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interpro_active_site/advanced/idx2term.json

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+{}

interpro_active_site/basic/idx2term.json

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+{"0": "Serine/threonine-protein kinase, active site [IPR008271]", "1": "Ubiquitin-conjugating enzyme, active site [IPR023313]"}

interpro_active_site/consensus.joblib

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:9ea3a9a17e3bcf2a17270489ac209b0b58ceab10b58bb61331f93ca0e04f4eed
+size 86836

interpro_active_site/df_merge.tsv

@@ -0,0 +1 @@
+term	overlap	setsize	score	pval	overlap_mean	setsize_mean	score_mean	pval_mean	overlap_std	setsize_std	score_std	pval_std	pval_hit	pval_50	pval_100	pval_250	pval_500

interpro_active_site/metrics.json

@@ -0,0 +1,7 @@
+{
+    "type_of_task": "ranksum",
+    "signature_size": 3630,
+    "annotations_size": 57,
+    "title": "Average number of proteins per term",
+    "value": 2.789473684210526
+}

interpro_active_site/paths.json

@@ -0,0 +1 @@
+{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C057/C057_val_log2fc"}

interpro_active_site/result.tsv

@@ -0,0 +1,11 @@
+Term	es	nes	pval	sidak	fdr	geneset_size	leading_edge	leading_edge_size
+Ubiquitin-activating enzyme E1, Cys active site [IPR033127]	0.7488282326991985	0.9429077023470646	0.3457281148418578	0.9999999999685064	0.5185921722627868	3	Q9UBT2,P22314	2
+Thiolase, active site [IPR020610]	0.5054852318969566	0.6080018282469704	0.5431862613355052	1.0	0.7006583390635989	5	P24752,P42765,P55084	3
+Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]	0.6117088983662013	0.4615336101527307	0.644415813536587	1.0	0.7985152472083795	3	Q16881	1
+ATP:guanido phosphotransferase active site [IPR022415]	0.5722160970231421	0.3789948062627716	0.7046917206616017	1.0	0.8546261293130063	2	P12532	1
+Thiolase, acyl-enzyme intermediate active site [IPR020615]	0.4127557511531085	0.2753231721784923	0.78306796332388	1.0	0.9109157940706358	5	P24752,P42765,P55084	3
+Malate dehydrogenase, active site [IPR001252]	0.4385336273428749	0.0859296889292064	0.931522310438931	1.0	0.9873195015211924	2	P40925	1
+Ribonucleotide reductase small subunit, acitve site [IPR030475]	0.41179713340682	0.0571188673864634	0.9544505069578142	1.0	0.9873195015211924	2	Q7LG56	1
+Serine/threonine-protein kinase, active site [IPR008271]	0.1968286886207173	0.0451156924892723	0.964015093360798	1.0	0.9873195015211924	57	Q13464,P51956,O00311,Q2M2I8,Q9H2G2,Q9Y5S2	6
+Peptidase S16, active site [IPR008268]	0.3864388092612875	0.0376106621673859	0.9699981067576626	1.0	0.9873195015211924	2	P36776	1
+Ubiquitin-conjugating enzyme, active site [IPR023313]	0.2284768211920498	0.0067415034217495	0.9946210992464796	1.0	0.9946210992464796	6	P61086,P68036,Q16763,P61088,P60604	5

interpro_active_site/selections.json

@@ -0,0 +1 @@
+{"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase,  active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Coenzyme A transferase active site [IPR004164]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "DNA/RNA non-specific endonuclease, active site [IPR018524]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Lipase, GDXG, putative serine active site [IPR033140]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["AAK1", "ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT1", "AKT2", "AMPD2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "AURKA", "AURKB", "BLMH", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CAPN5", "CDC42BPB", "CDC7", "CDK1", "CDK11B", "CDK16", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CHEK2", "CHUK", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "ENDOG", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GSK3A", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "IKBKB", "LDHA", "LDHB", "LONP1", "LONP2", "MAP2K1", "MAP3K7", "MAPK1", "MAPK3", "MARK2", "MASTL", "MDH1", "MDH2", "NCEH1", "NEK3", "NEK9", "NME1", "NME2", "OXCT1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN1", "PKN2", "PLK1", "PREP", "PRKAA2", "PRKACA", "PRKCD", "PRPF4B", "PTK7", "PTPMT1", "PTPN1", "PTPN11", "PTPN23", "PTPRF", "RIPK1", "RNASET2", "RNGTT", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "RRM2B", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2G2", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "UNG", "VRK1", "VRK2", "WNK1"], "leading_proteins": ["AAK1", "ACAA2", "ACAT1", "CDC42BPB", "CDC7", "CKMT1A*", "HADHB", "LONP1", "MDH1", "NEK3", "ROCK1", "RRM2B", "SLK", "TXNRD1", "UBA1", "UBA2", "UBE2G2", "UBE2K", "UBE2L3", "UBE2N", "UBE2S"]}

interpro_binding_site/advanced/idx2term.json

@@ -0,0 +1 @@
+{"0": "IQ motif, EF-hand binding site [IPR000048]"}

interpro_binding_site/basic/idx2term.json

@@ -0,0 +1 @@
+{"0": "IQ motif, EF-hand binding site [IPR000048]", "1": "Protein kinase, ATP binding site [IPR017441]"}

interpro_binding_site/consensus.joblib

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+version https://git-lfs.github.com/spec/v1
+oid sha256:9956328e56c887fc447441b93409bbe633bfd3b141b4062e449e6de70d09ce3d
+size 83114

interpro_binding_site/df_merge.tsv

@@ -0,0 +1,2 @@
+term	overlap	setsize	score	pval	overlap_mean	setsize_mean	score_mean	pval_mean	overlap_std	setsize_std	score_std	pval_std	pval_hit	pval_50	pval_100	pval_250	pval_500
+IQ motif, EF-hand binding site [IPR000048]	9	12	2.6203436625621785	0.0087841196022806	4.902912621359223	10.79368932038835	-0.2273048691062784	0.5134620963427197	2.787853554074696	2.339749173467172	1.002129759133213	0.3214407723554939	1.0	0.1788224008957527	0.0583817580096799	0.0161470643842222	0.0028781147210985

interpro_binding_site/metrics.json

@@ -0,0 +1,7 @@
+{
+    "type_of_task": "ranksum",
+    "signature_size": 3630,
+    "annotations_size": 33,
+    "title": "Average number of proteins per term",
+    "value": 4.818181818181818
+}

interpro_binding_site/paths.json

@@ -0,0 +1 @@
+{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C057/C057_val_log2fc"}

interpro_binding_site/result.tsv

@@ -0,0 +1,7 @@
+Term	es	nes	pval	sidak	fdr	geneset_size	leading_edge	leading_edge_size
+IQ motif, EF-hand binding site [IPR000048]	0.7023786711577714	2.6203436625621785	0.0087841196022806	0.252601377148282	0.0598252310652483	12	Q15051,Q92614,Q86VI3,Q7Z406,P35580,O00159,P35579,O94832,O43795	9
+PPM-type phosphatase, divalent cation binding [IPR000222]	0.6441700337790095	1.0011911144917234	0.3167344214866063	0.9999965209962236	0.5406841854550489	4	Q9P0J1	1
+Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]	0.6105292171995493	0.5045445617652295	0.61387875606005	0.999999999999977	0.8440832895825688	2	P00505	1
+2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]	0.4484280198565903	0.2797323317268093	0.7796828710492696	1.0	0.8865483339202777	4	P36957,P10515,P11182	3
+Aconitase family, 4Fe-4S cluster binding site [IPR018136]	0.5361080485115709	0.2756989823638686	0.7827792773058038	1.0	0.8865483339202777	2	Q99798	1
+Protein kinase, ATP binding site [IPR017441]	0.2278827345769233	0.2456501932920296	0.8059530308366161	1.0	0.8865483339202777	51	Q13464,Q16513,P51956,O00311,O96013,O95747,Q13043,Q99640,Q9H2G2,O75116,P11802,Q9Y5S2	12

interpro_binding_site/selections.json

@@ -0,0 +1 @@
+{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Coenzyme A transferase binding site [IPR004163]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit I, copper-binding site [IPR023615]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]", "Ureohydrolase, manganese-binding site [IPR020855]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT1", "AKT2", "APEX1", "APOBEC3C", "ARG2", "AURKA", "AURKB", "BPNT1", "CALM3", "CALU", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDC42BPB", "CDC7", "CDK1", "CDK16", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CETN2", "CHUK", "COX1", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CYB5B", "DBT", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "EPS15L1", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQCB1", "IQGAP1", "IQGAP2", "IQGAP3", "ITSN2", "LETM1", "MACF1", "MAP2K1", "MAP3K7", "MAPK1", "MAPK14", "MAPK3", "MARK2", "MCCC1", "MCFD2", "METAP2", "MICU1", "MYH10", "MYH14", "MYH9", "MYO18A", "MYO1B", "MYO1C", "MYO1D", "NEK3", "NFS1", "NRDC", "NUCB1", "NUCB2", "OXCT1", "OXSR1", "PA2G4", "PAK2", "PAK4", "PC", "PCCA", "PDCD6", "PDHX", "PDP1", "PEF1", "PGD", "PKMYT1", "PKN1", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1F", "PPM1G", "PRKAA2", "PRKACA", "PRKCD", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "STK26", "STK4", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["ACO2", "CDC42BPB", "CDC7", "CDK4", "DBT", "DLAT", "DLST", "GOT2", "IQCB1", "IQGAP3", "MYH10", "MYH14", "MYH9", "MYO18A", "MYO1B", "MYO1C", "MYO1D", "NEK3", "OXSR1", "PAK4", "PDP1", "PKMYT1", "PKN2", "ROCK1", "ROCK2", "SLK", "STK4"]}

interpro_conserved_site/advanced/idx2term.json

@@ -0,0 +1 @@
+{"0": "Bromodomain, conserved site [IPR018359]", "1": "Zinc finger, PHD-type, conserved site [IPR019786]", "2": "Zinc finger, RING-type, conserved site [IPR017907]", "3": "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "4": "Heat shock protein 70, conserved site [IPR018181]"}

interpro_conserved_site/basic/idx2term.json

@@ -0,0 +1 @@
+{"0": "Bromodomain, conserved site [IPR018359]", "1": "Zinc finger, PHD-type, conserved site [IPR019786]", "2": "Zinc finger, RING-type, conserved site [IPR017907]", "3": "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "4": "Heat shock protein 70, conserved site [IPR018181]", "5": "Actinin-type actin-binding domain, conserved site [IPR001589]", "6": "DnaJ domain, conserved site [IPR018253]", "7": "Kinesin motor domain, conserved site [IPR019821]", "8": "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "9": "Chaperonin TCP-1, conserved site [IPR002194]", "10": "ATPase, AAA-type, conserved site [IPR003960]"}

interpro_conserved_site/consensus.joblib

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+version https://git-lfs.github.com/spec/v1
+oid sha256:ac852d1fc85712678cad282ae3052df5627ce603024f9381ac37fc3eea10e853
+size 112724

interpro_conserved_site/df_merge.tsv

@@ -0,0 +1,7 @@
+term	overlap	setsize	score	pval	overlap_mean	setsize_mean	score_mean	pval_mean	overlap_std	setsize_std	score_std	pval_std	pval_hit	pval_50	pval_100	pval_250	pval_500
+Bromodomain, conserved site [IPR018359]	7	11	2.3942940369652987	0.0166523930788984	5.529126213592233	9.820388349514564	-0.8552206791946717	0.3841686679671253	2.4920507041843005	1.8359336252623952	0.9945124236501974	0.3161254538359859	1.0	0.1157751708195439	0.2186221342412543	0.4627901258069825	0.1199524552735497
+Intermediate filament protein, conserved site [IPR018039]	3	8	2.2063478693322987	0.0273596520935615	4.060679611650485	7.546116504854369	0.7869831563787604	0.2926647109331939	1.9153715257926656	0.8924219614624045	1.3691577499316503	0.3120813432784052	1.0	1.0	0.1626892876910785	0.0708153438700075	0.0098879726868235
+Zinc finger, PHD-type, conserved site [IPR019786]	8	18	2.194114363751661	0.0282271889017433	7.924757281553398	15.968446601941748	-0.8932990755852599	0.405709433078066	4.135058338809696	3.50470897017074	1.057968995875309	0.3390198533771147	1.0	1.0	0.1043706933170995	0.4007853524207055	0.0539791573859534
+Zinc finger, RING-type, conserved site [IPR017907]	8	17	2.129306995722241	0.0332288693923552	4.609223300970874	14.776699029126211	-0.045326225777209	0.5577732895844865	3.238903742779499	4.550007017672923	0.8841385018499901	0.2924846286854669	1.0	0.0876325329480415	0.0767446240128207	0.4522434981148837	0.7323442203982553
+Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]	5	13	2.082366322184312	0.0373090221723495	4.951456310679611	9.776699029126211	-0.8483999101163021	0.4005956075506935	2.187247420210493	1.8164942167575489	0.9035429813719144	0.3144938579483745	1.0	1.0	1.0	0.0064387619157215	0.0063533232968262
+Heat shock protein 70, conserved site [IPR018181]	6	10	2.04187738612514	0.0411636954671221	5.157766990291262	9.618932038834952	-0.5977526314899951	0.5182608346902362	2.6978709448427782	0.6407904897015557	0.7298098612304945	0.3042104761407978	1.0	1.0	1.0	0.2577455317022596	0.113339965404402

interpro_conserved_site/metrics.json

@@ -0,0 +1,7 @@
+{
+    "type_of_task": "ranksum",
+    "signature_size": 3630,
+    "annotations_size": 290,
+    "title": "Average number of proteins per term",
+    "value": 2.8241379310344827
+}

interpro_conserved_site/paths.json

@@ -0,0 +1 @@
+{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C057/C057_val_log2fc"}

interpro_conserved_site/result.tsv

@@ -0,0 +1,59 @@
+Term	es	nes	pval	sidak	fdr	geneset_size	leading_edge	leading_edge_size
+Bromodomain, conserved site [IPR018359]	0.6788587103071793	2.3942940369652987	0.0166523930788984	0.9923255207926898	0.1097544089291032	11	Q86U86,O60885,Q15059,Q12830,Q9NRL2,P25440,Q9UIG0	7
+Intermediate filament protein, conserved site [IPR018039]	0.703155027164301	2.2063478693322987	0.0273596520935615	0.9996792537397	0.1469314649469043	8	Q03252,P07197,P48681	3
+Zinc finger, PHD-type, conserved site [IPR019786]	0.5469739815948695	2.194114363751661	0.0282271889017433	0.9997523856917572	0.1488342687546468	18	Q96T23,Q9UIG0,Q12830,Q9Y2K7,Q92576,O94880,Q9BTC0,Q96L73	8
+Zinc finger, RING-type, conserved site [IPR017907]	0.5456203145342507	2.1293069957222412	0.0332288693923552	0.9999445546383492	0.1690591600663688	17	Q14527,O60858,Q99496,O75150,P14373,Q13049,O15344,Q99590	8
+Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]	0.5924653288973027	2.0823663221843116	0.0373090221723495	0.9999837369688608	0.1717399433330376	13	Q9Y3C6,Q13356,P30414,Q13427,Q6UX04	5
+Heat shock protein 70, conserved site [IPR018181]	0.6310757041328163	2.0418773861251394	0.0411636954671221	0.9999949196207824	0.1865229950853973	10	P34932,P0DMV9,O95757,P54652,P11142,Q9Y4L1	6
+Actinin-type actin-binding domain, conserved site [IPR001589]	0.5450998586539562	1.8997772895150435	0.0574623524761221	0.999999964793344	0.2109377495958916	14	Q14315,O75369,Q01082,P21333,P46939	5
+DnaJ domain, conserved site [IPR018253]	0.5493048551630404	1.8062343960157996	0.0708817343400969	0.9999999994497129	0.2335875336207739	13	Q5F1R6,Q8WXX5,O75190,Q99543,Q96EY1,P25685,Q9NXW2	7
+FERM conserved site [IPR019747]	0.6258731938875406	1.7930097298110963	0.07297136830346	0.9999999997135738	0.2377718742472294	8	Q9Y2J2,O43491,Q9Y490	3
+Ribosomal protein L7Ae conserved site [IPR004037]	0.8993936052921853	1.6802568705745655	0.0929073486053986	0.9999999999994764	0.2777642380986144	2	P62424	1
+Kinesin motor domain, conserved site [IPR019821]	0.5177210386375443	1.600688128733997	0.1094460117906153	0.9999999999999974	0.308148965235713	13	Q99661,Q02241,Q9Y496,Q14807,Q86Y91,Q96Q89,O00139,P33176	8
+Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]	0.7275148223035852	1.5886576497296985	0.1121377051227752	0.999999999999999	0.3097136617676648	5	P48735	1
+Adenylate kinase, conserved site [IPR033690]	0.7259090751719876	1.5814618300886831	0.1137724797837465	0.9999999999999992	0.3112643314838347	5	P27144,Q9UIJ7	2
+Ribosomal protein L24e, conserved site [IPR023442]	0.8539140022050822	1.487196419244592	0.1369629415228848	1.0	0.3413127732417349	2	Q9UHA3	1
+Guanylate kinase, conserved site [IPR020590]	0.591836842002158	1.3955894181089306	0.1628381708251307	1.0	0.3660703065061079	7	Q8N3R9	1
+Ribosomal S11, conserved site [IPR018102]	0.7965821389195332	1.243616951273579	0.2136405743789753	1.0	0.4363082152810059	2	P82912	1
+Ubiquitin-activating enzyme E1, conserved site [IPR018074]	0.7910694597574397	1.2202845690283952	0.2223570173962055	1.0	0.4380596422137154	2	Q9UBT2	1
+Mini-chromosome maintenance, conserved site [IPR018525]	0.5862873484644919	1.1855887615813745	0.2357847425991412	1.0	0.4502377006457545	6	P33991	1
+Ribosomal protein L24/L26, conserved site [IPR005825]	0.7690187431091748	1.1272908470243848	0.2596195309950788	1.0	0.4697413659573012	2	P61254	1
+Chromo domain, conserved site [IPR023779]	0.6130484839376409	1.0729077196873664	0.283312522076093	1.0	0.494943562663054	5	P45973,O14646,Q13185	3
+Vinculin, conserved site [IPR000633]	0.7475192943770839	1.0373364048599618	0.2995791051352816	1.0	0.5202271885582734	2	P18206	1
+HMG box A DNA-binding domain, conserved site [IPR017967]	0.7683876154021982	1.017215074089716	0.3090511265806719	1.0	0.5303244183928689	3	P26583	1
+Enolase, conserved site [IPR020809]	0.7392502756339656	1.0029873948620576	0.3158669431358314	1.0	0.5388318441728889	2	P09104	1
+Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]	0.7086549062844847	0.8774972371609495	0.3802166188448967	1.0	0.605839667390346	2	P13995	1
+Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]	0.7086549062844487	0.877497237160804	0.3802166188449758	1.0	0.605839667390346	2	Q6UB35	1
+Ubiquitin specific protease, conserved site [IPR018200]	0.3750883376559872	0.8518544614743688	0.3942948744832553	1.0	0.6143111881456154	16	P40818,Q9UPT9	2
+Ubiquitin interacting motif [IPR003903]	0.5577950991264691	0.8283879103890154	0.4074508509890702	1.0	0.6143111881456154	5	O14964	1
+AT hook, DNA-binding motif [IPR017956]	0.7179487179487157	0.8274655486570826	0.4079732411701902	1.0	0.6143111881456154	3	P17096,Q6ZRS2	2
+Ribosomal protein L13, conserved site [IPR023563]	0.6948732083792666	0.8219971075503235	0.4110785431085282	1.0	0.6143111881456154	2	P40429	1
+Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]	0.5963237541118293	0.8041725570795594	0.4212973254774659	1.0	0.6201838801444929	4	Q8N4Q0	1
+Sterol reductase, conserved site [IPR018083]	0.7094017094017071	0.7960212768256032	0.4260196686636555	1.0	0.6239682015780812	3	Q9UBM7,Q14739	2
+Heat shock protein Hsp90, conserved site [IPR019805]	0.6779707747449657	0.682814581594123	0.4947240144727556	1.0	0.6655282463607912	3	P08238,P07900	2
+Integrin alpha chain, C-terminal cytoplasmic region, conserved site [IPR018184]	0.6579382579933771	0.6775125669110134	0.4980807994076306	1.0	0.6656379346922252	2	P17301	1
+Guanine-nucleotide dissociation stimulator, CDC24, conserved site [IPR001331]	0.653432588916457	0.597686279214282	0.5500492823099699	1.0	0.6905380600428193	3	Q12979,P11274	2
+ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]	0.3227154575413112	0.5798516025625671	0.5620146953827982	1.0	0.6995032689313797	20	Q7L014,Q9UHI6,Q8TDD1,Q9BUQ8,Q96GQ7,Q86XP3	6
+Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]	0.6287210584343903	0.5689227118842016	0.5694085915172153	1.0	0.705677314273472	2	P29692	1
+Dynamin, GTPase region, conserved site [IPR019762]	0.6317876760375625	0.5255406731369835	0.5992073864271836	1.0	0.7332073504805201	3	P50570	1
+EGF-like, conserved site [IPR013032]	0.6108048511576731	0.50549910295355	0.6132083283462912	1.0	0.7440603147298095	2	Q04721	1
+S100/Calbindin-D9k, conserved site [IPR001751]	0.5931642778390305	0.445818303422338	0.6557284992599026	1.0	0.7825566452072912	2	P60903	1
+Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]	0.572491730981246	0.3798432449494334	0.7040617791071386	1.0	0.8272400217503861	2	Q00796	1
+Polyprenyl synthetase, conserved site [IPR033749]	0.5831265508684829	0.3760944354141106	0.7068466910533069	1.0	0.8272400217503861	3	O95749,Q5T2R2	2
+Alpha-D-phosphohexomutase, conserved site [IPR016066]	0.5828508409153534	0.3753060782797348	0.7074328461865371	1.0	0.8272400217503861	3	Q96G03,O95394	2
+Chaperonin TCP-1, conserved site [IPR002194]	0.3522915516289326	0.350650932658813	0.7258502409336207	1.0	0.8453677504849397	8	P50991,P40227,P78371,P48643,P49368,P17987,P50990	7
+Thiolase, conserved site [IPR020613]	0.3642229510981465	0.2337243763811717	0.8151989622078244	1.0	0.9234675743760512	6	P55084	1
+Cadherin conserved site [IPR020894]	0.3944571958587227	0.1494362344691389	0.8812094217419864	1.0	0.9684559654206768	4	P19022,O60245	2
+Clathrin adaptor complex, small chain [IPR000804]	0.3640696096751197	0.1489046412418173	0.8816288788657196	1.0	0.9684559654206768	5	P61923	1
+Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]	0.4705071664828955	0.1330524162178443	0.8941519268179388	1.0	0.9720194378433132	2	Q9NQW7	1
+D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]	0.3781025923883083	0.1187439634938768	0.9054782050957372	1.0	0.9720194378433132	4	Q9UBQ7,Q13363,P56545	3
+IMP dehydrogenase / GMP reductase, conserved site [IPR015875]	0.436879823594252	0.0838787060090152	0.9331528700302772	1.0	0.990734159002388	2	P20839	1
+Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]	0.4316674893773206	0.0728253154371377	0.9419451256348372	1.0	0.990734159002388	3	Q02809	1
+Phosphorylase pyridoxal-phosphate attachment site [IPR035090]	0.42282249173097	0.0679010457065467	0.9458644063227912	1.0	0.990734159002388	2	P06737	1
+Ribosomal protein S5, N-terminal, conserved site [IPR018192]	0.4222712238147619	0.067326302426708	0.9463219380815912	1.0	0.990734159002388	2	P82675	1
+Ras GTPase-activating protein, conserved site [IPR023152]	0.3951373381128792	0.0404017264453191	0.9677728538703316	1.0	0.9908240729672136	3	Q86VI3	1
+Thioredoxin, conserved site [IPR017937]	0.2198671393710627	0.0342842501745252	0.9726504840268672	1.0	0.9908240729672136	12	P13667,P30101,Q8NBS9	3
+Oxysterol-binding protein, conserved site [IPR018494]	0.2579062764312614	0.027251454495461	0.9782591761726058	1.0	0.9908240729672136	6	P22059	1
+ATPase, AAA-type, conserved site [IPR003960]	0.1959634974046828	0.0242414318161882	0.9806600300199332	1.0	0.9908240729672136	23	O15381,P35998,O75449,P62195,Q9BVQ7,P17980,P62333,Q8NB90,Q9Y4W6,P62191,Q96TA2,P55072,Q9UN37	13
+Ribosomal protein L3, conserved site [IPR019926]	0.3183572216096931	0.0124190831882696	0.9900912599755604	1.0	0.9908240729672136	2	P39023	1
+DNA mismatch repair, conserved site [IPR014762]	0.3125689084895164	0.0115005725851679	0.9908240729672136	1.0	0.9908240729672136	2	P54277	1

interpro_conserved_site/selections.json

@@ -0,0 +1 @@
+{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Aldose 1-epimerase, conserved site [IPR018052]", "Alpha-2-macroglobulin, conserved site [IPR019742]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Aminotransferase, class IV, conserved site [IPR018300]", "Amyloidogenic glycoprotein,  copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Anion exchange, conserved site [IPR018241]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "Arrestin, conserved site [IPR017864]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAMSAP, spectrin and Ca2+/calmodulin-binding region [IPR031372]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Clusterin, conserved site [IPR033986]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific,  conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA mismatch repair, conserved site [IPR014762]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family A, conserved site [IPR019760]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Deoxyribonuclease, TatD-related, conserved site [IPR018228]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FHF complex subunit HOOK interacting protein, KELAA motif [IPR045668]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanine-nucleotide dissociation stimulator, CDC24, conserved site [IPR001331]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site [IPR023076]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Integrin alpha chain, C-terminal cytoplasmic region, conserved site [IPR018184]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Low-density lipoprotein (LDL) receptor class A, conserved site [IPR023415]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "MoaA/NifB/PqqE, iron-sulphur binding, conserved site [IPR000385]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Pyridoxamine 5'-phosphate oxidase, conserved site [IPR019740]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RIO kinase, conserved site [IPR018935]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P,  conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S14, conserved site [IPR018271]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Uncharacterised protein family UPF0029, Impact, conserved site [IPR020569]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB10", "ABCB6", "ABCB7", "ABCB8", "ABCC1", "ABCC4", "ABCD3", "ABCD4", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ABR", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADS", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1A2", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA3", "ANXA6", "ANXA7", "AP1M1", "AP1S1", "AP1S2", "AP2M1", "AP2S1", "AP3M1", "AP3S1", "AP4M1", "APEX1", "APLP2", "APP", "ARHGEF7", "ARIH2", "ARRB2", "ATAD1", "ATAD2", "ATP5C1", "ATP5O", "BAG6", "BAK1", "BAZ1A", "BAZ1B", "BAZ2A", "BCAT2", "BCR", "BCS1L", "BLM", "BOP1", "BPNT1", "BPTF", "BRCA1", "BRD2", "BRD3", "BRD4", "BUD31", "CAD", "CALR", "CAMSAP3", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CD109", "CD320", "CDH2", "CDK5RAP1", "CDKAL1", "CENPE", "CETN2", "CHAF1B", "CHD1", "CHD1L", "CHD4", "CLGN", "CLU", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CORO7", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CWC27", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHFR", "DHRS4", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX29", "DHX30", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIS3", "DLG3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJB11", "DNAJB12", "DNAJB6", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC16", "DNAJC2", "DNAJC21", "DNAJC9", "DNM1L", "DNM2", "DNM3", "DNMT1", "DPY30", "DRG1", "DRG2", "DSC3", "DSG2", "DST", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EED", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "EIF4E2", "ENO1", "ENO2", "EPB41", "EPB41L2", "EPB41L3", "EPB41L5", "EPDR1", "EPHA7", "EPN1", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FAM160B2", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FIGNL1", "FLNA", "FLNB", "FLNC", "FUCA1", "FUCA2", "GAA", "GALK1", "GALM", "GALNS", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GGPS1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUF1", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLA-B", "HLA-F", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMGCR", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "ILVBL", "IMPACT", "IMPAD1", "IMPDH1", "IMPDH2", "INA", "IQGAP1", "IQGAP2", "IQGAP3", "ITGA2", "ITGAV", "IVD", "KATNA1", "KDM2A", "KDSR", "KIF11", "KIF18B", "KIF20A", "KIF20B", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LDLR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK14", "MAPK3", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "ME2", "MGST2", "MID1", "MIF", "MOCS1", "MPI", "MPP1", "MPP2", "MPP5", "MPP6", "MPP7", "MPST", "MRPL13", "MRPL24", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTF2", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFS8", "NDUFV1", "NEFL", "NEFM", "NES", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NOTCH2", "NSD1", "NSD2", "NSD3", "NSF", "NTHL1", "NUBP2", "NUBPL", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL2", "OSBPL3", "OSBPL8", "OSBPL9", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PAX6", "PBRM1", "PCDH7", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA5", "PDIA6", "PDSS1", "PEBP1", "PEPD", "PEX6", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF14", "PHF3", "PHF8", "PHGDH", "PHIP", "PI4KA", "PI4KB", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PMS1", "PNP", "PNPLA6", "PNPO", "POLA1", "POLD1", "POLG", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "PPIB", "PPIC", "PPID", "PPIE", "PPIF", "PPIG", "PPIH", "PPIL1", "PPIL2", "PPIL3", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RBBP4", "RBBP7", "RCL1", "RDH13", "RDX", "RIDA", "RIOK2", "RNF14", "RNF2", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS29", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "RTCA", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCAF11", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC25A42", "SLC27A4", "SLC2A1", "SLC4A2", "SLIT2", "SMARCA4", "SMG1", "SMS", "SMU1", "SNRNP40", "SNU13", "SORD", "SPAST", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX10", "STX12", "STX18", "STX4", "STX5", "STX6", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TAP1", "TATDN1", "TBL1XR1", "TBL3", "TCP1", "TFB1M", "THOC6", "TK1", "TLE3", "TLN1", "TM7SF2", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM13", "TRIM21", "TRIM24", "TRIM25", "TRIM27", "TRIM28", "TRIM32", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUBG1", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBA5", "UBFD1", "UHRF1", "USP1", "USP10", "USP11", "USP14", "USP15", "USP19", "USP22", "USP24", "USP28", "USP38", "USP47", "USP48", "USP5", "USP7", "USP8", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WARS2", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR5", "WDR61", "WDR7", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ABR", "AFG3L2", "AK3", "AK4", "BAZ1A", "BAZ1B", "BCR", "BPTF", "BRD2", "BRD3", "BRD4", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT8", "CDH2", "CHD1", "COPZ1", "CTBP1", "CTBP2", "CWC27", "DDX20", "DDX23", "DDX27", "DDX42", "DDX46", "DDX54", "DHCR7", "DIDO1", "DNAJA3", "DNAJB1", "DNAJB12", "DNAJB6", "DNAJC2", "DNAJC21", "DNAJC9", "DNM2", "EEF1D", "ENO2", "EPB41L2", "EPB41L3", "FLNA", "FLNB", "FLNC", "GGPS1", "GRHPR", "HADHB", "HGS", "HLTF", "HMGA1", "HMGB2", "HSP90AA1", "HSP90AB1", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HYOU1", "IDH2", "IMPDH1", "IQGAP3", "ITGA2", "KATNA1", "KDM2A", "KIF18B", "KIF20B", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF5B", "LBR", "LMNB2", "MCM4", "MID1", "MPP5", "MRPS11", "MRPS5", "MTHFD1L", "MTHFD2", "NEFM", "NES", "NKTR", "NOTCH2", "NSD1", "NVL", "OSBP", "PBRM1", "PCDH7", "PDIA3", "PDIA4", "PDSS1", "PGM2", "PGM3", "PHF14", "PHF3", "PLOD1", "PMS1", "PPIG", "PPIL1", "PPIL2", "PSMC1", "PSMC2", "PSMC3", "PSMC5", "PSMC6", "PYGL", "RNF2", "RNF40", "RPL13A", "RPL26", "RPL3", "RPL7A", "RSF1", "RSL24D1", "S100A10", "SCAF11", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SRCAP", "TCP1", "TLN1", "TRIM13", "TRIM27", "TRIM32", "TXNDC5", "UBA2", "USP22", "USP8", "UTRN", "VCL", "VCP", "VPS4A", "XPNPEP1", "YME1L1", "ZADH2"]}

interpro_domain/advanced/idx2term.json

@@ -0,0 +1 @@
+{"0": "RNA recognition motif domain [IPR000504]", "1": "Zinc finger C2H2-type [IPR013087]", "2": "K Homology domain, type 1 [IPR004088]", "3": "K Homology domain [IPR004087]", "4": "SAP domain [IPR003034]", "5": "RNA recognition motif domain, eukaryote [IPR003954]", "6": "Myosin head, motor domain [IPR001609]", "7": "Linker histone H1/H5, domain H15 [IPR005818]", "8": "SH3 domain [IPR001452]", "9": "Matrin/U1-C-like, C2H2-type zinc finger [IPR003604]"}