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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +3 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/basic/plot_0.png +3 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +1 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +6 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/advanced/plot_0.png +3 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/basic/plot_1.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +2 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +22 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/advanced/plot_0.png +3 -0
- interpro_domain/advanced/plot_1.png +3 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/basic/plot_5.png +3 -0
- interpro_domain/basic/plot_6.png +3 -0
- interpro_domain/basic/plot_7.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +6 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +190 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/advanced/plot_0.png +3 -0
- interpro_family/advanced/plot_1.png +3 -0
- interpro_family/basic/idx2term.json +1 -0
interpro_active_site/advanced/idx2term.json
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{}
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interpro_active_site/basic/idx2term.json
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{}
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:05984ef2f09bd6901e6b08c0432d33fbc72cea4a01811ee3d8dd40ca8abec5dc
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size 75310
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 3040,
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"annotations_size": 55,
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"title": "Average number of proteins per term",
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"value": 2.6
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C293/C293_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Histidine acid phosphatase active site [IPR033379] 0.9048716260697712 1.5689387715455432 0.1166622065728513 0.9989111334363204 0.2212559090174766 2 Q9NPH0 1
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Serine carboxypeptidase, serine active site [IPR018202] 0.8337174843595558 1.1959529674396876 0.2317149134628087 0.9999994944871892 0.3861915224380145 3 Q9HB40,P10619 2
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interpro_active_site/selections.json
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{"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Coenzyme A transferase active site [IPR004164]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "BUB1", "CAMK2D", "CAMK2G", "CAPN1", "CAPN2", "CDC34", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CHEK1", "CHEK2", "CHUK", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCS1", "IKBKB", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAPK1", "MAPK3", "MAPKAPK2", "MDH1", "MDH2", "MTMR2", "NEK9", "NME1", "NME2", "OXCT1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN2", "PLK1", "PREP", "PRKAA2", "PRKCD", "PRPF4B", "PTK7", "PTPMT1", "PTPN1", "PTPN11", "PTPN23", "RNASET2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SRPK2", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2G2", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UBE2T", "ULK3", "UMPS", "UNG", "VRK1", "VRK2", "WNK1", "YES1"], "leading_proteins": ["ACP6", "CTSA", "SCPEP1"]}
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interpro_binding_site/advanced/idx2term.json
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{}
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interpro_binding_site/basic/idx2term.json
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{"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
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interpro_binding_site/basic/plot_0.png
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:ccde957cacfb8108894bd3b6f8741570625c19aed66b4982d24dea4bdfc6a195
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size 69787
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 3040,
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"annotations_size": 31,
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"title": "Average number of proteins per term",
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"value": 4.548387096774194
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C293/C293_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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EF-Hand 1, calcium-binding site [IPR018247] 0.392248662986251 1.5426689738837285 0.1229111134420357 0.9828465352911512 0.2772725117467243 40 P80303,Q14257,P0DP25,Q9Y680,Q6NUK1,O95302,Q02818,Q9NWM8,P41208 9
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Peptidase M16, zinc-binding site [IPR001431] 0.4885120053524056 0.6016144977973463 0.5474307761748078 0.9999999999788048 0.6087463876737773 5 Q10713 1
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Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917] 0.6675444371296919 0.5980067233751343 0.5498354469311537 0.9999999999820316 0.6087463876737773 2 O15270 1
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Beta tubulin, autoregulation binding site [IPR013838] 0.4629324546952163 0.492266605027309 0.6225308847600735 0.9999999999999236 0.6553809025492945 5 P07437,P04350,P68371,Q9BUF5 4
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Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798] 0.5757077024358063 0.3023579050934096 0.7623792407149717 1.0 0.7623792407149717 2 P34896 1
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Coenzyme A transferase binding site [IPR004163]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "AURKA", "BPNT1", "BUB1", "CALM3", "CALU", "CAMK2D", "CAMK2G", "CAPN1", "CAPN2", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CETN2", "CHEK1", "CHUK", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DBT", "DCTD", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "FKBP10", "FKBP14", "FKBP7", "FKBP9", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "IQGAP2", "ITSN2", "LETM1", "LPCAT2", "MACF1", "MAP2K1", "MAPK1", "MAPK3", "MAPKAPK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1C", "MYO1D", "NFS1", "NRDC", "NUCB1", "NUCB2", "OXCT1", "OXSR1", "PA2G4", "PAK2", "PC", "PCCA", "PDCD6", "PDHX", "PEF1", "PGD", "PKMYT1", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1G", "PRKAA2", "PRKCD", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "SRPK2", "STK26", "STK4", "TKT", "TUBB", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "ULK3", "UQCRC2", "VRK1", "YES1"], "leading_proteins": ["CALM3", "CETN2", "FKBP14", "FKBP7", "FKBP9", "NUCB1", "NUCB2", "PMPCA", "RCN2", "SHMT1", "SLC25A24", "SPTLC2", "TUBB", "TUBB4A", "TUBB4B", "TUBB6"]}
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interpro_conserved_site/advanced/idx2term.json
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{"0": "Syntaxin/epimorphin, conserved site [IPR006012]"}
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interpro_conserved_site/advanced/plot_0.png
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interpro_conserved_site/basic/idx2term.json
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{"0": "Syntaxin/epimorphin, conserved site [IPR006012]", "1": "14-3-3 protein, conserved site [IPR023409]"}
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interpro_conserved_site/basic/plot_0.png
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interpro_conserved_site/basic/plot_1.png
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:4e3b6333fceebab9d8eb3854a2e78a12970c90a44e69d7b169d80c6a2fc3c125
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size 97795
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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Syntaxin/epimorphin, conserved site [IPR006012] 6 8 2.4084260946829263 0.0160214697670266 2.592233009708738 5.847087378640777 0.9961908981999794 0.2839139128702306 1.4759357288864456 1.4239341993278547 1.138258151200134 0.2914162845337057 0.0011015965796577 0.0607401038440192 0.1180585699575878 0.0382400085743442 1.6468344784532795e-05
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 3040,
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"annotations_size": 271,
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"title": "Average number of proteins per term",
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"value": 2.5830258302583027
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C293/C293_val_log2fc"}
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interpro_conserved_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Syntaxin/epimorphin, conserved site [IPR006012] 0.8046786731159765 2.4084260946829263 0.0160214697670266 0.9874367008466088 0.1027728186312747 8 P56962,O15400,O43752,Q9P2W9,Q13277,Q13190 6
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| 3 |
+
Haem oxygenase conserved site [IPR018207] 0.9888084265964436 1.9236635497818748 0.0543967697252369 0.9999997387088664 0.1842690574442403 2 P09601 1
|
| 4 |
+
Thioredoxin, conserved site [IPR017937] 0.5394092088648637 1.5667348560571512 0.1171766798579851 0.999999999999998 0.3342618972790945 12 P07237,Q96JJ7,Q9H1E5 3
|
| 5 |
+
Tetraspanin, conserved site [IPR018503] 0.8749177090190711 1.4415949256462506 0.1494166807858103 1.0 0.3864806070561967 2 O43657 1
|
| 6 |
+
Polyprenyl synthetase, conserved site [IPR033749] 0.8676761026991445 1.410811594357241 0.1583001748458961 1.0 0.3864806070561967 2 Q5T2R2 1
|
| 7 |
+
Glycoside hydrolase, family 29, conserved site [IPR018526] 0.8077682685977624 1.1572843432935744 0.2471562080862368 1.0 0.5014740542008198 2 Q9BTY2 1
|
| 8 |
+
Intermediate filament protein, conserved site [IPR018039] 0.5447771795255602 1.106847540018514 0.2683598502282822 1.0 0.5232051756249243 8 Q16352,P07196,P08670 3
|
| 9 |
+
3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.7722185648452711 1.0090634346706262 0.3129442127738726 1.0 0.5790380659536397 2 Q16836 1
|
| 10 |
+
Proteasome beta-type subunit, conserved site [IPR016050] 0.5134475574253535 0.9418221015027792 0.3462837276836008 1.0 0.6015569884759989 8 P28070,P49721 2
|
| 11 |
+
Sugar transporter, conserved site [IPR005829] 0.7093482554311825 0.7558509768751153 0.4497385490312877 1.0 0.6457806590376296 2 Q7L0J3 1
|
| 12 |
+
C-type lectin, conserved site [IPR018378] 0.708689927583938 0.7532865433381917 0.4512777433862711 1.0 0.6457806590376296 2 Q9UBG0 1
|
| 13 |
+
Guanylate kinase, conserved site [IPR020590] 0.5202635914332723 0.742924723155322 0.4575272565875456 1.0 0.6457806590376296 5 Q00013,Q5T2T1,Q14168,O14936 4
|
| 14 |
+
EGF-like, conserved site [IPR013032] 0.6445029624753141 0.5162199165978113 0.605700821436691 1.0 0.7495201945632112 2 O94813 1
|
| 15 |
+
EGF-like calcium-binding, conserved site [IPR018097] 0.6445029624753141 0.5162199165978113 0.605700821436691 1.0 0.7495201945632112 2 O94813 1
|
| 16 |
+
Tubulin, conserved site [IPR017975] 0.4629324546952166 0.4922666050273103 0.6225308847600726 1.0 0.7537863163071451 5 P07437,P04350,P68371,Q9BUF5 4
|
| 17 |
+
Actin, conserved site [IPR004001] 0.5868992758393696 0.3335422483937915 0.7387250037752482 1.0 0.8341436500962177 2 P61163 1
|
| 18 |
+
14-3-3 protein, conserved site [IPR023409] 0.3991430454845158 0.3245130311572731 0.7455496581804859 1.0 0.8383566695722476 6 P27348,P31946,P62258,P63104,Q04917 5
|
| 19 |
+
S100/Calbindin-D9k, conserved site [IPR001751] 0.5543120473996068 0.2471960724604582 0.8047564847288204 1.0 0.8846082139390784 2 P31949 1
|
| 20 |
+
RNA polymerase, beta subunit, conserved site [IPR007121] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9569950986076866 2 P30876 1
|
| 21 |
+
Ribosomal protein S5, N-terminal, conserved site [IPR018192] 0.4282422646477968 0.0497229101535463 0.9603431993759924 1.0 0.9820868189845054 2 P82675 1
|
| 22 |
+
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752] 0.2748518762343674 0.00969018452204 0.9922684723767126 1.0 1.0 2 O43175 1
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 14-18kDa subunit, conserved site [IPR020708]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Di-trans-poly-cis-decaprenylcistransferase-like, conserved site [IPR018520]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycerate/sugar phosphate transporter, conserved site [IPR021159]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "PTR2 family proton/oligopeptide symporter, conserved site [IPR018456]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase, RluC/RluD, conserved site [IPR006224]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Pyridoxamine 5'-phosphate oxidase, conserved site [IPR019740]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S14, conserved site [IPR018271]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB10", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1A2", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA4", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "AP3S1", "APEX1", "APP", "ATAD1", "ATAD2", "ATG16L1", "ATP5C1", "ATP5O", "BAG6", "BAZ1A", "BAZ1B", "BAZ2A", "BCS1L", "BDH2", "BLM", "BOP1", "BPNT1", "BRD2", "BRPF1", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDH2", "CDKAL1", "CETN2", "CHAF1B", "CHD1", "CHD1L", "CHD4", "CHD5", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "COQ5", "CORO1B", "CORO1C", "CPOX", "CRYZ", "CSTB", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHDDS", "DHFR", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX30", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIS3", "DNAJA1", "DNAJA2", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DRG1", "DRG2", "DSC2", "DSG2", "DST", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHS1", "ECI1", "ECI2", "EED", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A3", "EIF4E", "ENO1", "EPB41", "EPB41L2", "EPB41L3", "EPB41L5", "EPDR1", "EPHA7", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPAD1", "IMPDH2", "INA", "IQGAP1", "IQGAP2", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF13B", "KIF1A", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK3", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "ME2", "MGST2", "MID1", "MIF", "MPHOSPH8", "MPI", "MPP1", "MPP2", "MPP6", "MPP7", "MPST", "MRC2", "MRPL24", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NF1", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NOTCH2", "NSD2", "NSF", "NTHL1", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL3", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCNA", "PDIA3", "PDIA4", "PDIA5", "PDIA6", "PDSS1", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF2", "PHF3", "PHF8", "PHGDH", "PHIP", "PHRF1", "PI4KA", "PI4KB", "PIK3C2A", "PIK3C3", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PNP", "PNPLA6", "PNPO", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "POLR2F", "PPIB", "PPIC", "PPID", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RCL1", "RDH13", "RDX", "RIDA", "RNF14", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS29", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RPUSD2", "RRP8", "RSF1", "RTCA", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC15A4", "SLC1A5", "SLC27A4", "SLC2A1", "SLC37A4", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX10", "STX12", "STX17", "STX18", "STX3", "STX5", "STX6", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TAP1", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TSPAN10", "TSPAN6", "TUBB", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBA5", "UHRF1", "USP10", "USP11", "USP14", "USP19", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["ACTR1A", "CASK", "FUCA2", "HADH", "HMOX1", "INA", "MPP1", "MPP2", "MPP7", "MRC2", "MRPS5", "NEFL", "P4HB", "PDSS1", "PHGDH", "POLR2B", "PSMB2", "PSMB4", "S100A11", "SLIT2", "STX17", "STX18", "STX3", "STX5", "STX6", "STX7", "SV2A", "TMX3", "TMX4", "TSPAN6", "TUBB", "TUBB4A", "TUBB4B", "TUBB6", "VIM", "YWHAB", "YWHAE", "YWHAH", "YWHAQ", "YWHAZ"]}
|
interpro_domain/advanced/idx2term.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"0": "Target SNARE coiled-coil homology domain [IPR000727]", "1": "Importin-beta, N-terminal domain [IPR001494]"}
|
interpro_domain/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/advanced/plot_1.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/idx2term.json
ADDED
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| 1 |
+
{"0": "Target SNARE coiled-coil homology domain [IPR000727]", "1": "Importin-beta, N-terminal domain [IPR001494]", "2": "Phospholipid/glycerol acyltransferase [IPR002123]", "3": "EF-hand domain [IPR002048]", "4": "Major facilitator superfamily domain [IPR020846]", "5": "Band 7 domain [IPR001107]", "6": "14-3-3 domain [IPR023410]", "7": "Small GTP-binding protein domain [IPR005225]"}
|
interpro_domain/basic/plot_0.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
|
Git LFS Details
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interpro_domain/basic/plot_2.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_3.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_4.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_5.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_6.png
ADDED
|
Git LFS Details
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interpro_domain/basic/plot_7.png
ADDED
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Git LFS Details
|
interpro_domain/consensus.joblib
ADDED
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version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a0bb4f6410019bcf9d3cbf464b831647c3ae47730c7b07acdd033d179ffe4656
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| 3 |
+
size 304179
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interpro_domain/df_merge.tsv
ADDED
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| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Target SNARE coiled-coil homology domain [IPR000727] 8 12 2.5048035358053213 0.0122519427380496 3.5024271844660193 8.266990291262136 0.5942034778060385 0.4012381903331891 1.9023475359698396 2.183694577914796 1.0582363712887182 0.3038263160802639 0.0136183078461816 1.0 1.0 0.4587195489148998 0.0001380877092489
|
| 3 |
+
Importin-beta, N-terminal domain [IPR001494] 8 13 2.422400514640592 0.0154183468266064 6.385922330097087 13.28883495145631 0.1695856896111973 0.5104356360219653 3.297409379395681 0.8134617396566306 1.1027535719761996 0.3475482514742156 0.4813935862458969 1.0 1.0 0.3411306657380243 0.0468003866103798
|
| 4 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 3 5 2.138097496124056 0.0325088311202219 2.121359223300971 5.466019417475728 1.4317001483019938 0.1783942022754649 1.021530403905949 0.5881604361499402 0.986353205880356 0.2226891741813114 0.0001254368379847 1.0 0.0743799864466655 0.0148625463558957 0.0003311660608568
|
| 5 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 3 5 2.138097496124056 0.0325088311202219 2.121359223300971 5.466019417475728 1.4317001483019938 0.1783942022754649 1.021530403905949 0.5881604361499402 0.986353205880356 0.2226891741813114 0.0001254368379847 1.0 0.0743799864466655 0.0148625463558957 0.0003311660608568
|
| 6 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 2 6 1.9622407626612277 0.049734460230614 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.0091783194539023 0.0561990347849709 0.1094892401774078 0.0328731354880699 0.0181181417645757
|
interpro_domain/metrics.json
ADDED
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+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 3040,
|
| 4 |
+
"annotations_size": 2522,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.120539254559873
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
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| 1 |
+
{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C293/C293_val_log2fc"}
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interpro_domain/result.tsv
ADDED
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@@ -0,0 +1,190 @@
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| 1 |
+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Target SNARE coiled-coil homology domain [IPR000727] 0.6972206788968138 2.5048035358053213 0.0122519427380496 0.9999999999999686 0.1276745511673693 12 Q86Y82,P56962,O15400,O43752,Q13277,Q9UEU0,O15155,Q13190 8
|
| 3 |
+
Importin-beta, N-terminal domain [IPR001494] 0.6557478622551338 2.422400514640592 0.0154183468266064 1.0 0.1309527677047245 13 Q8TEX9,Q92973,O43592,O15397,O95373,P55060,Q96P70,Q9HAV4 8
|
| 4 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.8246657077284575 2.138097496124056 0.0325088311202219 1.0 0.1646392377153801 5 Q9NZ08,P09960,Q9UIQ6 3
|
| 5 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 0.8246657077284575 2.138097496124056 0.0325088311202219 1.0 0.1646392377153801 5 Q9NZ08,P09960,Q9UIQ6 3
|
| 6 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.7376110304708573 1.9622407626612273 0.049734460230614 1.0 0.2076660740092856 6 O43169,O15173 2
|
| 7 |
+
Immunoglobulin-like domain [IPR007110] 0.6747728879662407 1.931689330184856 0.0533978625090136 1.0 0.2157788971293487 9 P10321,P35613,P04439,Q08722 4
|
| 8 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.7288478249605723 1.9206876619717992 0.0547710959997362 1.0 0.2170187342356873 6 P16615,Q9HD20,P98194,P05023 4
|
| 9 |
+
GOLD domain [IPR009038] 0.7251177669453573 1.9029459238513449 0.0570476017304217 1.0 0.2230605450606569 6 P49755,Q9Y3B3,Q15363 3
|
| 10 |
+
START domain [IPR002913] 0.9631336405529912 1.815697091820387 0.0694168504246062 1.0 0.2493864626365482 2 Q14849 1
|
| 11 |
+
Phospholipid/glycerol acyltransferase [IPR002123] 0.683161403384659 1.7899617008752982 0.0734600685841435 1.0 0.2548367166013893 7 Q86UL3,Q9NUQ2,Q7L5N7,Q8NF37,Q92604 5
|
| 12 |
+
EF-hand domain [IPR002048] 0.4094164475637834 1.7872886283173344 0.0738908510197691 1.0 0.2555406215427682 46 O43852,P80303,Q14257,Q8IYU8,O75071,P0DP25,Q9BRK5,Q9Y680,Q6NUK1,O95302,Q02818,Q9NWM8,Q8NF37,P41208 14
|
| 13 |
+
Major facilitator superfamily domain [IPR020846] 0.6719419716452145 1.734188919214408 0.0828845683948655 1.0 0.2772345908379987 7 Q14728,Q7L0J3,P11166,O43826,Q9H2V7,Q6NT16 6
|
| 14 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.6054404648148898 1.722004529733052 0.0850686979392743 1.0 0.2815528296625325 10 Q9Y680,Q9NWM8,P62942,O95302 4
|
| 15 |
+
Band 7 domain [IPR001107] 0.6634007185640727 1.72110799654933 0.0852312284978153 1.0 0.2817210462273793 8 Q99623,O75477,Q9UJZ1,P27105,O94905 5
|
| 16 |
+
MENTAL domain [IPR019498] 0.9371296905859032 1.7058049179211745 0.0880444071795318 1.0 0.2865135418151992 2 Q14849 1
|
| 17 |
+
GMP phosphodiesterase, delta subunit [IPR008015] 0.9364713627386372 1.703016916117195 0.0885649027595625 1.0 0.2868167825391938 2 A6NIH7 1
|
| 18 |
+
Flavoprotein pyridine nucleotide cytochrome reductase [IPR001709] 0.9321922317314024 1.684888705552279 0.0920100460675372 1.0 0.2926221137229873 2 P16435 1
|
| 19 |
+
Oxidoreductase FAD/NAD(P)-binding [IPR001433] 0.9321922317314024 1.684888705552279 0.0920100460675372 1.0 0.2926221137229873 2 P16435 1
|
| 20 |
+
FAD-binding domain, ferredoxin reductase-type [IPR017927] 0.9321922317314024 1.684888705552279 0.0920100460675372 1.0 0.2926221137229873 2 P16435 1
|
| 21 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.8476909646031103 1.680980400442545 0.0927667216024585 1.0 0.2939166732178399 4 Q15629,Q96G23 2
|
| 22 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.6527247571825523 1.6379643213623651 0.1014291367379773 1.0 0.2984880780083768 7 O60313,Q8IWA4,O00429 3
|
| 23 |
+
Dynamin, N-terminal [IPR045063] 0.6527247571825523 1.6379643213623651 0.1014291367379773 1.0 0.2984880780083768 7 O60313,Q8IWA4,O00429 3
|
| 24 |
+
Endoplasmic reticulum vesicle transporter, N-terminal [IPR039542] 0.91310072416062 1.6038950996736852 0.10873717716534 1.0 0.3042237523049474 2 Q9Y282 1
|
| 25 |
+
Endoplasmic reticulum vesicle transporter, C-terminal [IPR012936] 0.91310072416062 1.6038950996736852 0.10873717716534 1.0 0.3042237523049474 2 Q9Y282 1
|
| 26 |
+
Peptidase M48 [IPR001915] 0.9101382488479148 1.5913133444710004 0.1115390751125691 1.0 0.307441509274537 2 O75844 1
|
| 27 |
+
Peptidase M16, C-terminal [IPR007863] 0.635929756946517 1.5531858631748496 0.1203787376673555 1.0 0.3216050597426595 7 Q5JRX3 1
|
| 28 |
+
Peptidase M16, N-terminal [IPR011765] 0.635929756946517 1.5531858631748496 0.1203787376673555 1.0 0.3216050597426595 7 Q5JRX3 1
|
| 29 |
+
Reticulon [IPR003388] 0.9213039183404628 1.5392566968634347 0.1237416410570291 1.0 0.3271241286643893 3 Q9NQC3,O95197 2
|
| 30 |
+
Immunoglobulin subtype 2 [IPR003598] 0.6727798944604971 1.45170454519973 0.1465837749722411 1.0 0.358916777165041 5 P35613 1
|
| 31 |
+
Immunoglobulin subtype [IPR003599] 0.6727798944604971 1.45170454519973 0.1465837749722411 1.0 0.358916777165041 5 P35613 1
|
| 32 |
+
Protein kinase, C-terminal [IPR017892] 0.6692802322549389 1.4354493907020287 0.1511590801758928 1.0 0.3665607694265402 5 P51812,Q05655,Q15418 3
|
| 33 |
+
Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.7875494071146304 1.431061098876443 0.1524127050330188 1.0 0.3673695581195915 4 P05023,P16615,P98194 3
|
| 34 |
+
Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.7875494071146304 1.431061098876443 0.1524127050330188 1.0 0.3673695581195915 4 P05023,P16615,P98194 3
|
| 35 |
+
Tim10-like [IPR004217] 0.7823465317840146 1.409312144671934 0.158742889280623 1.0 0.3750265340499959 4 P62072,Q9Y5J9 2
|
| 36 |
+
MD-2-related lipid-recognition domain [IPR003172] 0.8647136273864255 1.3982217544957078 0.1620464859685202 1.0 0.3773603302055476 2 P17900 1
|
| 37 |
+
YTH domain [IPR007275] 0.6568446639172189 1.377582162685787 0.1683323312711389 1.0 0.384890425626303 5 Q7Z739,Q9Y5A9 2
|
| 38 |
+
ERAP1-like C-terminal domain [IPR024571] 0.8765228844254134 1.3636927728617638 0.1726642796053845 1.0 0.3902287982901509 3 Q9NZ08,Q9UIQ6 2
|
| 39 |
+
Acyl-CoA oxidase, C-terminal [IPR002655] 0.8475971033574727 1.3255444619543282 0.1849906327747317 1.0 0.4049881734877373 2 O15254 1
|
| 40 |
+
FAD dependent oxidoreductase [IPR006076] 0.7602108036890642 1.3166504216056103 0.1879558292858831 1.0 0.4081785714290186 4 Q8NCN5,Q96CU9,P43304 3
|
| 41 |
+
Zinc finger, CHHC-type [IPR012996] 0.8594007243990773 1.2965282922203316 0.1947935392680762 1.0 0.4121386795587988 3 P55795,P52597 2
|
| 42 |
+
RBM3/CIRBP, RNA recognition motif [IPR034278] 0.8393680052666231 1.2906598807443812 0.1968216420444946 1.0 0.4157321450889576 2 Q14011 1
|
| 43 |
+
Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.8373930217248196 1.2822947748660996 0.1997392602235645 1.0 0.4183907095380647 2 O60506 1
|
| 44 |
+
Ribosomal S6 kinase, N-terminal catalytic domain [IPR041906] 0.8357472021066377 1.275326216878231 0.2021938020269671 1.0 0.4221297754238502 2 P51812 1
|
| 45 |
+
LEM domain [IPR003887] 0.5916100941755201 1.2491996850246008 0.2115920471821648 1.0 0.4345563053692343 6 Q86XL3,P42167 2
|
| 46 |
+
CARG-binding factor, N-terminal [IPR012956] 0.8206056616194872 1.211333138357468 0.2257677531463162 1.0 0.4504638239201025 2 Q99729 1
|
| 47 |
+
Syntaxin, N-terminal domain [IPR006011] 0.8320711228185693 1.1895180192225572 0.234235884581734 1.0 0.4568777269258572 3 Q13277,O15400 2
|
| 48 |
+
ATPase family AAA domain-containing protein 3, N-terminal [IPR021911] 0.8120473996050039 1.1752761628146475 0.2398842479519007 1.0 0.4621757626697431 2 Q5T9A4 1
|
| 49 |
+
Dynamin, GTPase domain [IPR001401] 0.8267694017136431 1.168809173180804 0.2424805236913727 1.0 0.4636359975357407 3 O60313 1
|
| 50 |
+
Intermediate filament head, DNA-binding domain [IPR006821] 0.7246376811594191 1.1676142170505406 0.2429624128563206 1.0 0.4642054585027579 4 Q16352,P07196,P08670 3
|
| 51 |
+
Choline/carnitine acyltransferase domain [IPR039551] 0.8097432521395419 1.1655850178297382 0.2437822681858401 1.0 0.4650884297092342 2 P23786 1
|
| 52 |
+
Alpha-L-fucosidase, C-terminal [IPR031919] 0.8077682685977624 1.1572843432935744 0.2471562080862368 1.0 0.4679065220169759 2 Q9BTY2 1
|
| 53 |
+
N-acetylgalactosaminyltransferase [IPR045885] 0.8028308097432348 1.1365583189788224 0.2557229727866255 1.0 0.4752640658569414 2 Q10472 1
|
| 54 |
+
TGS [IPR004095] 0.5659462380894109 1.1206781020253926 0.2624249065706978 1.0 0.4827393248514223 6 Q9NTK5 1
|
| 55 |
+
Intermediate filament, rod domain [IPR039008] 0.5447771795255602 1.106847540018514 0.2683598502282822 1.0 0.4890399374154204 8 Q16352,P07196,P08670 3
|
| 56 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.7863726135615546 1.067773275032234 0.2856227960149549 1.0 0.5008892273532343 2 Q92945 1
|
| 57 |
+
Glycosyltransferase 2-like [IPR001173] 0.7958511689166861 1.048583732668242 0.2943697460616148 1.0 0.5088831660328128 3 Q10472,Q10471 2
|
| 58 |
+
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.7722185648452711 1.0090634346706262 0.3129442127738726 1.0 0.5251133097908894 2 Q16836 1
|
| 59 |
+
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.7722185648452711 1.0090634346706262 0.3129442127738726 1.0 0.5251133097908894 2 Q16836 1
|
| 60 |
+
Phosphatidylinositol 3-/4-kinase, catalytic domain [IPR000403] 0.5262956557902334 0.988882808141752 0.3227204828175041 1.0 0.5337056115840954 7 Q8NEB9,Q9BTU6 2
|
| 61 |
+
Sam68, tyrosine-rich domain [IPR032335] 0.7639894667544336 0.9751562967795592 0.3294827368120838 1.0 0.5390666935806543 2 O75525 1
|
| 62 |
+
KHDRBS, Qua1 domain [IPR032571] 0.7639894667544336 0.9751562967795592 0.3294827368120838 1.0 0.5390666935806543 2 O75525 1
|
| 63 |
+
Prolyl 4-hydroxylase alpha-subunit, N-terminal [IPR013547] 0.7613561553653727 0.9643451808247772 0.3348728962745131 1.0 0.5434681109422922 2 P13674 1
|
| 64 |
+
Post-SET domain [IPR003616] 0.7570770243581314 0.946820248068699 0.34373038220682 1.0 0.5521657448089982 2 O96028 1
|
| 65 |
+
FAD-binding domain, PCMH-type [IPR016166] 0.7551020408162946 0.9387504906198344 0.3478588636305602 1.0 0.5531592866538241 2 Q15392 1
|
| 66 |
+
FAD linked oxidase, N-terminal [IPR006094] 0.7551020408162946 0.9387504906198344 0.3478588636305602 1.0 0.5531592866538241 2 Q15392 1
|
| 67 |
+
Glycoside hydrolase family 2, catalytic domain [IPR006103] 0.7534562211981355 0.932034990706798 0.3513184426021958 1.0 0.5551146485434272 2 P08236 1
|
| 68 |
+
Rhodanese-like domain [IPR001763] 0.7643785273162309 0.9276389234799426 0.3535949000509419 1.0 0.5565842655270653 3 Q8NCN5 1
|
| 69 |
+
Acyltransferase, C-terminal domain [IPR032098] 0.747860434496349 0.909267860819746 0.3632087510947897 1.0 0.5638258130107159 2 Q9NUQ2 1
|
| 70 |
+
Lysophosphatidylcholine acyltransferase LPCAT1-like [IPR045252] 0.7566677642410211 0.8983167188599119 0.369016721720242 1.0 0.5674757147429575 3 Q8NF37,Q7L5N7 2
|
| 71 |
+
Fzo/mitofusin HR2 domain [IPR006884] 0.7369980250164592 0.8653830946730866 0.3868285565971101 1.0 0.5866395789163631 2 Q8IWA4 1
|
| 72 |
+
Acyl transferase [IPR014043] 0.7314022383146664 0.8429492735141532 0.3992568144029624 1.0 0.5965199561162745 2 Q8IVS2 1
|
| 73 |
+
Exportin-2, central domain [IPR013713] 0.7411919657556681 0.8399272057211852 0.400949202619806 1.0 0.5966835312734471 3 O95373,O15397 2
|
| 74 |
+
Peptidase M14, carboxypeptidase A [IPR000834] 0.7300855826201459 0.8376889984927226 0.4022053938004997 1.0 0.5966835312734471 2 P16870 1
|
| 75 |
+
AGC-kinase, C-terminal [IPR000961] 0.4937360578534181 0.820825277880337 0.4117457979751333 1.0 0.6013125789757813 7 P51812,Q05655 2
|
| 76 |
+
CBS domain [IPR000644] 0.5316424429430557 0.7946545499202847 0.4268144773667397 1.0 0.6119534462301977 5 Q8NE01,P51790,P51798 3
|
| 77 |
+
C-type lectin-like [IPR001304] 0.708689927583938 0.7532865433381917 0.4512777433862711 1.0 0.6329935866630566 2 Q9UBG0 1
|
| 78 |
+
CD209-like, C-type lectin-like domain [IPR033989] 0.708689927583938 0.7532865433381917 0.4512777433862711 1.0 0.6329935866630566 2 Q9UBG0 1
|
| 79 |
+
ALIX V-shaped domain [IPR025304] 0.7057274522712322 0.741774251739728 0.4582241234001183 1.0 0.6381232684787953 2 Q8WUM4 1
|
| 80 |
+
NOPS [IPR012975] 0.714208977060188 0.7399081629192553 0.4593557209953567 1.0 0.6386411953419457 3 P23246 1
|
| 81 |
+
Survival motor neuron [IPR010304] 0.7050691244239644 0.7392221947665739 0.4597720856764904 1.0 0.638867878829812 2 Q16637 1
|
| 82 |
+
Peptidase M28 [IPR007484] 0.7138623641751605 0.7386405164874003 0.4601253146075899 1.0 0.6390066318504084 3 Q7Z2K6,Q969V3 2
|
| 83 |
+
Glutathione S-transferase, N-terminal [IPR004045] 0.4767592010945922 0.734075728715576 0.4629025851613702 1.0 0.6403951287860535 7 P78417 1
|
| 84 |
+
Fibronectin type II domain [IPR000562] 0.7051483936889498 0.706932457790595 0.4796084522219637 1.0 0.6552397164159223 3 Q9UBV2 1
|
| 85 |
+
Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal [IPR018955] 0.6942067149440434 0.697455452084912 0.4855178089905698 1.0 0.6597391779494703 2 Q15118 1
|
| 86 |
+
Histidine kinase domain [IPR005467] 0.6942067149440434 0.697455452084912 0.4855178089905698 1.0 0.6597391779494703 2 Q15118 1
|
| 87 |
+
OCRE domain [IPR041591] 0.7011976335553154 0.692662970617506 0.4885210823930692 1.0 0.6623925644060863 3 P78332 1
|
| 88 |
+
Fatty acid desaturase domain [IPR005804] 0.6909150757077022 0.684932140160956 0.4933867434774266 1.0 0.6679127037305796 2 O95864 1
|
| 89 |
+
Armadillo repeat-containing domain [IPR006911] 0.6988216919193596 0.6841149639884729 0.4939025733933828 1.0 0.6682523015547808 3 Q9UH62 1
|
| 90 |
+
Proteasome activator PA28, N-terminal domain [IPR003185] 0.6875085274454442 0.6437775093683131 0.5197197199698267 1.0 0.6858434719602124 3 P61289 1
|
| 91 |
+
Proteasome activator PA28, C-terminal domain [IPR003186] 0.6875085274454442 0.6437775093683131 0.5197197199698267 1.0 0.6858434719602124 3 P61289 1
|
| 92 |
+
Tim44-like domain [IPR007379] 0.672481895984186 0.6160624403263176 0.537853310132802 1.0 0.6981297211296585 2 O43615 1
|
| 93 |
+
Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.5794574542304747 0.5791633086659539 0.5624789857327446 1.0 0.7118225754294308 4 P13674 1
|
| 94 |
+
Zinc finger C2H2 AKAP95-type [IPR034736] 0.6657886071781378 0.5682086876921895 0.5698932730295472 1.0 0.7142651031691902 3 O43823,Q5BKZ1 2
|
| 95 |
+
Ubiquitin carboxyl-terminal hydrolase, C-terminal [IPR029346] 0.6533903884134313 0.5472601291703351 0.5842000316068898 1.0 0.7232952772275779 2 P51784 1
|
| 96 |
+
DNA2/NAM7 helicase-like, C-terminal [IPR041679] 0.5654042866671739 0.5265678888751387 0.5984936959831857 1.0 0.7348593482325192 4 P51530 1
|
| 97 |
+
EGF-like calcium-binding domain [IPR001881] 0.6445029624753141 0.5162199165978113 0.605700821436691 1.0 0.7397469596432614 2 O94813 1
|
| 98 |
+
EXPERA domain [IPR033118] 0.6431863067807669 0.511678680442838 0.6088759093784206 1.0 0.7425459591162364 2 Q15125 1
|
| 99 |
+
Peptidase M3A/M3B catalytic domain [IPR001567] 0.648007902535388 0.5084563364862499 0.6111333527631373 1.0 0.7432909045811918 3 P52888,Q99797 2
|
| 100 |
+
CTP synthase, N-terminal [IPR017456] 0.6421988150098763 0.5082827157566613 0.6112550896516225 1.0 0.7432909045811918 2 P17812 1
|
| 101 |
+
CTP synthase GATase domain [IPR033828] 0.6421988150098763 0.5082827157566613 0.6112550896516225 1.0 0.7432909045811918 2 P17812 1
|
| 102 |
+
Tubulin/FtsZ, GTPase domain [IPR003008] 0.4629324546952166 0.4922666050273103 0.6225308847600726 1.0 0.7488644097634792 5 P07437,P04350,P68371,Q9BUF5 4
|
| 103 |
+
Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.4629324546952166 0.4922666050273103 0.6225308847600726 1.0 0.7488644097634792 5 P07437,P04350,P68371,Q9BUF5 4
|
| 104 |
+
Ricin B, lectin domain [IPR000772] 0.555596468216081 0.4906553050339914 0.6236702632535678 1.0 0.7495586756818574 4 Q10471,Q10472 2
|
| 105 |
+
L27 domain [IPR004172] 0.5509296594697239 0.4738168749135019 0.6356304999480664 1.0 0.7550919080871519 4 Q14168,O14936 2
|
| 106 |
+
L27 domain, C-terminal [IPR014775] 0.5509296594697239 0.4738168749135019 0.6356304999480664 1.0 0.7550919080871519 4 Q14168,O14936 2
|
| 107 |
+
Extended PHD (ePHD) domain [IPR034732] 0.6351401169919408 0.4665677542799357 0.6408091618618088 1.0 0.7573199185639559 3 P55201 1
|
| 108 |
+
Glutathione S-transferase, C-terminal [IPR004046] 0.4039860071847124 0.4571447977375019 0.6475669728843134 1.0 0.7613817741791321 9 P78417 1
|
| 109 |
+
v-SNARE, coiled-coil homology domain [IPR042855] 0.6289101086598504 0.4467327158788886 0.6550680571731262 1.0 0.7655252892381933 3 O75396,O15498 2
|
| 110 |
+
Longin domain [IPR010908] 0.6289101086598504 0.4467327158788886 0.6550680571731262 1.0 0.7655252892381933 3 O75396,O15498 2
|
| 111 |
+
EF hand associated, type-1 [IPR013566] 0.614219881500989 0.4158606263320394 0.6775119925476261 1.0 0.7773818222043279 2 Q8IXI1 1
|
| 112 |
+
EF hand associated, type-2 [IPR013567] 0.614219881500989 0.4158606263320394 0.6775119925476261 1.0 0.7773818222043279 2 Q8IXI1 1
|
| 113 |
+
MIRO domain [IPR020860] 0.614219881500989 0.4158606263320394 0.6775119925476261 1.0 0.7773818222043279 2 Q8IXI1 1
|
| 114 |
+
GYF domain [IPR003169] 0.6129032258064532 0.4117038664623369 0.6805564906789405 1.0 0.7794566164815113 2 O95400 1
|
| 115 |
+
EGF-like domain [IPR000742] 0.5329380764163305 0.410554012186051 0.6813995906969224 1.0 0.7796341608809252 4 Q04721,P07942,O94813 3
|
| 116 |
+
14-3-3 domain [IPR023410] 0.3991430454845158 0.3245130311572731 0.7455496581804859 1.0 0.8180597237704639 6 P27348,P31946,P62258,P63104,Q04917 5
|
| 117 |
+
NIPSNAP [IPR012577] 0.5789993416721473 0.3113686114036472 0.7555204131816688 1.0 0.8255729991525862 2 Q9BPW8 1
|
| 118 |
+
Serine hydroxymethyltransferase-like domain [IPR039429] 0.5757077024358063 0.3023579050934096 0.7623792407149717 1.0 0.8323465130230123 2 P34896 1
|
| 119 |
+
Glutathione S-transferase, C-terminal-like [IPR010987] 0.3449805974761165 0.2796843050140347 0.7797197207555466 1.0 0.8463457242898809 11 P78417 1
|
| 120 |
+
MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.5707740646313952 0.278137745258272 0.7809066218963334 1.0 0.8463457242898809 3 P04439 1
|
| 121 |
+
MHC class I, alpha chain, C-terminal [IPR010579] 0.5707740646313952 0.278137745258272 0.7809066218963334 1.0 0.8463457242898809 3 P04439 1
|
| 122 |
+
MHC class I-like antigen recognition-like [IPR011161] 0.5707740646313952 0.278137745258272 0.7809066218963334 1.0 0.8463457242898809 3 P04439 1
|
| 123 |
+
Immunoglobulin C1-set [IPR003597] 0.5707740646313952 0.278137745258272 0.7809066218963334 1.0 0.8463457242898809 3 P04439 1
|
| 124 |
+
Immunoglobulin I-set [IPR013098] 0.5552995391705089 0.2496086079939673 0.802890041054916 1.0 0.8660772812405895 2 Q8WX93 1
|
| 125 |
+
S100/CaBP-9k-type, calcium binding, subdomain [IPR013787] 0.5543120473996068 0.2471960724604582 0.8047564847288204 1.0 0.8666990673503208 2 P31949 1
|
| 126 |
+
Small GTP-binding protein domain [IPR005225] 0.2650125923949026 0.239416103095175 0.8107829445803789 1.0 0.8727249621134082 43 Q15907,Q969Q5,P61225,P61026,Q9NR31 5
|
| 127 |
+
Exocyst complex component EXOC2/Sec5, N-terminal domain [IPR039481] 0.5490454246214632 0.2345527546447525 0.8145558828874022 1.0 0.8752918349561263 2 Q96KP1 1
|
| 128 |
+
Exosome complex component, N-terminal domain [IPR025721] 0.542462146148784 0.2192833533088098 0.8264293284867223 1.0 0.8850338711012797 2 Q13868 1
|
| 129 |
+
Laminin-type EGF domain [IPR002049] 0.5325872284397648 0.1975094055812257 0.8434289218223627 1.0 0.8994197635670185 2 P07942 1
|
| 130 |
+
Laminin, N-terminal [IPR008211] 0.5325872284397648 0.1975094055812257 0.8434289218223627 1.0 0.8994197635670185 2 P07942 1
|
| 131 |
+
Domain of unknown function DUF5600 [IPR040990] 0.5240289664252817 0.1797494517762456 0.8573492687633022 1.0 0.9096486562141556 2 Q9H223 1
|
| 132 |
+
EH domain-containing protein, N-terminal [IPR031692] 0.5240289664252817 0.1797494517762456 0.8573492687633022 1.0 0.9096486562141556 2 Q9H223 1
|
| 133 |
+
CS domain [IPR007052] 0.3420650019157856 0.1594592259959996 0.8733070801678102 1.0 0.9246349522179754 9 Q9P035 1
|
| 134 |
+
eRF1 domain 1/Pelota-like [IPR005140] 0.5046082949308776 0.1433108810697478 0.8860446626858707 1.0 0.9343682794666934 2 Q9BRX2 1
|
| 135 |
+
eRF1 domain 2 [IPR005141] 0.5046082949308776 0.1433108810697478 0.8860446626858707 1.0 0.9343682794666934 2 Q9BRX2 1
|
| 136 |
+
eRF1 domain 3 [IPR005142] 0.5046082949308776 0.1433108810697478 0.8860446626858707 1.0 0.9343682794666934 2 Q9BRX2 1
|
| 137 |
+
Synaptotagmin-like mitochondrial-lipid-binding domain [IPR031468] 0.5039499670836096 0.1421697308947871 0.886945940144038 1.0 0.9343682794666934 2 Q9BSJ8 1
|
| 138 |
+
Extended synaptotagmin, C-terminal C2 domain [IPR037752] 0.5039499670836096 0.1421697308947871 0.886945940144038 1.0 0.9343682794666934 2 Q9BSJ8 1
|
| 139 |
+
Extended synaptotagmin, C2B domain [IPR037749] 0.5039499670836096 0.1421697308947871 0.886945940144038 1.0 0.9343682794666934 2 Q9BSJ8 1
|
| 140 |
+
Extended synaptotagmin, C2A domain [IPR037733] 0.5039499670836096 0.1421697308947871 0.886945940144038 1.0 0.9343682794666934 2 Q9BSJ8 1
|
| 141 |
+
Synaptotagmin, SMP domain [IPR039010] 0.5039499670836096 0.1421697308947871 0.886945940144038 1.0 0.9343682794666934 2 Q9BSJ8 1
|
| 142 |
+
Clp ATPase, C-terminal [IPR019489] 0.5019749835418057 0.1387831620577591 0.8896214999434715 1.0 0.936528180144986 2 Q9H078 1
|
| 143 |
+
AP complex, mu/sigma subunit [IPR022775] 0.3473983714647487 0.1295778678010423 0.8969004145321788 1.0 0.942492852270898 6 Q9Y2T2 1
|
| 144 |
+
Domain of unknown function DUF4217 [IPR025313] 0.4957208689927604 0.1284229453454184 0.8978142737427082 1.0 0.9430602242311996 2 Q9NVP1 1
|
| 145 |
+
COMM domain [IPR017920] 0.4944042132982245 0.1263120696399414 0.899484902590991 1.0 0.9440286826194256 2 Q9H0A8 1
|
| 146 |
+
GRAM domain [IPR004182] 0.4972011853802952 0.1176499674887013 0.9063450115088632 1.0 0.9483448800762374 3 Q66K14,Q969T9 2
|
| 147 |
+
Thioredoxin domain [IPR013766] 0.2683689470496647 0.1175619059808458 0.906414790193964 1.0 0.9483448800762374 25 P07237,Q96JJ7,Q9H1E5 3
|
| 148 |
+
RNA polymerase Rpb2, domain 7 [IPR007641] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9483448800762374 2 P30876 1
|
| 149 |
+
RNA polymerase, beta subunit, protrusion [IPR007644] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9483448800762374 2 P30876 1
|
| 150 |
+
RNA polymerase Rpb2, domain 3 [IPR007645] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9483448800762374 2 P30876 1
|
| 151 |
+
RNA polymerase Rpb2, domain 2 [IPR007642] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9483448800762374 2 P30876 1
|
| 152 |
+
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain [IPR007120] 0.4878209348255453 0.1161215152916007 0.9075562374250016 1.0 0.9483448800762374 2 P30876 1
|
| 153 |
+
Peptidase M41 [IPR000642] 0.4871626069782773 0.1151356422504906 0.9083376093149738 1.0 0.9485827953177488 2 Q96TA2 1
|
| 154 |
+
Heat shock chaperonin-binding [IPR006636] 0.4265480895915682 0.1092616965960962 0.9129949263461564 1.0 0.951869865334852 4 Q9NRR5,P31948,Q9UHD9 3
|
| 155 |
+
Potassium channel tetramerisation-type BTB domain [IPR003131] 0.479262672811062 0.1037707969247223 0.91735124200006 1.0 0.9554702038527207 2 Q96CX2 1
|
| 156 |
+
BRO1 domain [IPR004328] 0.4796624161576428 0.0893022655256237 0.9288416936364196 1.0 0.9648017921544688 3 Q8WUM4 1
|
| 157 |
+
STAT transcription factor, DNA-binding [IPR013801] 0.466754443712971 0.0875020936722851 0.9302724213066218 1.0 0.9650954531202386 2 P42224 1
|
| 158 |
+
STAT transcription factor, all-alpha domain [IPR013800] 0.466754443712971 0.0875020936722851 0.9302724213066218 1.0 0.9650954531202386 2 P42224 1
|
| 159 |
+
STAT transcription factor, protein interaction [IPR013799] 0.466754443712971 0.0875020936722851 0.9302724213066218 1.0 0.9650954531202386 2 P42224 1
|
| 160 |
+
Ribosomal protein S4/S9, N-terminal [IPR001912] 0.4598420013166578 0.0793926070693063 0.9367203487854984 1.0 0.9709859102494974 2 Q9NV31 1
|
| 161 |
+
FAD/NAD(P)-binding domain [IPR023753] 0.3397034596375631 0.0736231312005906 0.9413102650486578 1.0 0.9729444624806208 5 P00390,O95831,P22570,P09622 4
|
| 162 |
+
RuvB-like, AAA-lid domain [IPR041048] 0.4509545753785409 0.0698534742445866 0.9443102847941728 1.0 0.9748467205284094 2 Q9Y230 1
|
| 163 |
+
TIP49, P-loop domain [IPR010339] 0.4509545753785409 0.0698534742445866 0.9443102847941728 1.0 0.9748467205284094 2 Q9Y230 1
|
| 164 |
+
Ancestral coatomer element 1, Sec16/Sec31 [IPR024298] 0.4473337722185671 0.0662447338251204 0.9471829825249392 1.0 0.9774122266480756 2 O15027 1
|
| 165 |
+
Rpn11/EIF3F, C-terminal [IPR024969] 0.4021739130434794 0.0622109983245828 0.9503948040601248 1.0 0.9803254379712208 4 P51665,O00487,Q7L5N1 3
|
| 166 |
+
Heterogeneous nuclear ribonucleoprotein U, SPRY domain [IPR035778] 0.4560051519719069 0.0571413243604649 0.9544326181020616 1.0 0.9815224862891874 3 Q9BUJ2 1
|
| 167 |
+
Rab-GTPase-TBC domain [IPR000195] 0.3324546952224106 0.0569160432274301 0.954612074381966 1.0 0.9815224862891874 5 Q66K14,Q9BXI6,Q8TC07,Q9Y3P9 4
|
| 168 |
+
Ribosomal protein S5, N-terminal [IPR013810] 0.4282422646477968 0.0497229101535463 0.9603431993759924 1.0 0.9843571822730952 2 P82675 1
|
| 169 |
+
Ribosomal protein S5, C-terminal [IPR005324] 0.4282422646477968 0.0497229101535463 0.9603431993759924 1.0 0.9843571822730952 2 P82675 1
|
| 170 |
+
4Fe-4S ferredoxin-type, iron-sulphur binding domain [IPR017896] 0.4495959513029675 0.0495939377783053 0.9604459776412424 1.0 0.9843571822730952 3 P21912 1
|
| 171 |
+
SCP2 sterol-binding domain [IPR003033] 0.4487981560750693 0.0486882486247173 0.9611677410087412 1.0 0.9843571822730952 3 Q6YN16,P51659 2
|
| 172 |
+
Kinesin-associated [IPR032405] 0.426596445029627 0.0484859007866961 0.9613290007686888 1.0 0.9843571822730952 2 Q9NQT8 1
|
| 173 |
+
Kinesin-like KIF1-type [IPR022140] 0.426596445029627 0.0484859007866961 0.9613290007686888 1.0 0.9843571822730952 2 Q9NQT8 1
|
| 174 |
+
SET domain [IPR001214] 0.4471727536003965 0.046865935335276 0.9626200779115296 1.0 0.9848794468530944 3 O96028 1
|
| 175 |
+
PIN domain [IPR002716] 0.3880842659644528 0.026814253373805 0.9786078847576924 1.0 0.9933364513663788 2 Q9Y2L1 1
|
| 176 |
+
Kinesin-like [IPR022164] 0.4267369114257516 0.026497872716296 0.9788602303311456 1.0 0.9933364513663788 3 Q9NQT8,Q9Y3P9 2
|
| 177 |
+
Agenet-like domain [IPR008395] 0.4263152376094926 0.0261255676062418 0.9791571840193568 1.0 0.9933364513663788 3 Q06787 1
|
| 178 |
+
Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.4263152376094926 0.0261255676062418 0.9791571840193568 1.0 0.9933364513663788 3 Q06787 1
|
| 179 |
+
Fragile X-related 1 protein, C-terminal core [IPR022034] 0.4263152376094926 0.0261255676062418 0.9791571840193568 1.0 0.9933364513663788 3 Q06787 1
|
| 180 |
+
Fxr1, tudor domain [IPR041560] 0.4263152376094926 0.0261255676062418 0.9791571840193568 1.0 0.9933364513663788 3 Q06787 1
|
| 181 |
+
Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.3489137590520104 0.0157328055906912 0.9874475551558533 1.0 1.0 2 P51114 1
|
| 182 |
+
ELMO domain [IPR006816] 0.3466096115865726 0.015322646368728 0.9877747754137742 1.0 1.0 2 Q8IZ81 1
|
| 183 |
+
RNA-binding S4 domain [IPR002942] 0.4089562067830116 0.0123713027484272 0.9901293803222826 1.0 1.0 3 P46781,Q9NV31 2
|
| 184 |
+
PIK-related kinase [IPR014009] 0.3179723502304176 0.0117466039883336 0.9906277815703476 1.0 1.0 2 P42345 1
|
| 185 |
+
FATC domain [IPR003152] 0.3179723502304176 0.0117466039883336 0.9906277815703476 1.0 1.0 2 P42345 1
|
| 186 |
+
PIK-related kinase, FAT [IPR003151] 0.3179723502304176 0.0117466039883336 0.9906277815703476 1.0 1.0 2 P42345 1
|
| 187 |
+
Transcription factor IIS, N-terminal [IPR017923] 0.3166556945358817 0.0116374331846169 0.9907148813154658 1.0 1.0 2 Q96ST2 1
|
| 188 |
+
Lsm14-like, N-terminal [IPR025609] 0.2939433838051376 0.0102802079431563 0.9917977252736232 1.0 1.0 2 Q9BX40 1
|
| 189 |
+
DFDF domain [IPR025762] 0.2939433838051376 0.0102802079431563 0.9917977252736232 1.0 1.0 2 Q9BX40 1
|
| 190 |
+
FDF domain [IPR019050] 0.2939433838051376 0.0102802079431563 0.9917977252736232 1.0 1.0 2 Q9BX40 1
|
interpro_domain/selections.json
ADDED
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interpro_family/advanced/idx2term.json
ADDED
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| 1 |
+
{"0": "Mitochondrial carrier protein [IPR002067]", "1": "Syntaxin [IPR045242]"}
|
interpro_family/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/advanced/plot_1.png
ADDED
|
Git LFS Details
|
interpro_family/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"0": "Mitochondrial carrier protein [IPR002067]", "1": "Syntaxin [IPR045242]", "2": "Small GTPase [IPR001806]", "3": "Short-chain dehydrogenase/reductase SDR [IPR002347]", "4": "14-3-3 protein [IPR000308]"}
|