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=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2019] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obta...
muffato/ensembl
modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblTranscriptGeneric.pm
Perl
apache-2.0
8,532
#!/usr/bin/perl package RVM v1.0.0; use v5.14; # Pragmas use strict; use warnings; # Função que avalia se um escalar e um número, ou não. use Scalar::Util qw(looks_like_number); # Pacote com implementações das funções de assembly. use functions; sub ctrl { ## VARIÁVEIS ########################################...
renatocf/MAC0242-PROJECT
lib/RVM/ctrl.pm
Perl
apache-2.0
2,098
package API::Asn; # # Copyright 2015 Comcast Cable Communications Management, LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless...
mtorluemke/traffic_control
traffic_ops/app/lib/API/Asn.pm
Perl
apache-2.0
2,312
#!/usr/bin/env perl use strict; my $family_type = shift @ARGV; my $dir = $ENV{'EST_PRECOMPUTE_SCRIPTS'}; die "Input pfam/gene3d/ssf unless " unless defined $family_type; die "Load EST Module\n" unless defined $dir; my @bins = split "\n", `ls $dir/lists/$family_type/blast/ | sort -n`; my @todo; my @results; my %hash; ...
EnzymeFunctionInitiative/est-precompute-bw
4-blast_check.pl
Perl
apache-2.0
1,145
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
network/ruggedcom/mode/components/psu.pm
Perl
apache-2.0
2,732
############################################################ # # $Id$ # Sys::Filesystem - Retrieve list of filesystems and their properties # # Copyright 2004,2005,2006 Nicola Worthington # Copyright 2009 Jens Rehsack # # Licensed under the Apache License, Version 2.0 (the "License"); # you may no...
gitpan/Sys-Filesystem
lib/Sys/Filesystem/Unix.pm
Perl
apache-2.0
9,700
#!/usr/bin/perl # Mingyu @ May 9 2013 # Summarize the results of 5_1_batch.pl use strict; use File::Path qw(make_path); use Math::NumberCruncher; #my @dTypes = ("NPNV", "NANWNO", "NPNVNONANW", "NP2DNV2D", "NP2DNV2DNONANW"); my @dTypes = ("NPNV"); unless (-d "results") { make_path "results"; } foreach my $voc ("1k", ...
mingyu623/6DMG
6DMG_htk/words_letter_based/5_2_stats_ext_bigram_nbest.pl
Perl
bsd-2-clause
1,814
package Twitter::Authentication; =head1 NAME Twitter::Authentication - Basic functions for Twitter authentication. =head1 SYNOPSIS use Twitter::Authentication; my $credentials = Twitter::Authentication::credentials(); my $login_data = Twitter::Authentication::login_struct(); my $parsed_xml...
gitpan/Twitter
lib/Twitter/Authentication.pm
Perl
bsd-3-clause
2,720
#!/usr/bin/perl -w my $sleep_duration = 5; warn "starting...\n"; warn "sleeping $sleep_duration seconds...\n"; sleep $sleep_duration; my $a = $ARGV[0]; my $b = $ARGV[1]; warn "calculating $a/$b...\n"; my $c=$a/$b; print "$c\n"; warn "done!\n"; exit 0;
cparnot/GridStuffer
Demo/Demo5/demo5.pl
Perl
bsd-3-clause
259
#!/usr/bin/perl # # # $rdir = $ARGV[0]; $exe = $ARGV[1]; $bdir = $ENV{'BIN_ROOT_DIR'}; $cmd ="${rdir}/runinitmem ${bdir}/test/${exe}"; print <<EOF *** Tst: $__FILE__ Cmd: $cmd *** EOF ; system($cmd); $stat = $? >> 8; if ($stat != 0) { print "*** test failed ;-( ***\n"; exit(1); } print "*** test pass...
MoserMichael/cstuff
preloadut/initmem/test/initmemtest.pl
Perl
bsd-3-clause
336
:- module(m3,[ ]). :- use_module(m1). data(m3).
TeamSPoon/logicmoo_base
prolog/logicmoo/pdt_server/PDT Examples/transparent/m3.pl
Perl
mit
50
/* Part of XPCE --- The SWI-Prolog GUI toolkit Author: Jan Wielemaker and Anjo Anjewierden E-mail: jan@swi.psy.uva.nl WWW: http://www.swi.psy.uva.nl/projects/xpce/ Copyright (c) 1997-2011, University of Amsterdam All rights reserved. Redistribution and use in source a...
TeamSPoon/logicmoo_workspace
docker/rootfs/usr/local/lib/swipl/xpce/prolog/lib/help_message.pl
Perl
mit
6,938
########################################################################### # # This file is partially auto-generated by the DateTime::Locale generator # tools (v0.10). This code generator comes with the DateTime::Locale # distribution in the tools/ directory, and is called generate-modules. # # This file was generated...
jkb78/extrajnm
local/lib/perl5/DateTime/Locale/is_IS.pod
Perl
mit
10,010
#!/usr/bin/perl -w $m_port = 0; # master port $s_port = 0; # slave port $compare_flag = 0; sub print_usage { print "Usage) perl ./run_all_repl_test.pl master_port slave_port [compare]\n"; } if ($#ARGV >= 1 && $#ARGV <= 2) { $m_port = $ARGV[0]; $s_port = $ARGV[1]; if ($#ARGV == 2) { if ($ARGV[2] eq 'co...
jam2in/arcus-misc
acp-java/run_some_repl_test_v2.pl
Perl
apache-2.0
3,214
package Google::Ads::AdWords::v201406::AuthenticationError::Reason; use strict; use warnings; sub get_xmlns { 'https://adwords.google.com/api/adwords/cm/v201406'}; # derivation by restriction use base qw( SOAP::WSDL::XSD::Typelib::Builtin::string); 1; __END__ =pod =head1 NAME =head1 DESCRIPTION Perl dat...
gitpan/GOOGLE-ADWORDS-PERL-CLIENT
lib/Google/Ads/AdWords/v201406/AuthenticationError/Reason.pm
Perl
apache-2.0
1,141
#!/usr/bin/perl -w use strict; use CoGeX; use CoGe::Accessory::Web; use Data::Dumper; use Getopt::Long; use File::Path; use vars qw($DEBUG $GO $conf_file $coge $gid $restricted $P $ftid $user $pwd); GetOptions ( "debug=s" => \$DEBUG, "go=s" => \$GO, "conf_file|cf=s" => \$conf_file, ...
LyonsLab/coge
scripts/old/delete_features.pl
Perl
bsd-2-clause
1,382
# # Copyright 2017 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
Shini31/centreon-plugins
apps/apcupsd/local/mode/linevoltage.pm
Perl
apache-2.0
5,310
# Call.pm # # Copyright (c) 1995-2011 Paul Marquess. All rights reserved. # # This program is free software; you can redistribute it and/or # modify it under the same terms as Perl itself. package Filter::Util::Call ; require 5.005 ; require DynaLoader; require Exporter; use Carp ; use strict; use warnings; use var...
leighpauls/k2cro4
third_party/perl/perl/lib/Filter/Util/Call.pm
Perl
bsd-3-clause
12,800
#!/usr/bin/perl -w # Copyright (C) 2004 by Steve Litt # Licensed with the GNU General Public License, Version 2 # ABSOLUTELY NO WARRANTY, USE AT YOUR OWN RISK # See http://www.gnu.org/licenses/gpl.txt use strict; # prevent hard to find errors use Node; # Use Node.pm tool ############################################...
jleivaizq/dotfiles
vim/vim.symlink/bundle/vimoutliner/vimoutliner/scripts/Node/example_parse.pl
Perl
mit
4,136
package DDG::Goodie::IsAwesome::rp4; # ABSTRACT: rp4's first Goodie use DDG::Goodie; use strict; zci answer_type => "is_awesome_rp4"; zci is_cached => 1; triggers start => "duckduckhack rp4"; handle remainder => sub { return if $_; return "rp4 is awesome and has successfully completed the DuckDuckHack Goo...
viluon/zeroclickinfo-goodies
lib/DDG/Goodie/IsAwesome/rp4.pm
Perl
apache-2.0
343
# !!!!!!! DO NOT EDIT THIS FILE !!!!!!! # This file is machine-generated by mktables from the Unicode # database, Version 6.1.0. Any changes made here will be lost! # !!!!!!! INTERNAL PERL USE ONLY !!!!!!! # This file is for internal use by core Perl only. The format and even the # name or existence of this ...
Dokaponteam/ITF_Project
xampp/perl/lib/unicore/lib/Sc/Buhd.pl
Perl
mit
421
#!/usr/bin/perl use CGI qw/ :standard /; use File::Temp qw/ tempfile tempdir /; # my $spellercss = '/speller/spellerStyle.css'; # by FredCK my $spellercss = '../spellerStyle.css'; # by FredCK # my $wordWindowSrc = '/speller/wordWindow.js'; # by FredCK my $wordWindowSrc = '../wordWindow.js'; # by F...
walterfan/pims4php
util/fckeditor/editor/dialog/fck_spellerpages/spellerpages/server-scripts/spellchecker.pl
Perl
apache-2.0
4,662
#!/usr/bin/perl # # Example from Etienne Lawlor at https://groups.google.com/forum/#!msg/yelp-developer-support/Bm4WQET5ios/_x2KiQqK9QMJ # use LWP::UserAgent; use Net::OAuth; $Net::OAuth::PROTOCOL_VERSION = Net::OAuth::PROTOCOL_VERSION_1_0; use HTTP::Request::Common; my $ua = LWP::UserAgent->new; sub consumer_key { ...
jsuns/yelp-api
v2/perl/search.pl
Perl
mit
1,363
#!/usr/bin/perl -w use warnings; use strict; package loadconf; use Cwd qw(realpath); use File::Basename; my $fullpath = dirname(realpath($0)); # my $config = "/mnt/d/sys/debian/bio/config"; # my $setup = "/mnt/d/sys/debian/bio/setup"; my $print = 1; my $config = "$fullpath/config"; &loadConf; ################...
sauloal/perlscripts
bioMail/loadconf.pm
Perl
mit
1,435
package ivent::DB::Schema; use strict; use warnings; use utf8; use Teng::Schema::Declare; base_row_class 'ivent::DB::Row'; table { name 'events'; pk 'id'; columns qw(id name started_at ended_at url capacity accepted wating location description); }; table { name 'events_tags'; pk 'id'; column...
mihyaeru21/ivent
lib/ivent/DB/Schema.pm
Perl
mit
420
package O2CMS::Obj::Template::Object; # Description: Template for displaying an object. One template may be used for several classes. use strict; use base 'O2CMS::Obj::Template'; use O2 qw($context); use O2::Util::List qw(upush contains); #----------------------------------------------------------------------------...
haakonsk/O2-CMS
lib/O2CMS/Obj/Template/Object.pm
Perl
mit
1,250
#!/usr/bin/perl use strict; use warnings; my $source_server = $ARGV[0]; my $help = <<EHELP usage: sudo perl $0 source_server desc: this script will copy users from one Linux system to another. params: source_server: the address of the server to copy users from EHELP ; if(!defined($source_server)) { print "sou...
f0rk/scripts
migrate_all_users.pl
Perl
mit
1,412
package App::Docker::Client::Socket; =head1 NAME App::Docker::Client - Simple and plain Docker client! =head1 VERSION Version 0.010300 =cut our $VERSION = '0.010300'; use 5.16.0; use strict; use warnings; use AnyEvent; use AnyEvent::Socket 'tcp_connect'; use AnyEvent::HTTP; use LWP::UserAgent; use JSON; use LWP:...
mziescha/App-Docker-Client
lib/App/Docker/Client/Socket.pm
Perl
mit
5,919
#!C:\strawberry\perl\bin\perl.exe # Match and capture word that ends with letter 'a' and the up to five next # characters; display contents of both captures; use named captures use 5.020; use warnings; while (<>) { # take one input line at a time chomp; if (/\b(?<name>\w*a)\b(?<nextchar>.{0,5})/) { ...
bewuethr/ctci
llama_book/chapter08/chapter08_ex05.pl
Perl
mit
522
#!/usr/bin/perl use strict; use warnings; use Data::Dumper; my $dir = shift; die "Please provide a directory name to check\n" unless $dir; chdir $dir or die "Failed to enter the specified directory '$dir': $!\n"; if ( ! open(GIT_LS,'-|','git ls-files') ) { die "Failed to process 'git ls-files': $!\n"; ...
KnightHawk3/packr
sloc.pl
Perl
mit
4,351
%% Extension designed to fetch news and download updates from swi-prolog.org :- module(news, [ news/1 ,news_abort/0 ]). :- use_module(dispatch). :- use_module(info). :- use_module(config). :- use_module(submodules/html). :- use_module(submodules/web). :- use_module(submodules/utils). :- use_module(librar...
logicmoo/yesbot
extensions/news.pl
Perl
mit
11,597
#!/usr/bin/env perl #*************************************************************************** # _ _ ____ _ # Project ___| | | | _ \| | # / __| | | | |_) | | # | (__| |_| | _ <| |___ # ...
FlashYoshi/YoutubePlaylistDownloader
curl-7.28.1/curl-7.28.1/tests/ftpserver.pl
Perl
mit
62,364
# Copyright 2020, Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
googleads/google-ads-perl
lib/Google/Ads/GoogleAds/V8/Services/KeywordPlanService/GenerateHistoricalMetricsRequest.pm
Perl
apache-2.0
1,208
=head1 LICENSE # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016-2017] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # ...
james-monkeyshines/ensembl-analysis
modules/Bio/EnsEMBL/Analysis/RunnableDB/CopyGenes.pm
Perl
apache-2.0
4,431
#! /usr/local/bin/perl use IO::Socket; use DBI; use Authen::Libwrap qw( hosts_ctl STRING_UNKNOWN); use Net::FTP; ## auth flush $|++; require "/export/home/rmail/bin/config.pl"; $remote_ip=$ENV{'TCPREMOTEIP'}; $local_host= `hostname`; chomp($local_host); if (!hosts_ctl("db_api", $local_host, $remote_ip)) { print S...
TonyChengTW/PerlTools
db_api.pl
Perl
apache-2.0
15,659
use strict; use warnings; package KinoSearch::Test::TestUtils; use base qw( Exporter ); our @EXPORT_OK = qw( working_dir create_working_dir remove_working_dir create_index create_uscon_index test_index_loc persistent_test_index_loc init_test_index_loc get_uscon_docs utf8_test_s...
gitpan/KinoSearch
buildlib/KinoSearch/Test/TestUtils.pm
Perl
apache-2.0
6,829
# # Author:: Adam Jacob (<adam@opscode.com>) # Copyright:: Copyright (c) 2008 Adam Jacob # License:: Apache License, Version 2.0 # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http:...
adamhjk/sid
lib/Sid/Service/Controller/Agent.pm
Perl
apache-2.0
3,320
# Copyright 2020, Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
googleads/google-ads-perl
lib/Google/Ads/GoogleAds/V8/Enums/OptimizationGoalTypeEnum.pm
Perl
apache-2.0
869
# # Copyright 2018 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
wilfriedcomte/centreon-plugins
hardware/server/dell/idrac/snmp/mode/components/coolingunit.pm
Perl
apache-2.0
3,493
=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2022] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obta...
Ensembl/ensembl-analysis
modules/Bio/EnsEMBL/Analysis/Hive/Config/HiveGeneBuilding/Hive_exonerate_protein_file_conf.pm
Perl
apache-2.0
15,525
# # Copyright 2018 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
wilfriedcomte/centreon-plugins
network/digi/sarian/snmp/mode/gprs.pm
Perl
apache-2.0
8,847
package Paws::CloudSearchDomain::Hits; use Moose; has Cursor => (is => 'ro', isa => 'Str', request_name => 'cursor', traits => ['NameInRequest']); has Found => (is => 'ro', isa => 'Int', request_name => 'found', traits => ['NameInRequest']); has Hit => (is => 'ro', isa => 'ArrayRef[Paws::CloudSearchDomain::Hit]...
ioanrogers/aws-sdk-perl
auto-lib/Paws/CloudSearchDomain/Hits.pm
Perl
apache-2.0
2,016
package Poller; use strict; use LWP::Simple qw(RC_OK RC_NOT_MODIFIED); sub new { my $proto = shift; my $class = ref($proto) || $proto; my $self = {}; %{$self->{params}} = @_; bless ($self, $class); return $self; } sub name { my $self = shift; ($self =~ m/Poller::(.*?)=/)[0]; } sub data_file { my $s...
abh/pgeodns
poller/perl/Poller.pm
Perl
apache-2.0
920
#!/usr/bin/env perl # Integration tests for build command line tool #*************************************************************************** # Copyright 2014-2017, mettatw <mettatw@users.noreply.github.com> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in ...
mettatw/ubiquitous-octo-spork
test/int-shellframe.pl
Perl
apache-2.0
4,439
package Mojo::Webqq::Plugin::GroupManage; use strict; use List::Util qw(first); our $PRIORITY = 100; use POSIX (); sub do_speak_limit{ my($client,$data,$speak_counter,$msg) = @_; $data->{is_new_group_notice} //= 1; $data->{is_new_group_member_notice} //= 1; $data->{is_lose_group_member_notice} //= 1; ...
sjdy521/Mojo-Webqq
lib/Mojo/Webqq/Plugin/GroupManage.pm
Perl
bsd-2-clause
8,307
#!/usr/bin/perl use strict; if( @ARGV < 1 ){ print "Need 1 Input: <directory_of_cloud_user_logs>\n"; exit(1); }; my $data_dir = shift @ARGV; my $data_name = "actual_cloud_display.log"; my $new_data_name = "accumul_actual_cloud_display.log"; my $input_file = $data_dir . "/" . $data_name; open(DATA,...
eucalyptus/euca-monkey
cloud_user_workload_generator/plot_cloud_user_data/create_accumul_actual_cloud_user_data.pl
Perl
bsd-2-clause
1,305
package TCDB:PDB::CutHelixBundle; use warnings; no warnings; #To remove harmeless warnings from overriding accessors use strict; use Data::Dumper; use R2::PDB::Parser; use Class::Struct; #========================================================================== # The purpose of this class is cut PDB files in ...
SaierLaboratory/TCDBtools
perl-modules/TCDB/PDB/CutHelixBundle.pm
Perl
bsd-3-clause
11,487
#!/usr/bin/perl package ConfigISIS_Cisco; use Data::Dumper; use strict; use CiscoTypes; use ConfigCommon; use ConfigParse; use ConfigDB; require Exporter; use vars(qw(@ISA @EXPORT $configdir @isis_db_tables)); @ISA = ('Exporter'); my $debug = 1; ####################################################################...
wenhuizhang/rcc
perl/lib/ConfigISIS_Cisco.pm
Perl
mit
10,920
/* * Copyright (C) 2002, 2007 Christoph Wernhard * * This program is free software; you can redistribute it and/or modify it * under the terms of the GNU General Public License as published by the Free * Software Foundation; either version 2 of the License, or (at your option) * any later version. * * This program is...
TeamSPoon/logicmoo_base
prolog/logicmoo/tptp/infra/src/queries.pl
Perl
mit
4,554
# Copyright 2014 - present MongoDB, Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed t...
dagolden/mongo-perl-driver
devel/lib/MongoDBTest/Mongod.pm
Perl
apache-2.0
1,141
use utf8; # # Copyright 2015 Comcast Cable Communications Management, LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless requir...
dewrich/traffic_control
traffic_ops/app/lib/Schema/Result/DeliveryServiceInfoForServerList.pm
Perl
apache-2.0
4,549
# This file is auto-generated by the Perl DateTime Suite time zone # code generator (0.07) This code generator comes with the # DateTime::TimeZone module distribution in the tools/ directory # # Generated from /tmp/rnClxBLdxJ/northamerica. Olson data version 2013a # # Do not edit this file directly. # package DateTim...
Dokaponteam/ITF_Project
xampp/perl/vendor/lib/DateTime/TimeZone/America/St_Vincent.pm
Perl
mit
1,504
# Licensed to the Apache Software Foundation (ASF) under one # or more contributor license agreements. See the NOTICE file # distributed with this work for additional information # regarding copyright ownership. The ASF licenses this file # to you under the Apache License, Version 2.0 (the # "License"); you may not u...
jiajiechen/mxnet
perl-package/AI-MXNet/lib/AI/MXNet/KVStore.pm
Perl
apache-2.0
19,907
########################################################################### # # This file is auto-generated by the Perl DateTime Suite locale # generator (0.05). This code generator comes with the # DateTime::Locale distribution in the tools/ directory, and is called # generate-from-cldr. # # This file as generated fr...
liuyangning/WX_web
xampp/perl/vendor/lib/DateTime/Locale/ru_RU.pm
Perl
mit
11,756
=head1 NAME X<function> perlfunc - Perl builtin functions =head1 DESCRIPTION The functions in this section can serve as terms in an expression. They fall into two major categories: list operators and named unary operators. These differ in their precedence relationship with a following comma. (See the precedence ta...
liuyangning/WX_web
xampp/perl/lib/pods/perlfunc.pod
Perl
mit
346,554
=head1 NAME perlvar - Perl predefined variables =head1 DESCRIPTION =head2 Predefined Names The following names have special meaning to Perl. Most punctuation names have reasonable mnemonics, or analogs in the shells. Nevertheless, if you wish to use long variable names, you need only say use English; at th...
olapaola/olapaola-android-scripting
perl/src/pod/perlvar.pod
Perl
apache-2.0
59,234
#!/usr/bin/perl use strict; use warnings; use Getopt::Std; use Config::Tiny; use DBI; my (%opt, $library, $gff, $conf, $species, %reads); getopts('g:l:c:s:h', \%opt); var_check(); # Get configuration settings my $Conf = Config::Tiny->read($conf); my $sam = $Conf->{'PIPELINE'}->{'sam'}; my $config = $Conf->{$species};...
nfahlgren/srtools
toolkit/library2geo.pl
Perl
mit
4,263
#!/usr/bin/perl $usage = qq{ hashLookup_tsv.pl <file1> <file2> <field1> <field2a> <field2b> <file1> table or list of IDs to look up (.tsv) <file2> lookup table with two or more fields (.tsv) <field1> field of file1 to match (eg 0) <field2a> field of file2 that matches file1 field ...
cuttlefishh/papers
vibrio-fischeri-transcriptomics/code/perl/hashLookup_tsv.pl
Perl
mit
1,324
#!/usr/bin/perl # nv08info.pl use warnings; use strict; # # The MIT License (MIT) # # Copyright (c) 2015 R. Bruce Warrington, Michael J. Wouters # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the S...
openttp/openttp
software/gpscv/nvs/nv08info.pl
Perl
mit
6,112
#!/usr/bin/perl #use warnings; use Data::Dumper; use String::Util 'trim'; use File::DirWalk; use LWP::UserAgent; use URI::Escape; use JSON; my $ua = LWP::UserAgent->new; sub camel_to_underscore { $_ = shift; # Replace first capital by lowercase # if followed my lowercase. s/^([A-Z])([a-z])/lc($1).$2/e;...
djinn/ddg-webtester
webtester.pl
Perl
mit
3,960
#!/opt/third-party/bin/perl use warnings; use strict; my $time1 = shift; my $time2 = shift; $time1 = convert_to_seconds($time1); $time2 = convert_to_seconds($time2); my $factor = $time1 / $time2; printf("Factor of %.2f\n", $factor); sub convert_to_seconds { my $time = shift; my $to_return; if ( $time =~ ...
benbernard/HomeDir
bin/speedup.pl
Perl
mit
490
############################################################################## # # This library is free software; you can redistribute it and/or # modify it under the terms of the GNU Library General Public # License as published by the Free Software Foundation; either # version 2 of the License, or (at your option...
carlgao/lenga
images/lenny64-peon/usr/share/perl5/Net/Jabber/Debug.pm
Perl
mit
1,473
# Copyright 2008 Raphaël Hertzog <hertzog@debian.org> # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # This program i...
carlgao/lenga
images/lenny64-peon/usr/share/perl5/Dpkg/Source/CompressedFile.pm
Perl
mit
4,209
use strict; # files to be read my $org_file = "const_menu_org.c2"; my $menu_text_file = "const_menu_menu_text.c2"; my $menu_type_file = "const_menu_menu_type.c2"; my $menu_id_file = "const_menu_menu_id.c2"; my $menu_keypress_1_file = "const_menu_keypress_1.c2"; my $menu_keypress_2_file = "const_menu_...
Rosi2143/HSHSB3_CC2
CC2_Projects/Haus_CC2/consts/__const_menu_process.pl
Perl
mit
21,187
#!/usr/bin/perl use Getopt::Long; # Slave machines array. We don't need the master as this script will be executed on master. my @machines = ( 'titanium.dnsdynamic.net', 'tungsten.dnsdynamic.net', 'silicon.dnsdynamic.net' ); my $defaultUser = 'hduser'; my $jdkSymlink = '/opt/jdk'...
manthanhd/gravity
scripts/master/changejdks.pl
Perl
mit
1,746
package MarpaX::Languages::PowerBuilder::SRJ; use base qw(MarpaX::Languages::PowerBuilder::base); #a SRJ parser by Nicolas Georges #helper methods #retrieve pbd entries sub pbd { @{$_[0]->value->{pbd}} } #retrieve object entries sub obj { @{$_[0]->value->{obj}} } #buil...
sebkirche/MarpaX-Languages-PowerBuilder
lib/MarpaX/Languages/PowerBuilder/SRJ.pm
Perl
mit
3,253
name('transpiler'). title('A universal translator for programming languages'). version('0.1'). download('https://github.com/jarble/transpiler/archive/v0.1.zip'). author('Anderson Green','jarble@gmail.com'). packager('Anderson Green','jarble@gmail.com'). maintainer('Anderson Green','jarble@gmail.com'). home('https:/...
jarble/transpiler
pack.pl
Perl
mit
354
use warnings; use strict; package Mail::IMAPClient::MessageSet; =head1 NAME Mail::IMAPClient::MessageSet - ranges of message sequence nummers =cut use overload '""' => "str" , '.=' => sub {$_[0]->cat($_[1])} , '+=' => sub {$_[0]->cat($_[1])} , '-=' => sub {$_[0]->rem($_[1])} , '@{}' ...
carlgao/lenga
images/lenny64-peon/usr/share/perl5/Mail/IMAPClient/MessageSet.pm
Perl
mit
9,027
package Alatar::PostgreSQL::Extractors::PgFunctionExtractor; use Data::Dumper; use strict; use String::Util qw(trim); use Regexp::Common; use Alatar::Configuration; use Alatar::PostgreSQL::Extractors::PgExtractor; use Alatar::PostgreSQL::Extractors::PgTableExtractor; use Alatar::PostgreSQL::PgKeywords; use Alatar::Mod...
olivierauverlot/alatar
Alatar/PostgreSQL/Extractors/PgFunctionExtractor.pm
Perl
mit
5,134
:- module(tuples,[tuples/2,write_tuples/2]). :- use_module(library(lists),[member/2,append/3]). tuples(XDRS,Tuples):- XDRS=xdrs(_Words,_POS,_NEtags,DRS), numbervars(DRS,0,_), conditions(DRS,[],C), setof(Tuple,tuple(C,Tuple),Tuples), !. tuples(_,[]). /* ===============================================...
Shuailong/CCGSupertagging
ext/candc/src/prolog/boxer/tuples.pl
Perl
mit
2,830
#!/usr/bin/perl # # Takes a JMs freeze and changes it into data::dumper format for viewing and editing. # # # Kim Brugger (06 May 2010), contact: kim.brugger@easih.ac.uk use strict; use warnings; use Data::Dumper; use Storable; my $filename = shift || die "no freeze file provided\n"; my $blob = Storable::retriev...
brugger/ctru-pipeline
tools/tmpfile_from_freeze.pl
Perl
mit
425
#!/usr/bin/perl use strict; use warnings; print "\nPlease install VirtualBox first...\n\n" if system("VBoxManage -v > /dev/null 2>&1") != 0; my $vm_name; if(-e 'FagrantFile') { open(FH, '< FagrantFile'); chomp($vm_name = <FH>); close(FH); if(!vm_state($vm_name, 'exists')) { print "VM from Fagra...
xsawyerx/fagrant
fagrant.pl
Perl
mit
4,126
#! /usr/bin/perl -w package LoginApp::Model::User; use Moo; extends 'LoginApp::Model'; sub getUserByFBId { my $class = shift; my ($fbid) = @_; return $class->getDbh->resultset('User')->search({ 'fbid' => $fbid })->first; } 1;
szilardcsom/mojo_login
lib/LoginApp/Model/User.pm
Perl
mit
243
# Copyright 2020, Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
googleads/google-ads-perl
lib/Google/Ads/GoogleAds/V8/Resources/AdGroupAd.pm
Perl
apache-2.0
1,309
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
centreon/common/cisco/standard/snmp/mode/components/temperature.pm
Perl
apache-2.0
5,107
=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2018] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obt...
helensch/ensembl-rest
lib/EnsEMBL/REST/Controller/Phenotype.pm
Perl
apache-2.0
3,212
/* XPM */ static char *logo_32x32_m[] = { /* columns rows colors chars-per-pixel */ "32 32 22 1 ", " c #00708B", ". c #00708C", "X c #01708C", "o c #00708D", "O c #00718D", "+ c #06738F", "@ c #007593", "# c #0B7690", "$ c #127892", "% c #137993", "& c #007CA0", "* c #208099", "= c #0086B0", "- c #0097CB", "; c #00AAE...
termsuite/termsuite-ui
products/fr.univnantes.termsuite.product/img/logo-32x32.m.pm
Perl
apache-2.0
1,593
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016-2017] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a...
james-monkeyshines/ensembl-analysis
modules/Bio/EnsEMBL/Analysis/Runnable/ProteinAnnotation/IPRScan.pm
Perl
apache-2.0
5,135
package Paws::ES::DescribeElasticsearchDomainConfig; use Moose; has DomainName => (is => 'ro', isa => 'Str', traits => ['ParamInURI'], uri_name => 'DomainName', required => 1); use MooseX::ClassAttribute; class_has _api_call => (isa => 'Str', is => 'ro', default => 'DescribeElasticsearchDomainConfig'); cla...
ioanrogers/aws-sdk-perl
auto-lib/Paws/ES/DescribeElasticsearchDomainConfig.pm
Perl
apache-2.0
2,037
=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licen...
dbolser/ensembl-variation
modules/Bio/EnsEMBL/Variation/Pipeline/ProteinFunction/RunWeka.pm
Perl
apache-2.0
4,500
#!/usr/bin/env perl # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016-2017] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License...
danstaines/ensembl-compara
scripts/dumps/dumpTreeMSA_id.pl
Perl
apache-2.0
9,991
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
hardware/server/ibm/bladecenter/snmp/mode/components/ambient.pm
Perl
apache-2.0
3,497
package Google::Ads::AdWords::v201402::TypeMaps::AdGroupAdService; use strict; use warnings; our $typemap_1 = { 'queryResponse/rval/entries/experimentData/experimentDeltaStatus' => 'Google::Ads::AdWords::v201402::ExperimentDeltaStatus', 'mutateResponse/rval/value/ad[ImageAd]/image/urls/k...
gitpan/GOOGLE-ADWORDS-PERL-CLIENT
lib/Google/Ads/AdWords/v201402/TypeMaps/AdGroupAdService.pm
Perl
apache-2.0
218,763
package Google::Ads::AdWords::v201809::ConstantOperand::ConstantType; use strict; use warnings; sub get_xmlns { 'https://adwords.google.com/api/adwords/cm/v201809'}; # derivation by restriction use base qw( SOAP::WSDL::XSD::Typelib::Builtin::string); 1; __END__ =pod =head1 NAME =head1 DESCRIPTION Perl d...
googleads/googleads-perl-lib
lib/Google/Ads/AdWords/v201809/ConstantOperand/ConstantType.pm
Perl
apache-2.0
1,127
package Paws::MarketplaceCommerceAnalytics; use Moose; sub service { 'marketplacecommerceanalytics' } sub version { '2015-07-01' } sub target_prefix { 'MarketplaceCommerceAnalytics20150701' } sub json_version { "1.1" } has max_attempts => (is => 'ro', isa => 'Int', default => 5); has retry => (is => 'ro',...
ioanrogers/aws-sdk-perl
auto-lib/Paws/MarketplaceCommerceAnalytics.pm
Perl
apache-2.0
4,711
package Paws::CloudDirectory::UpdateFacet; use Moose; has AttributeUpdates => (is => 'ro', isa => 'ArrayRef[Paws::CloudDirectory::FacetAttributeUpdate]'); has Name => (is => 'ro', isa => 'Str', required => 1); has ObjectType => (is => 'ro', isa => 'Str'); has SchemaArn => (is => 'ro', isa => 'Str', traits =>...
ioanrogers/aws-sdk-perl
auto-lib/Paws/CloudDirectory/UpdateFacet.pm
Perl
apache-2.0
2,642
package VMOMI::ArrayOfHostVsanInternalSystemDeleteVsanObjectsResult; use parent 'VMOMI::ComplexType'; use strict; use warnings; our @class_ancestors = ( ); our @class_members = ( ['HostVsanInternalSystemDeleteVsanObjectsResult', 'HostVsanInternalSystemDeleteVsanObjectsResult', 1, 1], ); sub get_class_ancestors...
stumpr/p5-vmomi
lib/VMOMI/ArrayOfHostVsanInternalSystemDeleteVsanObjectsResult.pm
Perl
apache-2.0
513
#!/usr/bin/perl =pod Copyright (c) 2012, Salesforce.com, Inc. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: Redistributions of source code must retain the above copyright n...
forcedotcom/PerlKoans
about_scope.pl
Perl
bsd-3-clause
3,449
#!/usr/bin/perl # read from syscalls_darwin_unix.h while(<>){ if(/[0-9]+$/){ my $n = $&; $n += 0x2000000; printf '%s0x%x%s', $`, $n, $' }else{ print } }
8l/ucc-c-compiler
lib/syscalls_darwin.pl
Perl
mit
165
#!perl use strict; use warnings; use lib 'lib'; use Test::More; use Test::BDD::Cucumber::StepFile; use Business::OnlinePayment::BitPay::Client; use Try::Tiny; use Env; require Business::OnlinePayment::BitPay::KeyUtils; require 'features/step_definitions/helpers.pl'; my $pairingCode; my $client; my $token; our $error...
bitpay/bitpay-perl
features/step_definitions/pairing_steps.pl
Perl
mit
1,713
use APR::Request; sub new { my ($class, $pool, %attrs) = @_; my $name = delete $attrs{name}; my $value = delete $attrs{value}; $name = delete $attrs{-name} unless defined $name; $value = delete $attrs{-value} unless defined $value; return unless defined $name and defined $value; m...
oerdnj/rapache
libapreq2/glue/perl/xsbuilder/APR/Request/Cookie/Cookie.pm
Perl
apache-2.0
560
package Google::Ads::AdWords::v201409::CampaignCriterionService::ApiExceptionFault; use strict; use warnings; { # BLOCK to scope variables sub get_xmlns { 'https://adwords.google.com/api/adwords/cm/v201409' } __PACKAGE__->__set_name('ApiExceptionFault'); __PACKAGE__->__set_nillable(); __PACKAGE__->__set_minOccurs()...
gitpan/GOOGLE-ADWORDS-PERL-CLIENT
lib/Google/Ads/AdWords/v201409/CampaignCriterionService/ApiExceptionFault.pm
Perl
apache-2.0
1,109
package Paws::CloudDirectory::GetSchemaAsJsonResponse; use Moose; has Document => (is => 'ro', isa => 'Str'); has Name => (is => 'ro', isa => 'Str'); has _request_id => (is => 'ro', isa => 'Str'); 1; ### main pod documentation begin ### =head1 NAME Paws::CloudDirectory::GetSchemaAsJsonResponse =head1 ATTR...
ioanrogers/aws-sdk-perl
auto-lib/Paws/CloudDirectory/GetSchemaAsJsonResponse.pm
Perl
apache-2.0
493
#------------------------------------------------------------------------------ # File: WriteIPTC.pl # # Description: Write IPTC meta information # # Revisions: 12/15/2004 - P. Harvey Created #------------------------------------------------------------------------------ package Image::ExifTool::IPTC; use...
opf-attic/ref
tools/fits/0.5.0/tools/exiftool/perl/lib/Image/ExifTool/WriteIPTC.pl
Perl
apache-2.0
25,176
package OpenXPKI::Server::Database::Driver::DB2; use Moose; use utf8; with qw( OpenXPKI::Server::Database::Role::SequenceSupport OpenXPKI::Server::Database::Role::MergeEmulation OpenXPKI::Server::Database::Role::Driver ); =head1 Name OpenXPKI::Server::Database::Driver::DB2 - Driver for IBM DB2 databases ...
stefanomarty/openxpki
core/server/OpenXPKI/Server/Database/Driver/DB2.pm
Perl
apache-2.0
1,953
package # Date::Manip::TZ::pawall00; # Copyright (c) 2008-2014 Sullivan Beck. All rights reserved. # This program is free software; you can redistribute it and/or modify it # under the same terms as Perl itself. # This file was automatically generated. Any changes to this file will # be lost the next time 'tzdata' i...
nriley/Pester
Source/Manip/TZ/pawall00.pm
Perl
bsd-2-clause
1,294
% Frame number: 503 holdsAt( orientation( grp_ID0 )=117, 20120 ). holdsAt( appearance( grp_ID0 )=appear, 20120 ). % Frame number: 504 holdsAt( orientation( grp_ID0 )=124, 20160 ). holdsAt( appearance( grp_ID0 )=visible, 20160 ). % Frame number: 505 holdsAt( orientation( grp_ID0 )=135, 20200 ). holdsAt( appeara...
JasonFil/Prob-EC
dataset/strong-noise/18-LeftBag_PickedUp/lbpugtAppearenceGrp.pl
Perl
bsd-3-clause
4,504
#! /usr/bin/env perl use Config; # Check that the perl implementation file modules generate paths that # we expect for the platform use File::Spec::Functions qw(:DEFAULT rel2abs); if (!$ENV{CONFIGURE_INSIST} && rel2abs('.') !~ m|\\|) { die <<EOF; *****************************************************************...
jens-maus/amissl
openssl/Configurations/windows-checker.pm
Perl
bsd-3-clause
653
package Moose::Manual::Construction; # ABSTRACT: Object construction (and destruction) with Moose =pod =head1 NAME Moose::Manual::Construction - Object construction (and destruction) with Moose =head1 VERSION version 2.0602 =head1 WHERE'S THE CONSTRUCTOR? B<Do not define a C<new()> method for your classes!> ...
leighpauls/k2cro4
third_party/perl/perl/vendor/lib/Moose/Manual/Construction.pod
Perl
bsd-3-clause
6,143
# Part of get-flash-videos. See get_flash_videos for copyright. package FlashVideo::Site::Xvideos; use strict; use base 'FlashVideo::Site::Xnxx'; 1;
njtaylor/get-flash-videos
lib/FlashVideo/Site/Xvideos.pm
Perl
apache-2.0
151