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""" Data loader for telemetry log files """ from functools import reduce import math from matplotlib import pyplot import pandas as pd from scipy.optimize import curve_fit import statistics from typing import Iterable, List, Optional, Tuple, Union from telemetrydisc.database import get_logs_table, get_raw_data from t...
pd.Series(index=data.index)
pandas.Series
import decimal import numpy as np from numpy import iinfo import pytest import pandas as pd from pandas import to_numeric from pandas.util import testing as tm class TestToNumeric(object): def test_empty(self): # see gh-16302 s = pd.Series([], dtype=object) res = to_numeric(s) ...
tm.assert_series_equal(res, expected)
pandas.util.testing.assert_series_equal
# Project: fuelmeter-tools # Created by: # Created on: 5/7/2020 from pandas.tseries.offsets import MonthEnd from puma.Report import Report import pandas as pd import numpy as np import puma.plot as pplot import puma.tex as ptex import datetime import os class MultiMonthReport(Report): def __init__(self,start,end...
pd.Grouper(freq='M')
pandas.Grouper
######################################################################### ######################################################################### # Classes for handling genome-wide association input and output files, ## # analysis and qc programs, and post-hoc analyses ## ########################...
pd.DataFrame(dup_dict)
pandas.DataFrame
""" <NAME>017 PanCancer Classifier scripts/pancancer_classifier.py Usage: Run in command line with required command argument: python pancancer_classifier.py --genes $GENES Where GENES is a comma separated string. There are also optional arguments: --diseases comma separated string of disease ty...
pd.DataFrame(y_alt_df)
pandas.DataFrame
from calendar import month_name, monthrange from pathlib import Path, PureWindowsPath import matplotlib.pyplot as plt import numpy as np import pandas as pd import seaborn as sns import math as mt from dataclima import helioclim3 class energycalc: def __init__(self, df, horizon, ...
pd.concat([self.df, dfprod], axis=1, sort=False)
pandas.concat
# Code written by <NAME> # Purpose: Converts all subdirectories of CSV and TSV files into one Excel file. # Required modules installed from PIP: pandas, xlsxwriter import os import pandas as pd class DataToExcel: """ Converts all subdirectory data into an unified Excel file.""" def __init__(self): ...
pd.read_csv(each_file, sep='\t', skiprows=skipping_rows)
pandas.read_csv
import pandas as pd import numpy as np import unicodedata import re import json import nltk nltk.download('stopwords') nltk.download('wordnet') from nltk.tokenize.toktok import ToktokTokenizer from nltk.corpus import stopwords from sklearn.model_selection import train_test_split from sklearn.feature_selection import S...
pd.to_datetime(date_df[column_name])
pandas.to_datetime
import numpy as np import tempfile import logging import pandas as pd from sklearn.metrics import jaccard_score import rpGraph ###################################################################################################################### ############################################## UTILITIES ###############...
pd.DataFrame(meas_sim)
pandas.DataFrame
import sys import os import glob as gb import sqlite3 import pandas as pd def open_eso(file): with open(file, 'r') as f: flist = f.readlines() return flist def get_data_dict(flist): data_dict = [] for f in flist: if "End of Data Dictionary" in f: ...
pd.MultiIndex.from_tuples(multi_rows)
pandas.MultiIndex.from_tuples
# The analyser import pandas as pd import matplotlib.pyplot as plt import dill import os import numpy as np from funcs import store_namespace from funcs import load_namespace import datetime from matplotlib.font_manager import FontProperties from matplotlib import rc community = 'ResidentialCommunity' sim_ids = ['M...
pd.to_datetime(opt_stats_df1.index)
pandas.to_datetime
import json from datetime import datetime import pandas as pd import scrapy class MatchesSpider(scrapy.Spider): # set the attributes for the spider name = "matches" def __init__(self, **kwargs): """initialize the data""" super().__init__(**kwargs) # create data frames and safe t...
pd.to_datetime(self.matches_df["Start_Time"])
pandas.to_datetime
# Preprocessing time series data import pandas as pd import numpy as np from tsfresh import extract_features df = pd.read_csv('complete_df_7.csv') df.drop('Unnamed: 0', axis=1, inplace=True) df['stock_open'] = df['stock_open'].astype(float) # Create aggregate of sales down to product level aggregate = df.groupby(['sku...
pd.to_datetime(df['tran_date'])
pandas.to_datetime
import itertools import pandas as pd import requests from task_geo.dataset_builders.nasa.references import PARAMETERS def nasa_data_loc(lat, lon, str_start_date, str_end_date, parms_str): """ Extract data for a single location. Parameters ---------- lat : string lon : string str_start_d...
pd.DataFrame(data_json['features'][0]['properties']['parameter'])
pandas.DataFrame
import pandas as pd import os os.chdir("/Users/laurahughes/GitHub/cvisb_data/sample-viewer-api/src/static/data/") # Helper functions for cleanup... import helpers viral_ebola = "/Users/laurahughes/GitHub/cvisb_data/sample-viewer-api/src/static/data/input_data/expt_summary_data/viral_seq/survival_dataset_ebov_02262019...
pd.concat([lsv, ebv])
pandas.concat
# Copyright (c) 2021 Sony Group Corporation and Hanjuku-kaso Co., Ltd. All Rights Reserved. # # This software is released under the MIT License. # http://opensource.org/licenses/mit-license.php import argparse from distutils.util import strtobool from pathlib import Path import pickle import warnings from sklearn.exc...
DataFrame()
pandas.DataFrame
from utils.utils import load_yaml import pandas as pd import logging logger = logging.getLogger(__name__)
pd.set_option('display.max_columns', 10)
pandas.set_option
""" Unit test of Inverse Transform """ import unittest import pandas as pd import numpy as np import category_encoders as ce import catboost as cb import sklearn import lightgbm import xgboost from shapash.utils.transform import inverse_transform, apply_preprocessing, get_col_mapping_ce class TestInverseTransformCate...
pd.DataFrame({'city': ['chicago', np.nan]})
pandas.DataFrame
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Mon Nov 2 14:43:48 2020 @author: afo """ import pandas as pd import os from os import listdir from os.path import abspath, isfile, join from inspect import getsourcefile import operator from math import nan import numpy as np # custom function from get_av...
pd.concat([end_results, all_tickers], axis=1)
pandas.concat
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Wed Oct 17 13:06:36 2018 @author: shlomi OK 1)fix and get time series of SAOD volcanic index - see how kuchar did it he did it SAD = surface area density of aerosols at 54 hPa 2)use enso3.4 anom for enso 3)use singapore qbo(level=50) for qbo 4)use solar f10...
pd.date_range('1979-01-01', '2019-01-01', freq='MS')
pandas.date_range
# Arithmetic tests for DataFrame/Series/Index/Array classes that should # behave identically. # Specifically for datetime64 and datetime64tz dtypes from datetime import ( datetime, time, timedelta, ) from itertools import ( product, starmap, ) import operator import warnings import numpy as np impo...
pd.offsets.DateOffset(years=1)
pandas.offsets.DateOffset
# Copyright (c) 2020 Spanish National Research Council # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law ...
pd.to_datetime(df.fecha, format='%Y%m%d')
pandas.to_datetime
#!/usr/bin/env python3 import numpy as np import pandas as pd import statsmodels.api as sm import statsmodels.formula.api as smf if __name__ == '__main__': # read data file df =
pd.read_csv('durante_etal_2013_study1.txt', delimiter='\t')
pandas.read_csv
# -*- coding: utf-8 -*- from Functions import utils as ut from plotly.subplots import make_subplots from statistics import mean, stdev from datetime import timedelta from functools import reduce import plotly.graph_objs as go import plotly as py import pandas as pd import numpy as np import collections import itertools...
pd.read_csv(filename)
pandas.read_csv
#!/usr/bin/python # -*- coding: utf-8 -*- from abc import ABC import logging import os import sys import pandas as pd # setup logger logging.basicConfig() logger = logging.getLogger(__name__) logger.setLevel(logging.INFO) from .operator import IOperator class CSV(IOperator, ABC): """ Instance Object for COCO ...
pd.isnull(csv_ann_df['class'])
pandas.isnull
# # process_species_by_dataset # # We generated a list of all the annotations in our universe; this script is # used to (interactively) map them onto the GBIF and iNat taxonomies. Don't # try to run this script from top to bottom; it's used like a notebook, not like # a script, since manual review steps are required. ...
pd.read_csv(master_table_file)
pandas.read_csv
import numpy as np import pandas as pd from scipy.stats import mode from tqdm import tqdm from geopy.geocoders import Nominatim from datetime import datetime def handle_bornIn(x): skip_vals = ['16-Mar', '23-May', 'None'] if x not in skip_vals: return datetime(2012, 1, 1).year - datetime(int(x), 1, 1)...
pd.isna(data_content.bikers_df['latitude'])
pandas.isna
# -*- coding: utf-8 -*- # Copyright (c) 2016-2017 by University of Kassel and Fraunhofer Institute for Wind Energy and # Energy System Technology (IWES), Kassel. All rights reserved. Use of this source code is governed # by a BSD-style license that can be found in the LICENSE file. import pandas as pd from numpy impo...
pd.Series()
pandas.Series
# -*- coding: utf-8 -*- """ This module is for running predictions. Examples: Example command line executable:: $ python predict.py """ import logging from pathlib import Path import click import pandas as pd from cloudpickle import load from orbyter_demo.util.config import parse_config from orbyter_dem...
pd.DataFrame(yhat, columns=["MedianHouseValue"])
pandas.DataFrame
# -*- coding: utf-8 -*- # pylint: disable=E1101,E1103,W0232 import os import sys from datetime import datetime from distutils.version import LooseVersion import numpy as np import pandas as pd import pandas.compat as compat import pandas.core.common as com import pandas.util.testing as tm from pandas import (Categor...
pd.Categorical(1)
pandas.Categorical
from django.views.generic import TemplateView, CreateView import pandas as pd import numpy as np ###importing surprise library to implement the recommending systems needed from surprise import NMF, SVD, SVDpp, KNNBasic, KNNWithMeans, KNNWithZScore, CoClustering from surprise.model_selection import cross_validate from s...
pd.read_csv('main/ml-100k/u.data', sep='\t', names=columns)
pandas.read_csv
import unittest import numpy as np import pandas as pd from sklearn.cluster import DBSCAN, KMeans from sklearn.covariance import EmpiricalCovariance, MinCovDet from sklearn.gaussian_process import GaussianProcessRegressor from sklearn.mixture import GaussianMixture from dsbox.ml.outliers import CovarianceOutliers, Ga...
pd.DataFrame([1, 0, 0, 1, 10, 2, 115, 110, 32, 16, 2, 0, 15, 1])
pandas.DataFrame
# -*- coding: utf-8 -*- ''' Created on Mon Sep 28 16:26:09 2015 @author: r4dat ''' # ICD9 procs from NHSN definition. # Diabetes diagnoses from AHRQ version 5 SAS program, CMBFQI32.TXT # sample string generator print((','.join(map(str, [str(x) for x in range(25040,25094)]))).replace(',','","')) # # "25000"-"250...
pd.set_option('expand_frame_repr', False)
pandas.set_option
import numpy as np import pandas as pd import scipy.integrate import tqdm def single_nutrient(params, time, gamma_max, nu_max, precursor_mass_ref, Km, omega, phi_R, phi_P, num_muts=1, volume=1E-3): """ Defines the system of ordinary differenetial equations (ODEs) which describe accu...
pd.DataFrame(out, columns=colnames)
pandas.DataFrame
# -*- coding: utf-8 -*- """Fatal Police Shooting Automatically generated by Colaboratory. Original file is located at https://colab.research.google.com/drive/1Zg-tic0ZjTQSkN0YXI2CtB3ix9H---Fh """ import pandas as pd df =
pd.read_csv('database.csv')
pandas.read_csv
# -*- coding: utf-8 -*- """ Authors: <NAME>, <NAME>, <NAME>, and <NAME> IHE Delft 2017 Contact: <EMAIL> Repository: https://github.com/gespinoza/hants Module: hants """ from __future__ import division import netCDF4 import pandas as pd import numpy as np import datetime import math import os import o...
pd.np.arange(ni)
pandas.np.arange
# Contributions to SBDF reader functionality provided by PDF Solutions, Inc. (C) 2021 """ TODOS: * Return table/column metadata as well as the table data * Support Decimal type * Support _ValueArrayEncodingId.RUN_LENGTH array type * Contemplate making an SBDF writer """ from contextlib import ExitStack from pathlib im...
pd.DataFrame(pandas_data)
pandas.DataFrame
""" # # scikit_optim.py # # Copyright (c) 2018 <NAME>. MIT License. # """ import numpy as np import os import pandas as pd import sys import time import warnings import sklearn.metrics from sklearn.ensemble import RandomForestClassifier from sklearn.linear_model import LogisticRegression from sklearn.mixture import G...
pd.DataFrame.from_dict(summary_dict_cv, orient='index')
pandas.DataFrame.from_dict
""" .. _twitter: Twitter Data API ================ """ import logging from functools import wraps from twython import Twython import pandas as pd from pandas.io.json import json_normalize TWITTER_LOG_FMT = ('%(asctime)s | %(levelname)s | %(filename)s:%(lineno)d ' '| %(funcName)s | %(message)s') ...
pd.DataFrame(place_trends[0]['trends'])
pandas.DataFrame
import argparse import pandas as pd from forexconnect import ForexConnect, fxcorepy import common_samples def parse_args(): parser = argparse.ArgumentParser(description='Process command parameters.') common_samples.add_main_arguments(parser) common_samples.add_instrument_timeframe_arguments(parser) ...
pd.Series(doi)
pandas.Series
#!/usr/bin/env python """Extract subcatchment runoff summary results from SWMM report file. Reads subcatchment geometries from a GisToSWMM5 generated subcatchment geometry file (*_subcatchments.wkt) file and subcatchment runoff results from a SWMM report (by default .rpt) file. The script merges the information and sa...
pd.merge(df1, df2, on='name')
pandas.merge
import pandas as pd from utils.constants import * def parse_devices(filename: str) -> pd.DataFrame: data =
pd.read_json(filename, orient="records")
pandas.read_json
from datetime import datetime from io import StringIO import itertools import numpy as np import pytest import pandas.util._test_decorators as td import pandas as pd from pandas import ( DataFrame, Index, MultiIndex, Period, Series, Timedelta, date_range, ) import pandas._testing as tm ...
tm.assert_frame_equal(result, expected)
pandas._testing.assert_frame_equal
import pandas as pd import numpy as np from sklearn.preprocessing import PolynomialFeatures from sklearn.linear_model import LinearRegression import matplotlib.pyplot as plt from sklearn.preprocessing import StandardScaler import pickle from sklearn.metrics import r2_score import warnings from scipy.interpolate import ...
pd.read_csv("data/JHU/jhu_data.csv", dtype={"FIPS":str})
pandas.read_csv
import logging from concurrent.futures import ThreadPoolExecutor from io import BytesIO from typing import List import requests import numpy as np import pandas as pd from catboost import CatBoost, Pool from metaspace import SMInstance from sm.engine.annotation.diagnostics import ( get_dataset_diagnostics, Di...
pd.DataFrame(results)
pandas.DataFrame
""" This module provides a helper object to manage an updateable timechart search through the export API which doesn't support aggregated live searches. NOTE: IF you stumbled upon this, know that this is pretty much just a POC/playground. """ import json from threading import Lock from snaptime import snap_tz import ...
pd.pivot_table(df, index=timefield, values=datafields, columns=groupby, fill_value=fill)
pandas.pivot_table
# fmt: off import os import h5py import torch import copy import ipywidgets as ipyw import scipy import pandas as pd import datetime import time import itertools import qgrid import shutil import subprocess from random import shuffle from torch.autograd import Variable from torch.utils.data import Dataset, DataLoader ...
pd.concat(df_list)
pandas.concat
import pandas as pd import numpy as np import os # acquire from pydataset import data from datetime import date from scipy import stats # turn off pink warning boxes import warnings warnings.filterwarnings("ignore") import sklearn from sklearn.model_selection import train_test_split # Train/Split the data~~~~~~...
pd.concat([zero_val, null_count, mis_val_percent], axis=1)
pandas.concat
import pandas as pd import plotly.express as px import plotly.graph_objects as go from plotly.subplots import make_subplots from datetime import datetime, timedelta import dash import dash_core_components as dcc import dash_html_components as html from dash.dependencies import Input, Output, State import dash_actions...
pd.to_datetime(df["date"], format="%Y-%m-%d %H:%M:%S")
pandas.to_datetime
#!/usr/bin/python import unittest import cv2 import numpy as np import os import pandas as pd from pandas.testing import assert_frame_equal from numpy.testing import assert_allclose from PIE import track_colonies # load in a test timecourse colony property dataframe # NB: this case is quite pathological, preliminary ...
assert_frame_equal(expected_property_df, test_property_df, check_index_type = False)
pandas.testing.assert_frame_equal
import numpy as np import pytest import pandas.util._test_decorators as td import pandas as pd from pandas import ( CategoricalIndex, DataFrame, Index, NaT, Series, date_range, offsets, ) import pandas._testing as tm class TestDataFrameShift: @pytest.mark.parametrize( "input_...
tm.assert_equal(dtobj, unshifted)
pandas._testing.assert_equal
# coding: utf-8 # Author: <NAME> <<EMAIL>> # License: BSD 3 clause import numpy as np import pandas as pd from sklearn.linear_model import LogisticRegression from sklearn.model_selection import StratifiedKFold from copy import copy as make_copy from .classifier import * import time class StackingClassifier(): ...
pd.concat([X, preds], axis=1)
pandas.concat
#!/usr/bin/env python import torch from torch.utils.data import DataLoader import pickle from rdkit import Chem from rdkit import rdBase from tqdm import tqdm from rdkit.Chem import AllChem from data_structs import MolData, Vocabulary from model import RNN from utils import Variable, decrease_learning_rate, unique imp...
pd.Series(data=epoch_lst)
pandas.Series
import pandas as pd from upgrade_model import k8s_releases_loader k8s_releases = k8s_releases_loader.load() def compute(id, start_date, end_date, first_version, upgrade_every): days = pd.date_range(start=start_date, end=end_date, freq='D') environment_ids = [id] environment_state = pd.DataFrame( ...
pd.MultiIndex.from_product([environment_ids,days],names=['environment_id','at_date'])
pandas.MultiIndex.from_product
import pandas as pd from sklearn import metrics from sklearn.linear_model import LogisticRegression import time import multiprocessing as mp start_time=time.time() def svm(location1,location2): data=pd.read_csv(location1) data_columns=data.columns xtrain = data[data_columns[data_columns != 'typeoffraud']...
pd.read_csv(location5)
pandas.read_csv
import os import json import pandas as pd statements = [] evidences = [] adjective_frequencies = {'sub': {}, 'obj': {}} _adjective_frequencies = {'sub': {}, 'obj': {}} adjective_names = {'sub': {}, 'obj': {}} _adjective_names = {'sub': {}, 'obj': {}} adjective_pairs = {} _adjective_pairs = {} with open('../../data/c...
pd.DataFrame({'Adjective': adjective, 'frequency': frequency})
pandas.DataFrame
""" The ``risk_models`` module provides functions for estimating the covariance matrix given historical returns. The format of the data input is the same as that in :ref:`expected-returns`. **Currently implemented:** - fix non-positive semidefinite matrices - general risk matrix function, allowing you to run any ris...
pd.DataFrame(raw_cov_array, index=assets, columns=assets)
pandas.DataFrame
#!/usr/bin/env python3 # various functions and mixins for downstream genomic and epigenomic anlyses import os import glob import re import random from datetime import datetime import time from pybedtools import BedTool import pandas as pd import numpy as np from tqdm import tqdm_notebook, tqdm # Get Current Git Co...
pd.DataFrame(index=order)
pandas.DataFrame
import numpy as np import pandas as pd from sklearn.linear_model import LogisticRegression from joblib import dump, load from rulevetting.templates.model import ModelTemplate class Model(ModelTemplate): def __init__(self): self.model = load('./notebooks/models/lr_model_all.joblib') def predict(...
pd.concat((df_train, df_tune, df_test))
pandas.concat
import logging import pandas as pd from easysparql import easysparqlclass import seaborn as sns import matplotlib.pyplot as plt from pandas.api.types import CategoricalDtype from tadaqq.util import compute_scores PRINT_DIFF = True def get_logger(name, level=logging.INFO): logger = logging.getLogger(name) for...
pd.concat(dfs, ignore_index=True)
pandas.concat
# -*- coding: utf-8 -*- """ Created on Fri Aug 10 17:05:23 2018 @author: <NAME> """ # -*- coding: utf-8 -*- """ Description: Risky Comments Extractor Based on Risky category bag of words. """ import numpy as np import os import pandas as pd import re from textblob import TextBlob; from textblob import Wor...
pd.ExcelFile(Sowfile)
pandas.ExcelFile
# importar bibliotecas import pandas as pd import numpy as np import win32com.client as win32 import xlsxwriter # importar a base de dados tabela_vendas = pd.read_excel('Vendas.xlsx') # visualizar a base de dados pd.set_option('display.max_columns', None) # print(tabela_vendas) print('\nTabela de Vendas: ') pri...
pd.pivot_table(tabela_vendas, index= ['ID Loja'], values='Valor Final', aggfunc='sum')
pandas.pivot_table
import pandas import bmeg.ioutils from bmeg.emitter import JSONEmitter from bmeg import (Aliquot, DrugResponse, Project, Compound, Compound_Projects_Project, DrugResponse_Aliquot_Aliquot, DrugResponse_Compounds_Compound) def transform(cellline_lookup_path='source...
pandas.read_csv(drug_annots_path, sep="\t")
pandas.read_csv
# Copyright (c) Microsoft Corporation. # Licensed under the MIT License. from collections import OrderedDict import pandas as pd import pathlib class Report: # daily report of the account # contain those followings: returns, costs turnovers, accounts, cash, bench, value # update report def __init__(...
pd.Series(self.values)
pandas.Series
import numpy as np import os.path import pandas as pd import sys import math # find parent directory and import base (travis) parentddir = os.path.abspath(os.path.join(os.path.dirname(__file__), os.path.pardir)) sys.path.append(parentddir) from base.uber_model import UberModel, ModelSharedInputs # print(sys.path) # ...
pd.Series([], dtype="float")
pandas.Series
import pandas as pd from .datastore import merge_postcodes from .types import ErrorDefinition from .utils import add_col_to_tables_CONTINUOUSLY_LOOKED_AFTER as add_CLA_column # Check 'Episodes' present before use! def validate_165(): error = ErrorDefinition( code = '165', description = 'Data entry for moth...
pd.to_datetime(L2_eps['DEC'], format='%d/%m/%Y', errors='coerce')
pandas.to_datetime
# -*- coding:utf-8 -*- # /usr/bin/env python """ Date: 2021/7/8 22:08 Desc: 金十数据中心-经济指标-美国 https://datacenter.jin10.com/economic """ import json import time import pandas as pd import demjson import requests from akshare.economic.cons import ( JS_USA_NON_FARM_URL, JS_USA_UNEMPLOYMENT_RATE_URL, JS_USA_EIA_...
pd.to_datetime(date_list)
pandas.to_datetime
import os, sys from pathlib import Path import math, random import numpy as np import pandas as pd import matplotlib.pyplot as plt import matplotlib.patches as patches try: from data_handle.sad_object import * except: sys.path.append(os.path.join(os.path.dirname(__file__), '..')) from data_handle.sad_obj...
pd.DataFrame(sample_list, columns=df_all.columns)
pandas.DataFrame
import os import cv2 import numpy as np from keras.models import load_model import keras.layers as layers import keras.models as models files = [] path_to_dataset = os.getcwd() files.extend(os.listdir(path_to_dataset + "/dataset5")) path = 'dataset5/' images = [] for i in files: img = cv2.imread(path+i) img = ...
pd.DataFrame(finale)
pandas.DataFrame
#!/usr/bin/env python3 """ DrugCentral db utility functions. """ import os,sys,re,json,logging,yaml import pandas as pd from pandas.io.sql import read_sql_query import psycopg2,psycopg2.extras ############################################################################# def Connect(dbhost, dbport, dbname, dbusr, dbpw)...
pd.concat([df, df_this])
pandas.concat
#read a csv file, loading it into a DataFrame import numpy as np #python's array proccesing / linear algebra library import pandas as pd #data processing / stats library import matplotlib.pyplot as plt #data visualization import csv #read in some data fn = 'polling_data.csv' df=pd.read_csv(fn...
pd.to_datetime('1899-12-30')
pandas.to_datetime
# -*- coding: utf-8 -*- import pandas as pd import numpy as np from argcheck import (expect_types, optional, preprocess) from xutils import py_assert from alphaware.const import INDEX_FACTOR from alphaware.enums import (FreqType, OutputDataFormat...
pd.concat([ret, data_concat], axis=0)
pandas.concat
# -*- coding: utf-8 -*- """ Created on Sat Apr 10 15:36:18 2021 Who would be so cruel to someone like you? No one but you Who would make the rules for the things that you do? No one but you I woke up this morning, looked at the sky I thought of all of the time passing by It didn't matter how hard we tried '...
pd.DataFrame([GAS_TG_Base])
pandas.DataFrame
from io import StringIO from copy import deepcopy import numpy as np import pandas as pd import re from glypnirO_GUI.get_uniprot import UniprotParser from sequal.sequence import Sequence from sequal.resources import glycan_block_dict # Defining important colume names within the dataset sequence_column_name = "Peptide...
pd.read_csv(area_filename, sep="\t")
pandas.read_csv
## Convert .Bed to .HDF5 file (saving mean and std genotype seperately) import pandas as pd import os from pysnptools.snpreader import SnpData from pysnptools.snpreader import Pheno, Bed import h5py import numpy as np from tqdm import tqdm import argparse def main(args): genome_path = args.genome_path ...
pd.merge(iid, phenotype, on=['IID','FID'])
pandas.merge
# NO TIENE LOS DATOS QUE HACEN FALTA # SIN PROCESAR, MUCHO TRABAJO POR MENOS DE 100k REGISTROS UTILES # %% import os import pandas as pd import numpy as np import datetime from scripts import motor, quitardecimal, valores, modelogeneral, especifico, origensegunvin, version, modelogenerico, especifico2, corregirmodelo,...
pd.set_option('display.max_colwidth', -1)
pandas.set_option
""" Copyright 2021 <NAME>. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distribute...
pd.DataFrame.from_dict(training_data, orient='index')
pandas.DataFrame.from_dict
# script with function to prepare and support evaluation import glob import yaml import pandas as pd import os # load simulation results and calculate RTT # network and algorithm name are used to filter the results def sim_delays(network, algorithm): sim_results = glob.glob('../eval/{}/{}/{}*.yaml'.format(network...
pd.DataFrame(columns=input_cols + ['src', 'dest', 'sim_rtt', 'emu_rtt'])
pandas.DataFrame
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Monday 3 December 2018 @author: <NAME> """ import os import pandas as pd import numpy as np import feather import time from datetime import date import sys from sklearn.cluster import MiniBatchKMeans, KMeans from sklearn.metrics import silhouette_score fr...
pd.DataFrame()
pandas.DataFrame
import os import sys from copy import copy from functools import wraps from time import time import skimage.filters import funcs import numpy as np import pandas as pd import seaborn as sns import uncertainties as un from funcs.post_processing.images.soot_foil import deltas as pp_deltas from matplotlib import patches...
pd.HDFStore("/d/Data/Processed/Data/data_soot_foil.h5", "r")
pandas.HDFStore
import os import zipfile as zp import pandas as pd import numpy as np import core import requests class Labels: init_cols = [ 'station_id', 'station_name', 'riv_or_lake', 'hydroy', 'hydrom', 'day', 'lvl', 'flow', 'temp', 'month'] trans_cols = [ 'date', 'year', 'month', 'day', 'hydroy', 'hydrom', 'station_id'...
pd.read_csv('metadata/hydro_stations.csv', encoding='utf-8')
pandas.read_csv
from common.util import ReviewUtil import pandas as pd from collections import Counter import numpy as np from scipy.stats import norm import os class ZYJTemporalAnalysis: def __init__(self, input_dir: str, threshold: float = 0.9999, num_day_thres: float = 100.): self.input_path = input_dir self.t...
pd.to_datetime(df["referenceTime"])
pandas.to_datetime
import os from io import BytesIO import zipfile import time import warnings import json from pathlib import Path import argparse import requests import pandas as pd import geopandas as gpd import fiona DATA_DIR = Path(os.path.dirname(__file__), "../data") RAW_DIR = Path(DATA_DIR, "raw") PROCESSED_DIR = Path(DATA_DIR,...
pd.DataFrame(sensors)
pandas.DataFrame
""" json 불러와서 캡션 붙이는 것 """ import json import pandas as pd path = './datasets/vqa/v2_OpenEnded_mscoco_train2014_questions.json' with open(path) as question: question = json.load(question) # question['questions'][0] # question['questions'][1] # question['questions'][2] df = pd.DataFrame(question['questions']) d...
pd.DataFrame(val_cap['data'])
pandas.DataFrame
from datetime import datetime, time, timedelta from pandas.compat import range import sys import os import nose import numpy as np from pandas import Index, DatetimeIndex, Timestamp, Series, date_range, period_range import pandas.tseries.frequencies as frequencies from pandas.tseries.tools import to_datetime impor...
frequencies.get_freq_code('H')
pandas.tseries.frequencies.get_freq_code
import datetime from datetime import timedelta from distutils.version import LooseVersion from io import BytesIO import os import re from warnings import catch_warnings, simplefilter import numpy as np import pytest from pandas.compat import is_platform_little_endian, is_platform_windows import pandas.util._test_deco...
tm.assert_frame_equal(df, store["b"])
pandas.util.testing.assert_frame_equal
import numpy as np import pandas as pd import matplotlib from importlib import reload import matplotlib.pyplot as plt import elements elements = reload(elements) from elements.event import Event import os from scipy.fft import fft, fftfreq, ifft #%% #meta data meta_event = pd.read_csv('data/meta_data.csv') #List of ev...
pd.read_pickle('data/causes.pkl')
pandas.read_pickle
# -*- coding: utf-8 -*- """ Created on Wed Mar 21 10:00:33 2018 @author: jdkern """ from __future__ import division from sklearn import linear_model from statsmodels.tsa.api import VAR import scipy.stats as st import pandas as pd import matplotlib.pyplot as plt import numpy as np import seaborn as sns ##############...
pd.read_csv('PNW_hydro/FCRPS/Path_dams.csv',header=None)
pandas.read_csv
# --- # jupyter: # jupytext: # formats: ipynb,py # text_representation: # extension: .py # format_name: light # format_version: '1.5' # jupytext_version: 1.9.1+dev # kernelspec: # display_name: Python [conda env:biovectors] # language: python # name: conda-env-biovectors-...
pd.DataFrame(remaining_ids, columns=["pmid"])
pandas.DataFrame
import numpy as np import pytest from pandas import Categorical, Series import pandas._testing as tm @pytest.mark.parametrize( "keep, expected", [ ("first", Series([False, False, False, False, True, True, False])), ("last", Series([False, True, True, False, False, False, False])), (Fa...
Series([False, False, True, True])
pandas.Series
import numpy as np import pandas as pd from sklearn.metrics import roc_auc_score, auc, roc_curve, confusion_matrix, fbeta_score from imblearn.over_sampling import BorderlineSMOTE from collections import Counter import gc as gc from sklearn.feature_selection import RFE #------------------------------------------------...
pd.merge(dataframe, dataframe_work, on=fix_column)
pandas.merge
'''Some helper functions for data ETL including: - Load features from dataframe - Normalization and denormalize - Load dataset, pytorch dataset - Load adjacent matrix, load graph network - Preprocess dataset ''' import numpy as np import pandas as pd import torch from datetime import datet...
pd.read_csv(feat_path)
pandas.read_csv
from datetime import datetime, timedelta import inspect import numpy as np import pytest from pandas.core.dtypes.common import ( is_categorical_dtype, is_interval_dtype, is_object_dtype, ) from pandas import ( Categorical, DataFrame, DatetimeIndex, Index, IntervalIndex, MultiIndex...
RangeIndex(stop=2)
pandas.RangeIndex
import inspect import os from unittest.mock import MagicMock, patch import numpy as np import pandas as pd import pytest import woodwork as ww from evalml.model_understanding.graphs import visualize_decision_tree from evalml.pipelines.components import ComponentBase from evalml.utils.gen_utils import ( SEED_BOUND...
pd.Int64Index([1])
pandas.Int64Index
import pandas as pd import numpy as np import os # Function to import multiple files into a dictionary - use for global country and region data. def get_data(path, name): '''Function to read in data files from csv and import it into a dictionary of dataframes - used for global country and region data.''' file...
pd.DatetimeIndex(df['date'])
pandas.DatetimeIndex
import matplotlib.pyplot as plt import numpy as np import pandas as pd def plot_testing_acc(x, y): df = pd.DataFrame({'x': x, 'y': y, 'z': y}) f1 = plt.figure(1) plt.plot('x','y',data=df, marker='o', color='blue') plt.title("Testing accuracy vs Number of Batches (100s)") plt.xlabel("Number of Batches") plt.y...
pd.DataFrame({'x1': batches, 'y1': label_1_height})
pandas.DataFrame
# -*- coding: utf-8 -*- import functools import os from collections import Counter from multiprocessing import Pool as ThreadPool from random import sample import matplotlib.pyplot as plt import matplotlib.ticker as ticker import numpy as np import pandas as pd from apps.kemures.kernel.config.global_var import MAX_TH...
pd.merge(self.__song_msd_df, gender_df, how='inner', left_on='track_id', right_on='track_id')
pandas.merge
# get the latest version of pandas_profiling from pathlib import Path import numpy as np import pandas as pd from pandas_profiling import ProfileReport if __name__ == "__main__": # data set location http://eforexcel.com/wp/downloads-18-sample-csv-files-data-sets-for-testing-sales/ df=pd.read_csv("/home/prasad/Down...
pd.to_datetime(df['Ship Date'],infer_datetime_format=True )
pandas.to_datetime
# coding: utf8 import torch import numpy as np import os import warnings import pandas as pd from time import time import logging from torch.nn.modules.loss import _Loss import torch.nn.functional as F from sklearn.utils import column_or_1d import scipy.sparse as sp from clinicadl.tools.deep_learning.iotools import c...
pd.DataFrame(metrics, index=[0])
pandas.DataFrame
#!/usr/bin/env python # -*- coding: utf-8 -*- """ Purpose: Perform Incremental PCA on QPESUMS data. Description: --input: directory that contains QPESUMS data as *.npy (6*275*162) --output: the prefix of output files. --filter: the file contains a list of timestamp that filters the input data for processing. --...
pd.read_csv(args.filter)
pandas.read_csv