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longevity-db
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sc-human-blood-aging-atlas

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train · 2.98M rows

Unnamed: 0_DEMUX float64	barcode string	patient_DEMUX string	source_file_DEMUX string	is_cell_TCR bool	contig_id_TCR string	high_confidence_TCR bool	length_TCR float64	chain_TCR string	v_gene_TCR string	d_gene_TCR string	j_gene_TCR string	c_gene_TCR string	full_length_TCR bool	productive_TCR bool	fwr1_TCR string	fwr1_nt_TCR string	cdr1_TCR string	cdr1_nt_TCR string	fwr2_TCR string	fwr2_nt_TCR string	cdr2_TCR string	cdr2_nt_TCR string	fwr3_TCR string	fwr3_nt_TCR string	cdr3_TCR string	cdr3_nt_TCR string	fwr4_TCR string	fwr4_nt_TCR string	reads_TCR float64	umis_TCR float64	raw_clonotype_id_TCR string	raw_consensus_id_TCR string	exact_subclonotype_id_TCR float64	source_file_TCR string	is_cell_BCR bool	contig_id_BCR string	high_confidence_BCR bool	length_BCR float64	chain_BCR string	v_gene_BCR string	d_gene_BCR string	j_gene_BCR string	c_gene_BCR string	full_length_BCR bool	productive_BCR bool	fwr1_BCR string	fwr1_nt_BCR string	cdr1_BCR string	cdr1_nt_BCR string	fwr2_BCR string	fwr2_nt_BCR string	cdr2_BCR string	cdr2_nt_BCR string	fwr3_BCR string	fwr3_nt_BCR string	cdr3_BCR string	cdr3_nt_BCR string	fwr4_BCR string	fwr4_nt_BCR string	reads_BCR float64	umis_BCR float64	raw_clonotype_id_BCR string	raw_consensus_id_BCR string	exact_subclonotype_id_BCR float64	source_file_BCR string	batch string	full_barcode string	orig.ident string	nCount_RNA float64	nFeature_RNA float64	nCount_HTO float64	nFeature_HTO float64	percent.mt float64	percent.ribo float64	log2_nCount float64	log2_nFeature float64	log2_mt float64	Donor_id string	Age_group string	Sex string	Age float64	Tube_id string	Batch string	File_name string	Cluster_names string	Cluster_numbers float64	cell_type_annotation string
1	AAACCTGAGAAGCCCA-1	G20	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGAAGCCCA-1_contig_1	true	466	TRB	TRBV2	null	TRBJ2-5	TRBC2	true	true	EPEVTQTPSHQVTQMGQEVILRCVPI	GAACCTGAAGTCACCCAGACTCCCAGCCATCAGGTCACACAGATGGGACAGGAAGTGATCTTGCGCTGTGTCCCCATC	SNHLY	TCTAATCACTTATAC	FYWYRQILGQKVEFLVS	TTCTATTGGTACAGACAAATCTTGGGGCAGAAAGTCGAGTTTCTGGTTTCC	FYNNEI	TTTTATAATAATGAAATC	SEKSEIFDDQFSVERPDGSNFTLKIRSTKLEDSAMYF	TCAGAGAAGTCTGAAATATTCGATGATCAATTCTCAGTTGAAAGGCCTGATGGATCAAATTTCACTCTGAAGATCCGGTCCACAAAGCTGGAGGACTCAGCCATGTACTTC	CASGHEETQYF	TGTGCCAGCGGCCATGAGGAAACCCAGTACTTC	GPGTRLLVL	GGGCCAGGCACGCGGCTCCTGGTGCTCG	7,078	9	clonotype1392	clonotype1392_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGAGAAGCCCA-1	SeuratProject	4,145	1,745	1,181	20	1.302774	29.529554	12.017156	10.769011	0.381587	A20	A	Male	27	G20	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
2	AAACCTGAGAATAGGG-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGAATAGGG-1_contig_1	true	508	TRB	TRBV14	null	TRBJ1-5	TRBC1	true	true	EAGVTQFPSHSVIEKGQTVTLRCDPI	GAAGCTGGAGTTACTCAGTTCCCCAGCCACAGCGTAATAGAGAAGGGCCAGACTGTGACTCTGAGATGTGACCCAATT	SGHDN	TCTGGACATGATAAT	LYWYRRVMGKEIKFLLH	CTTTATTGGTATCGACGTGTTATGGGAAAAGAAATAAAATTTCTGTTACAT	FVKESK	TTTGTGAAAGAGTCTAAA	QDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYF	CAGGATGAATCCGGTATGCCCAACAATCGATTCTTAGCTGAAAGGACTGGAGGGACGTATTCTACTCTGAAGGTGCAGCCTGCAGAACTGGAGGATTCTGGAGTTTATTTC	CASSQGRGGPQHF	TGTGCCAGCAGCCAAGGCCGAGGGGGGCCCCAGCATTTT	GDGTRLSIL	GGTGATGGGACTCGACTCTCCATCCTAG	5,026	6	clonotype4162	clonotype4162_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,b_cells,myeloid_cells,conventional_cd8_t_cells
4	AAACCTGAGAGTAATC-1	L07	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGAGAGTAATC-1	SeuratProject	1,921	960	998	20	0.41645	11.764706	10.907642	9.906891	-1.263786	E07	E	Male	80	L07	AS044	ALAW-AS044-1	Myeloid cells	6	x,y,gd_t_cells,cd4_t_cells,myeloid_cells,nk_cells,conventional_cd8_t_cells
1	AAACCTGAGAGTTGGC-1	G23	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGAGTTGGC-1	SeuratProject	2,017	1,096	1,838	20	2.429351	16.559246	10.977995	10.098032	1.280571	A23	A	Male	27	G23	AS044	ALAW-AS044-3	Myeloid cells	6	y,cd4_t_cells,myeloid_cells
5	AAACCTGAGATCGGGT-1	G23	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells,conventional_cd8_t_cells
6	AAACCTGAGCAATCTC-1	G23	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGCAATCTC-1_contig_1	true	498	TRB	TRBV20-1	null	TRBJ2-3	TRBC2	true	true	GAVVSQHPSWVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCTGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKQSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAACAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSASRQDFTDTQYF	TGCAGTGCTAGTAGACAGGATTTCACAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	10,374	11	clonotype40	clonotype40_consensus_1	2	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGAGCAATCTC-1	SeuratProject	3,651	1,878	2,035	20	0.438236	13.174473	11.834076	10.874981	-1.19022	A23	A	Male	27	G23	AS044	ALAW-AS044-1	TRAV1-2- CD8+ T cells	1	y,cd4_t_helper_memory_cells,cd4_t_cells,conventional_cd8_t_cells
2	AAACCTGAGCGATATA-1	L07	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGCGATATA-1_contig_1	true	465	TRA	TRAV9-2	null	TRAJ39	TRAC	true	true	GNSVTQMEGPVTLSEEAFLTINCTYT	GGAAATTCAGTGACCCAGATGGAAGGGCCAGTGACTCTCTCAGAAGAGGCCTTCCTGACTATAAACTGCACGTACACA	ATGYPS	GCCACAGGATACCCTTCC	LFWYVQYPGEGLQLLLK	CTTTTCTGGTATGTCCAATATCCTGGAGAAGGTCTACAGCTCCTCCTGAAA	ATKADDK	GCCACGAAGGCTGATGACAAG	GSNKGFEATYRKETTSFHLEKGSVQVSDSAVYF	GGAAGCAACAAAGGTTTTGAAGCCACATACCGTAAAGAAACCACTTCTTTCCACTTGGAGAAAGGCTCAGTTCAAGTGTCAGACTCAGCGGTGTACTTC	CALNNNAGNMLTF	TGTGCTCTGAATAATAATGCAGGCAACATGCTCACCTTT	GGGTRLMVKP	GGAGGGGGAACAAGGTTAATGGTCAAACCCC	7,024	3	clonotype3771	clonotype3771_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGCGATATA-1	SeuratProject	5,365	1,930	1,062	20	1.09972	35.340168	12.389362	10.914385	0.137137	E07	E	Male	80	L07	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,conventional_cd8_t_cells
7	AAACCTGAGCGCCTTG-1	doublet	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGCGCCTTG-1_contig_1	true	527	TRB	TRBV20-1	TRBD2	TRBJ2-7	TRBC2	true	true	GAVVSQHPSRVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCAGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKQSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAACAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSASGTSGVTAYEQYF	TGCAGTGCTAGCGGGACTAGCGGGGTGACGGCCTACGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	2,988	6	clonotype3387	clonotype3387_consensus_2	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,myeloid_cells
3	AAACCTGAGCGTAATA-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGCGTAATA-1_contig_1	true	515	TRB	TRBV6-4	null	TRBJ1-4	TRBC1	true	true	IAGITQAPTSQILAAGRRMTLRCTQD	ATTGCTGGGATCACCCAGGCACCAACATCTCAGATCCTGGCAGCAGGACGGCGCATGACACTGAGATGTACCCAGGAT	MRHNA	ATGAGACATAATGCC	MYWYRQDLGLGLRLIHY	ATGTACTGGTATAGACAAGATCTAGGACTGGGGCTAAGGCTCATCCATTAT	SNTAGT	TCAAATACTGCAGGTACC	TGKGEVPDGYSVSRANTDDFPLTLASAVPSQTSVYF	ACTGGCAAAGGAGAAGTCCCTGATGGTTATAGTGTCTCCAGAGCAAACACAGATGATTTCCCCCTCACGTTGGCGTCTGCTGTACCCTCTCAGACATCTGTGTACTTC	CASSDSTGKLFF	TGTGCCAGCAGTGACTCGACTGGAAAACTGTTTTTT	GSGTQLSVL	GGCAGTGGAACCCAGCTCTCTGTCTTGG	12,294	7	clonotype41	clonotype41_consensus_1	3	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
4	AAACCTGAGCTAACTC-1	doublet	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGCTAACTC-1_contig_1	true	524	TRB	TRBV20-1	TRBD2	TRBJ2-1	TRBC2	true	true	GAVVSQHPSRVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCAGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKKSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAAAAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSAPTGTSGSNEQFF	TGCAGTGCTCCAACCGGGACTAGCGGGAGCAATGAGCAGTTCTTC	GPGTRLTVL	GGGCCAGGGACACGGCTCACCGTGCTAG	21,254	10	clonotype2436	clonotype2436_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells
1	AAACCTGAGCTATGCT-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGAGCTATGCT-1_contig_1	true	521	TRB	TRBV20-1	null	TRBJ2-3	TRBC2	true	true	GAVVSQHPSRVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCAGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKKSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAAAAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSATLAGGADTQYF	TGCAGTGCTACACTAGCGGGAGGAGCAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	14,712	16	clonotype1111	clonotype1111_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGAGCTATGCT-1	SeuratProject	2,470	1,199	2,015	20	1.45749	23.562753	11.270295	10.227616	0.543486	A23	A	Male	27	G23	AS044	ALAW-AS044-2	TRAV1-2- CD8+ T cells	1	y,cd4_t_cells,myeloid_cells,conventional_cd8_t_cells
8	AAACCTGAGCTCCTCT-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGCTCCTCT-1_contig_1	true	499	TRB	TRBV7-3	null	TRBJ2-3	TRBC2	true	true	GAGVSQTPSNKVTEKGKYVELRCDPI	GGTGCTGGAGTCTCCCAGACCCCCAGTAACAAGGTCACAGAGAAGGGAAAATATGTAGAGCTCAGGTGTGATCCAATT	SGHTA	TCAGGTCATACTGCC	LYWYRQSLGQGPEFLIY	CTTTACTGGTACCGACAAAGCCTGGGGCAGGGCCCAGAGTTTCTAATTTAC	FQGTGA	TTCCAAGGCACGGGTGCG	ADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYL	GCAGATGACTCAGGGCTGCCCAACGATCGGTTCTTTGCAGTCAGGCCTGAGGGATCCGTCTCTACTCTGAAGATCCAGCGCACAGAGCGGGGGGACTCAGCCGTGTATCTC	CASSPNRVDTQYF	TGTGCCAGCAGCCCAAACAGGGTGGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	4,276	3	clonotype3095	clonotype3095_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	x,y,gd_t_cells,myeloid_cells,conventional_cd8_t_cells
2	AAACCTGAGCTGATAA-1	doublet	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells
5	AAACCTGAGGAACTGC-1	G20	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGGAACTGC-1_contig_1	true	508	TRB	TRBV4-3	TRBD1	TRBJ2-7	TRBC2	true	true	ETGVTQTPRHLVMGMTNKKSLKCEQH	GAAACGGGAGTTACGCAGACACCAAGACACCTGGTCATGGGAATGACAAATAAGAAGTCTTTGAAATGTGAACAACAT	LGHNA	CTGGGTCATAACGCT	MYWYKQSAKKPLELMFV	ATGTATTGGTACAAGCAAAGTGCTAAGAAGCCACTGGAGCTCATGTTTGTC	YSLEER	TACAGTCTTGAAGAACGG	VENNSVPSRFSPECPNSSHLFLHLHTLQPEDSALYL	GTTGAAAACAACAGTGTGCCAAGTCGCTTCTCACCTGAATGCCCCAACAGCTCTCACTTATTCCTTCACCTACACACCCTGCAGCCAGAAGACTCGGCCCTGTATCTC	CASSYGQGTEQYF	TGCGCCAGCAGCTACGGACAGGGGACGGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	24,322	10	clonotype2034	clonotype2034_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGGAACTGC-1	SeuratProject	3,980	1,509	1,557	20	1.180905	37.462312	11.958553	10.559377	0.239892	A20	A	Male	27	G20	AS044	ALAW-AS044-3	TRAV1-2- CD8+ T cells	1	x,y,gd_t_cells,cd4_t_cells,myeloid_cells,conventional_cd8_t_cells
3	AAACCTGAGGACTGGT-1	L13	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGAGGACTGGT-1_contig_1	true	650	TRA	TRAV8-3	null	TRAJ18	TRAC	true	true	AQSVTQPDIHITVSEGASLELRCNYS	GCCCAGTCAGTGACCCAGCCTGACATCCACATCACTGTCTCTGAAGGAGCCTCACTGGAGTTGAGATGTAACTATTCC	YGATPY	TATGGGGCAACACCTTAT	LFWYVQSPGQGLQLLLK	CTCTTCTGGTATGTCCAGTCCCCCGGCCAAGGCCTCCAGCTGCTCCTGAAG	YFSGDTLV	TACTTTTCAGGAGACACTCTGGTT	QGIKGFEAEFKRSQSSFNLRKPSVHWSDAAEYF	CAAGGCATTAAAGGCTTTGAGGCTGAATTTAAGAGGAGTCAATCTTCCTTCAATCTGAGGAAACCCTCTGTGCATTGGAGTGATGCTGCTGAGTACTTC	CAVPGRGSTLGRLYF	TGTGCTGTCCCGGGAAGAGGCTCAACCCTGGGGAGGCTATACTTT	GRGTQLTVWP	GGAAGAGGAACTCAGTTGACTGTCTGGCCTG	2,392	3	clonotype2486	clonotype2486_consensus_3	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGAGGACTGGT-1	SeuratProject	6,238	2,183	2,277	20	1.170247	34.722668	12.606868	11.092096	0.226813	E13	E	Male	79	L13	AS044	ALAW-AS044-2	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells
9	AAACCTGAGGCAGGTT-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGGCAGGTT-1_contig_1	true	477	TRB	TRBV9	null	TRBJ2-3	TRBC2	true	true	DSGVTQTPKHLITATGQRVTLRCSPR	GATTCTGGAGTCACACAAACCCCAAAGCACCTGATCACAGCAACTGGACAGCGAGTGACGCTGAGATGCTCCCCTAGG	SGDLS	TCTGGAGACCTCTCT	VYWYQQSLDQGLQFLIQ	GTGTACTGGTACCAACAGAGCCTGGACCAGGGCCTCCAGTTCCTCATTCAG	YYNGEE	TATTATAATGGAGAAGAG	RAKGNILERFSAQQFPDLHSELNLSSLELGDSALYF	AGAGCAAAAGGAAACATTCTTGAACGATTCTCCGCACAACAGTTCCCTGACTTGCACTCTGAACTAAACCTGAGCTCTCTGGAGCTGGGGGACTCAGCTTTGTATTTC	CASSAGAGTNTQYF	TGTGCCAGCAGCGCCGGGGCGGGAACCAATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	2,784	4	clonotype4533	clonotype4533_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells
6	AAACCTGAGGCTACGA-1	L15	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGGCTACGA-1_contig_1	true	514	TRB	TRBV12-4	TRBD1	TRBJ1-5	TRBC1	true	true	DAGVIQSPRHEVTEMGQEVTLRCKPI	GATGCTGGAGTTATCCAGTCACCCCGGCACGAGGTGACAGAGATGGGACAAGAAGTGACTCTGAGATGTAAACCAATT	SGHDY	TCAGGACACGACTAC	LFWYRQTMMRGLELLIY	CTTTTCTGGTACAGACAGACCATGATGCGGGGACTGGAGTTGCTCATTTAC	FNNNVP	TTTAACAACAACGTTCCG	IDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYF	ATAGATGATTCAGGGATGCCCGAGGATCGATTCTCAGCTAAGATGCCTAATGCATCATTCTCCACTCTGAAGATCCAGCCCTCAGAACCCAGGGACTCAGCTGTGTACTTC	CASSLRAGGTQPQHF	TGTGCCAGCAGTTTAAGGGCAGGGGGCACTCAGCCCCAGCATTTT	GDGTRLSIL	GGTGATGGGACTCGACTCTCCATCCTAG	10,554	5	clonotype6496	clonotype6496_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGGCTACGA-1	SeuratProject	5,701	1,887	1,263	20	2.087353	39.554464	12.476999	10.881879	1.061675	E15	E	Male	78	L15	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_cells,conventional_cd8_t_cells
4	AAACCTGAGGGCATGT-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGAGGGCATGT-1_contig_1	true	487	TRA	TRAV17	null	TRAJ54	TRAC	true	true	SQQGEEDPQALSIQEGENATMNCSYK	AGTCAACAGGGAGAAGAGGATCCTCAGGCCTTGAGCATCCAGGAGGGTGAAAATGCCACCATGAACTGCAGTTACAAA	TSINN	ACTAGTATAAACAAT	LQWYRQNSGRGLVHLIL	TTACAGTGGTATAGACAAAATTCAGGTAGAGGCCTTGTCCACCTAATTTTA	IRSNERE	ATACGTTCAAATGAAAGAGAG	KHSGRLRVTLDTSKKSSSLLITASRAADTASYF	AAACACAGTGGAAGATTAAGAGTCACGCTTGACACTTCCAAGAAAAGCAGTTCCTTGTTGATCACGGCTTCCCGGGCAGCAGACACTGCTTCTTACTTC	CATQGAQKLVF	TGTGCTACGCAGGGAGCCCAGAAGCTGGTATTT	GQGTRLTINP	GGCCAAGGAACCAGGCTGACTATCAACCCAA	562	1	clonotype6123	clonotype6123_consensus_2	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGAGGGCATGT-1	SeuratProject	3,217	1,119	1,376	20	0.932546	45.166304	11.6515	10.127994	-0.100753	A23	A	Male	27	G23	AS044	ALAW-AS044-2	CD4+ T cells	0	y,cd4_t_cells,nk_cells
11	AAACCTGAGGGTTTCT-1	G15	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,conventional_cd8_t_cells
12	AAACCTGAGGTACTCT-1	L15	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGAGGTACTCT-1	SeuratProject	3,443	1,490	1,713	20	1.916933	30.874238	11.74945	10.541097	0.9388	E15	E	Male	78	L15	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,b_cells,cd4_t_cells
7	AAACCTGAGGTGACCA-1	L15	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGGTGACCA-1	SeuratProject	5,098	2,207	2,121	20	3.707336	20.655159	12.315716	11.107871	1.890383	E15	E	Male	78	L15	AS044	ALAW-AS044-3	gd T cells	3	x,y,gd_t_cells,cd4_t_cells,conventional_cd8_t_cells
5	AAACCTGAGGTTCCTA-1	doublet	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGAGGTTCCTA-1_contig_1	true	495	TRA	TRAV9-2	null	TRAJ28	TRAC	true	true	GNSVTQMEGPVTLSEEAFLTINCTYT	GGAAATTCAGTGACCCAGATGGAAGGGCCAGTGACTCTCTCAGAAGAGGCCTTCCTGACTATAAACTGCACGTACACA	ATGYPS	GCCACAGGATACCCTTCC	LFWYVQYPGEGLQLLLK	CTTTTCTGGTATGTCCAATATCCTGGAGAAGGTCTACAGCTCCTCCTGAAA	ATKADDK	GCCACGAAGGCTGATGACAAG	GSNKGFEATYRKETTSFHLEKGSVQVSDSAVYF	GGAAGCAACAAAGGTTTTGAAGCCACATACCGTAAAGAAACCACTTCTTTCCACTTGGAGAAAGGCTCAGTTCAAGTGTCAGACTCAGCGGTGTACTTC	CALKDGAGSYQLTF	TGTGCTCTGAAGGATGGGGCTGGGAGTTACCAACTCACTTTC	GKGTKLSVIP	GGGAAGGGGACCAAACTCTCGGTCATACCAA	4,550	4	clonotype7258	clonotype7258_consensus_2	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,myeloid_cells
6	AAACCTGAGTACGTTC-1	covid	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGAGTACGTTC-1_contig_1	true	502	TRB	TRBV7-2	null	TRBJ2-1	TRBC2	true	true	GAGVSQSPSNKVTEKGKDVELRCDPI	GGAGCTGGAGTCTCCCAGTCCCCCAGTAACAAGGTCACAGAGAAGGGAAAGGATGTAGAGCTCAGGTGTGATCCAATT	SGHTA	TCAGGTCATACTGCC	LYWYRQSLGQGLEFLIY	CTTTACTGGTACCGACAGAGCCTGGGGCAGGGCCTGGAGTTTTTAATTTAC	FQGNSA	TTCCAAGGCAACAGTGCA	PDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYL	CCAGACAAATCAGGGCTGCCCAGTGATCGCTTCTCTGCAGAGAGGACTGGGGGATCCGTCTCCACTCTGACGATCCAGCGCACACAGCAGGAGGACTCGGCCGTGTATCTC	CASSLVSVSYNEQFF	TGTGCCAGCAGCTTAGTTTCTGTCTCCTACAATGAGCAGTTCTTC	GPGTRLTVL	GGGCCAGGGACACGGCTCACCGTGCTAG	10,456	10	clonotype6765	clonotype6765_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells
13	AAACCTGAGTCCGTAT-1	L07	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGAGTCCGTAT-1	SeuratProject	3,574	1,902	897	20	0	16.564074	11.803324	10.893302	null	E07	E	Male	80	L07	AS044	ALAW-AS044-1	NK cells	5	x,y,gd_t_cells,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells,nk_cells,conventional_cd8_t_cells
8	AAACCTGAGTCGAGTG-1	G20	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGAGTCGAGTG-1_contig_1	true	491	TRA	TRAV38-2/DV8	null	TRAJ58	TRAC	true	true	AQTVTQSQPEMSVQEAETVTLSCTYD	GCTCAGACAGTCACTCAGTCTCAACCAGAGATGTCTGTGCAGGAGGCAGAGACCGTGACCCTGAGCTGCACATATGAC	TSESDYY	ACCAGTGAGAGTGATTATTAT	LFWYKQPPSRQMILVIR	TTATTCTGGTACAAGCAGCCTCCCAGCAGGCAGATGATTCTCGTTATTCGC	QEAYKQQN	CAAGAAGCTTATAAGCAACAGAAT	ATENRFSVNFQKAAKSFSLKISDSQLGDAAMYF	GCAACAGAGAATCGTTTCTCTGTGAACTTCCAGAAAGCAGCCAAATCCTTCAGTCTCAAGATCTCAGACTCACAGCTGGGGGATGCCGCGATGTATTTC	CAYKRTSGSRLTF	TGTGCTTATAAAAGAACCAGTGGCTCTAGGTTGACCTTT	GEGTQLTVNP	GGGGAAGGAACACAGCTCACAGTGAATCCTG	15,714	9	clonotype6008	clonotype6008_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGAGTCGAGTG-1	SeuratProject	4,512	1,779	1,813	20	0.975177	32.513298	12.139551	10.796851	-0.036264	A20	A	Male	27	G20	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells
7	AAACCTGAGTGTACCT-1	doublet	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,conventional_cd8_t_cells
14	AAACCTGAGTTCGCGC-1	G15	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGAGTTCGCGC-1_contig_1	true	559	TRA	TRAV16	null	TRAJ52	TRAC	true	true	AQRVTQPEKLLSVFKGAPVELKCNYS	GCCCAGAGAGTGACTCAGCCCGAGAAGCTCCTCTCTGTCTTTAAAGGGGCCCCAGTGGAGCTGAAGTGCAACTATTCC	YSGSPE	TATTCTGGGAGTCCTGAA	LFWYVQYSRQRLQLLLR	CTCTTCTGGTATGTCCAGTACTCCAGACAACGCCTCCAGTTACTCTTGAGA	HISR	CACATCTCTAGA	ESIKGFTADLNKGETSFHLKKPFAQEEDSAMYY	GAGAGCATCAAAGGCTTCACTGCTGACCTTAACAAAGGCGAGACATCTTTCCACCTGAAGAAACCATTTGCTCAAGAGGAAGACTCAGCCATGTATTAC	CALLPGTSYGKLTF	TGTGCTCTACTTCCTGGTACTAGCTATGGAAAGCTGACATTT	GQGTILTVHP	GGACAAGGGACCATCTTGACTGTCCATCCAA	2,126	3	clonotype5038	clonotype5038_consensus_2	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,b_cells
8	AAACCTGCAAGAAAGG-1	L07	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGCAAGAAAGG-1_contig_1	true	510	TRB	TRBV12-5	null	TRBJ2-7	TRBC2	true	true	DARVTQTPRHKVTEMGQEVTMRCQPI	GATGCTAGAGTCACCCAGACACCAAGGCACAAGGTGACAGAGATGGGACAAGAAGTAACAATGAGATGTCAGCCAATT	LGHNT	TTAGGCCACAATACT	VFWYRQTMMQGLELLAY	GTTTTCTGGTACAGACAGACCATGATGCAAGGACTGGAGTTGCTGGCTTAC	FRNRAP	TTCCGCAACCGGGCTCCT	LDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYF	CTAGATGATTCGGGGATGCCGAAGGATCGATTCTCAGCAGAGATGCCTGATGCAACTTTAGCCACTCTGAAGATCCAGCCCTCAGAACCCAGGGACTCAGCTGTGTATTTT	CASGFVGGEQYF	TGTGCTAGTGGTTTCGTTGGTGGCGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	5,628	6	clonotype226	clonotype226_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGCAAGAAAGG-1	SeuratProject	5,260	1,976	2,502	20	0.912548	32.376426	12.360847	10.948367	-0.132028	E07	E	Male	80	L07	AS044	ALAW-AS044-2	TRAV1-2- CD8+ T cells	1	y,conventional_cd8_t_cells
9	AAACCTGCAAGCGAGT-1	L15	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCAAGCGAGT-1_contig_1	true	523	TRA	TRAV17	null	TRAJ10	TRAC	true	true	SQQGEEDPQALSIQEGENATMNCSYK	AGTCAACAGGGAGAAGAGGATCCTCAGGCCTTGAGCATCCAGGAGGGTGAAAATGCCACCATGAACTGCAGTTACAAA	TSINN	ACTAGTATAAACAAT	LQWYRQNSGRGLVHLIL	TTACAGTGGTATAGACAAAATTCAGGTAGAGGCCTTGTCCACCTAATTTTA	IRSNERE	ATACGTTCAAATGAAAGAGAG	KHSGRLRVTLDTSKKSSSLLITASRAADTASYF	AAACACAGTGGAAGATTAAGAGTCACGCTTGACACTTCCAAGAAAAGCAGTTCCTTGTTGATCACGGCTTCCCGGGCAGCAGACACTGCTTCTTACTTC	CATDPLYELTGGGNKLTF	TGTGCTACGGACCCGTTGTATGAGCTCACGGGAGGAGGAAACAAACTCACCTTT	GTGTQLKVEL	GGGACAGGCACTCAGCTAAAAGTGGAACTCA	3,878	3	clonotype3	clonotype3_consensus_3	5	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGCAAGCGAGT-1	SeuratProject	4,046	1,548	3,039	20	2.545724	35.022244	11.982281	10.59619	1.348076	E15	E	Male	78	L15	AS044	ALAW-AS044-3	CD4+ T cells	0	y,b_cells,cd4_t_cells,myeloid_cells,conventional_cd8_t_cells
9	AAACCTGCAAGGTGTG-1	G20	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGCAAGGTGTG-1_contig_1	true	507	TRB	TRBV12-3	TRBD1	TRBJ2-2	TRBC2	true	true	DAGVIQSPRHEVTEMGQEVTLRCKPI	GATGCTGGAGTTATCCAGTCACCCCGCCATGAGGTGACAGAGATGGGACAAGAAGTGACTCTGAGATGTAAACCAATT	SGHNS	TCAGGCCACAACTCC	LFWYRQTMMRGLELLIY	CTTTTCTGGTACAGACAGACCATGATGCGGGGACTGGAGTTGCTCATTTAC	FNNNVP	TTTAACAACAACGTTCCG	IDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYF	ATAGATGATTCAGGGATGCCCGAGGATCGATTCTCAGCTAAGATGCCTAATGCATCATTCTCCACTCTGAAGATCCAGCCCTCAGAACCCAGGGACTCAGCTGTGTACTTC	CASRSGKPGTGELFF	TGTGCCAGCAGGTCCGGGAAACCGGGCACCGGGGAGCTGTTTTTT	GEGSRLTVL	GGAGAAGGCTCTAGGCTGACCGTACTGG	23,246	21	clonotype6518	clonotype6518_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGCAAGGTGTG-1	SeuratProject	4,863	1,813	1,277	20	2.200288	33.497841	12.247631	10.824163	1.137692	A20	A	Male	27	G20	AS044	ALAW-AS044-2	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells
15	AAACCTGCAATGTAAG-1	G15	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGCAATGTAAG-1_contig_1	true	470	TRB	TRBV10-3	null	TRBJ2-7	TRBC2	true	true	DAGITQSPRHKVTETGTPVTLRCHQT	GATGCTGGAATCACCCAGAGCCCAAGACACAAGGTCACAGAGACAGGAACACCAGTGACTCTGAGATGTCACCAGACT	ENHRY	GAGAACCACCGCTAT	MYWYRQDPGHGLRLIHY	ATGTACTGGTATCGACAAGACCCGGGGCATGGGCTGAGGCTGATCCATTAC	SYGVKD	TCATATGGTGTTAAAGAT	TDKGEVSDGYSVSRSKTEDFLLTLESATSSQTSVYF	ACTGACAAAGGAGAAGTCTCAGATGGCTATAGTGTCTCTAGATCAAAGACAGAGGATTTCCTCCTCACTCTGGAGTCCGCTACCAGCTCCCAGACATCTGTGTACTTC	CAISSGTYYEQYF	TGTGCCATCAGTTCCGGGACCTACTACGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	3,508	6	clonotype2928	clonotype2928_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGCAATGTAAG-1	SeuratProject	2,081	950	1,776	20	1.489668	35.655935	11.023061	9.891784	0.574991	A15	A	Male	26	G15	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
11	AAACCTGCACAAGCCC-1	L15	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
12	AAACCTGCACGCGAAA-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,b_cells
13	AAACCTGCACTGAAGG-1	L07	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCACTGAAGG-1_contig_1	true	589	TRA	TRAV41	null	TRAJ41	TRAC	true	true	KNEVEQSPQNLTAQEGEFITINCSYS	AAAAATGAAGTGGAGCAGAGTCCTCAGAACCTGACTGCCCAGGAAGGAGAATTTATCACAATCAACTGCAGTTACTCG	VGISA	GTAGGAATAAGTGCC	LHWLQQHPGGGIVSLFM	TTACACTGGCTGCAACAGCATCCAGGAGGAGGCATTGTTTCCTTGTTTATG	LSSGK	CTGAGCTCAGGGAAG	KKHGRLIATINIQEKHSSLHITASHPRDSAVYI	AAGAAGCATGGAAGATTAATTGCCACAATAAACATACAGGAAAAGCACAGCTCCCTGCACATCACAGCCTCCCATCCCAGAGACTCTGCCGTCTACATC	CAVRSTGYALNF	TGTGCTGTCAGGTCCACCGGGTATGCACTCAACTTC	GKGTSLLVTP	GGCAAAGGCACCTCGCTGTTGGTCACACCCC	10,878	5	clonotype2209	clonotype2209_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGCACTGAAGG-1	SeuratProject	3,542	1,223	1,559	20	0.338792	44.014681	11.790348	10.256209	-1.56153	E07	E	Male	80	L07	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
16	AAACCTGCAGCGATCC-1	L15	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGCAGCGATCC-1_contig_1	true	472	TRB	TRBV28	TRBD1	TRBJ2-5	TRBC2	true	true	DVKVTQSSRYLVKRTGEKVFLECVQD	GATGTGAAAGTAACCCAGAGCTCGAGATATCTAGTCAAAAGGACGGGAGAGAAAGTTTTTCTGGAATGTGTCCAGGAT	MDHEN	ATGGACCATGAAAAT	MFWYRQDPGLGLRLIYF	ATGTTCTGGTATCGACAAGACCCAGGTCTGGGGCTACGGCTGATCTATTTC	SYDVKM	TCATATGATGTTAAAATG	KEKGDIPEGYSVSREKKERFSLILESASTNQTSMYL	AAAGAAAAAGGAGATATTCCTGAGGGGTACAGTGTCTCTAGAGAGAAGAAGGAGCGCTTCTCCCTGATTCTGGAGTCCGCCAGCACCAACCAGACATCTATGTACCTC	CASTPQGARGETQYF	TGTGCCAGCACCCCACAGGGGGCACGGGGGGAGACCCAGTACTTC	GPGTRLLVL	GGGCCAGGCACGCGGCTCCTGGTGCTCG	4,008	6	clonotype5541	clonotype5541_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGCAGCGATCC-1	SeuratProject	5,116	2,016	1,155	20	1.505082	30.863956	12.320801	10.97728	0.589842	E15	E	Male	78	L15	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,b_cells,cd4_t_cells
14	AAACCTGCAGTGGAGT-1	L13	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCAGTGGAGT-1_contig_1	true	532	TRB	TRBV7-8	TRBD1	TRBJ2-7	TRBC2	true	true	GAGVSQSPRYKVAKRGQDVALRCDPI	GGTGCTGGAGTCTCCCAGTCCCCTAGGTACAAAGTCGCAAAGAGAGGACAGGATGTAGCTCTCAGGTGTGATCCAATT	SGHVS	TCGGGTCATGTATCC	LFWYQQALGQGPEFLTY	CTTTTTTGGTACCAACAGGCCCTGGGGCAGGGGCCAGAGTTTCTGACTTAT	FQNEAQ	TTCCAGAATGAAGCTCAA	LDKSGLPSDRFFAERPEGSVSTLKIQRTQQEDSAVYL	CTAGACAAATCGGGGCTGCCCAGTGATCGCTTCTTTGCAGAAAGGCCTGAGGGATCCGTCTCCACTCTGAAGATCCAGCGCACACAGCAGGAGGACTCCGCCGTGTATCTC	CASSMERGANSYEQYF	TGTGCCAGCAGCATGGAGCGGGGGGCGAACTCCTACGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	18,764	10	clonotype2	clonotype2_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	true	AAACCTGCAGTGGAGT-1_contig_1	true	592	IGH	IGHV4-39	null	IGHJ4	IGHM	true	true	QLQLQESGPGLVKPSETLSLTCTVS	CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT	GGSISSSSY	GGTGGCTCCATCAGCAGTAGTAGTTAC	YWGWIRQPPGKGLEWIGSI	TACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATC	YYSGS	TATTATAGTGGGAGC	TYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYY	ACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTAC	CCSSGYYEPGYW	TGTTGTAGTAGTGGTTATTACGAACCGGGCTACTGG	GQGTLVTVSS	GGCCAGGGAACCCTGGTCACCGTCTCCTCAG	11,162	35	clonotype701	clonotype701_consensus_1	1	ALAW-AS044-3-BCR_outs_filtered_contig_annotations.csv	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
17	AAACCTGCAGTTAACC-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGCAGTTAACC-1_contig_1	true	541	TRA	TRAV17	null	TRAJ10	TRAC	true	true	SQQGEEDPQALSIQEGENATMNCSYK	AGTCAACAGGGAGAAGAGGATCCTCAGGCCTTGAGCATCCAGGAGGGTGAAAATGCCACCATGAACTGCAGTTACAAA	TSINN	ACTAGTATAAACAAT	LQWYRQNSGRGLVHLIL	TTACAGTGGTATAGACAAAATTCAGGTAGAGGCCTTGTCCACCTAATTTTA	IRSNERE	ATACGTTCAAATGAAAGAGAG	KHSGRLRVTLDTSKKSSSLLITASRAADTASYF	AAACACAGTGGAAGATTAAGAGTCACGCTTGACACTTCCAAGAAAAGCAGTTCCTTGTTGATCACGGCTTCCCGGGCAGCAGACACTGCTTCTTACTTC	CATDDALAGGGNKLTF	TGTGCTACGGACGACGCTCTAGCGGGAGGAGGAAACAAACTCACCTTT	GTGTQLKVEL	GGGACAGGCACTCAGCTAAAAGTGGAACTCA	5,294	6	clonotype7327	clonotype7327_consensus_2	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,conventional_cd8_t_cells
15	AAACCTGCAGTTTACG-1	G23	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCAGTTTACG-1_contig_1	true	489	TRB	TRBV27	null	TRBJ1-5	TRBC1	true	true	EAQVTQNPRYLITVTGKKLTVTCSQN	GAAGCCCAAGTGACCCAGAACCCAAGATACCTCATCACAGTGACTGGAAAGAAGTTAACAGTGACTTGTTCTCAGAAT	MNHEY	ATGAACCATGAGTAT	MSWYRQDPGLGLRQIYY	ATGTCCTGGTATCGACAAGACCCAGGGCTGGGCTTAAGGCAGATCTACTAT	SMNVEV	TCAATGAATGTTGAGGTG	TDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYF	ACTGATAAGGGAGATGTTCCTGAAGGGTACAAAGTCTCTCGAAAAGAGAAGAGGAATTTCCCCCTGATCCTGGAGTCGCCCAGCCCCAACCAGACCTCTCTGTACTTC	CASSLGVGQPQHF	TGTGCCAGCAGTTTAGGGGTGGGTCAGCCCCAGCATTTT	GDGTRLSIL	GGTGATGGGACTCGACTCTCCATCCTAG	14,682	7	clonotype1904	clonotype1904_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,conventional_cd8_t_cells
16	AAACCTGCATACTACG-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCATACTACG-1_contig_1	true	496	TRB	TRBV7-3	null	TRBJ1-2	TRBC1	true	true	GAGVSQTPSNKVTEKGKYVELRCDPI	GGTGCTGGAGTCTCCCAGACCCCCAGTAACAAGGTCACAGAGAAGGGAAAATATGTAGAGCTCAGGTGTGATCCAATT	SGHTA	TCAGGTCATACTGCC	LYWYRQSLGQGPEFLIY	CTTTACTGGTACCGACAAAGCCTGGGGCAGGGCCCAGAGTTTCTAATTTAC	FQGTGA	TTCCAAGGCACGGGTGCG	ADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYL	GCAGATGACTCAGGGCTGCCCAACGATCGGTTCTTTGCAGTCAGGCCTGAGGGATCCGTCTCTACTCTGAAGATCCAGCGCACAGAGCGGGGGGACTCAGCCGTGTATCTC	CASSQDRLRYTF	TGTGCCAGCAGCCAGGACAGGCTTAGGTACACCTTC	GSGTRLTVV	GGTTCGGGGACCAGGTTAACCGTTGTAG	29,608	16	clonotype2491	clonotype2491_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,b_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
10	AAACCTGCATCCTAGA-1	G15	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGCATCCTAGA-1_contig_1	true	491	TRB	TRBV24-1	null	TRBJ2-2	TRBC2	true	true	DADVTQTPRNRITKTGKRIMLECSQT	GATGCTGATGTTACCCAGACCCCAAGGAATAGGATCACAAAGACAGGAAAGAGGATTATGCTGGAATGTTCTCAGACT	KGHDR	AAGGGTCATGATAGA	MYWYRQDPGLGLRLIYY	ATGTACTGGTATCGACAAGACCCAGGACTGGGCCTACGGTTGATCTATTAC	SFDVKD	TCCTTTGATGTCAAAGAT	INKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYF	ATAAACAAAGGAGAGATCTCTGATGGATACAGTGTCTCTCGACAGGCACAGGCTAAATTCTCCCTGTCCCTAGAGTCTGCCATCCCCAACCAGACAGCTCTTTACTTC	CATSEPGQSNTGELFF	TGTGCCACCAGTGAACCCGGACAGTCGAACACCGGGGAGCTGTTTTTT	GEGSRLTVL	GGAGAAGGCTCTAGGCTGACCGTACTGG	16,262	16	clonotype6158	clonotype6158_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGCATCCTAGA-1	SeuratProject	4,495	1,940	1,935	20	2.780868	24.605117	12.134105	10.921841	1.475535	A15	A	Male	26	G15	AS044	ALAW-AS044-2	TRAV1-2- CD8+ T cells	1	x,y,gd_t_cells,conventional_cd8_t_cells
18	AAACCTGCATCTACGA-1	L07	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGCATCTACGA-1_contig_1	true	527	TRB	TRBV20-1	null	TRBJ1-5	TRBC1	true	true	GAVVSQHPSRVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCAGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKQSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAACAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSARNLEGGSNQPQHF	TGCAGTGCTAGAAACCTGGAGGGTGGTAGCAATCAGCCCCAGCATTTT	GDGTRLSIL	GGTGATGGGACTCGACTCTCCATCCTAG	17,034	23	clonotype4401	clonotype4401_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGCATCTACGA-1	SeuratProject	6,640	2,551	2,456	20	1.295181	26.340361	12.696968	11.316847	0.373153	E07	E	Male	80	L07	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells,conventional_cd8_t_cells
17	AAACCTGCATGATCCA-1	G20	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCATGATCCA-1_contig_1	true	465	TRA	TRAV9-2	null	TRAJ5	TRAC	true	true	GDSVTQMEGPVTLSEEAFLTINCTYT	GGAGATTCAGTGACCCAGATGGAAGGGCCAGTGACTCTCTCAGAAGAGGCCTTCCTGACTATAAACTGCACGTACACA	ATGYPS	GCCACAGGATACCCTTCC	LFWYVQYPGEGLQLLLK	CTTTTCTGGTATGTCCAATATCCTGGAGAAGGTCTACAGCTCCTCCTGAAA	ATKADDK	GCCACGAAGGCTGATGACAAG	GSNKGFEATYRKETTSFHLEKGSVQVSDSAVYF	GGAAGCAACAAAGGTTTTGAAGCCACATACCGTAAAGAAACCACTTCTTTCCACTTGGAGAAAGGCTCAGTTCAAGTGTCAGACTCAGCGGTGTACTTC	CALSDLGRRALTF	TGTGCTCTGAGTGATCTAGGCAGGAGAGCACTTACTTTT	GSGTRLQVQP	GGGAGTGGAACAAGACTCCAAGTGCAACCAA	9,762	5	clonotype1348	clonotype1348_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGCATGATCCA-1	SeuratProject	4,847	1,648	970	20	1.733031	40.148545	12.242876	10.686501	0.793297	A20	A	Male	27	G20	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells
18	AAACCTGCATTGAGCT-1	doublet	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGCATTGAGCT-1_contig_1	true	489	TRA	TRAV12-2	null	TRAJ8	TRAC	true	true	QKEVEQNSGPLSVPEGAIASLNCTYS	CAGAAGGAGGTGGAGCAGAATTCTGGACCCCTCAGTGTTCCAGAGGGAGCCATTGCCTCTCTCAACTGCACTTACAGT	DRGSQS	GACCGAGGTTCCCAGTCC	FFWYRQYSGKSPELIMS	TTCTTCTGGTACAGACAATATTCTGGGAAAAGCCCTGAGTTGATAATGTCC	IYSNGD	ATATACTCCAATGGTGAC	KEDGRFTAQLNKASQYVSLLIRDSQPSDSATYL	AAAGAAGATGGAAGGTTTACAGCACAGCTCAATAAAGCCAGCCAGTATGTTTCTCTGCTCATCAGAGACTCCCAGCCCAGTGATTCAGCCACCTACCTC	CAAAMNTGFQKLVF	TGTGCCGCTGCGATGAACACAGGCTTTCAGAAACTTGTATTT	GTGTRLLVSP	GGAACTGGCACCCGACTTCTGGTCAGTCCAA	1,876	4	clonotype66	clonotype66_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
19	AAACCTGGTACCGGCT-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	true	AAACCTGGTACCGGCT-1_contig_1	true	544	IGH	IGHV1-69D	null	IGHJ4	IGHM	true	true	QVQLVQSGAEVKKPGSSVKVSCKAS	CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT	GGTFSSY	GGAGGCACCTTCAGCAGCTAT	AISWVRQAPGQGLEWMGGI	GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATC	IPIFGT	ATCCCTATCTTTGGTACA	ANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYY	GCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTAC	CARARGWYTDFDYW	TGTGCGAGAGCACGTGGCTGGTACACAGACTTTGACTACTGG	GQGTLVTVSS	GGCCAGGGAACCCTGGTCACCGTCTCCTCAG	6,990	21	clonotype185	clonotype185_consensus_1	1	ALAW-AS044-3-BCR_outs_filtered_contig_annotations.csv	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells
null	AAACCTGGTAGGGTAC-1	null	null	true	AAACCTGGTAGGGTAC-1_contig_1	true	501	TRB	TRBV20-1	null	TRBJ1-4	TRBC1	true	true	GAVVSQHPSWVICKSGTSVKIECRSL	GGTGCTGTCGTCTCTCAACATCCGAGCTGGGTTATCTGTAAGAGTGGAACCTCTGTGAAGATCGAGTGCCGTTCCCTG	DFQATT	GACTTTCAGGCCACAACT	MFWYRQFPKQSLMLMAT	ATGTTTTGGTATCGTCAGTTCCCGAAACAGAGTCTCATGCTGATGGCAACT	SNEGSKA	TCCAATGAGGGCTCCAAGGCC	TYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYI	ACATACGAGCAAGGCGTCGAGAAGGACAAGTTTCTCATCAACCATGCAAGCCTGACCTTGTCCACTCTGACAGTGACCAGTGCCCATCCTGAAGACAGCAGCTTCTACATC	CSATPGQDTANIGRLFF	TGCAGTGCGACGCCGGGACAAGACACCGCGAACATCGGCCGACTGTTTTTT	GSGTQLSVL	GGCAGTGGAACCCAGCTCTCTGTCTTGG	6,566	5	clonotype303	clonotype303_consensus_1	2	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
11	AAACCTGGTAGTACCT-1	G15	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	true	AAACCTGGTAGTACCT-1_contig_1	true	657	IGH	IGHV3-21	null	IGHJ4	IGHA1	true	true	DVHLVESGGGSVKPGGSLRLSCVAS	GACGTGCATCTGGTGGAGTCTGGGGGAGGCTCGGTCAAGCCGGGGGGGTCCCTGAGACTCTCCTGTGTTGCCTCT	GIAFTSH	GGAATCGCCTTCACTTCCCAT	RMMWVRQAPGKGLEFVSSI	AGGATGATGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTTCGTCTCGTCTATC	SRGSDY	AGCCGTGGGAGTGATTAT	ISYSDSVKGRFTISRDNAKNSLHLLMNSLRAEDTGVYY	ATCTCCTACTCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTCCATTTGCTAATGAACAGCCTGAGAGCCGAGGACACGGGTGTCTATTAC	CARVRDGNLVAADYW	TGTGCGAGAGTCCGGGACGGCAATTTAGTAGCAGCCGACTACTGG	GQGTLVTVSS	GGCCAGGGAACCCTGGTCACCGTCTCCTCAG	8,958	22	clonotype253	clonotype253_consensus_1	1	ALAW-AS044-3-BCR_outs_filtered_contig_annotations.csv	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	x,y,gd_t_cells,cd4_t_helper_memory_cells,cd4_t_cells
12	AAACCTGGTATGCTTG-1	covid	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGGTATGCTTG-1_contig_1	true	496	TRB	TRBV7-2	null	TRBJ1-5	TRBC1	true	true	GAGVSQSPSNKVTEKGKDVELRCDPI	GGAGCTGGAGTCTCCCAGTCCCCCAGTAACAAGGTCACAGAGAAGGGAAAGGATGTAGAGCTCAGGTGTGATCCAATT	SGHTA	TCAGGTCATACTGCC	LYWYRQSLGQGLEFLIY	CTTTACTGGTACCGACAGAGCCTGGGGCAGGGCCTGGAGTTTTTAATTTAC	FQGNSA	TTCCAAGGCAACAGTGCA	PDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYL	CCAGACAAATCAGGGCTGCCCAGTGATCGCTTCTCTGCAGAGAGGACTGGGGGATCCGTCTCCACTCTGACGATCCAGCGCACACAGCAGGAGGACTCGGCCGTGTATCTC	CASSLRGDQPQHF	TGTGCCAGCAGCTTAAGAGGGGATCAGCCCCAGCATTTT	GDGTRLSIL	GGTGATGGGACTCGACTCTCCATCCTAG	27,374	26	clonotype4153	clonotype4153_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,nk_cells
19	AAACCTGGTATGGTTC-1	G23	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells,nk_cells,conventional_cd8_t_cells
13	AAACCTGGTCAACATC-1	covid	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,b_cells,cd4_t_cells
20	AAACCTGGTCAGAATA-1	L07	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,conventional_cd8_t_cells
21	AAACCTGGTCCAGTAT-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTCCAGTAT-1_contig_1	true	499	TRB	TRBV9	null	TRBJ1-2	TRBC1	true	true	DSGVTQTPKHLITATGQRVTLRCSPR	GATTCTGGAGTCACACAAACCCCAAAGCACCTGATCACAGCAACTGGACAGCGAGTGACGCTGAGATGCTCCCCTAGG	SGDLS	TCTGGAGACCTCTCT	VYWYQQSLDQGLQFLIH	GTGTACTGGTACCAACAGAGCCTGGACCAGGGCCTCCAGTTCCTCATTCAC	YYNGEE	TATTATAATGGAGAAGAG	RAKGNILERFSAQQFPDLHSELNLSSLELGDSALYF	AGAGCAAAAGGAAACATTCTTGAACGATTCTCCGCACAACAGTTCCCTGACTTGCACTCTGAACTAAACCTGAGCTCTCTGGAGCTGGGGGACTCAGCTTTGTATTTC	CASSGNTEGRFGYTF	TGTGCCAGCAGCGGAAATACAGAAGGTCGGTTCGGCTACACCTTC	GSGTRLTVV	GGTTCGGGGACCAGGTTAACCGTTGTAG	17,782	11	clonotype4900	clonotype4900_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
22	AAACCTGGTCCCGACA-1	L13	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGGTCCCGACA-1	SeuratProject	4,691	2,050	2,038	20	4.583245	16.457045	12.19568	11.001408	2.196369	E13	E	Male	79	L13	AS044	ALAW-AS044-3	NK cells	5	y,b_cells,myeloid_cells,nk_cells,conventional_cd8_t_cells
23	AAACCTGGTCCGACGT-1	doublet	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTCCGACGT-1_contig_1	true	529	TRB	TRBV2	null	TRBJ2-7	TRBC2	true	true	EPEVTQTPSHQVTQMGQEVILRCVPI	GAACCTGAAGTCACCCAGACTCCCAGCCATCAGGTCACACAGATGGGACAGGAAGTGATCTTGCGCTGTGTCCCCATC	SNHLY	TCTAATCACTTATAC	FYWYRQILGQKVEFLVS	TTCTATTGGTACAGACAAATCTTGGGGCAGAAAGTCGAGTTTCTGGTTTCC	FYNNEI	TTTTATAATAATGAAATC	SEKSEIFDDQFSVERPDGSNFTLKIRSTKLEDSAMYF	TCAGAGAAGTCTGAAATATTCGATGATCAATTCTCAGTTGAAAGGCCTGATGGATCAAATTTCACTCTGAAGATCCGGTCCACAAAGCTGGAGGACTCAGCCATGTACTTC	CASSSDSPFSYEQYF	TGTGCCAGCAGTTCGGACAGCCCGTTTTCCTACGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	5,188	3	clonotype6913	clonotype6913_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,myeloid_cells
24	AAACCTGGTCGAGTTT-1	covid	ALAW-AS044-3_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
25	AAACCTGGTCGTGGCT-1	G23	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTCGTGGCT-1_contig_1	true	484	TRB	TRBV5-1	null	TRBJ2-7	TRBC2	true	true	KAGVTQTPRYLIKTRGQQVTLSCSPI	AAGGCTGGAGTCACTCAAACTCCAAGATATCTGATCAAAACGAGAGGACAGCAAGTGACACTGAGCTGCTCCCCTATC	SGHRS	TCTGGGCATAGGAGT	VSWYQQTPGQGLQFLFE	GTATCCTGGTACCAACAGACCCCAGGACAGGGCCTTCAGTTCCTCTTTGAA	YFSETQ	TACTTCAGTGAGACACAG	RNKGNFPGRFSGRQFSNSRSEMNVSTLELGDSALYL	AGAAACAAAGGAAACTTCCCTGGTCGATTCTCAGGGCGCCAGTTCTCTAACTCTCGCTCTGAGATGAATGTGAGCACCTTGGAGCTGGGGGACTCGGCCCTTTATCTT	CASSLQIAGVRGEQYF	TGCGCCAGCAGCTTACAAATAGCGGGAGTGCGCGGCGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	24,730	15	clonotype7285	clonotype7285_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGGTCGTGGCT-1	SeuratProject	4,941	1,632	999	20	1.477434	42.339607	12.270587	10.672425	0.563093	A23	A	Male	27	G23	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_cells
26	AAACCTGGTCTAGGTT-1	L15	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTCTAGGTT-1_contig_1	true	508	TRA	TRAV23/DV6	null	TRAJ39	TRAC	true	true	QQQVKQSPQSLIVQKGGISIINCAYE	CAGCAGCAGGTGAAACAAAGTCCTCAATCTTTGATAGTCCAGAAAGGAGGGATTTCAATTATAAACTGTGCTTATGAG	NTAFDY	AACACTGCGTTTGACTAC	FPWYQQFPGKGPALLIA	TTTCCATGGTACCAACAATTCCCTGGGAAAGGCCCTGCATTATTGATAGCC	IRPDVSE	ATACGTCCAGATGTGAGTGAA	KKEGRFTISFNKSAKQFSLHIMDSQPGDSATYF	AAGAAAGAAGGAAGATTCACAATCTCCTTCAATAAAAGTGCCAAGCAGTTCTCATTGCATATCATGGATTCCCAGCCTGGAGACTCAGCCACCTACTTC	CAASHNAGNMLTF	TGTGCAGCAAGCCATAATGCAGGCAACATGCTCACCTTT	GGGTRLMVKP	GGAGGGGGAACAAGGTTAATGGTCAAACCCC	2,458	3	clonotype4530	clonotype4530_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGGTCTAGGTT-1	SeuratProject	4,902	1,720	1,395	20	1.733986	39.94288	12.259155	10.748193	0.794092	E15	E	Male	78	L15	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_cells,myeloid_cells
27	AAACCTGGTCTCTCGT-1	G15	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTCTCTCGT-1_contig_1	true	481	TRB	TRBV28	null	TRBJ2-1	TRBC2	true	true	DVKVTQSSRYLVKRTGEKVFLECVQD	GATGTGAAAGTAACCCAGAGCTCGAGATATCTAGTCAAAAGGACGGGAGAGAAAGTTTTTCTGGAATGTGTCCAGGAT	MDHEN	ATGGACCATGAAAAT	MFWYRQDPGLGLRLIYF	ATGTTCTGGTATCGACAAGACCCAGGTCTGGGGCTACGGCTGATCTATTTC	SYDVKM	TCATATGATGTTAAAATG	KEKGDIPEGYSVSREKKERFSLILESASTNQTSMYL	AAAGAAAAAGGAGATATTCCTGAGGGGTACAGTGTCTCTAGAGAGAAGAAGGAGCGCTTCTCCCTGATTCTGGAGTCCGCCAGCACCAACCAGACATCTATGTACCTC	CASSFTPFTGSSYNEQFF	TGTGCCAGCAGTTTCACCCCCTTTACAGGGAGCTCCTACAATGAGCAGTTCTTC	GPGTRLTVL	GGGCCAGGGACACGGCTCACCGTGCTAG	23,510	11	clonotype8574	clonotype8574_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGGTCTCTCGT-1	SeuratProject	4,362	1,714	707	20	1.811096	34.502522	12.090774	10.743151	0.856863	A15	A	Male	26	G15	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,b_cells,cd4_t_cells,myeloid_cells
28	AAACCTGGTGACGCCT-1	G15	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGGTGACGCCT-1_contig_1	true	500	TRB	TRBV2	null	TRBJ2-3	TRBC2	true	true	EPEVTQTPSHQVTQMGQEVILRCVPI	GAACCTGAAGTCACCCAGACTCCCAGCCATCAGGTCACACAGATGGGACAGGAAGTGATCTTGCGCTGTGTCCCCATC	SNHLY	TCTAATCACTTATAC	FYWYRQILGQKVEFLVS	TTCTATTGGTACAGACAAATCTTGGGGCAGAAAGTCGAGTTTCTGGTTTCC	FYNNEI	TTTTATAATAATGAAATC	SEKSEIFDDQFSVERPDGSNFTLKIRSTKLEDSAMYF	TCAGAGAAGTCTGAAATATTCGATGATCAATTCTCAGTTGAAAGGCCTGATGGATCAAATTTCACTCTGAAGATCCGGTCCACAAAGCTGGAGGACTCAGCCATGTACTTC	CASSVVASLTDTQYF	TGTGCCAGCAGTGTTGTAGCCTCCCTCACAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	10,552	7	clonotype6764	clonotype6764_consensus_1	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGGTGACGCCT-1	SeuratProject	4,053	1,736	1,732	20	3.207501	31.38416	11.984774	10.761551	1.68145	A15	A	Male	26	G15	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells
14	AAACCTGGTGAGGGTT-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGGTGAGGGTT-1_contig_1	true	672	TRB	TRBV5-6	null	TRBJ1-1	TRBC1	true	true	DAGVTQSPTHLIKTRGQQVTLRCSPK	GACGCTGGAGTCACCCAAAGTCCCACACACCTGATCAAAACGAGAGGACAGCAAGTGACTCTGAGATGCTCTCCTAAG	SGHDT	TCTGGGCATGACACT	VSWYQQALGQGPQFIFQ	GTGTCCTGGTACCAACAGGCCCTGGGTCAGGGGCCCCAGTTTATCTTTCAG	YYEEEE	TATTATGAGGAGGAAGAG	RQRGNFPDRFSGHQFPNYSSELNVNALLLGDSALYL	AGACAGAGAGGCAACTTCCCTGATCGATTCTCAGGTCACCAGTTCCCTAACTATAGCTCTGAGCTGAATGTGAACGCCTTGTTGCTGGGGGACTCGGCCCTCTATCTC	CASSRGVNTEAFF	TGTGCCAGCAGCAGAGGGGTGAACACTGAAGCTTTCTTT	GQGTRLTVV	GGACAAGGCACCAGACTCACAGTTGTAG	3,382	3	clonotype2405	clonotype2405_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGGTGAGGGTT-1	SeuratProject	3,737	1,451	2,107	20	0.93658	40.433503	11.867665	10.502832	-0.094526	A23	A	Male	27	G23	AS044	ALAW-AS044-2	CD4+ T cells	0	y,b_cells,cd4_t_cells
15	AAACCTGGTGCATCTA-1	G20	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGGTGCATCTA-1_contig_1	true	660	TRB	TRBV19	TRBD2	TRBJ2-7	TRBC2	true	true	DGGITQSPKYLFRKEGQNVTLSCEQN	GATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCTGAGTTGTGAACAGAAT	LNHDA	TTGAACCACGATGCC	MYWYRQDPGQGLRLIYY	ATGTACTGGTACCGACAGGACCCAGGGCAAGGGCTGAGATTGATCTACTAC	SQIVND	TCACAGATAGTAAATGAC	FQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYL	TTTCAGAAAGGAGATATAGCTGAAGGGTACAGCGTCTCTCGGGAGAAGAAGGAATCCTTTCCTCTCACTGTGACATCGGCCCAAAAGAACCCGACAGCTTTCTATCTC	CASMGTSGRSSEQYF	TGTGCCAGTATGGGGACTAGCGGGAGGTCCAGCGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	3,682	6	clonotype4837	clonotype4837_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGGTGCATCTA-1	SeuratProject	4,902	1,984	1,218	20	3.345573	29.110567	12.259155	10.954196	1.742253	A20	A	Male	27	G20	AS044	ALAW-AS044-2	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells
21	AAACCTGGTGCCTGCA-1	G23	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGGTGCCTGCA-1_contig_1	true	654	TRB	TRBV19	null	TRBJ2-7	TRBC2	true	true	DGGITQSPKYLFRKEGQNVTLSCEQN	GATGGTGGAATCACTCAGTCCCCGAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCTGAGTTGTGAACAGAAT	LNHDA	TTGAACCACGATGCC	MYWYRQDPGQGLRLIYY	ATGTACTGGTACCGACAGGACCCAGGGCAAGGGCTGAGATTGATCTACTAC	SQIVND	TCACAGATAGTAAATGAC	FQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYL	TTTCAGAAAGGAGATATAGCTGAAGGGTACAGCGTCTCTCGGGAGAAGAAGGAATCCTTTCCTCTCACTGTGACATCGGCCCAAAAGAACCCGACAGCTTTCTATCTC	CASSIGSHYEQYF	TGTGCCAGTAGTATTGGGTCCCACTACGAGCAGTACTTC	GPGTRLTVT	GGGCCGGGCACCAGGCTCACGGTCACAG	9,622	13	clonotype1798	clonotype1798_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGGTGCCTGCA-1	SeuratProject	2,849	1,349	2,075	20	0.666901	32.327132	11.47624	10.397675	-0.584456	A23	A	Male	27	G23	AS044	ALAW-AS044-1	TRAV1-2- CD8+ T cells	1	y,cd4_t_cells,conventional_cd8_t_cells
22	AAACCTGGTGCTGTAT-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGGTGCTGTAT-1_contig_1	true	512	TRB	TRBV6-1	TRBD1	TRBJ2-3	TRBC2	true	true	NAGVTQTPKFQVLKTGQSMTLQCAQD	AATGCTGGTGTCACTCAGACCCCAAAATTCCAGGTCCTGAAGACAGGACAGAGCATGACACTGCAGTGTGCCCAGGAT	MNHNS	ATGAACCATAACTCC	MYWYRQDPGMGLRLIYY	ATGTACTGGTATCGACAAGACCCAGGCATGGGACTGAGGCTGATTTATTAC	SASEGT	TCAGCTTCTGAGGGTACC	TDKGEVPNGYNVSRLNKREFSLRLESAAPSQTSVYF	ACTGACAAAGGAGAAGTCCCCAATGGCTACAATGTCTCCAGATTAAACAAACGGGAGTTCTCGCTCAGGCTGGAGTCGGCTGCTCCCTCCCAGACATCTGTGTACTTC	CASSEDKGQGKDTQYF	TGTGCCAGCAGTGAAGATAAGGGACAGGGGAAAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	6,704	7	clonotype6564	clonotype6564_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells
16	AAACCTGGTGGTCTCG-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGGTGGTCTCG-1_contig_1	true	479	TRA	TRAV38-1	null	TRAJ52	TRAC	true	true	AQTVTQSQPEMSVQEAETVTLSCTYD	GCCCAGACAGTCACTCAGTCTCAACCAGAGATGTCTGTGCAGGAGGCAGAGACTGTGACCCTGAGTTGCACATATGAC	TSENNYY	ACCAGTGAGAATAATTATTAT	LFWYKQPPSRQMILVIR	TTGTTCTGGTACAAGCAGCCTCCCAGCAGGCAGATGATTCTCGTTATTCGC	QEAYKQQN	CAAGAAGCTTATAAGCAACAGAAT	ATENRFSVNFQKAAKSFSLKISDSQLGDTAMYF	GCAACGGAGAATCGTTTCTCTGTGAACTTCCAGAAAGCAGCCAAATCCTTCAGTCTCAAGATCTCAGACTCACAGCTGGGGGACACTGCGATGTATTTC	CPTGAGGTSYGKLTF	TGCCCAACGGGTGCTGGTGGTACTAGCTACGGAAAGCTGACATTT	GQGTILTVHP	GGACAAGGGACCATCTTGACTGTCCATCCAA	208	1	clonotype4001	clonotype4001_consensus_2	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGGTGGTCTCG-1	SeuratProject	3,795	1,753	2,355	20	1.844532	23.003953	11.889884	10.77561	0.883255	A23	A	Male	27	G23	AS044	ALAW-AS044-2	TRAV1-2- CD8+ T cells	1	x,y,gd_t_cells,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
17	AAACCTGGTGTGCGTC-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGGTGTGCGTC-1	SeuratProject	3,015	1,345	968	20	4.046434	30.845771	11.557942	10.39339	2.016651	A23	A	Male	27	G23	AS044	ALAW-AS044-2	NK cells	5	y,nk_cells
23	AAACCTGGTTACGACT-1	doublet	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGGTTACGACT-1_contig_1	true	516	TRB	TRBV12-5	null	TRBJ2-3	TRBC2	true	true	DARVTQTPRDKVTEMGQEVTMRCQPI	GATGCTAGAGTCACCCAGACACCAAGGGACAAGGTGACAGAGATGGGACAAGAAGTAACAATGAGATGTCAGCCAATT	LGHNT	TTAGGCCACAATACT	VFWYRQTMKQGLELLAY	GTTTTCTGGTACAGACAGACCATGAAGCAAGGACTGGAGTTGCTGGCTTAC	FRNRAP	TTCCGCAACCGGGCTCCT	LDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYF	CTAGATGATTCGGGGATGCCGAAGGATCGATTCTCAGCAGAGATGCCTGATGCAACTTTAGCCACTCTGAAGATCCAGCCCTCAGAACCCAGGGACTCAGCTGTGTATTTT	CASGPSASTDTQYF	TGTGCTAGTGGTCCAAGTGCTAGCACAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	8,466	8	clonotype4987	clonotype4987_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,b_cells,cd4_t_cells
18	AAACCTGGTTACGTCA-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
24	AAACCTGGTTCTGAAC-1	L13	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGGTTCTGAAC-1_contig_1	true	478	TRA	TRAV10	null	TRAJ39	TRAC	true	true	KNQVEQSPQSLIILEGKNCTLQCNYT	AAAAACCAAGTGGAGCAGAGTCCTCAGTCCCTGATCATCCTGGAGGGAAAGAACTGCACTCTTCAATGCAATTATACA	VSPFSN	GTGAGCCCCTTCAGCAAC	LRWYKQDTGRGPVSLTI	TTAAGGTGGTATAAGCAAGATACTGGGAGAGGTCCTGTTTCCCTGACAATC	MTFSENT	ATGACTTTCAGTGAGAACACA	KSNGRYTATLDADTKQSSLHITASQLSDSASYI	AAGTCGAACGGAAGATATACAGCAACTCTGGATGCAGACACAAAGCAAAGCTCTCTGCACATCACAGCCTCCCAGCTCAGCGATTCAGCCTCCTACATC	CAGGGAAGNMLTF	TGTGCGGGGGGGGGGGCTGCAGGCAACATGCTCACCTTT	GGGTRLMVKP	GGAGGGGGAACAAGGTTAATGGTCAAACCCC	764	1	clonotype8532	clonotype8532_consensus_2	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGGTTCTGAAC-1	SeuratProject	5,792	1,901	1,109	20	1.640193	37.03384	12.499846	10.892543	0.713866	E13	E	Male	79	L13	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
19	AAACCTGTCAAACGGG-1	covid	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,nk_cells
29	AAACCTGTCAACTCTT-1	L13	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGTCAACTCTT-1_contig_1	true	618	TRA	TRAV3	null	TRAJ26	TRAC	true	true	AQSVAQPEDQVNVAEGNPLTVKCTYS	GCTCAGTCAGTGGCTCAGCCGGAAGATCAGGTCAACGTTGCTGAAGGGAATCCTCTGACTGTGAAATGCACCTATTCA	VSGNPY	GTCTCTGGAAACCCTTAT	LFWYVQYPNRGLQFLLK	CTTTTTTGGTATGTTCAATACCCCAACCGAGGCCTCCAGTTCCTTCTGAAA	YITGDNLV	TACATCACAGGGGATAACCTGGTT	KGSYGFEAEFNKSQTSFHLKKPSALVSDSALYF	AAAGGCAGCTATGGCTTTGAAGCTGAATTTAACAAGAGCCAAACCTCCTTCCACCTGAAGAAACCATCTGCCCTTGTGAGCGACTCCGCTTTGTACTTC	CAVRDKGYGQNFVF	TGTGCTGTGAGAGACAAGGGATATGGTCAGAATTTTGTCTTT	GPGTRLSVLP	GGTCCCGGAACCAGATTGTCCGTGCTGCCCT	4,990	3	clonotype1	clonotype1_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGTCAACTCTT-1	SeuratProject	4,697	1,942	2,212	20	4.61997	20.140515	12.197524	10.923327	2.207884	E13	E	Male	79	L13	AS044	ALAW-AS044-3	TRAV1-2- CD8+ T cells	1	y,cd4_t_cells,conventional_cd8_t_cells
30	AAACCTGTCAAGGTAA-1	G23	ALAW-AS044-3_assignment_cell_patient.csv	true	AAACCTGTCAAGGTAA-1_contig_1	true	588	TRA	TRAV41	null	TRAJ49	TRAC	true	true	KNEVEQSPQNLTAQEGEFITINCSYS	AAAAATGAAGTGGAGCAGAGTCCTCAGAACCTGACTGCCCAGGAAGGAGAATTTATCACAATCAACTGCAGTTACTCG	VGISA	GTAGGAATAAGTGCC	LHWLQQHPGGGIVSLFM	TTACACTGGCTGCAACAGCATCCAGGAGGAGGCATTGTTTCCTTGTTTATG	LSSGK	CTGAGCTCAGGGAAG	KKHGRLIATINIQEKHSSLHITASHPRDSAVYI	AAGAAGCATGGAAGATTAATTGCCACAATAAACATACAGGAAAAGCACAGCTCCCTGCACATCACAGCCTCCCATCCCAGAGACTCTGCCGTCTACATC	CAVRRSGNQFYF	TGTGCTGTCAGACGTTCCGGTAACCAGTTCTATTTT	GTGTSLTVIP	GGGACAGGGACAAGTTTGACGGTCATTCCAA	5,786	3	clonotype2159	clonotype2159_consensus_2	1	ALAW-AS044-3-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-3_AAACCTGTCAAGGTAA-1	SeuratProject	5,789	1,965	1,761	20	1.451028	36.673001	12.499098	10.940314	0.537075	A23	A	Male	27	G23	AS044	ALAW-AS044-3	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells
20	AAACCTGTCACATAGC-1	L07	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGTCACATAGC-1_contig_1	true	535	TRB	TRBV5-8	TRBD1	TRBJ1-2	TRBC1	true	true	EAGVTQSPTHLIKTRGQQATLRCSPI	GAGGCTGGAGTCACACAAAGTCCCACACACCTGATCAAAACGAGAGGACAGCAAGCGACTCTGAGATGCTCTCCTATC	SGHTS	TCTGGGCACACCAGT	VYWYQQALGLGLQFLLW	GTGTACTGGTACCAACAGGCCCTGGGTCTGGGCCTCCAGTTCCTCCTTTGG	YDEGEE	TATGACGAGGGTGAAGAG	RNRGNFPPRFSGRQFPNYSSELNVNALELEDSALYL	AGAAACAGAGGAAACTTCCCTCCTAGATTTTCAGGTCGCCAGTTCCCTAATTATAGCTCTGAGCTGAATGTGAACGCCTTGGAGCTGGAGGACTCGGCCCTGTATCTC	CASSPRTGGSGYTF	TGTGCCAGCAGCCCTAGGACAGGGGGAAGTGGCTACACCTTC	GSGTRLTVV	GGTTCGGGGACCAGGTTAACCGTTGTAG	3,682	4	clonotype3558	clonotype3558_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
25	AAACCTGTCACTCTTA-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
26	AAACCTGTCCAACCAA-1	G20	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGTCCAACCAA-1	SeuratProject	3,515	1,373	2,079	20	1.394026	36.785206	11.779309	10.423116	0.479257	A20	A	Male	27	G20	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,conventional_cd8_t_cells
21	AAACCTGTCCCGACTT-1	G15	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
27	AAACCTGTCCCTTGTG-1	L15	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGTCCCTTGTG-1_contig_1	true	477	TRB	TRBV29-1	null	TRBJ2-6	TRBC2	true	true	SAVISQKPSRDICQRGTSLTIQCQVD	AGTGCTGTCATCTCTCAAAAGCCAAGCAGGGATATCTGTCAACGTGGAACCTCCCTGACGATCCAGTGTCAAGTCGAT	SQVTM	AGCCAAGTCACCATG	MFWYRQQPGQSLTLIAT	ATGTTCTGGTACCGTCAGCAACCTGGACAGAGCCTGACACTGATCGCAACT	ANQGSEA	GCAAATCAGGGCTCTGAGGCC	TYESGFVIDKFPISRPNLTFSTLTVSNMSPEDSSIYL	ACATATGAGAGTGGATTTGTCATTGACAAGTTTCCCATCAGCCGCCCAAACCTAACATTCTCAACTCTGACTGTGAGCAACATGAGCCCTGAAGACAGCAGCATATATCTC	CSVEDQRSGANVLTF	TGCAGCGTTGAAGACCAACGCTCTGGGGCCAACGTCCTGACTTTC	GAGSRLTVL	GGGGCCGGCAGCAGGCTGACCGTGCTGG	7,458	10	clonotype1842	clonotype1842_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-1_AAACCTGTCCCTTGTG-1	SeuratProject	4,470	1,732	1,117	20	2.080537	32.751678	12.126059	10.758223	1.056956	E15	E	Male	78	L15	AS044	ALAW-AS044-1	CD4+ T cells	0	y,cd4_t_cells,conventional_cd8_t_cells
22	AAACCTGTCCGAGCCA-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGTCCGAGCCA-1_contig_1	true	494	TRB	TRBV7-2	TRBD1	TRBJ2-5	TRBC2	true	true	GAGVSQSPSNKVTEKGKDVELRCDPI	GGAGCTGGAGTCTCCCAGTCCCCCAGTAACAAGGTCACAGAGAAGGGAAAGGATGTAGAGCTCAGGTGTGATCCAATT	SGHTA	TCAGGTCATACTGCC	LYWYRQSLGQGLEFLIY	CTTTACTGGTACCGACAGAGCCTGGGGCAGGGCCTGGAGTTTTTAATTTAC	FQGNSA	TTCCAAGGCAACAGTGCA	PDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYL	CCAGACAAATCAGGGCTGCCCAGTGATCGCTTCTCTGCAGAGAGGACTGGGGGATCCGTCTCCACTCTGACGATCCAGCGCACACAGCAGGAGGACTCGGCCGTGTATCTC	CASSLRDRGRETQYF	TGTGCCAGCAGCCTCCGGGACAGGGGTCGGGAGACCCAGTACTTC	GPGTRLLVL	GGGCCAGGCACGCGGCTCCTGGTGCTCG	25,208	22	clonotype5858	clonotype5858_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGTCCGAGCCA-1	SeuratProject	4,845	1,780	1,716	20	1.960784	37.110423	12.242281	10.797662	0.971431	A23	A	Male	27	G23	AS044	ALAW-AS044-2	CD4+ T cells	0	y,cd4_t_helper_memory_cells,cd4_t_cells,myeloid_cells
23	AAACCTGTCCGCAAGC-1	doublet	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGTCCGCAAGC-1_contig_1	true	629	TRB	TRBV19	null	TRBJ2-2	TRBC2	true	true	DGGITQSPKYLFRKEGQNVTLSCEQN	GATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCTGAGTTGTGAACAGAAT	LNHDA	TTGAACCACGATGCC	MYWYRQDPGQGLRLIYY	ATGTACTGGTACCGACAGGACCCAGGGCAAGGGCTGAGATTGATCTACTAC	SQIVND	TCACAGATAGTAAATGAC	FQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYL	TTTCAGAAAGGAGATATAGCTGAAGGGTACAGCGTCTCTCGGGAGAAGAAGGAATCCTTTCCTCTCACTGTGACATCGGCCCAAAAGAACCCGACAGCTTTCTATCTC	CASSAVGTGELFF	TGTGCCAGTAGCGCCGTTGGCACCGGGGAGCTGTTTTTT	GEGSRLTVL	GGAGAAGGCTCTAGGCTGACCGTACTGG	7,992	12	clonotype108	clonotype108_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_helper_memory_cells,cd4_t_cells
28	AAACCTGTCCGTAGTA-1	covid	ALAW-AS044-1_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	x,y,gd_t_cells,cd4_t_helper_memory_cells,cd4_t_cells
24	AAACCTGTCCTCATTA-1	L07	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGTCCTCATTA-1	SeuratProject	5,181	2,497	1,047	20	2.663578	13.510905	12.339015	11.28598	1.413366	E07	E	Male	80	L07	AS044	ALAW-AS044-2	NK cells	5	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
25	AAACCTGTCCTTGACC-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGTCCTTGACC-1	SeuratProject	4,063	1,974	1,121	20	2.584297	14.595127	11.98833	10.946906	1.369772	A23	A	Male	27	G23	AS044	ALAW-AS044-2	NK cells	5	y,cd4_t_helper_memory_cells,cd4_t_cells,nk_cells,conventional_cd8_t_cells
29	AAACCTGTCCTTTCTC-1	G15	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGTCCTTTCTC-1_contig_1	true	524	TRB	TRBV6-5	TRBD2	TRBJ2-3	TRBC2	true	true	NAGVTQTPKFQVLKTGQSMTLQCAQD	AATGCTGGTGTCACTCAGACCCCAAAATTCCAGGTCCTGAAGACAGGACAGAGCATGACACTGCAGTGTGCCCAGGAT	MNHEY	ATGAACCATGAATAC	MSWYRQDPGMGLRLIHY	ATGTCCTGGTATCGACAAGACCCAGGCATGGGGCTGAGGCTGATTCATTAC	SVGAGI	TCAGTTGGTGCTGGTATC	TDQGEVPNGYNVSRSTTEDFPLRLLSAAPSQTSVYF	ACTGACCAAGGAGAAGTCCCCAATGGCTACAATGTCTCCAGATCAACCACAGAGGATTTCCCGCTCAGGCTGCTGTCGGCTGCTCCCTCCCAGACATCTGTGTACTTC	CASSYGLAGVRTDTQYF	TGTGCCAGCAGTTACGGACTAGCGGGAGTACGGACAGATACGCAGTATTTT	GPGTRLTVL	GGCCCAGGCACCCGGCTGACAGTGCTCG	4,524	6	clonotype7874	clonotype7874_consensus_1	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells,conventional_cd8_t_cells
26	AAACCTGTCGCAAGCC-1	G23	ALAW-AS044-2_assignment_cell_patient.csv	true	AAACCTGTCGCAAGCC-1_contig_1	true	514	TRB	TRBV11-1	null	TRBJ2-5	TRBC2	true	true	EAEVAQSPRYKITEKSQAVAFWCDPI	GAAGCTGAAGTTGCCCAGTCCCCCAGATATAAGATTACAGAGAAAAGCCAGGCTGTGGCTTTTTGGTGTGATCCTATT	SGHAT	TCTGGCCATGCTACC	LYWYRQILGQGPELLVQ	CTTTACTGGTACCGGCAGATCCTGGGACAGGGCCCGGAGCTTCTGGTTCAA	FQDESV	TTTCAGGATGAGAGTGTA	VDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAMYL	GTAGATGATTCACAGTTGCCTAAGGATCGATTTTCTGCAGAGAGGCTCAAAGGAGTAGACTCCACTCTCAAGATCCAGCCTGCAGAGCTTGGGGACTCGGCCATGTATCTC	CASSPGVEGIETQYF	TGTGCCAGCAGCCCCGGGGTCGAGGGGATAGAGACCCAGTACTTC	GPGTRLLVL	GGGCCAGGCACGCGGCTCCTGGTGCTCG	1,858	4	clonotype6353	clonotype6353_consensus_1	1	ALAW-AS044-2-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	ALAW-AS044-2_AAACCTGTCGCAAGCC-1	SeuratProject	5,940	2,331	6,338	20	0.959596	28.013468	12.536247	11.186733	-0.059501	A23	A	Male	27	G23	AS044	ALAW-AS044-2	TRAV1-2- CD8+ T cells	1	y,conventional_cd8_t_cells
30	AAACCTGTCGCGTTTC-1	G23	ALAW-AS044-1_assignment_cell_patient.csv	true	AAACCTGTCGCGTTTC-1_contig_1	true	511	TRA	TRAV17	null	TRAJ52	TRAC	true	true	SQQGEEDPQALSIQEGENATMNCSYK	AGTCAACAGGGAGAAGAGGATCCTCAGGCCTTGAGCATCCAGGAGGGTGAAAATGCCACCATGAACTGCAGTTACAAA	TSINN	ACTAGTATAAACAAT	LQWYRQNSGRGLVHLIL	TTACAGTGGTATAGACAAAATTCAGGTAGAGGCCTTGTCCACCTAATTTTA	IRSNERE	ATACGTTCAAATGAAAGAGAG	KHSGRLRVTLDTSKKSSSLLITASRAADTASYF	AAACACAGTGGAAGATTAAGAGTCACGCTTGACACTTCCAAGAAAAGCAGTTCCTTGTTGATCACGGCTTCCCGGGCAGCAGACACTGCTTCTTACTTC	CATGGTSYGKLTF	TGTGCTACGGGGGGTACTAGCTACGGAAAGCTGACATTT	GQGTILTVHP	GGACAAGGGACCATCTTGACTGTCCATCCAA	4,442	5	clonotype6880	clonotype6880_consensus_2	1	ALAW-AS044-1-TCR_outs_filtered_contig_annotations.csv	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	AS044	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	null	y,cd4_t_cells,myeloid_cells,nk_cells

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sc-human-blood-aging-atlas

Study Description

This dataset accompanies the study “Single-cell atlas of healthy human blood unveils age-related loss of NKG2C+GZMB− CD8+ memory T cells and accumulation of type 2 memory CD4+/CD8+ T cells”, which provides a comprehensive single-cell transcriptomic and proteomic landscape of peripheral blood from healthy individuals across the adult lifespan.

Using single-cell RNA sequencing (scRNA-seq) integrated with TCR/BCR profiling and protein feature barcoding (20 antibodies), the study profiled 317 peripheral blood mononuclear cell (PBMC) samples from 166 individuals aged 25–85 years. The resulting dataset contains ~2 million immune cells, annotated into 50+ immune cell subpopulations.

Key findings include:

Decline with age of a novel subset of NKG2C⁺GZMB⁻ CD8⁺ central memory T cells
Accumulation with age of GZMK⁺ CD8⁺ effector memory T cells and HLA-DR⁺ CD4⁺ memory T cells
Increased IL-4 potential in CD4⁺ and CD8⁺ Type 2 memory T cells, indicating a shift toward a type 2 immune phenotype with age
Clonality analysis across T and B cell subsets reveals age-related changes in repertoire

This dataset serves as a rich resource for exploring age-associated immune remodeling and supports downstream machine learning and computational modeling efforts in aging, immunology, and single-cell systems biology.

Dataset Overview

This dataset contains multi-modal single-cell measurements from peripheral blood mononuclear cells (PBMCs) collected from 166 healthy individuals aged 25–85, spanning a 3-year period.

Attribute	Description
Individuals	166 healthy donors
Samples	317 PBMC samples (some donors sampled longitudinally)
Cells	~2 million high-quality single cells
Modalities	scRNA-seq, TCR-seq, BCR-seq, 20-plex protein barcoding
Format	`.parquet` (processed tables); `.h5ad` (raw gene counts & annotations)
Organism	Homo sapiens (human)
Tissues	Peripheral blood
Age Range	25 to 85 years old

Cell Type Annotations

The dataset includes high-confidence cell type annotations for ~2 million PBMCs, derived through integrated analysis of gene expression, surface protein markers, and immune receptor (TCR/BCR) features.

Key Details:

Total subpopulations: Over 50 distinct immune cell types
Annotation method:
- Canonical marker genes + antibody-derived tags
- Unsupervised clustering (Leiden/Louvain)
- Expert-curated lineage assignments

Major Cell Classes:

T cells: CD4⁺ naïve, central memory (Tcm), effector memory (Tem), regulatory (Treg), Th1/Th2/Th17 subsets, and CD8⁺ subtypes
B cells: Naïve B, memory B, plasma cells
NK cells: CD56⁺ bright and dim NK cells
Monocytes/DCs: Classical, intermediate, non-classical monocytes; plasmacytoid/myeloid DCs
Other: γδ T cells, MAIT cells, progenitor-like cells

Each .parquet file contains a cell_type_annotation column specifying the immune subpopulation, and a barcode column for cell tracking across modalities.

Note: The barcode column serves as the primary key for each single cell and can be used to map across modalities such as RNA expression, surface protein markers, and immune receptor features (TCR/BCR).

File Structure

This repository includes 14 .parquet files, each representing a unique PBMC sample from a specific donor/timepoint.

Each file includes:

barcode: Unique cell ID
cell_type_annotation: Assigned immune subpopulation
Expression + surface protein features (e.g., nCount_RNA, CD4, CD8A, etc.)

These tables support:

Cell type classification
Dimensionality reduction (UMAP, t-SNE)
Age-association modeling
Multi-omic integration

Note: Raw .h5ad gene expression matrices are available via Synapse.

Quickstart (Python)

import pandas as pd
from huggingface_hub import hf_hub_download

# Example: Load one sample
file_path = hf_hub_download(repo_id="longevity-db/sc-human-blood-aging-atlas", filename="AS044.parquet")
df = pd.read_parquet(file_path)

# Preview
print(df.shape)
print(df[['barcode', 'cell_type_annotation']].head())

Suggested ML Use Cases

🧬 Cell type classification
🧓 Age prediction from immune profiles
🧭 Trajectory inference and pseudotime modeling
🧩 Dimensionality reduction + clustering
📊 Cell-type-specific differential expression with age
🔁 Transfer learning across donors or tissues

Related Resources

📄 Original Publication – Immunity, 2023
🧪 Synapse Project (Raw data)
🔬 CellxGene Viewer (if available) (optional)

Citation

Hafemeister et al., "Single-cell atlas of healthy human blood unveils age-related loss of NKG2C+GZMB− CD8+ memory T cells and accumulation of type 2 memory CD4+/CD8+ T cells."
Immunity (2023) — DOI: 10.1016/j.immuni.2023.10.003

Contributing

This dataset was created for the Longevity x AI Hackathon 2025. Contributions, improvements, and additional analyses are welcome! For questions or collaboration opportunities, please contact [your-email@domain.com].

This dataset represents a novel intersection of cancer genomics, digital pathology, and aging research, enabling unprecedented insights into the cellular basis of human aging.

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