.zoo_client.get(path, watch=self.watch_file) ...	[ "def", "update_file", "(", "self", ",", "path", ")", ":", "try", ":", "# grab the file", "result", ",", "stat", "=", "self", ".", "zoo_client", ".", "get", "(", "path", ",", "watch", "=", "self", ".", "watch_file", ")", "except", "ZookeeperError", ":", ...	35.606061	0.001657
def _speak_normal(self, element): """ Speak the content of element only. :param element: The element. :type element: hatemile.util.html.htmldomelement.HTMLDOMElement """ if element.has_attribute(AccessibleCSSImplementation.DATA_SPEAK): if ( (...	[ "def", "_speak_normal", "(", "self", ",", "element", ")", ":", "if", "element", ".", "has_attribute", "(", "AccessibleCSSImplementation", ".", "DATA_SPEAK", ")", ":", "if", "(", "(", "element", ".", "get_attribute", "(", "AccessibleCSSImplementation", ".", "DATA...	35.958333	0.002257
def to_filename(data, mask=DEFAULT_PAPERS_FILENAME_MASK, extra_formatters=None): """ Convert a bibtex entry to a formatted filename according to a given mask. .. note :: Available formatters out of the box are: - ``journal`` - ``title`` ...	[ "def", "to_filename", "(", "data", ",", "mask", "=", "DEFAULT_PAPERS_FILENAME_MASK", ",", "extra_formatters", "=", "None", ")", ":", "# Handle default argument", "if", "extra_formatters", "is", "None", ":", "extra_formatters", "=", "{", "}", "entry", "=", "data", ...	32.258065	0.000485
def validate_wrap(self, value): ''' Check that ``value`` is valid for unwrapping with ``ComputedField.computed_type``''' try: self.computed_type.validate_wrap(value) except BadValueException as bve: self._fail_validation(value, 'Bad value for computed field', cause=bve)	[ "def", "validate_wrap", "(", "self", ",", "value", ")", ":", "try", ":", "self", ".", "computed_type", ".", "validate_wrap", "(", "value", ")", "except", "BadValueException", "as", "bve", ":", "self", ".", "_fail_validation", "(", "value", ",", "'Bad value f...	52.166667	0.012579
def gen_binary(table, output, ascii_props=False, append=False, prefix=""): """Generate binary properties.""" categories = [] binary_props = ( ('DerivedCoreProperties.txt', None), ('PropList.txt', None), ('DerivedNormalizationProps.txt', ('Changes_When_NFKC_Casefolded', 'Full_Composi...	[ "def", "gen_binary", "(", "table", ",", "output", ",", "ascii_props", "=", "False", ",", "append", "=", "False", ",", "prefix", "=", "\"\"", ")", ":", "categories", "=", "[", "]", "binary_props", "=", "(", "(", "'DerivedCoreProperties.txt'", ",", "None", ...	36.551724	0.002143
def export_process_element(definitions, process_id, process_attributes_dictionary): """ Creates process element for exported BPMN XML file. :param process_id: string object. ID of exported process element, :param definitions: an XML element ('definitions'), root element of BPMN 2.0 docu...	[ "def", "export_process_element", "(", "definitions", ",", "process_id", ",", "process_attributes_dictionary", ")", ":", "process", "=", "eTree", ".", "SubElement", "(", "definitions", ",", "consts", ".", "Consts", ".", "process", ")", "process", ".", "set", "(",...	57.875	0.008502
def create_token(user, client, scope, id_token_dic=None): """ Create and populate a Token object. Return a Token object. """ token = Token() token.user = user token.client = client token.access_token = uuid.uuid4().hex if id_token_dic is not None: token.id_token = id_token_d...	[ "def", "create_token", "(", "user", ",", "client", ",", "scope", ",", "id_token_dic", "=", "None", ")", ":", "token", "=", "Token", "(", ")", "token", ".", "user", "=", "user", "token", ".", "client", "=", "client", "token", ".", "access_token", "=", ...	25.894737	0.001961
def arrows(self): """Iterate over all my arrows.""" for o in self.arrow.values(): for arro in o.values(): yield arro	[ "def", "arrows", "(", "self", ")", ":", "for", "o", "in", "self", ".", "arrow", ".", "values", "(", ")", ":", "for", "arro", "in", "o", ".", "values", "(", ")", ":", "yield", "arro" ]	31.2	0.0125
def parseBEDString(line, scoreType=int, dropAfter=None): """ Parse a string in BED format and return a GenomicInterval object. :param line: the string to be parsed :param dropAfter: an int indicating that any fields after and including this field should be ignored as they don't conform to ...	[ "def", "parseBEDString", "(", "line", ",", "scoreType", "=", "int", ",", "dropAfter", "=", "None", ")", ":", "peices", "=", "line", ".", "split", "(", "\"\\t\"", ")", "if", "dropAfter", "is", "not", "None", ":", "peices", "=", "peices", "[", "0", ":"...	33.823529	0.01268
def _get_var_decl_init_value(self, _ctype, children): """ Gathers initialisation values by parsing children nodes of a VAR_DECL. """ # FIXME TU for INIT_LIST_EXPR # FIXME: always return [(child.kind,child.value),...] # FIXME: simplify this redondant code. init_va...	[ "def", "_get_var_decl_init_value", "(", "self", ",", "_ctype", ",", "children", ")", ":", "# FIXME TU for INIT_LIST_EXPR", "# FIXME: always return [(child.kind,child.value),...]", "# FIXME: simplify this redondant code.", "init_value", "=", "[", "]", "children", "=", "list", ...	39.208333	0.002075
def makepilimage(self, scale = "log", negative = False): """ Makes a PIL image out of the array, respecting the z1 and z2 cutoffs. By default we use a log scaling identical to iraf's, and produce an image of mode "L", i.e. grayscale. But some drawings or colourscales will change the mode...	[ "def", "makepilimage", "(", "self", ",", "scale", "=", "\"log\"", ",", "negative", "=", "False", ")", ":", "if", "scale", "==", "\"log\"", "or", "scale", "==", "\"lin\"", ":", "self", ".", "negative", "=", "negative", "numpyarrayshape", "=", "self", ".",...	41.901515	0.014836
def _chunk_putter(self, uri, open_file, headers=None): """Make many PUT request for a single chunked object. Objects that are processed by this method have a SHA256 hash appended to the name as well as a count for object indexing which starts at 0. To make a PUT request pass, ``url`` ...	[ "def", "_chunk_putter", "(", "self", ",", "uri", ",", "open_file", ",", "headers", "=", "None", ")", ":", "count", "=", "0", "dynamic_hash", "=", "hashlib", ".", "sha256", "(", "self", ".", "job_args", ".", "get", "(", "'container'", ")", ")", "dynamic...	34.115385	0.001096
def push_tx(self, crypto, tx_hex): """ This method is untested. """ url = "%s/pushtx" % self.base_url return self.post_url(url, {'hex': tx_hex}).content	[ "def", "push_tx", "(", "self", ",", "crypto", ",", "tx_hex", ")", ":", "url", "=", "\"%s/pushtx\"", "%", "self", ".", "base_url", "return", "self", ".", "post_url", "(", "url", ",", "{", "'hex'", ":", "tx_hex", "}", ")", ".", "content" ]	31.166667	0.010417
def process(self, element): """Run batch prediciton on a TF graph. Args: element: list of strings, representing one batch input to the TF graph. """ import collections import apache_beam as beam num_in_batch = 0 try: assert self._session is not None feed_dict = collectio...	[ "def", "process", "(", "self", ",", "element", ")", ":", "import", "collections", "import", "apache_beam", "as", "beam", "num_in_batch", "=", "0", "try", ":", "assert", "self", ".", "_session", "is", "not", "None", "feed_dict", "=", "collections", ".", "de...	32.592593	0.014892
def _get_content(self, params, mode_translate): """ This method gets the token and makes the header variable that will be used in connection authentication. After that, calls the _make_request() method to return the desired data. """ token = self._get_...	[ "def", "_get_content", "(", "self", ",", "params", ",", "mode_translate", ")", ":", "token", "=", "self", ".", "_get_token", "(", ")", "headers", "=", "{", "'Authorization'", ":", "'Bearer '", "+", "token", "}", "parameters", "=", "params", "translation_url"...	46.909091	0.009506
def _send_commit_request(self, retry_delay=None, attempt=None): """Send a commit request with our last_processed_offset""" # If there's a _commit_call, and it's not active, clear it, it probably # just called us... if self._commit_call and not self._commit_call.active(): self...	[ "def", "_send_commit_request", "(", "self", ",", "retry_delay", "=", "None", ",", "attempt", "=", "None", ")", ":", "# If there's a _commit_call, and it's not active, clear it, it probably", "# just called us...", "if", "self", ".", "_commit_call", "and", "not", "self", ...	43.228571	0.001293
def get_offset(name): """ Return DateOffset object associated with rule name Examples -------- get_offset('EOM') --> BMonthEnd(1) """ if name not in libfreqs._dont_uppercase: name = name.upper() name = libfreqs._lite_rule_alias.get(name, name) name = libfreqs._lite_r...	[ "def", "get_offset", "(", "name", ")", ":", "if", "name", "not", "in", "libfreqs", ".", "_dont_uppercase", ":", "name", "=", "name", ".", "upper", "(", ")", "name", "=", "libfreqs", ".", "_lite_rule_alias", ".", "get", "(", "name", ",", "name", ")", ...	31.37931	0.001066
def remove_user(name, profile='github'): ''' Remove a Github user by name. name The user for which to obtain information. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. code-block:: bash salt myminion github.remove_user ...	[ "def", "remove_user", "(", "name", ",", "profile", "=", "'github'", ")", ":", "client", "=", "_get_client", "(", "profile", ")", "organization", "=", "client", ".", "get_organization", "(", "_get_config_value", "(", "profile", ",", "'org_name'", ")", ")", "t...	23.28125	0.001289
def unix_timestamp_to_datetime(unix_timestamp): """ <Purpose> Convert 'unix_timestamp' (i.e., POSIX time, in UNIX_TIMESTAMP_SCHEMA format) to a datetime.datetime() object. 'unix_timestamp' is the number of seconds since the epoch (January 1, 1970.) >>> datetime_object = unix_timestamp_to_datetime(...	[ "def", "unix_timestamp_to_datetime", "(", "unix_timestamp", ")", ":", "# Is 'unix_timestamp' properly formatted?", "# Raise 'securesystemslib.exceptions.FormatError' if there is a mismatch.", "securesystemslib", ".", "formats", ".", "UNIX_TIMESTAMP_SCHEMA", ".", "check_match", "(", "...	33.853659	0.009804
def append_search_summary(xmldoc, process, shared_object = "standalone", lalwrapper_cvs_tag = "", lal_cvs_tag = "", comment = None, ifos = None, inseg = None, outseg = None, nevents = 0, nnodes = 1): """ Append search summary information associated with the given process to the search summary table in xmldoc. Retur...	[ "def", "append_search_summary", "(", "xmldoc", ",", "process", ",", "shared_object", "=", "\"standalone\"", ",", "lalwrapper_cvs_tag", "=", "\"\"", ",", "lal_cvs_tag", "=", "\"\"", ",", "comment", "=", "None", ",", "ifos", "=", "None", ",", "inseg", "=", "No...	37.28	0.044979
def create(sender, recipients=None, cc=None, bcc=None, subject='', message='', html_message='', context=None, scheduled_time=None, headers=None, template=None, priority=None, render_on_delivery=False, commit=True, backend=''): """ Creates an email from supplied keyword arguments...	[ "def", "create", "(", "sender", ",", "recipients", "=", "None", ",", "cc", "=", "None", ",", "bcc", "=", "None", ",", "subject", "=", "''", ",", "message", "=", "''", ",", "html_message", "=", "''", ",", "context", "=", "None", ",", "scheduled_time",...	29.83871	0.000523
def var(names, **args): """ Create symbols and inject them into the global namespace. INPUT: - s -- a string, either a single variable name, or - a space separated list of variable names, or - a list of variable names. This calls :func:`symbols` with the same...	[ "def", "var", "(", "names", ",", "", "", "args", ")", ":", "def", "traverse", "(", "symbols", ",", "frame", ")", ":", "\"\"\"Recursively inject symbols to the global namespace. \"\"\"", "for", "symbol", "in", "symbols", ":", "if", "isinstance", "(", "symbol", ...	27.711864	0.000591
def read_namespaced_job(self, name, namespace, **kwargs): # noqa: E501 """read_namespaced_job # noqa: E501 read the specified Job # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread ...	[ "def", "read_namespaced_job", "(", "self", ",", "name", ",", "namespace", ",", "", "", "kwargs", ")", ":", "# noqa: E501", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async_req'", ")", ":", "return", "s...	53.44	0.001471
def applySettings(self, axisMin=None, axisMax=None, axisLimit=None): """Apply the specified settings to this axis. Set self.minValue, self.minValueSource, self.maxValue, self.maxValueSource, and self.axisLimit reasonably based on the parameters provided. Arguments: axi...	[ "def", "applySettings", "(", "self", ",", "axisMin", "=", "None", ",", "axisMax", "=", "None", ",", "axisLimit", "=", "None", ")", ":", "if", "axisMin", "is", "not", "None", "and", "not", "math", ".", "isnan", "(", "axisMin", ")", ":", "self", ".", ...	39.934783	0.001063
def persist_header_chain(self, headers: Iterable[BlockHeader] ) -> Tuple[Tuple[BlockHeader, ...], Tuple[BlockHeader, ...]]: """ Return two iterable of headers, the first containing the new canonical headers, the second containing the old ...	[ "def", "persist_header_chain", "(", "self", ",", "headers", ":", "Iterable", "[", "BlockHeader", "]", ")", "->", "Tuple", "[", "Tuple", "[", "BlockHeader", ",", "...", "]", ",", "Tuple", "[", "BlockHeader", ",", "...", "]", "]", ":", "with", "self", "....	49.222222	0.013304
def platform_detect(): """Detect if running on the Raspberry Pi or Beaglebone Black and return the platform type. Will return RASPBERRY_PI, BEAGLEBONE_BLACK, or UNKNOWN.""" # Handle Raspberry Pi pi = pi_version() if pi is not None: return RASPBERRY_PI # Handle Beaglebone Black # TO...	[ "def", "platform_detect", "(", ")", ":", "# Handle Raspberry Pi", "pi", "=", "pi_version", "(", ")", "if", "pi", "is", "not", "None", ":", "return", "RASPBERRY_PI", "# Handle Beaglebone Black", "# TODO: Check the Beaglebone Black /proc/cpuinfo value instead of reading", "# ...	36.73913	0.001153
def ips(self): """return all the possible ips of this request, this will include public and private ips""" r = [] names = ['X_FORWARDED_FOR', 'CLIENT_IP', 'X_REAL_IP', 'X_FORWARDED', 'X_CLUSTER_CLIENT_IP', 'FORWARDED_FOR', 'FORWARDED', 'VIA', 'REMOTE_ADDR'] ...	[ "def", "ips", "(", "self", ")", ":", "r", "=", "[", "]", "names", "=", "[", "'X_FORWARDED_FOR'", ",", "'CLIENT_IP'", ",", "'X_REAL_IP'", ",", "'X_FORWARDED'", ",", "'X_CLUSTER_CLIENT_IP'", ",", "'FORWARDED_FOR'", ",", "'FORWARDED'", ",", "'VIA'", ",", "'REMO...	35.294118	0.00974
def image(self): """ Returns a json-schema document that represents a single image entity. """ uri = "/%s/image" % self.uri_base resp, resp_body = self.api.method_get(uri) return resp_body	[ "def", "image", "(", "self", ")", ":", "uri", "=", "\"/%s/image\"", "%", "self", ".", "uri_base", "resp", ",", "resp_body", "=", "self", ".", "api", ".", "method_get", "(", "uri", ")", "return", "resp_body" ]	32.857143	0.008475
def show_relations(self): ''' display every relation in the database as (src, relation, dst) ''' for src_node in self.iter_nodes(): for relation in src_node.outgoing: for dst_node in src_node.outgoing[relation]: print(repr(src_node.obj), '-', relation, '-'...	[ "def", "show_relations", "(", "self", ")", ":", "for", "src_node", "in", "self", ".", "iter_nodes", "(", ")", ":", "for", "relation", "in", "src_node", ".", "outgoing", ":", "for", "dst_node", "in", "src_node", ".", "outgoing", "[", "relation", "]", ":",...	56	0.008798
def inject_extra_args(callback, request, kwargs): '''Inject extra arguments from header, body, form.''' # TODO: this is a temporary pach, should be managed via honouring the # mimetype in the request header.... annots = dict(callback.__annotations__) del annots['return'] for param_name, (param_t...	[ "def", "inject_extra_args", "(", "callback", ",", "request", ",", "kwargs", ")", ":", "# TODO: this is a temporary pach, should be managed via honouring the", "# mimetype in the request header....", "annots", "=", "dict", "(", "callback", ".", "__annotations__", ")", "del", ...	48.368421	0.002134
def _init_metadata(self): """stub""" self._files_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'files'), 'element_label': 'Files', 'instructions': 'ente...	[ "def", "_init_metadata", "(", "self", ")", ":", "self", ".", "_files_metadata", "=", "{", "'element_id'", ":", "Id", "(", "self", ".", "my_osid_object_form", ".", "_authority", ",", "self", ".", "my_osid_object_form", ".", "_namespace", ",", "'files'", ")", ...	36.304348	0.001166
def getRole(self, label): """Get the :class:`rtcclient.models.Role` object by the label name :param label: the label name of the role :return: the :class:`rtcclient.models.Role` object :rtype: :class:`rtcclient.models.Role` """ if not isinstance(label, six.string_types)...	[ "def", "getRole", "(", "self", ",", "label", ")", ":", "if", "not", "isinstance", "(", "label", ",", "six", ".", "string_types", ")", "or", "not", "label", ":", "excp_msg", "=", "\"Please specify a valid role label\"", "self", ".", "log", ".", "error", "("...	38.32	0.002037
def seek(self, offset, whence=os.SEEK_SET): """Seeks to an offset within the file-like object. Args: offset (int): offset to seek to. whence (Optional(int)): value that indicates whether offset is an absolute or relative position within the file. Raises: IOError: if the seek fa...	[ "def", "seek", "(", "self", ",", "offset", ",", "whence", "=", "os", ".", "SEEK_SET", ")", ":", "if", "not", "self", ".", "_is_open", ":", "raise", "IOError", "(", "'Not opened.'", ")", "if", "self", ".", "_fsntfs_data_stream", ":", "self", ".", "_fsnt...	29.368421	0.008681
def plot_cumulative_gain(y_true, y_probas, title='Cumulative Gains Curve', ax=None, figsize=None, title_fontsize="large", text_fontsize="medium"): """Generates the Cumulative Gains Plot from labels and scores/probabilities The cumulative gains chart is used to ...	[ "def", "plot_cumulative_gain", "(", "y_true", ",", "y_probas", ",", "title", "=", "'Cumulative Gains Curve'", ",", "ax", "=", "None", ",", "figsize", "=", "None", ",", "title_fontsize", "=", "\"large\"", ",", "text_fontsize", "=", "\"medium\"", ")", ":", "y_tr...	37.988372	0.000298
def file_put_contents(path, data): """ Put passed contents into file located at 'path' """ with open(path, 'w') as f: f.write(data); f.flush()	[ "def", "file_put_contents", "(", "path", ",", "data", ")", ":", "with", "open", "(", "path", ",", "'w'", ")", "as", "f", ":", "f", ".", "write", "(", "data", ")", "f", ".", "flush", "(", ")" ]	38.75	0.012658
def _submit(self, body, future): """Enqueue a problem for submission to the server. This method is thread safe. """ self._submission_queue.put(self._submit.Message(body, future))	[ "def", "_submit", "(", "self", ",", "body", ",", "future", ")", ":", "self", ".", "_submission_queue", ".", "put", "(", "self", ".", "_submit", ".", "Message", "(", "body", ",", "future", ")", ")" ]	34.333333	0.009479
def wavenumber(src, rec, depth, res, freq, wavenumber, ab=11, aniso=None, epermH=None, epermV=None, mpermH=None, mpermV=None, verb=2): r"""Depreciated. Use `dipole_k` instead.""" # Issue warning mesg = ("\n The use of `model.wavenumber` is deprecated and will " + "be removed;\...	[ "def", "wavenumber", "(", "src", ",", "rec", ",", "depth", ",", "res", ",", "freq", ",", "wavenumber", ",", "ab", "=", "11", ",", "aniso", "=", "None", ",", "epermH", "=", "None", ",", "epermV", "=", "None", ",", "mpermH", "=", "None", ",", "mper...	47.272727	0.001887
def calc_effective_diffusivity(self, inlets=None, outlets=None, domain_area=None, domain_length=None): r""" This calculates the effective diffusivity in this linear transport algorithm. Parameters ---------- inlets : array_like ...	[ "def", "calc_effective_diffusivity", "(", "self", ",", "inlets", "=", "None", ",", "outlets", "=", "None", ",", "domain_area", "=", "None", ",", "domain_length", "=", "None", ")", ":", "return", "self", ".", "_calc_eff_prop", "(", "inlets", "=", "inlets", ...	42.135135	0.001881
def getBaseSpec(cls): """Return the base Spec for TemporalPoolerRegion. Doesn't include the pooler parameters """ spec = dict( description=TemporalPoolerRegion.__doc__, singleNodeOnly=True, inputs=dict( activeCells=dict( description="Active cells", dataType...	[ "def", "getBaseSpec", "(", "cls", ")", ":", "spec", "=", "dict", "(", "description", "=", "TemporalPoolerRegion", ".", "__doc__", ",", "singleNodeOnly", "=", "True", ",", "inputs", "=", "dict", "(", "activeCells", "=", "dict", "(", "description", "=", "\"A...	26.737705	0.001183

def copy_func(dest, src, symlinks=True): """ If symlinks (is true), then a symbolic link will be shallow copied and recreated as a symbolic link; otherwise, copying a symbolic link will be equivalent to copying the symbolic link's final target regardless of symbolic link depth. """ dest = s...

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33.965517

0.000987

def load_qt(api_options): """ Attempt to import Qt, given a preference list of permissible bindings It is safe to call this function multiple times. Parameters ---------- api_options: List of strings The order of APIs to try. Valid items are 'pyside', 'pyqt', and 'pyqtv1' ...

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def attendee_list(request): ''' Returns a list of all attendees. ''' attendees = people.Attendee.objects.select_related( "attendeeprofilebase", "user", ) profiles = AttendeeProfile.objects.filter( attendee__in=attendees ).select_related( "attendee", "attendee__user"...

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def cublasDtrsm(handle, side, uplo, trans, diag, m, n, alpha, A, lda, B, ldb): """ Solve a real triangular system with multiple right-hand sides. """ status = _libcublas.cublasDtrsm_v2(handle, _CUBLAS_SIDE_MODE[side], ...

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def geckoboard_pie_chart(request): """ Shows a pie chart of the metrics in the uids[] GET variable array. """ params = get_gecko_params(request, cumulative=True) from_date = datetime.now()-timedelta(days=params['days_back']) metrics = Metric.objects.filter(uid__in=params['uids']) results =...

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def serializeG1(x, compress=True): """ Converts G1 element @x into an array of bytes. If @compress is True, the point will be compressed resulting in a much shorter string of bytes. """ assertType(x, G1Element) return _serialize(x, compress, librelic.g1_size_bin_abi, librelic.g1_write_b...

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40

0.009174

def get_flagged_args(): """get_flagged_args Collects from the execution statement the arguments provided to this script. The items are then interpretted and returned. The object expected are the KvP's: --os_type - the operating system type to be built --os_version - the operating system version to be buil...

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39.5

0.000618

def fit_glx(self, reject_outliers=3.0, fit_lb=3.6, fit_ub=3.9, fit_func=None): """ Fit a Gaussian function to the Glu/Gln (GLX) peak at 3.75ppm, +/- 0.15ppm [Hurd2004]_. Compare this model to a model that treats the Glx signal as two gaussian peaks. Glx signal a...

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39.416667

0.002063

def hash(self, id): """ Creates a unique filename in the cache for the id. """ h = md5(id).hexdigest() return os.path.join(self.path, h+self.type)

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24.857143

0.011111

def _check_out_arg(func): """Check if ``func`` has an (optional) ``out`` argument. Also verify that the signature of ``func`` has no ``*args`` since they make argument propagation a hassle. Parameters ---------- func : callable Object that should be inspected. Returns ------- ...

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27.183673

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def build(self, ignore=None): '''Calls all necessary methods to build the Lambda Package''' self._prepare_workspace() self.install_dependencies() self.package(ignore)

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38.8

0.010101

def put_event_multi_touch(self, count, contacts, scan_time): """Sends a multi-touch pointer event. The coordinates are expressed in pixels and start from [1,1] which corresponds to the top left corner of the virtual display. The guest may not understan...

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42.085106

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def factorize( self, na_sentinel: int = -1, ) -> Tuple[np.ndarray, ABCExtensionArray]: """ Encode the extension array as an enumerated type. Parameters ---------- na_sentinel : int, default -1 Value to use in the `labels` array to indicate...

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33.843137

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def _compute_global_interested_rts(self): """Computes current global interested RTs for global tables. Computes interested RTs based on current RT filters for peers. This filter should be used to check if for RTs on a path that is installed in any global table (expect RT Table). ...

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47.764706

0.002415

def apply_rectwv_coeff(reduced_image, rectwv_coeff, args_resampling=2, args_ignore_dtu_configuration=True, debugplot=0): """Compute rectification and wavelength calibration coefficients. Parameters ---------- re...

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38.588496

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def compile_file(fullpath, outfile_name, compiler_args): """Calls HamlPy compiler.""" if Options.VERBOSE: print '%s %s -> %s' % (strftime("%H:%M:%S"), fullpath, outfile_name) try: if Options.DEBUG: print "Compiling %s -> %s" % (fullpath, outfile_name) haml_lines = codecs....

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46.933333

0.009749

def write_connection_file(self): """write connection info to JSON file""" if os.path.basename(self.connection_file) == self.connection_file: cf = os.path.join(self.profile_dir.security_dir, self.connection_file) else: cf = self.connection_file write_connection_fil...

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47.272727

0.013208

def demo(context): """Setup a scout demo instance. This instance will be populated with a case, a gene panel and some variants. """ LOG.info("Running scout setup demo") institute_name = context.obj['institute_name'] user_name = context.obj['user_name'] user_mail = context.obj['user_mail']...

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28.7

0.011804

def rlecode_hqx(s): """ Run length encoding for binhex4. The CPython implementation does not do run length encoding of \x90 characters. This implementation does. """ if not s: return '' result = [] prev = s[0] count = 1 # Add a dummy character to get the loop to go one ex...

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29.023256

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def weight_layers(name, bilm_ops, l2_coef=None, use_top_only=False, do_layer_norm=False, reuse=False): """ Weight the layers of a biLM with trainable scalar weights to compute ELMo representations. For each output layer, this returns two ops. The first computes a layer specif...

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37.795455

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def generate_mediation_matrix(dsm): """ Generate the mediation matrix of the given matrix. Rules for mediation matrix generation: Set -1 for items NOT to be considered Set 0 for items which MUST NOT be present Set 1 for items which MUST be present Each module h...

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42.387755

0.00047

def get_request_parameters(self, request_body_type="", method="", authn_method='', request_args=None, http_args=None, **kwargs): """ Builds the request message and constructs the HTTP headers. This is the starting point for a pipelin...

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38.628571

0.001442

def _set_static_ip(name, session, vm_): ''' Set static IP during create() if defined ''' ipv4_cidr = '' ipv4_gw = '' if 'ipv4_gw' in vm_.keys(): log.debug('ipv4_gw is found in keys') ipv4_gw = vm_['ipv4_gw'] if 'ipv4_cidr' in vm_.keys(): log.debug('ipv4_cidr is found ...

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33.285714

0.002088

def _get(self, **kwargs): """Get the resource from a remote Transifex server.""" path = self._construct_path_to_item() return self._http.get(path)

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41.75

0.011765

def merge_checkpoint(input_graph, checkpoint, output_node_names, output_graph, sess): """ Get the variable values from the checkpoint file, and merge them to the GraphDef file Args: input_graph: the GraphDef file, do...

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34.027778

0.001587

def exception(self, timeout=None): """Return a exception raised by the call that the future represents. :param timeout: The number of seconds to wait for the exception if the future has not been completed. None, the default, sets no limit. :returns: The exception ...

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38.192308

0.001965

def set_direct(self, address_value_dict): """Called in the context manager's set method to either overwrite the value for an address, or create a new future and immediately set a value in the future. Args: address_value_dict (dict of str:bytes): The unique full addresses ...

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37.681818

0.002353

def main(): """ The main function of the Andes command-line tool. This function executes the following workflow: * Parse the command line inputs * Show the tool preamble * Output the requested helps, edit/save configs or remove outputs. Exit the main program if any of the above is ex...

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29.027778

0.000925

def trans_coeff(eq, x, y, z): """This function is provided by MOKA2 Development Team (1996.xx.xx) and used in SOSS system.""" tt = (eq - 2000.0) / 100.0 zeta = 2306.2181 * tt + 0.30188 * tt * tt + 0.017998 * tt * tt * tt zetto = 2306.2181 * tt + 1.09468 * tt * tt + 0.018203 * tt * tt * tt theta...

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42.071429

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def get_bios_settings(irmc_info): """Get the current BIOS settings on the server :param irmc_info: node info. :returns: a list of dictionary BIOS settings """ bios_config = backup_bios_config(irmc_info)['bios_config'] bios_config_data = bios_config['Server']['SystemConfig']['BiosConfig'] s...

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40.263158

0.001277

def _load_commands(root): """Returns {name: Command}""" def proto_text(t): if t.tag == 'name': return '{name}' elif t.tag == 'ptype': return '{type}' out = [] if t.text: out.append(_escape_tpl_str(t.text)) for x in t: out.ap...

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37

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def read_feather(path, columns=None, use_threads=True): """ Load a feather-format object from the file path .. versionadded 0.20.0 Parameters ---------- path : string file path, or file-like object columns : sequence, default None If not provided, all columns are read .. v...

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28.525

0.000847

def get_as_map_with_default(self, key, default_value): """ Converts map element into an AnyValueMap or returns default value if conversion is not possible. :param key: a key of element to get. :param default_value: the default value :return: AnyValueMap value of the element or...

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40.25

0.008097

def multi_bulk(self, args): '''Multi bulk encoding for list/tuple ``args`` ''' return null_array if args is None else b''.join(self._pack(args))

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41.25

0.011905

def get_koji_module_build(session, module_spec): """ Get build information from Koji for a module. The module specification must include at least name, stream and version. For legacy support, you can omit context if there is only one build of the specified NAME:STREAM:VERSION. :param session: KojiS...

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45.944444

0.001579

def throw(self, type, value=None, traceback=None): # pylint: disable=redefined-builtin """Raise an exception in this element""" return self.__wrapped__.throw(type, value, traceback)

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65.333333

0.015152

def get_mean_DEV(sum_ptrm_checks, sum_abs_ptrm_checks, n_pTRM, delta_x_prime): """ input: sum_ptrm_checks, sum_abs_ptrm_checks, n_pTRM, delta_x_prime output: Mean deviation of a pTRM check """ if not n_pTRM: return float('nan'), float('nan') mean_DEV = ((old_div(1., n_pTRM)) * (old_div(s...

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48.3

0.00813

def df2chucks(din,chunksize,outd,fn,return_fmt='\t',force=False): """ :param return_fmt: '\t': tab-sep file, lly, '.', 'list': returns a list """ from os.path import exists#,splitext,dirname,splitext,basename,realpath from os import makedirs din.index=range(0,len(din),1) chunkrange=list(np....

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def add_management_certificate(self, public_key, thumbprint, data): ''' The Add Management Certificate operation adds a certificate to the list of management certificates. Management certificates, which are also known as subscription certificates, authenticate clients attempting ...

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44.956522

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def make_muc_userinfo(self): """ Create <x xmlns="...muc#user"/> element in the stanza. :return: the element created. :returntype: `MucUserX` """ self.clear_muc_child() self.muc_child=MucUserX(parent=self.xmlnode) return self.muc_child

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29.1

0.01

def coastal_coords(): """ A coastal coord is a 2-tuple: (tile id, direction). An edge is coastal if it is on the grid's border. :return: list( (tile_id, direction) ) """ coast = list() for tile_id in coastal_tile_ids(): tile_coord = tile_id_to_coord(tile_id) for edge_coord ...

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33.705882

0.001698

def enable() -> None: """Patch ``sys.stdout`` to use ``DebugPrint``.""" if not isinstance(sys.stdout, DebugPrint): sys.stdout = DebugPrint(sys.stdout)

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43.75

0.011236

def legendre_lm(l, m, z, normalization='4pi', csphase=1, cnorm=0): """ Compute the associated Legendre function for a specific degree and order. Usage ----- plm = legendre_lm (l, m, z, [normalization, csphase, cnorm]) Returns ------- plm : float The associated Legendre function...

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39.661017

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def check_messages(filename, report_empty=False): """ Checks messages in `filename` in various ways: * Translations must have the same slots as the English. * Messages can't have astral characters in them. If `report_empty` is True, will also report empty translation strings. Returns the pro...

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36.032258

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def getnodes(self, name): "Return the direct subnodes with name 'name'" for node in self.nodes: if striptag(node.tag) == name: yield node

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35.4

0.01105

def split(url): """Split URL into scheme, netloc, path, query and fragment. >>> split('http://www.example.com/abc?x=1&y=2#foo') SplitResult(scheme='http', netloc='www.example.com', path='/abc', query='x=1&y=2', fragment='foo') """ scheme = netloc = path = query = fragment = '' ip6_start = url.f...

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30.5

0.001095

def realimag_files(xscript=0, yscript="d[1]+1j*d[2]", eyscript=None, exscript=None, paths=None, g=None, **kwargs): """ This will load a bunch of data files, generate data based on the supplied scripts, and then plot the ydata's real and imaginary parts versus xdata. Parameters ---------- xscrip...

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35.37931

0.009488

def EndVector(self, vectorNumElems): """EndVector writes data necessary to finish vector construction.""" self.assertNested() ## @cond FLATBUFFERS_INTERNAL self.nested = False ## @endcond # we already made space for this, so write without PrependUint32 self.Place...

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36.4

0.010724

def f_supports(self, data): """ Simply checks if data is supported """ if isinstance(data, Quantity): return True elif super(Brian2Parameter, self).f_supports(data): return True return False

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34.285714

0.00813

def read_header(filename, return_idxs=False): """ Read blimpy header and return a Python dictionary of key:value pairs Args: filename (str): name of file to open Optional args: return_idxs (bool): Default False. If true, returns the file offset indexes for value...

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26.486486

0.001969

def f2p_list(phrase, max_word_size=15, cutoff=3): """Convert a phrase from Finglish to Persian. phrase: The phrase to convert. max_word_size: Maximum size of the words to consider. Words larger than this will be kept unchanged. cutoff: The cut-off point. For each word, there could be many pos...

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29.758621

0.001122

def tokenise(cls, route): ''' Split a string into an iterator of (type, value) tokens. ''' match = None for match in cls.syntax.finditer(route): pre, name, rex = match.groups() if pre: yield ('TXT', pre.replace('\\:',':')) if rex and name: yield ('VAR', (rex, ...

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45.615385

0.014876

def parse_config(file_name='/usr/local/etc/pkg.conf'): ''' Return dict of uncommented global variables. CLI Example: .. code-block:: bash salt '*' pkg.parse_config ``NOTE:`` not working properly right now ''' ret = {} if not os.path.isfile(file_name): return 'Unable t...

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27.269231

0.001362

def kpath_from_seekpath(cls, seekpath, point_coords): r"""Convert seekpath-formatted kpoints path to sumo-preferred format. If 'GAMMA' is used as a label this will be replaced by '\Gamma'. Args: seekpath (list): A :obj:`list` of 2-tuples containing the labels at eac...

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37.816327

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def adjustSize( self ): """ Adjusts the size of this node to support the length of its contents. """ cell = self.scene().cellWidth() * 2 minheight = cell minwidth = 2 * cell # fit to the grid size metrics = QFontMetrics(QApplication.font()) ...

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29.361111

0.015568

def files_in_directory(db, user_id, db_dirname): """ Return files in a directory. """ fields = _file_default_fields() rows = db.execute( select( fields, ).where( _is_in_directory(files, user_id, db_dirname), ).order_by( files.c.user_id, ...

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27.45

0.001761

def get( self, key: str, default: typing.Any = UNSET, type_: typing.Type[typing.Any] = str, subtype: typing.Type[typing.Any] = str, mapper: typing.Optional[typing.Callable[[object], object]] = None, ) -> typing.Any: """ Parse a value from an environmen...

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29.017544

0.001754

def get_active_entry(user, select_for_update=False): """Returns the user's currently-active entry, or None.""" entries = apps.get_model('entries', 'Entry').no_join if select_for_update: entries = entries.select_for_update() entries = entries.filter(user=user, end_time__isnull=True) if not e...

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38.583333

0.00211

def remount(name, device, mkmnt=False, fstype='', opts='defaults', user=None): ''' Attempt to remount a device, if the device is not already mounted, mount is called CLI Example: .. code-block:: bash salt '*' mount.remount /mnt/foo /dev/sdz1 True ''' force_mount = False if __g...

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35.839286

0.001455

def fastp_filtered_reads_chart(self): """ Function to generate the fastp filtered reads bar plot """ # Specify the order of the different possible categories keys = OrderedDict() keys['filtering_result_passed_filter_reads'] = { 'name': 'Passed Filter' } keys['filtering_result_lo...

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47.277778

0.019585

def listDatasetChildren(self, dataset): """ takes required dataset parameter returns only children dataset name """ if( dataset == "" ): dbsExceptionHandler("dbsException-invalid-input", "DBSDataset/listDatasetChildren. Parent Dataset name is required.") conn ...

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35.857143

0.009709

def update_file(self, path): ''' Updates the file watcher and calls the appropriate method for results @return: False if we need to keep trying the connection ''' try: # grab the file result, stat = self.zoo_client.get(path, watch=self.watch_file) ...

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35.606061

0.001657

def _speak_normal(self, element): """ Speak the content of element only. :param element: The element. :type element: hatemile.util.html.htmldomelement.HTMLDOMElement """ if element.has_attribute(AccessibleCSSImplementation.DATA_SPEAK): if ( (...

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35.958333

0.002257

def to_filename(data, mask=DEFAULT_PAPERS_FILENAME_MASK, extra_formatters=None): """ Convert a bibtex entry to a formatted filename according to a given mask. .. note :: Available formatters out of the box are: - ``journal`` - ``title`` ...

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32.258065

0.000485

def validate_wrap(self, value): ''' Check that ``value`` is valid for unwrapping with ``ComputedField.computed_type``''' try: self.computed_type.validate_wrap(value) except BadValueException as bve: self._fail_validation(value, 'Bad value for computed field', cause=bve)

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52.166667

0.012579

def gen_binary(table, output, ascii_props=False, append=False, prefix=""): """Generate binary properties.""" categories = [] binary_props = ( ('DerivedCoreProperties.txt', None), ('PropList.txt', None), ('DerivedNormalizationProps.txt', ('Changes_When_NFKC_Casefolded', 'Full_Composi...

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36.551724

0.002143

def export_process_element(definitions, process_id, process_attributes_dictionary): """ Creates process element for exported BPMN XML file. :param process_id: string object. ID of exported process element, :param definitions: an XML element ('definitions'), root element of BPMN 2.0 docu...

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57.875

0.008502

def create_token(user, client, scope, id_token_dic=None): """ Create and populate a Token object. Return a Token object. """ token = Token() token.user = user token.client = client token.access_token = uuid.uuid4().hex if id_token_dic is not None: token.id_token = id_token_d...

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25.894737

0.001961

def arrows(self): """Iterate over all my arrows.""" for o in self.arrow.values(): for arro in o.values(): yield arro

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31.2

0.0125

def parseBEDString(line, scoreType=int, dropAfter=None): """ Parse a string in BED format and return a GenomicInterval object. :param line: the string to be parsed :param dropAfter: an int indicating that any fields after and including this field should be ignored as they don't conform to ...

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33.823529

0.01268

def _get_var_decl_init_value(self, _ctype, children): """ Gathers initialisation values by parsing children nodes of a VAR_DECL. """ # FIXME TU for INIT_LIST_EXPR # FIXME: always return [(child.kind,child.value),...] # FIXME: simplify this redondant code. init_va...

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39.208333

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def makepilimage(self, scale = "log", negative = False): """ Makes a PIL image out of the array, respecting the z1 and z2 cutoffs. By default we use a log scaling identical to iraf's, and produce an image of mode "L", i.e. grayscale. But some drawings or colourscales will change the mode...

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def _chunk_putter(self, uri, open_file, headers=None): """Make many PUT request for a single chunked object. Objects that are processed by this method have a SHA256 hash appended to the name as well as a count for object indexing which starts at 0. To make a PUT request pass, ``url`` ...

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def push_tx(self, crypto, tx_hex): """ This method is untested. """ url = "%s/pushtx" % self.base_url return self.post_url(url, {'hex': tx_hex}).content

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def process(self, element): """Run batch prediciton on a TF graph. Args: element: list of strings, representing one batch input to the TF graph. """ import collections import apache_beam as beam num_in_batch = 0 try: assert self._session is not None feed_dict = collectio...

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def _get_content(self, params, mode_translate): """ This method gets the token and makes the header variable that will be used in connection authentication. After that, calls the _make_request() method to return the desired data. """ token = self._get_...

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def _send_commit_request(self, retry_delay=None, attempt=None): """Send a commit request with our last_processed_offset""" # If there's a _commit_call, and it's not active, clear it, it probably # just called us... if self._commit_call and not self._commit_call.active(): self...

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def get_offset(name): """ Return DateOffset object associated with rule name Examples -------- get_offset('EOM') --> BMonthEnd(1) """ if name not in libfreqs._dont_uppercase: name = name.upper() name = libfreqs._lite_rule_alias.get(name, name) name = libfreqs._lite_r...

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def remove_user(name, profile='github'): ''' Remove a Github user by name. name The user for which to obtain information. profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. code-block:: bash salt myminion github.remove_user ...

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def unix_timestamp_to_datetime(unix_timestamp): """ <Purpose> Convert 'unix_timestamp' (i.e., POSIX time, in UNIX_TIMESTAMP_SCHEMA format) to a datetime.datetime() object. 'unix_timestamp' is the number of seconds since the epoch (January 1, 1970.) >>> datetime_object = unix_timestamp_to_datetime(...

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def append_search_summary(xmldoc, process, shared_object = "standalone", lalwrapper_cvs_tag = "", lal_cvs_tag = "", comment = None, ifos = None, inseg = None, outseg = None, nevents = 0, nnodes = 1): """ Append search summary information associated with the given process to the search summary table in xmldoc. Retur...

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def create(sender, recipients=None, cc=None, bcc=None, subject='', message='', html_message='', context=None, scheduled_time=None, headers=None, template=None, priority=None, render_on_delivery=False, commit=True, backend=''): """ Creates an email from supplied keyword arguments...

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def var(names, **args): """ Create symbols and inject them into the global namespace. INPUT: - s -- a string, either a single variable name, or - a space separated list of variable names, or - a list of variable names. This calls :func:`symbols` with the same...

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def read_namespaced_job(self, name, namespace, **kwargs): # noqa: E501 """read_namespaced_job # noqa: E501 read the specified Job # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread ...

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def applySettings(self, axisMin=None, axisMax=None, axisLimit=None): """Apply the specified settings to this axis. Set self.minValue, self.minValueSource, self.maxValue, self.maxValueSource, and self.axisLimit reasonably based on the parameters provided. Arguments: axi...

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def persist_header_chain(self, headers: Iterable[BlockHeader] ) -> Tuple[Tuple[BlockHeader, ...], Tuple[BlockHeader, ...]]: """ Return two iterable of headers, the first containing the new canonical headers, the second containing the old ...

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def platform_detect(): """Detect if running on the Raspberry Pi or Beaglebone Black and return the platform type. Will return RASPBERRY_PI, BEAGLEBONE_BLACK, or UNKNOWN.""" # Handle Raspberry Pi pi = pi_version() if pi is not None: return RASPBERRY_PI # Handle Beaglebone Black # TO...

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def ips(self): """return all the possible ips of this request, this will include public and private ips""" r = [] names = ['X_FORWARDED_FOR', 'CLIENT_IP', 'X_REAL_IP', 'X_FORWARDED', 'X_CLUSTER_CLIENT_IP', 'FORWARDED_FOR', 'FORWARDED', 'VIA', 'REMOTE_ADDR'] ...

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def image(self): """ Returns a json-schema document that represents a single image entity. """ uri = "/%s/image" % self.uri_base resp, resp_body = self.api.method_get(uri) return resp_body

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def show_relations(self): ''' display every relation in the database as (src, relation, dst) ''' for src_node in self.iter_nodes(): for relation in src_node.outgoing: for dst_node in src_node.outgoing[relation]: print(repr(src_node.obj), '-', relation, '-'...

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def inject_extra_args(callback, request, kwargs): '''Inject extra arguments from header, body, form.''' # TODO: this is a temporary pach, should be managed via honouring the # mimetype in the request header.... annots = dict(callback.__annotations__) del annots['return'] for param_name, (param_t...

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def _init_metadata(self): """stub""" self._files_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'files'), 'element_label': 'Files', 'instructions': 'ente...

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def getRole(self, label): """Get the :class:`rtcclient.models.Role` object by the label name :param label: the label name of the role :return: the :class:`rtcclient.models.Role` object :rtype: :class:`rtcclient.models.Role` """ if not isinstance(label, six.string_types)...

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def seek(self, offset, whence=os.SEEK_SET): """Seeks to an offset within the file-like object. Args: offset (int): offset to seek to. whence (Optional(int)): value that indicates whether offset is an absolute or relative position within the file. Raises: IOError: if the seek fa...

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def plot_cumulative_gain(y_true, y_probas, title='Cumulative Gains Curve', ax=None, figsize=None, title_fontsize="large", text_fontsize="medium"): """Generates the Cumulative Gains Plot from labels and scores/probabilities The cumulative gains chart is used to ...

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def file_put_contents(path, data): """ Put passed contents into file located at 'path' """ with open(path, 'w') as f: f.write(data); f.flush()

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def _submit(self, body, future): """Enqueue a problem for submission to the server. This method is thread safe. """ self._submission_queue.put(self._submit.Message(body, future))

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def wavenumber(src, rec, depth, res, freq, wavenumber, ab=11, aniso=None, epermH=None, epermV=None, mpermH=None, mpermV=None, verb=2): r"""Depreciated. Use `dipole_k` instead.""" # Issue warning mesg = ("\n The use of `model.wavenumber` is deprecated and will " + "be removed;\...

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def calc_effective_diffusivity(self, inlets=None, outlets=None, domain_area=None, domain_length=None): r""" This calculates the effective diffusivity in this linear transport algorithm. Parameters ---------- inlets : array_like ...

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def getBaseSpec(cls): """Return the base Spec for TemporalPoolerRegion. Doesn't include the pooler parameters """ spec = dict( description=TemporalPoolerRegion.__doc__, singleNodeOnly=True, inputs=dict( activeCells=dict( description="Active cells", dataType...

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