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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +6 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/basic/plot_0.png +3 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +1 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +6 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +1 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +19 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/advanced/plot_0.png +3 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +4 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +166 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/advanced/plot_0.png +3 -0
- interpro_family/basic/idx2term.json +1 -0
- interpro_family/basic/plot_0.png +3 -0
- interpro_family/basic/plot_1.png +3 -0
- interpro_family/basic/plot_2.png +3 -0
- interpro_family/basic/plot_3.png +3 -0
- interpro_family/basic/plot_4.png +3 -0
- interpro_family/consensus.joblib +3 -0
- interpro_family/df_merge.tsv +2 -0
interpro_active_site/advanced/idx2term.json
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{}
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interpro_active_site/basic/idx2term.json
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{}
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:ebcab3ddfcead15dcc8cbf8fea0e6f03d43acd7e4760a52fe4e8f2e3d10d2c67
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size 62961
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 53,
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"title": "Average number of proteins per term",
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"value": 2.452830188679245
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C197/C197_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Serine carboxypeptidase, serine active site [IPR018202] 0.96895115486558 2.025622031583909 0.0428035320636541 0.9015858305052008 0.2423560950063112 3 P10619,Q9HB40 2
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Cysteine peptidase, asparagine active site [IPR025661] 0.9678274034822096 1.6054864449286408 0.1083867939046254 0.997712536901202 0.2735476227116737 2 P07858 1
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Cysteine peptidase, histidine active site [IPR025660] 0.9678274034822096 1.6054864449286408 0.1083867939046254 0.997712536901202 0.2735476227116737 2 P07858 1
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Cysteine peptidase, cysteine active site [IPR000169] 0.6836532573572689 1.3235651481482615 0.1856475063388796 0.9999812475152506 0.3392868219296765 5 P07858 1
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Tyrosine-protein kinase, active site [IPR008266] 0.6741106120351807 0.8504098828058042 0.3950972434941238 0.9999999999973126 0.5890988630099769 3 Q15375 1
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interpro_active_site/selections.json
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{"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 18 (GH18) active site [IPR001579]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CDC34", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CHUK", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CTBS", "CTSA", "CTSB", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAPK1", "MDH1", "MDH2", "MTMR2", "MTMR6", "NEK9", "NME1", "NME6", "PAK1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN2", "PLK1", "PREP", "PRKCD", "PRPF4B", "PTK7", "PTPN1", "PTPN11", "RNASET2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TRIO", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "VRK1"], "leading_proteins": ["CTSA", "CTSB", "EPHA7", "SCPEP1"]}
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interpro_binding_site/advanced/idx2term.json
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{}
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interpro_binding_site/basic/idx2term.json
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{"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
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interpro_binding_site/basic/plot_0.png
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Git LFS Details
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:8dceb74b8a1e02fbfe6ef5b0c3e0e77b8a6cf9e48323c3e0f8dd9adb2fe463f3
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size 59682
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 27,
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"title": "Average number of proteins per term",
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"value": 4.555555555555555
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C197/C197_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Peptidase M16, zinc-binding site [IPR001431] 0.550204081932839 0.7504411896985915 0.4529890312535802 0.9999999156873104 0.7644189902404167 5 Q10713 1
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Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917] 0.7214231642694893 0.6358794443507858 0.5248550014985356 0.9999999981193568 0.8335932376741447 2 O15270 1
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Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798] 0.6797880393641134 0.4966097397257876 0.6194642834950328 0.9999999999953152 0.8363335406030687 2 P34896 1
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EF-Hand 1, calcium-binding site [IPR018247] 0.3562309814657868 0.2721992167303835 0.7854688440664694 1.0 0.9343449204584972 38 P80303,Q14257,O43852,Q9Y680,Q02818 5
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Hexokinase, binding site [IPR019807] 0.3050719152157387 0.0386802528548032 0.9691453175646784 1.0 0.9691453175646784 2 P52789 1
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "APEX2", "AURKA", "BPNT1", "CALM3", "CALU", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CETN2", "CHUK", "COX2", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CYB5B", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "EPS15L1", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "LETM1", "MACF1", "MAP2K1", "MAPK1", "MCCC1", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1C", "MYO1D", "NRDC", "NUCB1", "NUCB2", "OXSR1", "PA2G4", "PAK1", "PAK2", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKMYT1", "PKN2", "PLCG1", "PLK1", "PLS3", "PMPCA", "PMPCB", "PPM1G", "PRKCD", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["CALU", "FKBP7", "HK2", "NUCB1", "NUCB2", "PMPCA", "RCN2", "SHMT1", "SPTLC2"]}
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interpro_conserved_site/advanced/idx2term.json
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{}
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interpro_conserved_site/basic/idx2term.json
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{"0": "Proteasome beta-type subunit, conserved site [IPR016050]"}
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interpro_conserved_site/basic/plot_0.png
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Git LFS Details
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:110612cbeae940bc8c48ff0c86e720f35e4a21d67f67b9c5f32b65d3d56a4bb2
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size 63794
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 265,
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"title": "Average number of proteins per term",
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"value": 2.4754716981132074
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C197/C197_val_log2fc"}
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interpro_conserved_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Proteasome beta-type subunit, conserved site [IPR016050] 0.7561484137832274 1.9447159348381005 0.0518091766137511 0.9999992459967963 0.5562678490990643 8 P20618,Q99436,P49720,P49721,P28072,P28070 6
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Immunoglobulin/major histocompatibility complex, conserved site [IPR003006] 0.9341158652025732 1.8881764148678863 0.0590022709750188 0.9999998997758324 0.5562678490990643 3 P55899,P01889 2
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Tetraspanin, conserved site [IPR018503] 0.992429977289932 1.7061448728448674 0.0879811096363463 0.9999999999748224 0.5562678490990643 2 O43657 1
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Syntaxin/epimorphin, conserved site [IPR006012] 0.7988335802723473 1.6606998525033425 0.0967737430522515 0.9999999999980675 0.5562678490990643 4 O15400,Q9P2W9 2
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Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744] 0.9746404239212711 1.6333779899592 0.1023895232075535 0.99999999999963 0.5562678490990643 2 P05067 1
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Proteinase inhibitor I2, Kunitz, conserved site [IPR020901] 0.9746404239212711 1.6333779899592 0.1023895232075535 0.99999999999963 0.5562678490990643 2 P05067 1
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Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745] 0.9746404239212711 1.6333779899592 0.1023895232075535 0.99999999999963 0.5562678490990643 2 P05067 1
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| 9 |
+
Glycoside hydrolase, family 29, conserved site [IPR018526] 0.9682059046177132 1.60703621727939 0.108046423516257 0.9999999999999308 0.5614176908197669 2 Q9BTY2 1
|
| 10 |
+
Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818] 0.7701371634676966 1.5411513637949172 0.123279951382424 0.9999999999999992 0.5731436336200418 4 P48735 1
|
| 11 |
+
Sterol reductase, conserved site [IPR018083] 0.9333838001513992 1.464430138431451 0.1430764583892956 1.0 0.6072414577739758 2 Q9UBM7 1
|
| 12 |
+
Chromo domain, conserved site [IPR023779] 0.6716774240018573 1.1279760621370991 0.2593300288024456 1.0 0.738951157340302 4 P45973,P83916 2
|
| 13 |
+
Haem oxygenase conserved site [IPR018207] 0.8277819833459477 1.0368523369703433 0.2998046798528184 1.0 0.7872744429344776 2 P30519 1
|
| 14 |
+
3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.8118849356548048 0.9741390919397898 0.3299874818228634 1.0 0.7949698425732619 2 Q16836 1
|
| 15 |
+
Acyl-CoA-binding protein, ACBP, conserved site [IPR022408] 0.7339137017411017 0.6800896718731139 0.4964476836801856 1.0 0.9342032980858536 2 O75521 1
|
| 16 |
+
Profilin conserved site [IPR027310] 0.6616199848599492 0.4404156182303438 0.6596361151342682 1.0 0.9604591786295664 2 P35080 1
|
| 17 |
+
Cadherin conserved site [IPR020894] 0.5231767518201947 0.3400572383522252 0.7338134236140064 1.0 0.9640891206444152 3 Q14574 1
|
| 18 |
+
Ribosomal protein S9, conserved site [IPR020574] 0.4330052990158922 0.0589751132933608 0.9529719303163844 1.0 1.0 2 P82933 1
|
| 19 |
+
Ribosomal protein S5, N-terminal, conserved site [IPR018192] 0.369417108251315 0.0426025975062169 0.9660183248613908 1.0 1.0 2 P82675 1
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Aldose 1-epimerase, conserved site [IPR018052]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA mismatch repair, conserved site [IPR014762]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Heavy-metal-associated, conserved site [IPR017969]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RIO kinase, conserved site [IPR018935]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Rel homology domain, conserved site [IPR030492]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Uncharacterised protein family UPF0029, Impact, conserved site [IPR020569]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACTL6A", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP1S2", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APLP2", "APP", "ARIH2", "ARSA", "ATAD1", "ATP5C1", "ATP5O", "ATP7B", "BAG6", "BAZ1A", "BAZ1B", "BCS1L", "BOP1", "BPNT1", "BPTF", "BRD1", "BRD2", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBL", "CBR1", "CBX1", "CBX2", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDX2", "CETN2", "CHAF1B", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1A", "CORO1C", "CORO7", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CYP51A1", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHFR", "DHRS7", "DHX15", "DHX16", "DHX29", "DHX30", "DHX36", "DHX8", "DHX9", "DIDO1", "DIMT1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DPY30", "DRG1", "DRG2", "DSC1", "DSC3", "DSG2", "DST", "DTYMK", "DYNLL1", "ECH1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A3", "EIF4E", "ENO1", "ENO2", "EPB41", "EPB41L2", "EPB41L5", "EPDR1", "EPHA7", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FCGRT", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FUCA1", "FUCA2", "GAA", "GALK1", "GALM", "GANAB", "GART", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPB", "GNPDA1", "GNS", "GPI", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "GUF1", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HIBADH", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPACT", "IMPDH1", "IMPDH2", "INA", "IQGAP1", "IVD", "KDSR", "KIF11", "KIF18B", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF4A", "KIF5B", "KIF7", "KIFC1", "LAMP1", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "MGST2", "MID1", "MIF", "MKRN2", "MPI", "MPP6", "MPST", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "MVK", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NTHL1", "NUBP2", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF14", "PHF8", "PHGDH", "PHIP", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLRG1", "PLS3", "PNP", "POLA1", "POLD1", "POLR1B", "POLR2B", "POLR2C", "PPIB", "PPID", "PPIF", "PPIG", "PPIH", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RBBP4", "RBBP7", "RCL1", "RDH13", "RDX", "RELA", "RIDA", "RIOK2", "RNF2", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RSF1", "RSL24D1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC25A42", "SLC27A2", "SLC27A4", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STX18", "STX4", "STX5", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SYNE2", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TMX1", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRAF2", "TRIM21", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TSFM", "TSPAN3", "TSPAN6", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UHRF1", "USP10", "USP11", "USP14", "USP24", "USP28", "USP34", "USP47", "USP48", "USP5", "USP7", "USP8", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["APP", "CBX1", "CBX5", "DHCR7", "DSC3", "ECI2", "FCGRT", "FUCA2", "HADH", "HLA-B", "HMOX2", "IDH2", "MRPS5", "MRPS9", "PFN2", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB6", "PSMB7", "STX18", "STX7", "TSPAN6"]}
|
interpro_domain/advanced/idx2term.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"0": "Immunoglobulin-like domain [IPR007110]"}
|
interpro_domain/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
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| 1 |
+
{"0": "Immunoglobulin-like domain [IPR007110]", "1": "K Homology domain, type 1 [IPR004088]", "2": "K Homology domain [IPR004087]", "3": "RNA recognition motif domain [IPR000504]", "4": "EF-hand domain [IPR002048]"}
|
interpro_domain/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_2.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_3.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_4.png
ADDED
|
Git LFS Details
|
interpro_domain/consensus.joblib
ADDED
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| 1 |
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version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:10c03b48de6525da8eebe70d208772d0253a5cfcbeba532effbd249750f2727c
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| 3 |
+
size 114035
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interpro_domain/df_merge.tsv
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| 1 |
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Immunoglobulin-like domain [IPR007110] 6 8 2.160187820201851 0.0307581326578179 4.480582524271845 12.427184466019416 0.4075261998509777 0.4433674298264088 2.6479725987944898 3.173316973839475 1.1756568118942026 0.3233613924696422 0.4905798305311465 1.0 0.2961867551178612 0.1392614494667218 0.3074046968153315
|
| 3 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 3 5 1.9992599546240293 0.0455802345866265 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.0125560894119173 0.0561990347849709 0.1094892401774078 0.000142755965642 0.0001560226497295
|
| 4 |
+
Band 7 domain [IPR001107] 3 8 1.9887346361279348 0.046730500813708 3.825242718446602 7.354368932038835 0.2848798017769268 0.3662852929750465 1.8717479731706237 0.7075565364256523 1.25010454777189 0.3076860385713043 0.1233512907074988 0.0424464003246627 0.0832836732680532 0.0188064524051028 0.0005644670723367
|
interpro_domain/metrics.json
ADDED
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@@ -0,0 +1,7 @@
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| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2644,
|
| 4 |
+
"annotations_size": 2312,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.0666089965397925
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
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|
| 1 |
+
{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C197/C197_val_log2fc"}
|
interpro_domain/result.tsv
ADDED
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@@ -0,0 +1,166 @@
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|
| 1 |
+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Immunoglobulin C1-set [IPR003597] 0.9344696969696976 2.211935000685298 0.0269711564275496 1.0 0.5982949461849505 4 P55899,P01889,P10321 3
|
| 3 |
+
MHC class I-like antigen recognition-like [IPR011161] 0.9344696969696976 2.211935000685298 0.0269711564275496 1.0 0.5982949461849505 4 P55899,P01889,P10321 3
|
| 4 |
+
Immunoglobulin-like domain [IPR007110] 0.8037005606618264 2.160187820201851 0.0307581326578179 1.0 0.5982949461849505 8 P01889,P35613,P04439,P78310,P10321,P55899 6
|
| 5 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8431482253799534 1.9992599546240295 0.0455802345866265 1.0 0.5982949461849505 5 O15173,Q9UMX5,O43169 3
|
| 6 |
+
Band 7 domain [IPR001107] 0.7657695270150455 1.9887346361279348 0.046730500813708 1.0 0.5982949461849505 8 O75955,P27105,Q14254 3
|
| 7 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 0.8310580844152108 1.9493511842688092 0.0512534999439111 1.0 0.5982949461849505 5 P09960,Q9UIQ6,P55786 3
|
| 8 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.8310580844152108 1.9493511842688092 0.0512534999439111 1.0 0.5982949461849505 5 P09960,Q9UIQ6,P55786 3
|
| 9 |
+
Dynamin, N-terminal [IPR045063] 0.8113959079505944 1.9104530777926176 0.0560749023756035 1.0 0.5982949461849505 6 Q9H4M9,Q9H223,O00429 3
|
| 10 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.8113959079505944 1.9104530777926176 0.0560749023756035 1.0 0.5982949461849505 6 Q9H4M9,Q9H223,O00429 3
|
| 11 |
+
MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.9341158652025732 1.8881764148678863 0.0590022709750188 1.0 0.5982949461849505 3 P01889,P10321 2
|
| 12 |
+
MHC class I, alpha chain, C-terminal [IPR010579] 0.9341158652025732 1.8881764148678863 0.0590022709750188 1.0 0.5982949461849505 3 P01889,P10321 2
|
| 13 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.9038243089738752 1.7676347695050647 0.0771219814406947 1.0 0.5982949461849505 3 Q15629,Q96G23 2
|
| 14 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.7790829859795405 1.7320628259576831 0.0832623770267044 1.0 0.5982949461849505 5 P05023,P35670,Q9HD20,P16615 4
|
| 15 |
+
ERAP1-like C-terminal domain [IPR024571] 0.8924649753881135 1.722217686459327 0.0850300921202895 1.0 0.5982949461849505 3 P55786,Q9UIQ6 2
|
| 16 |
+
Fxr1, tudor domain [IPR041560] 0.88034835289663 1.6736605745703517 0.0941973263089877 1.0 0.5982949461849505 3 Q06787,P51116 2
|
| 17 |
+
Fragile X-related 1 protein, C-terminal core [IPR022034] 0.88034835289663 1.6736605745703517 0.0941973263089877 1.0 0.5982949461849505 3 Q06787,P51116 2
|
| 18 |
+
Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.88034835289663 1.6736605745703517 0.0941973263089877 1.0 0.5982949461849505 3 Q06787,P51116 2
|
| 19 |
+
Agenet-like domain [IPR008395] 0.88034835289663 1.6736605745703517 0.0941973263089877 1.0 0.5982949461849505 3 Q06787,P51116 2
|
| 20 |
+
START domain [IPR002913] 0.8755941979381814 1.6545795318796603 0.0980098182357762 1.0 0.5982949461849505 3 Q9NQZ5 1
|
| 21 |
+
Pancreatic trypsin inhibitor Kunitz domain [IPR002223] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 22 |
+
Amyloidogenic glycoprotein, copper-binding [IPR011178] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 23 |
+
Amyloidogenic glycoprotein, extracellular [IPR008154] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 24 |
+
Beta-amyloid precursor protein C-terminal [IPR019543] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 25 |
+
Amyloidogenic glycoprotein, heparin-binding [IPR015849] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 26 |
+
Amyloidogenic glycoprotein, E2 domain [IPR024329] 0.9746404239212711 1.6333779899592 0.1023895232075535 1.0 0.5982949461849505 2 P05067 1
|
| 27 |
+
Zinc finger, CHHC-type [IPR012996] 0.8686103748580098 1.6265226985986567 0.1038385086903437 1.0 0.5982949461849505 3 P31943,P52597 2
|
| 28 |
+
Alpha-L-fucosidase, C-terminal [IPR031919] 0.9682059046177132 1.60703621727939 0.108046423516257 1.0 0.6023421129028675 2 Q9BTY2 1
|
| 29 |
+
Peptidase C1A, papain C-terminal [IPR000668] 0.9678274034822096 1.6054864449286408 0.1083867939046254 1.0 0.6023421129028675 2 P07858 1
|
| 30 |
+
MD-2-related lipid-recognition domain [IPR003172] 0.9647993943981829 1.5930874182888344 0.111140581450198 1.0 0.6089029012153029 2 P61916 1
|
| 31 |
+
RNA recognition motif domain, eukaryote [IPR003954] 0.5881423170224857 1.5805428766113494 0.1139825958296023 1.0 0.6164913794160536 12 Q9UHX1,Q14011,O95628,Q01085 4
|
| 32 |
+
PA domain [IPR003137] 0.9610143830431483 1.5775868484436604 0.1146605556892148 1.0 0.6171649997878655 2 Q8TCT8 1
|
| 33 |
+
Glycoside hydrolase family 2, catalytic domain [IPR006103] 0.9598788796366382 1.5729363714925944 0.1157335521839577 1.0 0.6171649997878655 2 O00462 1
|
| 34 |
+
Glycoside hydrolase family 20, catalytic domain [IPR015883] 0.9572293716881142 1.562084850936088 0.1182680011726575 1.0 0.6171649997878655 2 P06865 1
|
| 35 |
+
Beta-hexosaminidase, eukaryotic type, N-terminal [IPR029019] 0.9572293716881142 1.562084850936088 0.1182680011726575 1.0 0.6171649997878655 2 P06865 1
|
| 36 |
+
MRH domain [IPR044865] 0.8479833939340822 1.5434959646980693 0.1227104858284633 1.0 0.6205891266344203 3 P11717 1
|
| 37 |
+
Isopropylmalate dehydrogenase-like domain [IPR024084] 0.7701371634676966 1.5411513637949172 0.123279951382424 1.0 0.6205891266344203 4 P48735 1
|
| 38 |
+
Target SNARE coiled-coil homology domain [IPR000727] 0.7293681958821134 1.5205083181201673 0.1283832697613975 1.0 0.622699175890074 5 O15400,Q9UNK0 2
|
| 39 |
+
CBS domain [IPR000644] 0.7145108970650725 1.4966722028811237 0.1344785725505868 1.0 0.622699175890074 6 P51798,Q6P4Q7,P51790 3
|
| 40 |
+
Phospholipase D/Transphosphatidylase [IPR001736] 0.9375473126419368 1.481475993437278 0.1384797774611024 1.0 0.622699175890074 2 Q8IV08 1
|
| 41 |
+
BTB/POZ domain [IPR000210] 0.8235516849678292 1.4449412578841871 0.1484743862174127 1.0 0.622699175890074 3 Q9NXV2,Q08380 2
|
| 42 |
+
Marvel domain [IPR008253] 0.922785768357304 1.4210622126746937 0.1552986740860884 1.0 0.6294953490441882 2 Q16625 1
|
| 43 |
+
Transcription factor CBF/NF-Y/archaeal histone domain [IPR003958] 0.7355038235095461 1.3960314980923407 0.1627050102061287 1.0 0.6395228965444812 4 Q9NR33,Q01658 2
|
| 44 |
+
Immunoglobulin subtype 2 [IPR003598] 0.7258354780772105 1.3554165443123911 0.175284881466101 1.0 0.6401953721888786 4 P78310,P35613 2
|
| 45 |
+
Immunoglobulin subtype [IPR003599] 0.7258354780772105 1.3554165443123911 0.175284881466101 1.0 0.6401953721888786 4 P78310,P35613 2
|
| 46 |
+
GNAT domain [IPR000182] 0.7206818115920142 1.333757417134934 0.1822833707455284 1.0 0.6401953721888786 4 Q86UY6 1
|
| 47 |
+
SET domain [IPR001214] 0.7947747065505514 1.328786544623126 0.1839184025874338 1.0 0.6401953721888786 3 Q03164,Q9H7B4 2
|
| 48 |
+
K Homology domain, type 1 [IPR004088] 0.4981188804121305 1.2954764245837749 0.1951559289806443 1.0 0.6529674497876263 22 Q92945,Q07666,Q96I24,Q96AE4,P51116,P51114,Q06787 7
|
| 49 |
+
Zinc finger, RanBP2-type [IPR001876] 0.6178031385446371 1.290308109169367 0.1969437024696767 1.0 0.6570144466148349 8 P35637,Q01844 2
|
| 50 |
+
N-acetylgalactosaminyltransferase [IPR045885] 0.782658084059069 1.279933250392116 0.2005686124058021 1.0 0.6615044677349708 3 Q10472,Q10471 2
|
| 51 |
+
Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.778492995077626 1.2631556986540955 0.2065332302856997 1.0 0.6668245861351374 3 P05023,P16615 2
|
| 52 |
+
Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.778492995077626 1.2631556986540955 0.2065332302856997 1.0 0.6668245861351374 3 P05023,P16615 2
|
| 53 |
+
Flavoprotein pyridine nucleotide cytochrome reductase [IPR001709] 0.7771433997231343 1.2577214681048234 0.2084925054638313 1.0 0.6668245861351374 3 P16435 1
|
| 54 |
+
Oxidoreductase FAD/NAD(P)-binding [IPR001433] 0.7771433997231343 1.2577214681048234 0.2084925054638313 1.0 0.6668245861351374 3 P16435 1
|
| 55 |
+
FAD-binding domain, ferredoxin reductase-type [IPR017927] 0.7771433997231343 1.2577214681048234 0.2084925054638313 1.0 0.6668245861351374 3 P16435 1
|
| 56 |
+
Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.8800151400454199 1.2466963853061617 0.2125088447303125 1.0 0.6695137752103392 2 P51116 1
|
| 57 |
+
CARG-binding factor, N-terminal [IPR012956] 0.8781226343679036 1.239018875910164 0.2153385077699752 1.0 0.6722488610715363 2 Q99729 1
|
| 58 |
+
EH domain-containing protein, N-terminal [IPR031692] 0.8762301286903866 1.2313456423313394 0.2181936179797508 1.0 0.6762247248916673 2 Q9H223 1
|
| 59 |
+
Domain of unknown function DUF5600 [IPR040990] 0.8762301286903866 1.2313456423313394 0.2181936179797508 1.0 0.6762247248916673 2 Q9H223 1
|
| 60 |
+
Peptidase M16, C-terminal [IPR007863] 0.6295116526161347 1.2287336160102211 0.2191716981260587 1.0 0.6765353352035351 7 Q5JRX3,Q10713 2
|
| 61 |
+
Peptidase M16, N-terminal [IPR011765] 0.6295116526161347 1.2287336160102211 0.2191716981260587 1.0 0.6765353352035351 7 Q5JRX3,Q10713 2
|
| 62 |
+
Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.8743376230128685 1.223676827138079 0.2210741646842797 1.0 0.6787828270253051 2 O60506 1
|
| 63 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.5756018692741155 1.2053310670582535 0.2280755209276304 1.0 0.6871414341396783 9 P62942,Q9Y680,Q9NWM8,Q96AY3 4
|
| 64 |
+
Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.8663890991672962 1.1915193486791418 0.2334497654755094 1.0 0.6919690484350998 2 Q32P28 1
|
| 65 |
+
K Homology domain [IPR004087] 0.4804086074272598 1.1770108204068617 0.2391911874784231 1.0 0.6977171693039659 22 Q92945,Q07666,Q96I24,Q96AE4,P51116,P51114,Q06787 7
|
| 66 |
+
Major facilitator superfamily domain [IPR020846] 0.7493373722075025 1.1460792371618254 0.2517623677300822 1.0 0.7039858405153155 3 Q9H2V7,P53985 2
|
| 67 |
+
Chromo shadow domain [IPR008251] 0.7383566830745956 1.1022211527052397 0.2703655380757939 1.0 0.7115983071132126 3 P45973,P83916 2
|
| 68 |
+
Chromo domain subgroup [IPR017984] 0.7383566830745956 1.1022211527052397 0.2703655380757939 1.0 0.7115983071132126 3 P45973,P83916 2
|
| 69 |
+
CYRIA/CYRIB, Rac1 binding domain [IPR009828] 0.8440575321725965 1.101700748682816 0.2705917913733797 1.0 0.7115983071132126 2 Q9NUQ9 1
|
| 70 |
+
Heat shock protein DnaJ, cysteine-rich domain [IPR001305] 0.7364192222869907 1.0945001923560076 0.2737356630580589 1.0 0.7115983071132126 3 Q96EY1 1
|
| 71 |
+
PTBP1, RNA recognition motif 2-like [IPR021790] 0.6628787878787937 1.0911715330377922 0.2751974114404318 1.0 0.7115983071132126 4 Q8WVV9,Q9UKA9,P14866 3
|
| 72 |
+
Ricin B, lectin domain [IPR000772] 0.6549816550160632 1.0582100768556923 0.2899596781999363 1.0 0.7225593016562613 4 Q10472,Q10471 2
|
| 73 |
+
Zinc finger C2H2 AKAP95-type [IPR034736] 0.7270845438820368 1.0573840927213007 0.2903363283904268 1.0 0.7225593016562613 3 Q5BKZ1 1
|
| 74 |
+
Tim44-like domain [IPR007379] 0.8323239969719902 1.054889526970879 0.2914758526542318 1.0 0.7244009150517877 2 O43615 1
|
| 75 |
+
Guanylate kinase-like domain [IPR008144] 0.7238024831375997 1.0443696621774132 0.2963143941351092 1.0 0.725082990034074 3 Q9NZW5 1
|
| 76 |
+
Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.7238024831375997 1.0443696621774132 0.2963143941351092 1.0 0.725082990034074 3 Q9NZW5 1
|
| 77 |
+
Potassium channel tetramerisation-type BTB domain [IPR003131] 0.8232399697199084 1.0188657332601123 0.3082667137087695 1.0 0.7385623234141713 2 Q9NXV2 1
|
| 78 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.8126419379258122 0.9771095773183252 0.3285149068139761 1.0 0.7578014084126786 2 Q92945 1
|
| 79 |
+
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.8118849356548048 0.9741390919397898 0.3299874818228634 1.0 0.7578014084126786 2 Q16836 1
|
| 80 |
+
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.8118849356548048 0.9741390919397898 0.3299874818228634 1.0 0.7578014084126786 2 Q16836 1
|
| 81 |
+
Glycosyltransferase 2-like [IPR001173] 0.6316713797549103 0.961455828033624 0.3363230251913669 1.0 0.7632489572941026 4 Q10472,Q10471 2
|
| 82 |
+
Exportin-2, central domain [IPR013713] 0.7015238331465441 0.9566115124417898 0.3387633758784831 1.0 0.7671115818129804 3 O95373 1
|
| 83 |
+
Glycerol-3-phosphate acyltransferase-like, C-terminal domain [IPR045520] 0.8035579106737301 0.9415782221865548 0.3464086238279764 1.0 0.7744208468514083 2 Q9HCL2 1
|
| 84 |
+
GPAT/DHAPAT, acyltransferase domain [IPR041728] 0.8035579106737301 0.9415782221865548 0.3464086238279764 1.0 0.7744208468514083 2 Q9HCL2 1
|
| 85 |
+
Post-SET domain [IPR003616] 0.7944738834216487 0.906312769637629 0.3647703284919377 1.0 0.7849371362953258 2 Q03164 1
|
| 86 |
+
Reticulon [IPR003388] 0.7929598788796335 0.9004628709366863 0.3678739757452396 1.0 0.7887959731964711 2 O95197 1
|
| 87 |
+
Amino acid permease/ SLC12A domain [IPR004841] 0.7831188493565462 0.8626450464359732 0.3883326551573787 1.0 0.7970964393274065 2 P55011 1
|
| 88 |
+
SLC12A transporter, C-terminal [IPR018491] 0.7831188493565462 0.8626450464359732 0.3883326551573787 1.0 0.7970964393274065 2 P55011 1
|
| 89 |
+
Serine-threonine/tyrosine-protein kinase, catalytic domain [IPR001245] 0.6741106120351807 0.8504098828058042 0.3950972434941238 1.0 0.8005826704280581 3 Q15375 1
|
| 90 |
+
RBM3/CIRBP, RNA recognition motif [IPR034278] 0.7713853141559402 0.8180592364254196 0.4133233636655531 1.0 0.8093541389951123 2 Q14011 1
|
| 91 |
+
RNA recognition motif domain [IPR000504] 0.3639943811704467 0.7158275195577659 0.4740978575684262 1.0 0.8457671656621925 100 Q8IXT5,P31942,Q96PK6,P52597,Q01844,P22626,P35637,P31943,O95628,Q13151,Q99729,Q9UHX1,Q92804,O14979,Q14103,Q01085,P51991,Q14011,O43390,P38159,Q9UKA9,P55795,Q8IY67,O60506,Q9BWF3 25
|
| 92 |
+
Acyl-CoA-binding protein, ACBP [IPR000582] 0.7339137017411017 0.6800896718731139 0.4964476836801856 1.0 0.8538947206285513 2 O75521 1
|
| 93 |
+
Legume-like lectin [IPR005052] 0.7259651778955301 0.6518401128286335 0.5145043216670095 1.0 0.8637684792114707 2 P49257 1
|
| 94 |
+
NOPS [IPR012975] 0.6149185914426284 0.6313822993835742 0.5277905867739463 1.0 0.8641492530884108 3 P23246,Q15233 2
|
| 95 |
+
Peptidase M3A/M3B catalytic domain [IPR001567] 0.6145431023771605 0.6300523484630068 0.5286603349790446 1.0 0.8641492530884108 3 Q9BYT8 1
|
| 96 |
+
Tudor domain [IPR002999] 0.5149167752618382 0.6257230028769644 0.5314966426867302 1.0 0.8641492530884108 6 Q14739 1
|
| 97 |
+
Survival motor neuron [IPR010304] 0.7142316426949243 0.6108926153903019 0.5412706739518238 1.0 0.8739558691748792 2 Q16637 1
|
| 98 |
+
HDGF-related, PWWP domain [IPR035496] 0.6084816357440384 0.6087083426126049 0.542717776274311 1.0 0.8748194466118253 3 P51858,Q7Z4V5 2
|
| 99 |
+
Major sperm protein (MSP) domain [IPR000535] 0.6009087466868532 0.5823865879934066 0.5603063134944588 1.0 0.8887818428510963 3 Q8NHP6,Q9P0L0 2
|
| 100 |
+
Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.5347365726304029 0.5773516396518049 0.5637019360482478 1.0 0.8887818428510963 4 Q32P28 1
|
| 101 |
+
Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.5347365726304029 0.5773516396518049 0.5637019360482478 1.0 0.8887818428510963 4 Q32P28 1
|
| 102 |
+
CTP synthase GATase domain [IPR033828] 0.7009841029523046 0.5658329637822342 0.5715073356616662 1.0 0.8921843079336748 2 P17812 1
|
| 103 |
+
CTP synthase, N-terminal [IPR017456] 0.7009841029523046 0.5658329637822342 0.5715073356616662 1.0 0.8921843079336748 2 P17812 1
|
| 104 |
+
TGS [IPR004095] 0.4987083532321295 0.5584235444967534 0.5765551990525675 1.0 0.8964328313446779 6 Q9NTK5 1
|
| 105 |
+
R3H domain [IPR001374] 0.5861416130253636 0.5322458035548973 0.5945557632144713 1.0 0.9130183026087516 3 O95453,Q9H6S0 2
|
| 106 |
+
OCRE domain [IPR041591] 0.6896290688872021 0.5282856745210791 0.5973010729632573 1.0 0.9157560216784156 2 P52756 1
|
| 107 |
+
LEM-like domain [IPR013146] 0.6888720666161954 0.5258198213208154 0.5990134012888673 1.0 0.917164889920438 2 P42167 1
|
| 108 |
+
SKP1 component, POZ domain [IPR016073] 0.6828160484481407 0.5062673640725357 0.612668970434346 1.0 0.920720926747568 2 P63208 1
|
| 109 |
+
Serine hydroxymethyltransferase-like domain [IPR039429] 0.6797880393641134 0.4966097397257876 0.6194642834950328 1.0 0.9238371433518816 2 P34896 1
|
| 110 |
+
ELMO domain [IPR006816] 0.6688115064345141 0.4622905062001506 0.6438730068882719 1.0 0.9385057441616126 2 Q8IZ81 1
|
| 111 |
+
NLE [IPR012972] 0.6582134746404185 0.4302290896118792 0.667029003385041 1.0 0.9545546847348 2 Q9GZL7 1
|
| 112 |
+
ATPase family AAA domain-containing protein 3, N-terminal [IPR021911] 0.6551854655563911 0.4212712259258311 0.6735570390574908 1.0 0.9575628230287592 2 Q9NVI7 1
|
| 113 |
+
Zinc finger, CCHC-type [IPR001878] 0.4484568444761162 0.4133980230786602 0.6793150228002898 1.0 0.960009983321681 7 Q9NUD5 1
|
| 114 |
+
SAM-dependent methyltransferase RsmB/NOP2-type [IPR001678] 0.5347018581451038 0.3722410803092374 0.7097133625067416 1.0 0.9735050154641008 3 Q96P11 1
|
| 115 |
+
LEM domain [IPR003887] 0.4504976213742251 0.3683910390597127 0.7125816781821339 1.0 0.9754226405903456 6 Q86XL3 1
|
| 116 |
+
G-protein, beta subunit [IPR001632] 0.6294473883421587 0.3490031021897213 0.7270869806208693 1.0 0.9806610765493814 2 Q9NVX2 1
|
| 117 |
+
Cadherin-like [IPR002126] 0.5231767518201947 0.3400572383522252 0.7338134236140064 1.0 0.980827925789202 3 Q14574 1
|
| 118 |
+
SCP2 sterol-binding domain [IPR003033] 0.5164710336993535 0.3220276907058437 0.7474317168345703 1.0 0.980827925789202 3 P51659,Q6YN16 2
|
| 119 |
+
Exocyst complex component EXOC2/Sec5, N-terminal domain [IPR039481] 0.6139288417865186 0.3089960399311613 0.7573245392001511 1.0 0.980827925789202 2 Q9UID3 1
|
| 120 |
+
Chromo domain [IPR023780] 0.4339897600668437 0.306671579329375 0.7590933644565205 1.0 0.980827925789202 5 P45973,P83916 2
|
| 121 |
+
DNA2/NAM7 helicase-like, C-terminal [IPR041679] 0.4515847427479421 0.2988995163619052 0.7650167161347798 1.0 0.980827925789202 4 Q9HCE1,O60306 2
|
| 122 |
+
Lens epithelium-derived growth factor, integrase-binding domain [IPR021567] 0.6082513247539674 0.2950687930911773 0.7679413284341223 1.0 0.980827925789202 2 Q7Z4V5 1
|
| 123 |
+
Histone-binding protein RBBP4, N-terminal [IPR022052] 0.4884513441878082 0.2525947139483202 0.8005814152465338 1.0 0.980827925789202 3 Q9BQ67,Q09028 2
|
| 124 |
+
Serine-threonine protein phosphatase, N-terminal [IPR031675] 0.5836487509462454 0.2392993717230179 0.8108734525504717 1.0 0.980827925789202 2 P62140 1
|
| 125 |
+
Brix domain [IPR007109] 0.4299242424242533 0.2392267056457077 0.8109297956575696 1.0 0.980827925789202 4 Q96G21,Q9H7B2,Q9NQ55 3
|
| 126 |
+
PABP, RNA recognition motif 2 [IPR045305] 0.5772142316426904 0.225973434355888 0.8212220822492642 1.0 0.980827925789202 2 Q13310 1
|
| 127 |
+
Pseudouridine synthase II, N-terminal [IPR002501] 0.5749432248296671 0.2213970210299046 0.8247833117569252 1.0 0.980827925789202 2 Q8WWH5 1
|
| 128 |
+
XPC-binding domain [IPR015360] 0.5730507191521507 0.2176340860467473 0.8277142241755022 1.0 0.980827925789202 2 P54725 1
|
| 129 |
+
RAD23A/RAD23B, UBA1 domain [IPR041811] 0.5730507191521507 0.2176340860467473 0.8277142241755022 1.0 0.980827925789202 2 P54725 1
|
| 130 |
+
Beta-Casp domain [IPR022712] 0.467625899280562 0.2075341448901166 0.8355927293228169 1.0 0.980827925789202 3 Q9UKF6,Q5TA45 2
|
| 131 |
+
Aminotransferase, class I/classII [IPR004839] 0.3986738567926406 0.198364662412934 0.8427597633609691 1.0 0.980827925789202 5 O15269 1
|
| 132 |
+
Pyrroline-5-carboxylate reductase, dimerisation domain [IPR029036] 0.5423921271763729 0.1631306649933326 0.870415556010476 1.0 0.980827925789202 2 P32322 1
|
| 133 |
+
Pyrroline-5-carboxylate reductase, catalytic, N-terminal [IPR028939] 0.5423921271763729 0.1631306649933326 0.870415556010476 1.0 0.980827925789202 2 P32322 1
|
| 134 |
+
Methyltransferase type 11 [IPR013216] 0.5355791067373129 0.1526644960490447 0.8786628605461735 1.0 0.980827925789202 2 Q6FI81 1
|
| 135 |
+
Small-subunit processome, Utp12 [IPR007148] 0.4255963650132428 0.1344755969597232 0.8930265066084544 1.0 0.980827925789202 3 Q15269,Q15061 2
|
| 136 |
+
Nucleoporin, Nup133/Nup155-like, C-terminal [IPR007187] 0.5189250567751614 0.129545650878903 0.8969259050713227 1.0 0.980827925789202 2 Q8WUM0 1
|
| 137 |
+
EF-hand domain [IPR002048] 0.3353590823656791 0.1258267332117309 0.899869079907436 1.0 0.980827925789202 44 P80303,Q14257,O43852,Q9Y680,Q02818 5
|
| 138 |
+
Proteasome activator PA28, C-terminal domain [IPR003186] 0.4184021204089265 0.1243687497997235 0.9010233152619408 1.0 0.980827925789202 3 P61289,Q9UL46 2
|
| 139 |
+
Proteasome activator PA28, N-terminal domain [IPR003185] 0.4184021204089265 0.1243687497997235 0.9010233152619408 1.0 0.980827925789202 3 P61289,Q9UL46 2
|
| 140 |
+
ABC transporter type 1, transmembrane domain [IPR011527] 0.4117905131299706 0.1156828356573919 0.9079039100715928 1.0 0.982643731745196 3 P08183 1
|
| 141 |
+
2Fe-2S ferredoxin-type iron-sulfur binding domain [IPR001041] 0.5045420136260311 0.1123108824854929 0.9105769134218508 1.0 0.984683734252254 2 P28331 1
|
| 142 |
+
Zn-dependent metallo-hydrolase, RNA specificity domain [IPR011108] 0.497350492051466 0.1046042677942002 0.9166898280779918 1.0 0.9888955176192435 2 Q5TA45 1
|
| 143 |
+
Ancestral coatomer element 1, Sec16/Sec31 [IPR024298] 0.4784254352762951 0.0870594714919429 0.9306242400860488 1.0 0.9888955176192435 2 O15027 1
|
| 144 |
+
Class II aldolase/adducin N-terminal [IPR001303] 0.4757759273277774 0.0849040700003037 0.9323376560814712 1.0 0.9888955176192435 2 Q9UEY8 1
|
| 145 |
+
Ran binding domain [IPR000156] 0.3503787878787998 0.0794288572128987 0.9366915164084846 1.0 0.9888955176192435 4 Q9UKX7,Q9H6Z4,P43487 3
|
| 146 |
+
GINS subunit, domain A [IPR021151] 0.4534443603330697 0.0694146671909446 0.9446595543500832 1.0 0.9888955176192435 2 Q9BRX5 1
|
| 147 |
+
Ariadne domain [IPR045840] 0.450416351249046 0.0676585275774773 0.946057463820825 1.0 0.9888955176192435 2 O95376 1
|
| 148 |
+
TRIAD supradomain [IPR044066] 0.450416351249046 0.0676585275774773 0.946057463820825 1.0 0.9888955176192435 2 O95376 1
|
| 149 |
+
IBR domain [IPR002867] 0.450416351249046 0.0676585275774773 0.946057463820825 1.0 0.9888955176192435 2 O95376 1
|
| 150 |
+
Exonuclease, RNase T/DNA polymerase III [IPR013520] 0.442846328538974 0.0635965835095783 0.949291452201506 1.0 0.9888955176192435 2 Q9GZR2 1
|
| 151 |
+
Coatomer subunit gamma, C-terminal [IPR032154] 0.4390613171839398 0.0617340849574712 0.9507745958548852 1.0 0.9888955176192435 2 Q9Y678 1
|
| 152 |
+
Coatomer, gamma subunit, appendage, Ig-like subdomain [IPR013040] 0.4390613171839398 0.0617340849574712 0.9507745958548852 1.0 0.9888955176192435 2 Q9Y678 1
|
| 153 |
+
Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type [IPR003617] 0.3498674744415014 0.0598073028089577 0.952309109190422 1.0 0.9888955176192435 3 Q14241,P23193 2
|
| 154 |
+
Transcription factor IIS, N-terminal [IPR017923] 0.3498674744415014 0.0598073028089577 0.952309109190422 1.0 0.9888955176192435 3 Q14241,P23193 2
|
| 155 |
+
Septin-type guanine nucleotide-binding (G) domain [IPR030379] 0.3430518742900456 0.056093834305687 0.9552670557180438 1.0 0.9888955176192435 3 Q16181,Q15019 2
|
| 156 |
+
SGS domain [IPR007699] 0.4118092354276992 0.0512439292341059 0.959131147339266 1.0 0.9888955176192435 2 Q9HB71 1
|
| 157 |
+
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain [IPR012001] 0.393262679788035 0.0465372113519926 0.9628820758319612 1.0 0.9888955176192435 2 A1L0T0 1
|
| 158 |
+
Thiamine pyrophosphate enzyme, C-terminal TPP-binding [IPR011766] 0.393262679788035 0.0465372113519926 0.9628820758319612 1.0 0.9888955176192435 2 A1L0T0 1
|
| 159 |
+
Thiamine pyrophosphate enzyme, central domain [IPR012000] 0.393262679788035 0.0465372113519926 0.9628820758319612 1.0 0.9888955176192435 2 A1L0T0 1
|
| 160 |
+
CRAL-TRIO lipid binding domain [IPR001251] 0.3875851627554804 0.0454100574078385 0.9637804646062528 1.0 0.9888955176192435 2 Q8NHP6 1
|
| 161 |
+
Ribosomal protein S5, C-terminal [IPR005324] 0.369417108251315 0.0426025975062169 0.9660183248613908 1.0 0.9888955176192435 2 P82675 1
|
| 162 |
+
Ribosomal protein S5, N-terminal [IPR013810] 0.369417108251315 0.0426025975062169 0.9660183248613908 1.0 0.9888955176192435 2 P82675 1
|
| 163 |
+
Transcription elongation factor S-II, central domain [IPR003618] 0.3444360333080926 0.0402613236083672 0.96788478805125 1.0 0.9888955176192435 2 P23193 1
|
| 164 |
+
Hexokinase, C-terminal [IPR022673] 0.3050719152157387 0.0386802528548032 0.9691453175646784 1.0 0.9888955176192435 2 P52789 1
|
| 165 |
+
Hexokinase, N-terminal [IPR022672] 0.3050719152157387 0.0386802528548032 0.9691453175646784 1.0 0.9888955176192435 2 P52789 1
|
| 166 |
+
DNA2/NAM7 helicase, helicase domain [IPR041677] 0.2494945508766823 0.0340735362328422 0.9728185112542732 1.0 0.9908177964845284 3 O60306 1
|
interpro_domain/selections.json
ADDED
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interpro_family/advanced/idx2term.json
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| 1 |
+
{"0": "Proteasome B-type subunit [IPR023333]"}
|
interpro_family/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
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|
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| 1 |
+
{"0": "Proteasome B-type subunit [IPR023333]", "1": "Proteasome, subunit alpha/beta [IPR001353]", "2": "Mitochondrial carrier protein [IPR002067]", "3": "Short-chain dehydrogenase/reductase SDR [IPR002347]", "4": "Small GTPase [IPR001806]"}
|
interpro_family/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_2.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_3.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_4.png
ADDED
|
Git LFS Details
|
interpro_family/consensus.joblib
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
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|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d11c0b1b57dcd56137bbd6714e8a81ce3a00b76ab2775e5ad7b4d6f938f5e79e
|
| 3 |
+
size 127243
|
interpro_family/df_merge.tsv
ADDED
|
@@ -0,0 +1,2 @@
|
|
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|
| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Proteasome B-type subunit [IPR023333] 6 7 2.1343903070752974 0.0328108443682415 3.699029126213592 6.970873786407767 1.6670727234653664 0.1509307531330224 1.4503762582219135 0.1681602725795027 0.9611878160538336 0.233503072382129 0.0002361262018994 1.0 0.0031504918831051 9.327097249989188e-07 1.9890121517705644e-08
|