Split (2)

train · 11.6k rows

chrom stringclasses 12 values	pos int64 36.1k 249M	ref stringclasses 4 values	alt stringclasses 4 values	label bool 2 classes	subset stringclasses 8 values	match_group int64 0 2.16k	rsid stringlengths 3 15	pip float64 0 1	traits stringclasses 279 values	MAF float64 0 0.5	ld_score float64 1.01 3.79k	consequence stringclasses 13 values	consequence_cre stringclasses 29 values	exon_closest_pc_gene_id stringlengths 15 15	distance_exon_pc int64 0 1.68M	exon_closest_nc_gene_id stringlengths 15 15	distance_exon_nc int64 0 507k	distance_exon int64 0 507k	exon_closest_gene_id stringlengths 15 15	consequence_final stringclasses 28 values	tss_closest_pc_gene_id stringlengths 15 15	distance_tss_pc int64 0 1.69M	tss_closest_nc_gene_id stringlengths 15 15	distance_tss_nc int64 0 531k	distance_tss int64 0 531k	tss_closest_gene_id stringlengths 15 15	consequence_group stringclasses 8 values	distance_tss_pc_bin stringclasses 4 values	distance_exon_pc_bin stringclasses 7 values
X	149,527,012	G	T	false	tss_proximal	2,140	rs72611289	0.000327		0.32765	87.433	upstream_gene_variant	PLS_flank	ENSG00000241489	0	ENSG00000241489	0	0	ENSG00000241489	tss_proximal	ENSG00000010404	5,915	ENSG00000238039	747	747	ENSG00000238039	tss_proximal	tss_prox:b2	tss_prox:b0
X	150,360,935	A	G	false	tss_proximal	2,162	rs512425	0.00003		0.098618	18.136	upstream_gene_variant	PLS_flank	ENSG00000013619	636	ENSG00000013619	486	486	ENSG00000013619	tss_proximal	ENSG00000013619	636	ENSG00000013619	486	486	ENSG00000013619	tss_proximal	tss_prox:b1	tss_prox:b1
X	150,361,209	A	G	false	tss_proximal	2,162	rs111713753	0.000031		0.09867	18.172	upstream_gene_variant	CA-H3K4me3	ENSG00000013619	362	ENSG00000013619	212	212	ENSG00000013619	tss_proximal	ENSG00000013619	362	ENSG00000013619	212	212	ENSG00000013619	tss_proximal	tss_prox:b1	tss_prox:b1
X	150,361,367	C	T	false	tss_proximal	2,162	rs11094630	0.000027		0.099021	18.145	upstream_gene_variant	PLS_flank	ENSG00000013619	204	ENSG00000013619	54	54	ENSG00000013619	tss_proximal	ENSG00000013619	204	ENSG00000013619	54	54	ENSG00000013619	tss_proximal	tss_prox:b1	tss_prox:b1
X	150,450,277	C	T	false	distal	2,149	rs2266825	0.000109		0.095794	17.293	intron_variant	dELS	ENSG00000013619	4,664	ENSG00000013619	19,467	4,664	ENSG00000013619	dELS	ENSG00000013619	29,277	ENSG00000013619	59,047	29,277	ENSG00000013619	distal	NA	NA
X	150,460,334	G	T	false	distal	2,149	rs579854	0.000015		0.13509	31.73	intron_variant	dELS	ENSG00000013619	2,437	ENSG00000013619	9,410	2,437	ENSG00000013619	dELS	ENSG00000013619	39,334	ENSG00000013619	48,990	39,334	ENSG00000013619	distal	NA	NA
X	150,470,614	C	A	false	missense_variant	2,135	rs62641609	0.00018		0.000075	7.7805	missense_variant	missense_variant	ENSG00000013619	0	ENSG00000013619	518	0	ENSG00000013619	missense_variant	ENSG00000013619	49,614	ENSG00000013619	38,710	38,710	ENSG00000013619	missense_variant	NA	NA
X	150,471,087	T	C	false	missense_variant	2,135	rs61740566	0.00001		0.000234	12.208	missense_variant	missense_variant	ENSG00000013619	0	ENSG00000013619	991	0	ENSG00000013619	missense_variant	ENSG00000013619	50,087	ENSG00000013619	38,237	38,237	ENSG00000013619	missense_variant	NA	NA
X	150,568,509	C	T	false	tss_proximal	2,151	rs182709862	0.000015		0.040072	18.871	intron_variant	PLS	ENSG00000171100	33	ENSG00000171100	72	33	ENSG00000171100	tss_proximal	ENSG00000171100	85	ENSG00000171100	72	72	ENSG00000171100	tss_proximal	tss_prox:b0	tss_prox:b0
X	150,769,077	T	A	false	missense_variant	2,135	rs375281355	0.000035		0.000646	13.9	missense_variant	missense_variant	ENSG00000102181	0	ENSG00000102181	0	0	ENSG00000102181	missense_variant	ENSG00000102181	45,786	ENSG00000063601	33,677	33,677	ENSG00000063601	missense_variant	NA	NA
X	150,936,676	G	T	false	distal	2,147	rs4828786	0.000042		0.35795	8.449	intergenic_variant	dELS	ENSG00000102181	37,859	ENSG00000230153	15,737	15,737	ENSG00000230153	dELS	ENSG00000102181	37,859	ENSG00000222796	18,910	18,910	ENSG00000222796	distal	NA	NA
X	151,851,951	G	A	false	distal	2,153	rs73241833	0.001392		0.003399	4.413	intergenic_variant	CA-CTCF	ENSG00000147381	60,543	ENSG00000229967	52,479	52,479	ENSG00000229967	CA-CTCF	ENSG00000147381	60,543	ENSG00000229967	59,247	59,247	ENSG00000229967	distal	NA	NA
X	151,854,954	T	C	false	distal	2,153	rs141011758	0.000078		0.023141	12.847	intergenic_variant	CA-CTCF	ENSG00000147381	57,540	ENSG00000229967	49,476	49,476	ENSG00000229967	CA-CTCF	ENSG00000147381	57,540	ENSG00000229967	56,244	56,244	ENSG00000229967	distal	NA	NA
X	152,355,641	C	T	true	distal	2,160	rs145334807	0.98589	IGF1	0.021455	19.843	intron_variant	intron_variant	ENSG00000011677	8,789	ENSG00000207957	36,577	8,789	ENSG00000011677	intron_variant	ENSG00000011677	33,855	ENSG00000207957	36,657	33,855	ENSG00000011677	distal	NA	NA
X	152,356,397	A	T	false	distal	2,160	rs190545951	0.000142		0.008626	13.481	intron_variant	intron_variant	ENSG00000011677	8,033	ENSG00000207957	35,821	8,033	ENSG00000011677	intron_variant	ENSG00000011677	33,099	ENSG00000207957	35,901	33,099	ENSG00000011677	distal	NA	NA
X	152,701,287	G	T	false	missense_variant	2,137	rs7056365	0.000041		0.16821	86.432	missense_variant	missense_variant	ENSG00000221867	0	ENSG00000287394	2,586	0	ENSG00000221867	missense_variant	ENSG00000221867	2,492	ENSG00000287394	2,586	2,492	ENSG00000221867	missense_variant	NA	NA
X	153,347,343	G	A	false	missense_variant	2,134	rs61999320	0.000098		0.005198	6.9016	missense_variant	missense_variant	ENSG00000063587	0	ENSG00000063587	0	0	ENSG00000063587	missense_variant	ENSG00000063587	13,187	ENSG00000063587	3,065	3,065	ENSG00000063587	missense_variant	NA	NA
X	153,347,862	A	C	false	missense_variant	2,134	rs372578911	0.000166		0.000202	2.0687	missense_variant	missense_variant	ENSG00000063587	0	ENSG00000063587	0	0	ENSG00000063587	missense_variant	ENSG00000063587	13,706	ENSG00000063587	3,584	3,584	ENSG00000063587	missense_variant	NA	NA
X	153,597,180	A	G	false	distal	2,131	rs12010175	0.00062		0.05421	44.7	intron_variant	pELS	ENSG00000262919	992	ENSG00000262919	241	241	ENSG00000262919	pELS	ENSG00000262919	1,116	ENSG00000262919	1,850	1,116	ENSG00000262919	distal	NA	NA
X	153,670,877	G	T	false	tss_proximal	2,151	rs6643758	0.000665		0.043346	33.113	intron_variant	CA-H3K4me3_flank	ENSG00000130822	40	ENSG00000130822	40	40	ENSG00000130822	tss_proximal	ENSG00000130822	45	ENSG00000130822	2,072	45	ENSG00000130822	tss_proximal	tss_prox:b0	tss_prox:b0
X	153,700,869	G	A	false	3_prime_UTR_variant	2,133	rs438068	0.002503		0.005836	7.1119	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000185825	0	ENSG00000185825	0	0	ENSG00000185825	3_prime_UTR_variant	ENSG00000130821	7,406	ENSG00000185825	1,584	1,584	ENSG00000185825	3_prime_UTR_variant	NA	NA
X	153,774,047	G	C	false	missense_variant	2,137	rs6643791	0.000137		0.19254	66.729	missense_variant	missense_variant	ENSG00000198753	0	ENSG00000198753	881	0	ENSG00000198753	missense_variant	ENSG00000198753	711	ENSG00000198753	881	711	ENSG00000198753	missense_variant	NA	NA
X	153,776,089	T	C	false	missense_variant	2,137	rs5987155	0.000157		0.1927	66.542	missense_variant	missense_variant	ENSG00000198753	0	ENSG00000198753	0	0	ENSG00000198753	missense_variant	ENSG00000198753	112	ENSG00000198753	1,152	112	ENSG00000198753	missense_variant	NA	NA
X	153,982,271	C	T	false	missense_variant	2,137	rs2266890	0.001856		0.16114	174.84	missense_variant	missense_variant	ENSG00000177854	0	ENSG00000265176	1,093	0	ENSG00000177854	missense_variant	ENSG00000177854	1,664	ENSG00000283694	1,094	1,094	ENSG00000283694	missense_variant	NA	NA
X	153,982,294	A	G	false	missense_variant	2,137	rs7350355	0.006274		0.1646	176.86	missense_variant	missense_variant	ENSG00000177854	0	ENSG00000265176	1,116	0	ENSG00000177854	missense_variant	ENSG00000177854	1,687	ENSG00000283694	1,117	1,117	ENSG00000283694	missense_variant	NA	NA
X	154,348,761	G	A	false	3_prime_UTR_variant	2,133	rs55760624	0.000525		0.009138	15.817	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000196924	0	ENSG00000196924	0	0	ENSG00000196924	3_prime_UTR_variant	ENSG00000196924	4,407	ENSG00000196924	1,593	1,593	ENSG00000196924	3_prime_UTR_variant	NA	NA
X	154,460,010	C	T	false	distal	2,131	rs113289757	0.000985		0.060064	36.913	intron_variant	pELS	ENSG00000130827	146	ENSG00000130827	1,088	146	ENSG00000130827	pELS	ENSG00000130827	1,728	ENSG00000130827	1,725	1,725	ENSG00000130827	distal	NA	NA
X	154,834,156	T	G	false	tss_proximal	2,162	rs4898397	0.000816		0.098201	178.28	intron_variant	pELS_flank	ENSG00000203870	406	ENSG00000203870	406	406	ENSG00000203870	tss_proximal	ENSG00000203870	505	ENSG00000203870	505	505	ENSG00000203870	tss_proximal	tss_prox:b1	tss_prox:b1
X	155,238,549	G	C	false	distal	2,139	rs140467587	0.000089		0.029092	22.244	intron_variant	TF_flank	ENSG00000155959	222	ENSG00000155959	222	222	ENSG00000155959	TF_flank	ENSG00000155959	22,088	ENSG00000155959	11,404	11,404	ENSG00000155959	distal	NA	NA
X	155,648,173	A	G	false	distal	2,160	rs150116749	0.001413		0.022339	61.024	intron_variant	intron_variant	ENSG00000168939	8,693	ENSG00000185973	35,277	8,693	ENSG00000168939	intron_variant	ENSG00000185973	35,220	ENSG00000185973	35,277	35,220	ENSG00000185973	distal	NA	NA

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