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# $Id: RFC1738.pm,v 2.106 2008/05/23 21:30:10 abigail Exp $ package Regexp::Common::URI::RFC1738; use strict; local $^W = 1; use Regexp::Common qw /pattern clean no_defaults/; use vars qw /$VERSION @EXPORT @EXPORT_OK %EXPORT_TAGS @ISA/; use Exporter (); @ISA = qw /Exporter/; ($VERSION) = q $Revision: 2.106 $ =~ /...
schwern/Regexp-Common
lib/Regexp/Common/URI/RFC1738.pm
Perl
mit
5,308
=pod =head1 NAME RSA_padding_add_PKCS1_type_1, RSA_padding_check_PKCS1_type_1, RSA_padding_add_PKCS1_type_2, RSA_padding_check_PKCS1_type_2, RSA_padding_add_PKCS1_OAEP, RSA_padding_check_PKCS1_OAEP, RSA_padding_add_SSLv23, RSA_padding_check_SSLv23, RSA_padding_add_none, RSA_padding_check_none - asymmetric encryption ...
google/google-ctf
third_party/edk2/CryptoPkg/Library/OpensslLib/openssl/doc/crypto/RSA_padding_add_PKCS1_type_1.pod
Perl
apache-2.0
3,878
# # Copyright 2017 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
maksimatveev/centreon-plugins
hardware/server/hp/proliant/snmp/mode/components/daacc.pm
Perl
apache-2.0
4,333
#!/usr/bin/env perl use strict; use warnings; use FindBin; use lib ("$FindBin::Bin/../PerlLib"); use Gene_obj; use Gene_obj_indexer; use GFF3_utils; use Carp; $|++; my $usage = "\n\nusage: $0 gff3_file\n\n"; my $gff3_file = $ARGV[0] or die $usage; main: { my $gene_obj_indexer_href = {}; my $asmbl_id...
shujishigenobu/OkORF
util/remove_eclipsed_ORFs.pl
Perl
mit
2,317
######################################################################## # Bio::KBase::ObjectAPI::KBaseGenomes::Feature - This is the moose object corresponding to the Feature object # Authors: Christopher Henry, Scott Devoid, Paul Frybarger # Contact email: chenry@mcs.anl.gov # Development location: Mathematics and Co...
kbase/KBaseFBAModeling
lib/Bio/KBase/ObjectAPI/KBaseGenomes/Feature.pm
Perl
mit
21,696
+{ locale_version => 0.93, entry => <<'ENTRY', # for DUCET v6.2.0 00E4 ; [.15EF.0021.0002.00E4][.164C.0021.0002.00E4] # LATIN SMALL LETTER A WITH DIAERESIS 0061 0308 ; [.15EF.0021.0002.00E4][.164C.0021.0002.00E4] # LATIN SMALL LETTER A WITH DIAERESIS 00C4 ; [.15EF.0021.0008.00C4][.164C.0021.0008.00C4] #...
Dokaponteam/ITF_Project
xampp/perl/lib/Unicode/Collate/Locale/de_phone.pl
Perl
mit
2,775
# !!!!!!! DO NOT EDIT THIS FILE !!!!!!! # This file is machine-generated by mktables from the Unicode # database, Version 6.1.0. Any changes made here will be lost! # !!!!!!! INTERNAL PERL USE ONLY !!!!!!! # This file is for internal use by core Perl only. The format and even the # name or existence of this ...
liuyangning/WX_web
xampp/perl/lib/unicore/lib/Blk/Avestan.pl
Perl
mit
423
#!/usr/bin/perl -w use strict; # use of SRCDIR/SUBDIR is required for supporting VPath builds my $srcdir = $ENV{'SRCDIR'} or die 'SRCDIR environment variable is not set'; my $subdir = $ENV{'SUBDIR'} or die 'SUBDIR environment variable is not set'; my $regress_in = "$srcdir/$subdir/regress.in"; my $expected_out = "...
amaliujia/CMUDB-peloton
src/postgres/interfaces/libpq/test/regress.pl
Perl
apache-2.0
1,698
## ## English tables ## package Date::Language::Chinese_GB; use Date::Language (); use vars qw(@ISA @DoW @DoWs @MoY @MoYs @AMPM @Dsuf %MoY %DoW $VERSION); @ISA = qw(Date::Language); $VERSION = "1.01"; @DoW = qw(ÐÇÆÚÈÕ ÐÇÆÚÒ» ÐÇÆÚ¶þ ÐÇÆÚÈý ÐÇÆÚËÄ ÐÇÆÚÎå ÐÇÆÚÁù); @MoY = qw(Ò»Ô ¶þÔ ÈýÔ ËÄÔ ÎåÔ ÁùÔ ÆßÔ °ËÔ ¾Å...
Dokaponteam/ITF_Project
xampp/perl/vendor/lib/Date/Language/Chinese_GB.pm
Perl
mit
918
package Chromosome::0Sum; use v5.10; use strict; use warnings; use Moo::Role; =head1 NAME Chromosome::0Sum - Abstract Class for 0 Sum Chromosomes. =head1 DESCRIPTION The sum of all weights of a 0 Sum Chromosome must be 0. To ensure that, each gene can have any weight name as value. Half of the genes add 1 to it's ...
meis/2048GA
lib/Chromosome/0Sum.pm
Perl
mit
1,051
# http-client-suspect: Watch http clients if (($lgfile eq $config{CUSTOM7_LOG}) and ($line =~ /^(\S+)\s+-[\s\/[\]:-\d+A-z".]{2,}\s+HTTP\/1.\d"\s\d+\s\d+\s"-"\s"Ruby"$/)) { return ("Kakashi [sharingan] knocked a bad browser",$1,"kakashi-sharingan-http-client-suspect","30","80,443","0"); }
gpupo/kakashi
src/sharingan/20-http-client-suspect.pl
Perl
mit
308
package HMF::Pipeline::Realignment; use FindBin::libs; use discipline; use File::Spec::Functions; use List::MoreUtils qw(uniq); use HMF::Pipeline::Functions::Bam; use HMF::Pipeline::Functions::Job qw(fromTemplate); use HMF::Pipeline::Functions::Sge qw(qsubTemplate); use HMF::Pipeline::Functions::Config qw(createDirs...
hartwigmedical/pipeline
lib/HMF/Pipeline/Realignment.pm
Perl
mit
1,853
require 5; package Pod::Simple::PullParserEndToken; use Pod::Simple::PullParserToken (); use strict; use vars qw(@ISA $VERSION); @ISA = ('Pod::Simple::PullParserToken'); $VERSION = '3.23'; sub new { # Class->new(tagname); my $class = shift; return bless ['end', @_], ref($class) || $class; } # Purely accessors: ...
amidoimidazol/bio_info
Beginning Perl for Bioinformatics/lib/Pod/Simple/PullParserEndToken.pm
Perl
mit
2,879
#!/usr/bin/env perl use strict; my %keepid; my $infa = shift; my $maxlcfrac = shift; sub evalseq { my ($id, $seq) = @_; if(length($id) > 0 && length($seq) > 0) { $seq =~ s/[\s\t\r\n]//g; my $fulllen = length($seq); $seq =~ s/[ACGTacgt]//g; my $badlen = length($seq); ...
mccrowjp/utilities
fasta_filter_low_complexity.pl
Perl
mit
1,424
#!/usr/bin/env perl use strict; use warnings; use Data::Dumper; use Getopt::Long; use File::Basename qw/fileparse dirname basename/; use Bio::Perl; use File::Copy qw/copy move/; use FindBin qw/$RealBin/; $0=fileparse $0; sub logmsg{print STDERR "$0: @_\n";} exit(main()); sub main{ my $settings={clean=>0}; GetOpt...
lskatz/lyve-SET
scripts/launch_snap.pl
Perl
mit
7,579
package Prophet::Meta::Types; { $Prophet::Meta::Types::VERSION = '0.751'; } # ABSTRACT: extra types for Prophet use Any::Moose; use Any::Moose 'Util::TypeConstraints'; enum 'Prophet::Type::ChangeType' => qw/add_file add_dir update_file delete/; enum 'Prophet::Type::FileOpConflict' => qw/delete_missing_file updat...
gitpan/Prophet
lib/Prophet/Meta/Types.pm
Perl
mit
2,115
%neg/2 - służy do znajdowania negacji danego literału. neg(~X, X) :- !. neg(X, ~X). %lit/1 - sprawdza czy X jest literałem. lit(X) :- atom(X). lit(~X) :- atom(X). %get_var/2 - zwraca pierwszy literał danej klauzuli. get_var(C v _, C) :- lit(C). %sel_alt/2 - zwraca klauzulę bez pierwszego literał...
wiatrak2/Metody_programowania
theorem_prover/Wojciech_Pratkowiecki.pl
Perl
mit
4,153
#!/usr/bin/perl use strict; use warnings; use WWW::Shopify; package WWW::Shopify::Model::Order::LineItem; use parent "WWW::Shopify::Model::NestedItem"; my $fields; sub fields { return $fields; } BEGIN { $fields = { "fulfillment_service" => new WWW::Shopify::Field::String::Enum(["automatic", "manual"]), "fulfillm...
gitpan/WWW-Shopify
lib/WWW/Shopify/Model/Order/LineItem.pm
Perl
mit
1,859
#!/usr/bin/perl -w #use strict; use Spreadsheet::ParseExcel; use Encode qw(encode decode); use Config::General; use Getopt::Long; use Time::localtime; GetOptions (\%o, "help"); #$enc = 'utf-8'; if(exists($o{'help'})){ print <<"::_USAGE0_BLOCK_END_::"; usage: mkConfigOptionsFile.pl [options] option...
parlar/calls2xls
bin/mkConfigOptionsFile.pl
Perl
mit
1,933
#! /usr/bin/perl # # Copyright (c) 2001-2008, PostgreSQL Global Development Group # # $PostgreSQL: pgsql/src/backend/utils/mb/Unicode/UCS_to_EUC_JP.pl,v 1.10 2008/01/01 19:45:53 momjian Exp $ # # Generate UTF-8 <--> EUC_JP code conversion tables from # map files provided by Unicode organization. # Unfortunately it is p...
KMU-embedded/mosbench-ext
postgres/postgresql-8.3.9/src/backend/utils/mb/Unicode/UCS_to_EUC_JP.pl
Perl
mit
4,669
package RebootNow; use strict; use warnings; use utf8; sub plugin { MT->component('RebootNow'); } sub reboot_now { my ($app) = @_; return $app->permission_denied() unless $app->user->is_superuser(); $app->reboot; $app->redirect( $app->uri( 'mode' => 'tools', ...
usualoma/mt-plugin-RebootNow
plugins/RebootNow/lib/RebootNow.pm
Perl
mit
810
#!/usr/local/bin/perl # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. #...
warelab/gramene-ensembl
gramene/utils/clean_up_hive_db.pl
Perl
mit
1,823
/* * GIPO COPYRIGHT NOTICE, LICENSE AND DISCLAIMER. * * Copyright 2001 - 2003 by R.M.Simpson W.Zhao T.L.McCLuskey D Liu D. Kitchin * * Permission to use, copy, modify, and distribute this software and its * documentation for any purpose and without fee is hereby granted, * provided that the above copyright notic...
TeamSPoon/logicmoo_workspace
packs_sys/logicmoo_ec/prolog/hyhtn_pddl/ptools/compile.pl
Perl
mit
1,687
package Example; use strict; use warnings; use List::Util 'first'; my @allergens = qw(eggs peanuts shellfish strawberries tomatoes chocolate pollen cats); sub new { my ($class, $score) = @_; my $self = bless {} => $class; $self->{score} = reverse sprintf "%08b", $score; return $self; } sub allergi...
dnmfarrell/xperl5
allergies/Example.pm
Perl
mit
555
#!/usr/bin/perl =head1 NAME generate_r_snp_dist.pl generate R commads for reading SNP and genome coverage data, and introgression regions. Output will be R graphs by chromosome , X axis is position , Y axis is SNP frequency, with introgression regions highlighted You can also mask introgressions using SNPs from an...
nmenda/GenomeTools
generate_r_snp_dist.pl
Perl
mit
4,826
use strict; use warnings; use Bio::EnsEMBL::Registry; my $registry = 'Bio::EnsEMBL::Registry'; $registry->load_registry_from_db( -host => 'mysql-ens-sta-1', -user => 'ensro', -port => 4519, ); #$registry->load_registry_from_db( # -host => 'ensembldb.ensembl.org', # -user => 'anonymous', # -DB_VERSION => 97,...
at7/work
api/cat_xrefs.pl
Perl
apache-2.0
749
# Copyright 2020, Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
googleads/google-ads-perl
lib/Google/Ads/GoogleAds/V8/Services/CustomerClientService.pm
Perl
apache-2.0
1,043
=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2018] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obta...
muffato/public-plugins
tools/modules/EnsEMBL/Web/Job/VEP.pm
Perl
apache-2.0
6,699
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
apps/bluemind/local/mode/webserver.pm
Perl
apache-2.0
5,415
# # Copyright 2019 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
Sims24/centreon-plugins
hardware/printers/standard/rfc3805/mode/papertray.pm
Perl
apache-2.0
6,120
#!/usr/bin/env perl # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016-2017] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the Licens...
willmclaren/ensembl-rest
script/ensembl_rest_test_server.pl
Perl
apache-2.0
2,794
=head1 LICENSE Copyright [1999-2014] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licen...
andrewyatz/public-plugins
users/modules/EnsEMBL/Users/Command/Account/Details/RemoveLogin.pm
Perl
apache-2.0
1,499
=head1 LICENSE Copyright 2010, The WormBase Consortium. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of ...
adamsardar/perl-libs-custom
EnsemblAPI/ensembl/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/PristionchusPacificus.pm
Perl
apache-2.0
2,415
=head1 LICENSE Copyright [1999-2014] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licen...
dbolser-ebi/ensembl-compara
modules/Bio/EnsEMBL/Compara/RunnableDB/PairwiseSynteny.pm
Perl
apache-2.0
5,311
#! /usr/bin/perl eval '(exit $?0)' && eval 'exec perl -w -S $0 ${1+"$@"}' & eval 'exec perl -w -S $0 $argv:q' if 0; # ****************************************************************** # Author: Chad Elliott # Date: 4/8/2004 # $Id: clone_build_tree.pl 2092 2012-03-07 21:32:25Z johnsonb $ # ...
batmancn/TinySDNController
ACE_wrappers/MPC/clone_build_tree.pl
Perl
apache-2.0
16,290
# # Copyright 2021 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
Tpo76/centreon-plugins
cloud/azure/database/cosmosdb/mode/availability.pm
Perl
apache-2.0
4,810
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
network/sophos/es/snmp/mode/health.pm
Perl
apache-2.0
2,450
package AnyJob::Worker::Context::Base; ############################################################################### # Convenient base class which all specific worker context modules should extend. # # Author: LightStar # Created: 05.03.2018 # Last update: 07.03.2018 # use strict; use warnings; use utf8...
lightstar/anyjob
lib/AnyJob/Worker/Context/Base.pm
Perl
apache-2.0
1,999
#!/usr/bin/env perl use strict; use Bio::EnsEMBL::Registry; use File::Spec; use Bio::EnsEMBL::Funcgen::DBSQL::DBAdaptor; use Bio::EnsEMBL::Hive::DBSQL::DBConnection; use Getopt::Long; my $registry; my $species; my $gff_file; my $bed_file; my $min_id; my $max_id; my $feature_set_id; GetOptions ( 'registry=s' => \$...
Ensembl/ensembl-funcgen
scripts/export/export_alignments.pl
Perl
apache-2.0
3,510
# perfd.pl - PerfStat Daemon use warnings; use IO::Socket qw(:DEFAULT :crlf); use CGI::Carp qw(carpout); use IO::File; use File::Copy; use Mail::Sendmail; use POSIX qw(:sys_wait_h :errno_h sys_wait_h); use Fcntl qw(:DEFAULT); use Storable qw(lock_retrieve lock_store freeze thaw); use Host; use Service; use Metric; use...
ktenzer/perfstat
server/unix/build/1.52/src/perfd.pl
Perl
apache-2.0
36,178
% This file is part of the Attempto Parsing Engine (APE). % Copyright 2008-2013, Attempto Group, University of Zurich (see http://attempto.ifi.uzh.ch). % % The Attempto Parsing Engine (APE) is free software: you can redistribute it and/or modify it % under the terms of the GNU Lesser General Public License as published...
tiantiangao7/kalm
scripts/prolog/ape/lexicon/functionwords.pl
Perl
bsd-3-clause
7,578
package VCP::Dest::data_dump ; =head1 NAME VCP::Dest::data_dump - developement output =head1 DESCRIPTION Dump all data structures. Requires the module BFD, which is not installed automatically. Not a supported module, API and behavior may change without warning. =cut $VERSION = 0.1 ; @ISA = qw( VCP::Dest ); u...
gitpan/VCP-autrijus-snapshot
lib/VCP/Dest/data_dump.pm
Perl
bsd-3-clause
866
#!/usr/bin/perl # Sweetie Belle is best pony! use strict; use warnings; use POE qw(Component::IRC Component::IRC::Plugin::BotCommand Component::IRC::Plugin::Connector); use AuraIRC::IRC; use IRC::Utils qw(parse_user lc_irc); my $nickname = "Aura"; my $ircname = "Aura"; my $server = "2tuhbv75pl4ilp27.onion"; my @c...
Openponies/Aura
aurairc.pl
Perl
bsd-3-clause
2,693
#!/usr/bin/perl use 5.010; use warnings; use strict; my $exit = 0; my $sample = "AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAG" . "AGTGTCTGATAGCAGC"; my $out = `echo $sample | ./rosalind-dna`; $exit++ if ($out ne "20 12 17 21\n"); $exit++ unless (system("echo 0 | ./rosalind-dna")); exit $exit;
mikeyhc/rosalind
dna/t/01_default.pl
Perl
bsd-3-clause
310
package Games::Lacuna::Client::Buildings::Capitol; use 5.0080000; use strict; use Carp 'croak'; use warnings; use Games::Lacuna::Client; use Games::Lacuna::Client::Buildings; our @ISA = qw(Games::Lacuna::Client::Buildings); sub api_methods { return { view => { default_args => [qw(session_id building_i...
RedOrion/Vasari-TLEUtil
lib/Games/Lacuna/Client/Buildings/Capitol.pm
Perl
mit
931
/******************************************************************* * * A Common Lisp compiler/interpretor, written in Prolog * * (arglists.pl) * * * Douglas'' Notes 2017: * * * *******************************************************************/ :- module(kp4rms, []). :- include('./header'). :- meta_pred...
TeamSPoon/MUD_ScriptEngines
prolog/wam_cl/paramfns.pl
Perl
mit
2,524
#!/usr/bin/perl use warnings; use strict; use Test::More; use Test::Exception; use List::Util qw(min max); # FIXME: fix it to connect to your DB ############################################ use DBI; my $con_params = { db => "example", # FIXME socket => "/var/lib/mysql/mysql.sock", #FIXME user => "root", pass => ...
breqwas/mysql-bit-strings
test.pl
Perl
mit
8,184
:- module(binarise,[binarise/3]). :- use_module(library(lists),[member/2,select/3,append/3]). :- use_module(printError,[error/2,error/3]). /* ----------------------------------------------------------------------- Binarising: put branches in a list -----------------------------------------------------------------...
TeamSPoon/logicmoo_workspace
packs_sys/logicmoo_nlu/ext/candc/src/data/italian/prolog/binarise.pl
Perl
mit
12,173
=begin pod =head1 JSON::Tiny C<JSON::Tiny> is a minimalistic module that reads and writes JSON. It supports strings, numbers, arrays and hashes (no custom objects). =head1 Synopsis use JSON::Tiny; my $json = to-json([1, 2, "a third item"]); my $copy-of-original-data-structure = from-json($json); =end p...
niner/panda
ext/JSON__Tiny/lib/JSON/Tiny.pm
Perl
mit
1,619
# Copyright 1999-2006 University of Chicago # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed t...
globus/globus-toolkit
gram/jobmanager/lrms/fork/source/fork.pm
Perl
apache-2.0
25,231
# !!!!!!! DO NOT EDIT THIS FILE !!!!!!! # This file is machine-generated by mktables from the Unicode # database, Version 6.1.0. Any changes made here will be lost! # !!!!!!! INTERNAL PERL USE ONLY !!!!!!! # This file is for internal use by core Perl only. The format and even the # name or existence of this ...
Dokaponteam/ITF_Project
xampp/perl/lib/unicore/lib/Lb/BK.pl
Perl
mit
431
package DDG::Spice::BitbucketStatus; # ABSTRACT: Returns the status of Bitbucket use DDG::Spice; use Text::Trim; spice is_cached => 1; spice proxy_cache_valid => "200 5m"; spice wrap_jsonp_callback => 1; spice to => 'http://status.bitbucket.org/index.json'; triggers any => 'bitbucket', 'bb'; handle remainder => s...
soleo/zeroclickinfo-spice
lib/DDG/Spice/BitbucketStatus.pm
Perl
apache-2.0
499
=head1 NAME perldebguts - Guts of Perl debugging =head1 DESCRIPTION This is not L<perldebug>, which tells you how to use the debugger. This manpage describes low-level details concerning the debugger's internals, which range from difficult to impossible to understand for anyone who isn't incredibly intimate with P...
Dokaponteam/ITF_Project
xampp/perl/lib/pods/perldebguts.pod
Perl
mit
37,672
use strict; use warnings; use File::Copy; my $cmd_string = join (" ",@ARGV); my $results = `$cmd_string`; my @files = split("\n",$results); my $fileNameOut = $ARGV[6]; my ($drive, $outputDir, $file) = File::Spec->splitpath( $fileNameOut ); my $destination = $fileNameOut; foreach my $thisLine (@files) { if ($thisLine...
loraine-gueguen/tools-iuc
tools/emboss_5/emboss_single_outputfile_wrapper.pl
Perl
mit
586
# Copyright (C) 2008 Luke Kenneth Casson Leighton <lkcl@lkcl.net> # Copyright (C) 2008 Martin Soto <soto@freedesktop.org> # Copyright (C) 2008 Alp Toker <alp@atoker.com> # Copyright (C) 2009 Adam Dingle <adam@yorba.org> # Copyright (C) 2009 Jim Nelson <jim@yorba.org> # Copyright (C) 2009, 2010 Igalia S.L. # # This libr...
shinate/phantomjs
src/qt/qtwebkit/Source/WebCore/bindings/scripts/CodeGeneratorGObject.pm
Perl
bsd-3-clause
61,061
use Win32::OLE 'in'; use Win32::OLE::Const 'Microsoft WMI Scripting '; my $ComputerName = "."; my $NameSpace = "root/cimv2"; my $ClassName = "Win32_Share"; my $WbemServices = Win32::OLE->GetObject("winmgmts://$ComputerName/$NameSpace"); my $Share = $WbemServices->Get($ClassName,wbemFlagUseAmendedQualifiers); my $M...
VDBBjorn/Besturingssystemen-III
Labo/reeks4/Reeks4_46.pl
Perl
mit
1,077
# # $Header: svn://svn/SWM/trunk/web/Seasons.pm 11617 2014-05-20 05:57:52Z sliu $ # package Seasons; require Exporter; @ISA = qw(Exporter); @EXPORT=qw(handleSeasons insertMemberSeasonRecord memberSeasonDuplicateResolution viewDefaultAssocSeasons getDefaultAssocSeasons syncAllowSeasons checkForMemberSeasonRecord season...
facascante/slimerp
fifs/web/Seasons.pm
Perl
mit
86,495
name(ape). version('6.7.180715'). % see http://www.swi-prolog.org/howto/PackInfo.html download('https://github.com/Attempto/APE/releases/*.zip'). title('Parser for Attempto Controlled English (ACE)'). author('Kaarel Kaljurand','kaljurand@gmail.com'). author('Norbert E. Fuchs','fuchs@ifi.uzh.ch'). author('Tobias Kuhn...
TeamSPoon/logicmoo_workspace
packs_sys/logicmoo_nlu/ext/ape/pack.pl
Perl
mit
389
/* Part of LogicMOO Base Logicmoo Path Setups % =================================================================== % File '$FILENAME.pl' % Purpose: An Implementation in SWI-Prolog of certain debugging tools % Maintainer: Douglas Miles % Contact: $Author: dmiles $@users.sourceforge.net ; % Version: '$FILENAME.pl' 1.0.0...
TeamSPoon/logicmoo_workspace
packs_sys/logicmoo_utils/prolog/body_reordering/logicmoo_util_body_nauts.pl
Perl
mit
3,530
#!/usr/bin/env perl # Shashwat Deepali Nagar, 2016 # Jordan Lab, Georgia Tech # Perl script to find and replace words/phrases in a Docx document use strict; my @fileList = ("SampleDoc.docx"); # Populate this list with filenames my $find = "TestWord"; # Substitute with word to be replaced my $replace = "Genius"; # ...
ShashwatDNagar/FindReplace_Docx
FindReplace_docx.pl
Perl
mit
816
############################################################################# # # Apache::Session::Store::DBI # A base class for the MySQL, Postgres, and other DBI stores # Copyright(c) 2000, 2004 Jeffrey William Baker (jwbaker@acm.org) # Distribute under the Perl License # #############################################...
carlgao/lenga
images/lenny64-peon/usr/share/perl5/Apache/Session/Store/DBI.pm
Perl
mit
2,961
#!/home/ben/software/install/bin/perl use warnings; use strict; use XML::Parser; use FindBin; use Image::SVG::Path 'extract_path_info'; use utf8; my $dir = "$FindBin::Bin/kanjivg"; # The grep only allows the "normal" files from the complete list of # files. my @files = grep /\/[0-9a-f]+\.svg$/, <$dir/*.svg>; my %str...
Belxjander/Perception-IME
Resources/KanjiVG/check-all-strokes.pl
Perl
mit
3,674
package PrefixRC::Status; use strict; use warnings; use Moo; has pid_dir => ( is => 'rw' ); has program => ( is => 'rw' ); sub BUILD { my $self = shift; } sub run { my $self = shift; my $action = shift; $action = '' unless $action; if ( $action eq 'start' ) { $self->_print_process($act...
adjust/PrefixRC
lib/PrefixRC/Status.pm
Perl
mit
2,111
use strict; use Data::Dumper; use Carp; # # This is a SAS Component # =head1 NAME aliases_to_fids =head1 SYNOPSIS aliases_to_fids [arguments] < input > output =head1 DESCRIPTION aliases_to_fids is used to search for the feature ids that a set of given aliases maps to. Example: aliases_to_fids [arguments]...
kbase/kb_seed
scripts/aliases_to_fids.pl
Perl
mit
2,450
#!/usr/local/bin/perl #------------------------------------- # MakeDB4 # (C)1999 Harvard University # # W. S. Lane/P. Djeu # # v3.1a # # licensed to Finnigan #------------------------------------- ################################################ # Created: 7/18/00 by Peter Djeu # Description: A web wrapper around ...
wangchulab/CIMAGE
cravatt_web/cgi-bin/flicka/makedb4.pl
Perl
mit
49,516
/* Part of ClioPatria SeRQL and SPARQL server Author: Jan Wielemaker E-mail: J.Wielemaker@cs.vu.nl WWW: http://www.swi-prolog.org Copyright (C): 2014, University of Amsterdam, VU University Amsterdam This program is free software; you can redistribute it and/or mo...
TeamSPoon/logicmoo_workspace
packs_web/ClioPatria/api/pengines.pl
Perl
mit
1,954
package SOAP::Message; require 5; use strict; use vars qw($VERSION); use XML::XPath; use XML::XPath::XMLParser; $VERSION = '0.01'; =head1 NAME SOAP::Message - Really simple SOAP =head1 DESCRIPTION Simple SOAP for the unwashed masses =head1 SYNOPSIS use SOAP::Message; ## Procedural interface # Make S...
jkb78/extrajnm
local/lib/perl5/SOAP/Message.pm
Perl
mit
5,426
#!/usr/bin/perl -w $gnuplot="gnuplot"; # or complete path $preamble="preamble.gpi"; $function=$ARGV[0]; unless($function) { print STDERR "usage: $0 <function_definition_file.gpi>\n"; exit 1; } $dir="$function.d"; $plot="plot.gpi"; $format='png'; $t_i=0; $t_f=7; $step=0.0075; # time step mkdir $dir; open...
gderosa/2d_well
plot.pl
Perl
mit
755
package PJVM; use 5.008001; use strict; use warnings; our $VERSION = "0.01_03"; 1; __END__ =head1 NAME PJVM - Java virtual machine written in Perl =head1 SYNOPSIS use PJVM; my $rt = PVJM::Runtime->new({classpath => [qw(.)]}); my $class = $rt->init_class("MyApp"); $class->main(@ARGV); =head1 DESCRIPTI...
claesjac/pjvm
lib/PJVM.pm
Perl
mit
2,679
#!/usr/bin/env perl #--------------------------------------------------- %from = (); %links = (); print STDERR "reading good names...\n"; open GOOD, "<./goodpagelinks.csv" or die $!; for (<GOOD>) { if (my ($a,$b) = /^(\d+),"\[(.*)\]"$/) { my @c = split(",",$b); for my $to (@c) { push(@{$from{$to}},$a); ...
erikwilson/wiki-hop
import/filter_fromlinks.pl
Perl
mit
1,408
package Paws::Batch::ContainerOverrides; use Moose; has Command => (is => 'ro', isa => 'ArrayRef[Str|Undef]', request_name => 'command', traits => ['NameInRequest']); has Environment => (is => 'ro', isa => 'ArrayRef[Paws::Batch::KeyValuePair]', request_name => 'environment', traits => ['NameInRequest']); has Me...
ioanrogers/aws-sdk-perl
auto-lib/Paws/Batch/ContainerOverrides.pm
Perl
apache-2.0
2,359
package Google::Ads::AdWords::v201809::CustomAffinityStatus; use strict; use warnings; sub get_xmlns { 'https://adwords.google.com/api/adwords/rm/v201809'}; # derivation by restriction use base qw( SOAP::WSDL::XSD::Typelib::Builtin::string); 1; __END__ =pod =head1 NAME =head1 DESCRIPTION Perl data type ...
googleads/googleads-perl-lib
lib/Google/Ads/AdWords/v201809/CustomAffinityStatus.pm
Perl
apache-2.0
1,105
% Towers of Hanoi % % The Towers of Hanoi is a game played with three poles and a number of discs of different sizes which can slide onto any pole. % The game starts with all the discs stacked in ascending order of size on one pole, the smallest at the top. % The aim of the game is to move the entire stack to another p...
s-webber/projog
src/test/resources/towers-of-hanoi-example.pl
Perl
apache-2.0
766
=head1 NAME LedgerSMB::Report::Unapproved::Batch_Detail - List Vouchers by Batch in LedgerSMB =head1 SYNPOSIS my $report = LedgerSMB::Report::Unapproved::Batch_Detail->new( %$request ); $report->run; $report->render($request, $format); =head1 DESCRIPTION This provides an ability to search for (and ap...
tridentcodesolution/tridentcodesolution.github.io
projects/CRM/LedgerSMB-master/LedgerSMB/Report/Unapproved/Batch_Detail.pm
Perl
apache-2.0
5,951
package Paws::WAF::CreateSizeConstraintSet; use Moose; has ChangeToken => (is => 'ro', isa => 'Str', required => 1); has Name => (is => 'ro', isa => 'Str', required => 1); use MooseX::ClassAttribute; class_has _api_call => (isa => 'Str', is => 'ro', default => 'CreateSizeConstraintSet'); class_has _retur...
ioanrogers/aws-sdk-perl
auto-lib/Paws/WAF/CreateSizeConstraintSet.pm
Perl
apache-2.0
1,900
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
cloud/azure/network/loadbalancer/plugin.pm
Perl
apache-2.0
1,953
# # Copyright 2018 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
wilfriedcomte/centreon-plugins
network/oneaccess/snmp/mode/cpu.pm
Perl
apache-2.0
3,374
=head1 LICENSE Copyright (c) 1999-2013 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. For license details, please see http://www.ensembl.org/info/about/legal/code_licence.html =head1 CONTACT Please email...
dbolser-ebi/ensembl-variation
modules/Bio/EnsEMBL/Variation/Pipeline/DataDumps/ReleaseDumps_conf.pm
Perl
apache-2.0
9,552
:- module(_, _, [functions]). :- use_module(library(terms)). :- use_module(ciaosrc('CIAOSETTINGS')). :- use_module(ciaosrc('CIAOSHARED')). :- reexport(ciaosrc('doc/common/LPDOCCOMMON')). :- reexport(ciaosrc('CIAOSETTINGS'), [lpdoclib/1]). :- redefining(_). :- discontiguous fileoption/2. % -*- mode: Makefile; -*- %...
leuschel/ecce
www/CiaoDE/ciao/library/objects/Doc/LPSETTINGS.pl
Perl
apache-2.0
6,893
package Paws::SDB::GetAttributes; use Moose; has AttributeName => (is => 'ro', isa => 'Str'); has ConsistentRead => (is => 'ro', isa => 'Bool'); has DomainName => (is => 'ro', isa => 'Str', required => 1); has ItemName => (is => 'ro', isa => 'Str', required => 1); use MooseX::ClassAttribute; class_has ...
ioanrogers/aws-sdk-perl
auto-lib/Paws/SDB/GetAttributes.pm
Perl
apache-2.0
2,236
package Google::Ads::AdWords::v201809::GoalOptimizedShoppingAd; use strict; use warnings; __PACKAGE__->_set_element_form_qualified(1); sub get_xmlns { 'https://adwords.google.com/api/adwords/cm/v201809' }; our $XML_ATTRIBUTE_CLASS; undef $XML_ATTRIBUTE_CLASS; sub __get_attr_class { return $XML_ATTRIBUTE_CLASS;...
googleads/googleads-perl-lib
lib/Google/Ads/AdWords/v201809/GoalOptimizedShoppingAd.pm
Perl
apache-2.0
5,282
# # Copyright 2022 Centreon (http://www.centreon.com/) # # Centreon is a full-fledged industry-strength solution that meets # the needs in IT infrastructure and application monitoring for # service performance. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in com...
centreon/centreon-plugins
cloud/azure/management/resource/mode/deploymentsstatus.pm
Perl
apache-2.0
6,814
## OpenXPKI::FileUtils package OpenXPKI::FileUtils; use strict; use warnings; use English; use Class::Std; use OpenXPKI::Debug; use OpenXPKI::Exception; use File::Spec; use File::Temp; use Fcntl qw( :DEFAULT ); my %safe_filename_of :ATTR; # a hash of filenames created with safe_tmpfile my %safe_dir_of :ATTR; ...
openxpki/openxpki
core/server/OpenXPKI/FileUtils.pm
Perl
apache-2.0
9,292
package Fixtures::Region; # # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, s...
knutsel/traffic_control-1
traffic_ops/app/lib/Fixtures/Region.pm
Perl
apache-2.0
1,109
=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2022] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obta...
Ensembl/ensembl-analysis
modules/Bio/EnsEMBL/Analysis/Runnable/Aspera.pm
Perl
apache-2.0
4,288
#! /usr/bin/perl use utf8; use strict; use warnings; die "perl $0 <kegg.path> <the first number> \n" unless(@ARGV eq 2); my(%ra, %qv); open FA, $ARGV[0] or die $!; <FA>; while(<FA>) { chomp; my @tmp = split /\t/; my $ratio = $tmp[3] / $tmp[4]; $ra{$tmp[2]} = $ratio; $qv{$tmp[2]} = "$tmp[6]\t$tmp[3]"; } close FA;...
BaconKwan/Perl_programme
utility/keggGradient.pl
Perl
apache-2.0
1,669
package OpenXPKI::Test::ConfigWriter; use Moose; use utf8; =head1 NAME OpenXPKI::Test::ConfigWriter - Create test configuration files (YAML) =cut # Core modules use File::Path qw(make_path); use File::Spec; # CPAN modules use Moose::Util::TypeConstraints; use YAML::Tiny 1.69; use Test::More; use Test::Exception; u...
oliwel/openxpki
core/server/t/lib/OpenXPKI/Test/ConfigWriter.pm
Perl
apache-2.0
6,783
#!/usr/bin/env perl # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute # Copyright [2016-2021] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License...
Ensembl/ensembl-variation
scripts/import/compress_genotypes_by_seq_region.pl
Perl
apache-2.0
10,603
:- module(_,[sql_persistent_tr/2, sql_goal_tr/2, dbId/2],[assertions]). :- use_module(library(dynamic)). :- use_module(library(lists),[append/3]). :- use_module(library('persdb_mysql_op/persdbrt_mysql_op'), [assert_args/4]). :- use_module(library('persdb_mysql_op/pl2sql')). :- use_module(library('persdb_mysql_op/sql...
leuschel/ecce
www/CiaoDE/ciao/library/persdb_mysql_op/persdbtr_mysql_op.pl
Perl
apache-2.0
11,891
#!/usr/bin/perl # KEWUN - Georg Fischer 4.3.1969 und 12.2.1973 (in ALGOL 60 on TR440) # @(#) $Id: kewun2.pl 232 2009-08-27 22:17:16Z gfis $ # Copyright (c) 1969, 2009 Dr. Georg Fischer use strict; my ($n, $k, $g, $i, $na, $ne, $b0, $b1, $p0, $p1, $q0, $q1); $na = shift(@ARGV); # untere Grenze $ne = shift(@ARGV); ...
gfis/ramath
test/cf/kewun2.pl
Perl
apache-2.0
1,126
package ChimericCigarParser; use strict; use warnings; use Carp; require Exporter; our @ISA = qw(Exporter); our @EXPORT = qw(get_genome_coords_via_cigar); #### sub get_genome_coords_via_cigar { my ($rst, $cigar) = @_; ## borrowing this code from my SAM_entry.pm my $genome_lend = $rst; my $ali...
STAR-Fusion/STAR-Fusion
PerlLib/ChimericCigarParser.pm
Perl
bsd-3-clause
1,699
#!/usr/bin/perl -w use strict; use File::Temp qw/tempdir/; my $usage = q{Usage: kmrun.pl seed file weights nstart Runs clustering experiment with given settings. Prints out inputs, outputs, number of seconds. }; my $seed = shift; my $file = shift; my $weights = shift; my $nstart = shift; die $usage unless (defined $s...
ai-ku/upos_2014
src/scripts/kmrun.pl
Perl
mit
1,210
package d; use datestring; open my $f, '<', $INC{'datestring.pm'} or die "<datestring: $!"; undef local $/; my $ds = <$f>; $ds =~ s/datestring/d/; eval $ds; 1;
benizi/dotfiles
perl-lib/d.pm
Perl
mit
160
=pod =head1 NAME OPENSSL_malloc_init, OPENSSL_malloc, OPENSSL_zalloc, OPENSSL_realloc, OPENSSL_free, OPENSSL_clear_realloc, OPENSSL_clear_free, OPENSSL_cleanse, CRYPTO_malloc, CRYPTO_zalloc, CRYPTO_realloc, CRYPTO_free, OPENSSL_strdup, OPENSSL_strndup, OPENSSL_memdup, OPENSSL_strlcpy, OPENSSL_strlcat, OPENSSL_hexstr2...
pmq20/ruby-compiler
vendor/openssl/doc/man3/OPENSSL_malloc.pod
Perl
mit
10,872
use v6; # Specification: # P09 (**) Pack consecutive duplicates of list elements into sublists. # If a list contains repeated elements they should be placed in separate # sublists. # Example: # > pack_dup(<a a a a b c c a a d e e e e>).perl.say # [["a","a","a","a"],["b"],["c","c"],["a","a"],["d"],["e","e...
Mitali-Sodhi/CodeLingo
Dataset/perl/P09-unobe.pl
Perl
mit
567
package Paws::Glue::DeleteCrawlerResponse; use Moose; has _request_id => (is => 'ro', isa => 'Str'); ### main pod documentation begin ### =head1 NAME Paws::Glue::DeleteCrawlerResponse =head1 ATTRIBUTES =head2 _request_id => Str =cut 1;
ioanrogers/aws-sdk-perl
auto-lib/Paws/Glue/DeleteCrawlerResponse.pm
Perl
apache-2.0
250
%Create perfect numbers top :- findall(C, perfect(100, C), X), ok(X). ok([ 3213876088517980551083924184681057554444177758164088967397376, 12554203470773361527671578846336104669690446551334525075456, 191561942608236107294793378084303638130997321548169216, 4676805239458889338251790981121777817047314255...
LogtalkDotOrg/logtalk3
examples/bench/perfect.pl
Perl
apache-2.0
1,901
package Paws::SSM::GetInventoryResult; use Moose; has Entities => (is => 'ro', isa => 'ArrayRef[Paws::SSM::InventoryResultEntity]'); has NextToken => (is => 'ro', isa => 'Str'); has _request_id => (is => 'ro', isa => 'Str'); ### main pod documentation begin ### =head1 NAME Paws::SSM::GetInventoryResult =h...
ioanrogers/aws-sdk-perl
auto-lib/Paws/SSM/GetInventoryResult.pm
Perl
apache-2.0
667
package CoGe::ECNCS::DB::Spike; use strict; use base 'CoGe::ECNCS::DB'; BEGIN { use Exporter (); use vars qw($VERSION @ISA @EXPORT @EXPORT_OK %EXPORT_TAGS); $VERSION = '0.1'; @ISA = (@ISA, qw(Exporter)); #Give a hoot don't pollute, do not export more than needed by default @EXPORT ...
asherkhb/coge
modules/ECNCS/lib/CoGe/ECNCS/DB/Spike.pm
Perl
bsd-2-clause
2,382
package VCP::Filter::csv_trace ; =head1 NAME VCP::Filter::csv_trace - developement logging filter =head1 DESCRIPTION Dumps fields of revisions in CSV format. Not a supported module, API and behavior may change without warning. =cut $VERSION = 0.1 ; @ISA = qw( VCP::Filter ); use strict ; #use base qw( VCP::Fil...
gitpan/VCP
lib/VCP/Filter/csv_trace.pm
Perl
bsd-3-clause
3,025