Datasets:
query_name string | source_chrom string | source_start int64 | source_end int64 | region_label string | species string | alignment_name string | assembly string | taxonomy_id int64 | family string | clade string | phylogenetic_rank int64 | alignment_source string | t_chrom string | t_start int64 | t_end int64 | t_strand string | t_src_size int64 | pre_resize_t_start int64 | pre_resize_t_end int64 | fragment_count int64 | aligned_bases int64 | sequence string | augmentation string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
win_chrX_000234043 | chrX | 29,957,376 | 29,957,631 | background | Oryctolagus cuniculus | Oryctolagus_cuniculus | GCF_000003625.3 | 9,986 | Leporidae | mammals | 1 | zoonomia_cactus | CM000811.1 | 15,987,423 | 15,987,678 | + | 111,700,775 | 15,987,423 | 15,987,678 | 5 | 252 | TTTAGCTTTATGTTTGAAGTCAATTACATAAGCAGTTAATTCATATTCATATTAAGGGTGATGCAAAGTCAATCACAAAGGAAACTGCAGAGGGCAGAGTTGTTAAAAGGAAATATTACCTACAtagcttttagtttttaaaaaagtcaatgtgATAAAAACATTGATAGTAGAACTTAAAACAGTACTTCAGACATTCATCGTAGGAACTTCCATCCCAGTCATTGTCTGTGGGCTTGTATAGTGACTACTGTA | + |
win_chr14_000761609 | chr14 | 97,485,824 | 97,486,079 | background | Oryzias latipes | oryLat2 | MEDAKA1/oryLat2 | 8,090 | Adrianichthyidae | ray-finned_fish | 6 | ucsc_multiz100way | chr22 | 2,953,281 | 2,953,536 | - | 28,810,691 | 2,953,306 | 2,953,510 | 7 | 190 | CTCTCCGGAGGAAACGCGACCAGCCTCGGGGATGAGGAACGGCCTTAATGAAGTCAGACAAGCCGGAATACATGCATaagaaagattttaaatattgatACAATGTCAGTGTGCAGCAGCATAAACGGGTTACAGTGGATCAGTTAGCTCTTGATGGCCCTCGTCTAATACAGCAGCACAAGGGGGATGATTAGCCTCATCAGAGGCGATTGTGTATTCTGTGGGAGGCGCAAACGcacacactgtcacacaaac | - |
win_chrX_000761001 | chrX | 97,408,000 | 97,408,255 | background | Pithecia pithecia | Pithecia_pithecia | GCA_004026645.1 | 43,777 | Pitheciidae | mammals | 1 | zoonomia_cactus | tarseq_85 | 4,439,958 | 4,440,213 | - | 8,250,639 | 4,439,958 | 4,440,213 | 1 | 255 | AAAATATAGCTTTTCCAATTTCAAATTCTGTAAAATTGAAACCCACAGATCTCCTGAGAACACAGGGCAATAAAGCATAGGGTGCTTCATTAGAGGAAGTCTATAATTACAGATTACTGAGTAAATAATATGGATGCCATGGAATTACATGAGAGTTGATCACTTAGAAGAAAGTAGTATAGAATTACAAAATCAGGCACCAATACCTCAGAGATATAATTATATCAATTTTTGAACATTACGTGGTTCTTTTAA | - |
win_chr2_000450864 | chr2 | 57,710,464 | 57,710,719 | background | Panthera onca | Panthera_onca | GCA_004023805.1 | 9,690 | Felidae | mammals | 1 | zoonomia_cactus | PanOnc_flattened_line_12888 | 55,068 | 55,323 | + | 111,445 | 55,069 | 55,321 | 6 | 248 | CGCAATTATCCCCATGGCCGTATAGCCCAAGAAATTCATGTAACTCATGCAGGCTACGGCAGCTGACAATAGGACCTATTGCTGCACTGAGTTCTTCCAACATTAAAATAACAATCTAAAATCCCTAGGATAATTTCCCATAAATCGAATACACGAGTTCCTTTTTTATTGAGAAGTAATATCAGAAATTAAACCTTATAAGTATCCAAAGGCAATTACAAAATGAGGAGATTATGGTGGCAATATTGTAAATGG | - |
win_chr14_000397722 | chr14 | 50,908,288 | 50,908,543 | background | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007663.1 | 58,716,616 | 58,716,871 | + | 119,751,181 | 58,716,616 | 58,716,871 | 9 | 247 | TTTTTCTTGACACTTGACATAGGCTTCATAGTCTGCAAAGACTTTAAACCTTTTTTGTGTGAttggaaggggaagaaaacaataaaaagcttCGTTATCAGATGCATGCTAAGATaccatttaaaattctcttttgctTAATGTCAGGCATGGCTGGTTTACCAAattcatatttctgtttttaagaattttaaccAGTCCTCAGCCTTTTATGTTTTTTCCCACATGTAAGAATGCCACATTTGGATGCATCTG | + |
win_chr9_000229767 | chr9 | 29,410,048 | 29,410,303 | background | Aotus nancymaae | Aotus_nancymaae | GCA_000952055.2 | 37,293 | Aotidae | mammals | 1 | zoonomia_cactus | KZ200905.1 | 2,724,859 | 2,725,114 | + | 6,223,105 | 2,724,853 | 2,725,119 | 5 | 252 | ATTCAACTCTCATGAAAGTGACAGACCTCAATGACATTTTGCCTTGATAGAGTGCCTTCGTGTGTCAACTTTCAAAGGTGAAGTGTAGGGTCAGGAATTGATCCTTGGGGAAGCCAATATTTAAAGTTTCATAAAGGTCAAGCAGTTCACCTAAGGTTTTTGTCTTAATAGCATTTCTGAATCATTCTATGGTCAACTTGATTGATGATTGCACCATTGGAGACACCTAAAAAAATCTGCCAAAAAGCAGTCTAT | + |
win_chr11_000844176 | chr11 | 108,054,400 | 108,054,655 | background | Dinomys branickii | Dinomys_branickii | GCA_004027595.1 | 108,858 | Dinomyidae | mammals | 1 | zoonomia_cactus | DinBra_scaffold_1460 | 15,078 | 15,333 | + | 251,928 | 15,091 | 15,320 | 14 | 160 | GATCACTAATTCAGAAGTCAGTCTTTCCTGTCAAAAATAGTTATGTTTTTATAACATTTACTTATTACTTTATTGCTTAATGCTGTTACCTTTTAAATTTTTTTATGGAGAGTTTTGTCTTACATTGTTATATGTTCTTGTGATCATTGCCATCTTGTCCATAATTCCTCAGTATTTATTTATTTATTATACTTAAAATACTAATTAAGATCATAATTAAAGTAAAACTCTATTTTGTTTTTCAGTTAACCTTTG | + |
win_chr6_000356228 | chr6 | 45,597,056 | 45,597,311 | background | Cuniculus paca | Cuniculus_paca | GCA_004365215.1 | 108,852 | Cuniculidae | mammals | 1 | zoonomia_cactus | CunPac_flattened_line_34760 | 2,770 | 3,025 | + | 19,382 | 2,764 | 3,030 | 7 | 253 | ACCCCAGGCTGTGATGGAAAGGCTAGTCATATTTAAATGACCCCAAACATACAGGACTTTCATTCCTGGGGGCTACCCTCAAATTCTCTGCCAGCAGCCCCTGAACTCCCTTTCACCACACTGGAAACCATGTTCTCTAAAGAGAAACTATAACCATGGTAAATTATGTCTCTTCAGTGATATATCTTCCAGAATATTATAAGCTGGGTAGCTACATTTTTCATTGCCTGAGAGACGTCCACAGCCAGAGATCTA | + |
win_chr15_000289321 | chr15 | 37,032,960 | 37,033,215 | background | Anolis carolinensis | anoCar2 | AnoCar2.0/anoCar2 | 28,377 | Dactyloidae | reptiles | 3 | ucsc_multiz100way | chr1 | 31,908,210 | 31,908,465 | + | 263,920,458 | 31,908,231 | 31,908,443 | 15 | 204 | catttttttctaaaTGCATTAAATAGGATAGATTTGTTCAGCCATTTCATGCTGTAAACAtttttttATGTAAGTTTAAAAATGCCTTTCCTTCCAGGCAAAGCAGAGGTTAATGATTTTTGTCATATTGAAATTAACAATTGCTACAGTTGGCCTTTAGTATTTTATTTGTCCTTTTGAGGTATTCAGAATAGTTCACAATAGCTTGCAGTTGAGAACATATGTAGAGAGACCCCTGTGGGTTATGGAAAAAGT | + |
win_chr4_000313416 | chr4 | 40,117,120 | 40,117,375 | background | Myrmecophaga tridactyla | Myrmecophaga_tridactyla | GCA_004026745.1 | 71,006 | Myrmecophagidae | mammals | 1 | zoonomia_cactus | MyrTri_scaffold_65458 | 20,582 | 20,837 | + | 28,708 | 20,579 | 20,840 | 6 | 252 | tcagttcttgaaattttcaaccattcttctttaaaatgcctctgtctcatatactcctttctctttctggggcttagattaaacacctactagacgttgtcactctgtcctctgtgtctttgtctcttaacctcactttcatattttctgtctctttgcttctctgtgATCTGAAACCAGATAAGATGGAAGTAGGTAAATATGAAAGCCAGATTTTCCCAAGTGGCAAATGCTAATTTTAACACTGGGATCCAG | + |
win_chr7_000896439 | chr7 | 114,744,064 | 114,744,319 | background | Ochotona princeps | Ochotona_princeps | GCF_000292845.1 | 9,978 | Ochotonidae | mammals | 1 | zoonomia_cactus | JH802113.1 | 2,882,260 | 2,882,515 | + | 12,800,392 | 2,882,267 | 2,882,508 | 8 | 240 | TAGATTCTGCACTAACACACCTTAAACCCTAAATCATTTTTAGATACTAGTATAAAACCATTCATTTTTTATACTGaatttgtttcttgatttttttttttttgcctatctAAGTCATGTCAGAATCTCTAATGGAAATAATTTGAGCCATACTGAGAATGTCTGTATGTTAAAGGGATAATATAGAAATGGTTATTAAATCAGCACGTTAGCTGTTAGCCTTTGTATTTGCTTATCATACAGTGGAACTGCTGT | - |
win_chr14_000277849 | chr14 | 35,564,544 | 35,564,799 | background | Lyroderma lyra | Megaderma_lyra | GCA_004026885.1 | 3,371,112 | Megadermatidae | mammals | 1 | zoonomia_cactus | MegLyr_scaffold_1448 | 129,338 | 129,593 | + | 352,886 | 129,338 | 129,593 | 10 | 237 | TCTTATAATTTACATTTTGTGACTTTATGAATTGGCATATATGTATATAATATACACCTAATATTCTGAAATGTACAGCATTGGGGATATTCTAAAATTCAATGGCATCTTTAAAAAAAACTTTTTTCTTAGACTTAATATTCTTTCCTACCAAACCAATATTATTTGATTTCTACTAATCTGTTTAGATTTGACTTTTTCTTAAATGCCAAAATTGGGTTTCTGTTTAACTTTATCAGACAAATTACCCGAAGT | - |
win_chr3_001149790 | chr3 | 147,172,992 | 147,173,247 | background | Ailurus fulgens | Ailurus_fulgens | GCA_002007465.1 | 9,649 | Ailuridae | mammals | 1 | zoonomia_cactus | LNAC01000190.1 | 465,377 | 465,632 | + | 3,053,083 | 465,376 | 465,632 | 10 | 246 | TGACTGGACCTAAAATTAAATCTAttcaatttaaacattttacagTACAAAATACTACCATTTAagcaacactttttaaaaaataatggaaaataaatggtTGAGACACAATAAAGCTCTAAACAGatgcatgccttttttttttttgtatcagtgACTGAGTGTATGATTCAACTCATCCATATGAaattggggttttatttttatattttatttgatggtTCTCTTCATTActtttctctgactcatttaCTT | - |
win_chr3_000345219 | chr3 | 44,187,904 | 44,188,159 | background | Nannospalax galili | Nannospalax_galili | GCF_000622305.1 | 1,026,970 | Spalacidae | mammals | 1 | zoonomia_cactus | KL203808.1 | 4,257,950 | 4,258,205 | + | 5,154,714 | 4,257,938 | 4,258,216 | 14 | 237 | ACCTGCAAATCAGCAAGCACCACTGTATTCAGCTCCCAAATGGCAAGGGGGCAGATGCAAAGGCTCTCAGgaacaaaaaaacagcaaatgtttcccttctgtcttttttttttttttttccttctttttttttttaagagtgggAGGGGGAAAAAGTGACTCACAAAGATTTGCTGCCCTTGAAAACTGGTCTTTACCTTAAGTCACCTGACTCAATTCTTGCGCTGCCTGGCCTGTGCAGCTCTGCCTTGATGC | - |
win_chr11_001029375 | chr11 | 131,759,872 | 131,760,127 | background | Mesoplodon bidens | Mesoplodon_bidens | GCA_004027085.1 | 48,745 | Ziphiidae | mammals | 1 | zoonomia_cactus | MesBid_scaffold_43836 | 8,514 | 8,769 | + | 33,220 | 8,513 | 8,769 | 4 | 254 | TTTCTAATTAGCCTAATTAATTTTCTTCCCAACTTAATAAGACTGTCTCTGGTTCAGAAATAATTGGACTTCCCAAACACCATTTTCCCTCCCTCTGTTTCTCAGTGGTGAGTTGTGATCCAGCCTCCTTTAATAATTCAAAATTAGCTTCTGTTTTTCAGATGATGGGTTCATGTTCAGAGAGTTATTTAGTTTTTTTCATTAACACTCTGATGTCACACTCTCCCTTCTATGAAGAATACCTAAAAAAGCACT | - |
win_chr6_000077460 | chr6 | 9,914,752 | 9,915,007 | background | Giraffa tippelskirchi | Giraffa_tippelskirchi | GCA_001651235.1 | 439,328 | Giraffidae | mammals | 1 | zoonomia_cactus | LVKQ01S010565.1 | 107,542 | 107,797 | + | 398,441 | 107,582 | 107,756 | 2 | 173 | GAAAAACAGCAAATtgataccatttccttcttctcctttatAGAAAGGCTAACCTGTGAACATGGATCTGCTGCTCACACAGTATTCAAAAGCTGCTGCCCTGTTGGACAAATTATCTTTTTCTACTGCTTATTCTTACTTCCTTTCCACATCTTGTGGGTATTTGAGATATCAGTGATTTGAAAATCTAAATAGGGTAATAGTTGAAGTTTGCTAACAAGTACTAATTAATTGAGCCATATTCTTCTTCCCCTA | + |
win_chr3_001422719 | chr3 | 182,107,904 | 182,108,159 | background | Erinaceus europaeus | Erinaceus_europaeus | GCF_000296755.1 | 9,365 | Erinaceidae | mammals | 1 | zoonomia_cactus | JH835294.1 | 12,147,395 | 12,147,650 | + | 12,956,524 | 12,147,409 | 12,147,636 | 10 | 26 | tcacctggggctcattcatgaatatataatcagaattactttttttttcagagaactctgtctcctttgaattatgttcctttttaaagtctctgtcatacaatggtgccatttcttgggatcatttcttttgattttaggggcaaatgcacttggtatgaacaaagaacctatttgagtatgttcaagctaccccttcaacaaattttactcttaaaataagatactcgttttcttccacagtccccctcatct | - |
win_chr16_000273946 | chr16 | 35,064,960 | 35,065,215 | background | Tragulus javanicus | Tragulus_javanicus | GCA_004024965.1 | 9,849 | Tragulidae | mammals | 1 | zoonomia_cactus | TraJav_scaffold_787 | 279,378 | 279,633 | + | 334,556 | 279,377 | 279,633 | 18 | 226 | AGGCTGGGGCCTGGGGCACGGGTGCAGTTGTCCTCTGGGAGTCTGGGGGCCCATCCCCCCTCCCTCCAGAACTCCCAGAAAGGGACAGCTGCCTGGTCACCTGCAGGGGGCAGCGTGAGCCAGAGGCCCCAGCCAGCCACTCACTTGACCCAGGAGGCGGGCAGGGTGCTCAGTGCAGCCGGTGGACTGGGGGCGGCCACCTCATGGCCTGGGCCCGGGTCTGCGCCAGCTGTTGCTGGCAGCTGGCGGAAGCAG | + |
win_chr4_000326516 | chr4 | 41,793,920 | 41,794,175 | background | Chelonia mydas | cheMyd1 | CheMyd_1.0/cheMyd1 | 8,469 | Cheloniidae | reptiles | 3 | ucsc_multiz100way | KB576442 | 566,687 | 566,942 | + | 14,062,341 | 566,681 | 566,948 | 15 | 229 | TCTTGCCCTAATGTATCATCTCATTAGGCAATCCAATGTGAATGACAGAAAGTAATTCATTTAATtgtattaacattttttattatgaAACCACATTGGAATTGTGTATAATTTGATATATTAAGTTTTCTGTCATTTATTTTACTTAATACTATTTTctttatcatttatttgtatattcTCTCTAGTTTGTTTTGAACCAACTCAAAAATGCAATAGCtccaagtaaataaaaagaaaataaaggtacACTTT | + |
win_chr10_000828143 | chr10 | 106,002,176 | 106,002,431 | background | Equus caballus | Equus_caballus | GCF_000002305.2 | 9,796 | Equidae | mammals | 1 | zoonomia_cactus | CM000377.2 | 24,572,421 | 24,572,676 | - | 185,838,109 | 24,572,422 | 24,572,675 | 5 | 248 | ataattatattcctAAAAGATCAGGTGAATTGCTCAGTAATTTGATTAAAAGGCATTTTCTTCTAGGGATCAAAGGTCTAGACAGCTTGTCATTTTTTCCTGCTGCCCCATTCATTGTAGATCTAATGGAACATTACTCTTCATTGAAGGATATTGAGCGCAAATGGGTAATTCATCTTTGTGTGAAGCAAATTATGTTTCATGTCCTTCTGGAAAatttagtcattagggaaaattCTGCCTATATTTACTCTT | - |
win_chr9_000619105 | chr9 | 79,245,312 | 79,245,567 | background | Giraffa tippelskirchi | Giraffa_tippelskirchi | GCA_001651235.1 | 439,328 | Giraffidae | mammals | 1 | zoonomia_cactus | LVKQ01S005311.1 | 694,059 | 694,314 | - | 716,176 | 694,057 | 694,316 | 10 | 245 | CTGTAAAAGTCCTCAAGGCCACATGCTTTGGAACACCTTGCTAAAACAGGTAAAAGATGTGATGGGGACATACCATTCAACCACACTTACTCCTCTTACATTCATGTCACCTTTTTCAAAGGcagcttttctcttttcattcttagGTTGCTTGGGTACATGTCTGTGTTGTGACAATCAAGGTTGATTGTCTTGGATTAGTTATACTGTTGAGCTTAATTTTCCTTTTGAGCTGGTAACCATTCCAAACGCGCT | - |
win_chr12_000692114 | chr12 | 88,590,464 | 88,590,719 | background | Zalophus californianus | Zalophus_californianus | GCA_004024565.1 | 9,704 | Otariidae | mammals | 1 | zoonomia_cactus | ZalCal_flattened_line_9688 | 102,162 | 102,417 | + | 140,827 | 102,160 | 102,419 | 5 | 251 | AATTCCCACAGCTCACTTTACTCTTTTACTCATCACATTTTGAACAATATCCTTTTCTCCTTCACTGAGGATTCATGTATTACAAATTAATTTTCCCATTAATTATAAACCTAATTAAGGTTATAAAGAATGAACAGACACTCTgcttcaaagaggaagtgttatttgaaccaggatttgaatgatgaaaaggagatttcaggcagaaaatagagaaaaagctattgcatgctaaagggacaatgtgaacacaag | - |
win_chr3_000639928 | chr3 | 81,910,656 | 81,910,911 | background | Ochotona princeps | Ochotona_princeps | GCF_000292845.1 | 9,978 | Ochotonidae | mammals | 1 | zoonomia_cactus | JH802214.1 | 323,398 | 323,653 | - | 1,163,788 | 323,397 | 323,653 | 7 | 250 | ACAGTCCAGGTCTTTGCCTCCTGCAGTCGAAGGTAAACCTCGACATTTTCACCGGCAGTGGAGATTAGTGTGCCGTTTCATCAGGGCTTCCTGGTTGTAATCAGGTTGCAGAGTCACTGCTTCTGATCATTCAGAACTGTCGCTTCTCGGGACCTATAGGTgagggttattattatttttttaaagaaatgctcaTCATTTTCTTAGCgtgtttgtctctttctttgtctggTATGATATTTCACAGACTGTGGG | + |
win_chr2_001041959 | chr2 | 133,370,624 | 133,370,879 | background | Mungos mungo | Mungos_mungo | GCA_004023785.1 | 210,652 | Herpestidae | mammals | 1 | zoonomia_cactus | MunMun_flattened_line_4691 | 13,271 | 13,526 | + | 274,026 | 13,282 | 13,514 | 8 | 220 | GACACTCTTTGTCATATCCCGGAACCGCTAAGCAGGGCTCTCCTTGGAGAAGAGCTAACCAAAAGGAGTGTTACCCTTGAAGTCTCACCCAGGACATACTTGCATAAAACAAACTAAAGAATGAATCTATTTTGATGACCACGCATTTTTAAAAAAATGCTAAAAATACATTAGCCAAACTTTTTAAATTGAGTTCATTAACTTCTTAAAACTGCACACACATTAATAGGATTTTTATTATTAATTCTTCTAATT | - |
win_chr11_000637556 | chr11 | 81,607,040 | 81,607,295 | background | Platanista gangetica | Platanista_gangetica | GCA_054084255.1 | 118,798 | Platanistidae | mammals | 1 | zoonomia_cactus | PlaMin_flattened_line_2308 | 47,355 | 47,610 | + | 84,989 | 47,348 | 47,617 | 9 | 235 | CTGACAAATTTTACCTCAGAAATTACTTTACATTTCAGAGTCTTTGAGGAAATAAAATCTGGTAATGCTAATTAGTTACTATACAAACATTAATTAACCAATTCTCAAAAGACAGATGGGTTAAAAAAAAAAGTAGGCTACCCTATGCTAAATCAGCAATGGGAAAGTTCTAGATAAATAACTCAGTCTATTAAGGTCACATTCTATGTCAAAGAACTAGGAAGGATAGATTAAAAAGAAAAAATAAAAAGACCA | + |
win_chr10_000088010 | chr10 | 11,265,152 | 11,265,407 | background | Giraffa tippelskirchi | Giraffa_tippelskirchi | GCA_001651235.1 | 439,328 | Giraffidae | mammals | 1 | zoonomia_cactus | LVKQ01S011680.1 | 81,263 | 81,518 | - | 239,999 | 81,263 | 81,518 | 10 | 248 | ATTCAGTGGCCCCCACAGTGACTCCTATGCACCGAGCCATGTGCTGGTTGTTTAAATGTAGAGTTTTCTGCTTGGCTTCCTGGCCATAGAGGCACCCGTCTCATGTGATGGGTGCTAGAATTCCACTTCTGTGCACTCACTCTGAGATGACAAGCTTTGGCCCCTCAGTGTTTAGATCTGCTTCATTTGGAAATCTTTTTaagtagcaataataataatgttttgaGGCAATTGAGTGGAACACTAAATTATTCT | + |
win_chr6_000769189 | chr6 | 98,456,064 | 98,456,319 | background | Mesoplodon bidens | Mesoplodon_bidens | GCA_004027085.1 | 48,745 | Ziphiidae | mammals | 1 | zoonomia_cactus | MesBid_scaffold_31873 | 749 | 1,004 | - | 42,239 | 750 | 1,002 | 5 | 247 | CCAAATCAAGTCAAATTAAGAATGTATACACTGGTAAATTGAAGAAACAGATAAGCAGAAGCAGAAAAAAAAAATTGGAAGATTATACTTGTAATGTTTCATTAAGCAATTTCCATTAGGAAAGAAAAAAATCATTAATGCTAACCCATGTTTGAACTTAAAACACAGAATTCAAAGTGTTTCACACAGTGGATTTTTACATGTAACCTATGCGTTTAATAGTCACTCTTTGATACATGACAAGTATCATCTTGA | - |
win_chr4_000740039 | chr4 | 94,724,864 | 94,725,119 | background | Eschrichtius robustus | Eschrichtius_robustus | GCA_004363415.1 | 9,764 | Eschrichtiidae | mammals | 1 | zoonomia_cactus | EscRob_flattened_line_22896 | 33,316 | 33,571 | + | 68,128 | 33,316 | 33,571 | 4 | 253 | CTCTATTCATATTTTCATTTAAACAGAAATAAACCCTAACATCTCCATGGATGCTCTTTTTTTCCTGACTACATCCAGCATAAGTGATAAAACAGAAAAGATTTTCTCTCTTTCCTTCCAAATTCCAAGTGGTATTAAAAAAGAACAAGTTCCAATAAACATTGGTGGTGTGGCCAGGTTTGGTGGAGGCGTAATCATTGCATTTGTATTGCAATTTATTGCCTACCTTTAATTTGATCTAGCCACAGAATGTCA | - |
win_chr11_000306754 | chr11 | 39,264,384 | 39,264,639 | background | Oryctolagus cuniculus | Oryctolagus_cuniculus | GCF_000003625.3 | 9,986 | Leporidae | mammals | 1 | zoonomia_cactus | CM000790.1 | 178,608,913 | 178,609,168 | + | 194,850,757 | 178,608,910 | 178,609,171 | 3 | 255 | CAAGAAAACGGAATAGTTTTTATATGAAGAAAGTATTTCTTGATAAGACTAATGCTTTAGTTCATTTGCCATTGCAGTCGAAAGAAGGTCTTTAGAGTTCAGAACTATGCGCATAACCTAATGACTGTTATTTTCAGCATCATCACTCACAGTTTCTATGTAGCGGCTCAAAGAAGCAGGTGCAAACATTTTACTGTCAATAATTAACAATCAGTGAGAGAGTTCTTCAGGttccatttctttaaagaatttgAG | + |
win_chr12_000637480 | chr12 | 81,597,312 | 81,597,567 | background | Cryptoprocta ferox | Cryptoprocta_ferox | GCA_004023885.1 | 94,188 | Eupleridae | mammals | 1 | zoonomia_cactus | CryFer_flattened_line_9319 | 42,594 | 42,849 | + | 148,988 | 42,594 | 42,849 | 3 | 252 | TTTGAAAACTATGTCCTCTGGGCTTAGAAAAATGTTTTTTATTTCATACACATAGCTCAACAGAATTTCTGTTAGTTAATTTTGTTACATGTGCAGTATACAGGCAATCAATAATATAGGACGCTTACATACCATGTTTAGTATGCCTTACAATTTGAGATCAAGTAGAAACTCATTAAGATGGAAGCCTTTCTGTGTTATCAAAGAGTCAAAATAATTTATAATATAAGCGTGAGTAACAAAACTGTTACCTAC | - |
win_chr8_000606812 | chr8 | 77,671,808 | 77,672,063 | background | Odocoileus virginianus | Odocoileus_virginianus | GCA_002102435.1 | 9,874 | Cervidae | mammals | 1 | zoonomia_cactus | KZ100016.1 | 227,841 | 228,096 | + | 631,604 | 227,841 | 228,095 | 4 | 253 | GAAGAAAAATCCATCATGAAAAACTAACCTCTTTTTCCTTACGCATACATTCCAAGCAATCCTATAACCATGTCaacttaaatgaaataattagcGTAAGAGCTTCAACATGAGATACAACACGATGGCAAAATTAATCTTGGGTATTTAATGAAATACCATCTCTTTTTTAACCAAAAGTCTGACAACCTTGTGACAGTACAGATCTGTTCCACAGGCCATTTAATTAAGAACTATCATATAGAAACCTATTTT | - |
win_chr1_001144706 | chr1 | 146,522,240 | 146,522,495 | background | Tupaia tana | Tupaia_tana | GCA_004365275.1 | 70,687 | Tupaiidae | mammals | 1 | zoonomia_cactus | TupTan_flattened_line_1731793 | 305 | 560 | - | 669 | 297 | 567 | 4 | 255 | ATATATTCACTTAAGACATTATGCCTAATTATGCTATTCATCAATAAGGGAACCTGTTTCTCAAACCTTAAACCATCCTGATGCACCAGCGTGGGTCTGCACTCCATAAATATGTCAAGTGAACTCTGTAGGATTCTGAGCTAAGTATGCTTCATGATGTTTATAAAAATGGGTAGGATCCCATCCTGGTGCATTCTGGTACCCCCAGAATGGGTAGGTATTTCTGCTTGGTCCTATAGCTATCATAACAAATAA | - |
win_chr5_000420529 | chr5 | 53,827,584 | 53,827,839 | background | Vicugna pacos | Vicugna_pacos | GCA_000767525.1 | 30,538 | Camelidae | mammals | 1 | zoonomia_cactus | KN270144.1 | 7,507,556 | 7,507,811 | + | 26,844,571 | 7,507,559 | 7,507,808 | 6 | 243 | CCACAACGGGACTCTGCGATGATGTAGTTTATggagtctcatttttaaaaatctgacataCTTACAACAGAAGATGCTGTGGGAAAATAATTGGATTTACCCCAACTCCTCTGCTATTTATTGCCTTGGATGGCACTAAGGTTATATCAGAACACAGCCATAAGGGGAAGAGGCTTTGGAACAACTAAAacacattttccccccaaagtcAGTCTGTAGTTAACCCTTTGTAGAGTATAAGCAATGAATCTTGCA | + |
win_chrX_000837688 | chrX | 107,223,936 | 107,224,191 | background | Ceratotherium simum | Ceratotherium_simum | GCF_000283155.1 | 9,807 | Rhinocerotidae | mammals | 1 | zoonomia_cactus | JH767813.1 | 1,141,176 | 1,141,431 | + | 8,371,206 | 1,141,177 | 1,141,430 | 2 | 253 | TGATGTCTAGTATTGAGGATTGCTCTAAACTCTGGAGAAATTCTAGgccctaaataaataaaactgttgtgggcctttccatttctctcatgCAAATCACTACTAGTTTTAATAATAAAGGTATACTGAATGAAGAATCTTGGAAACCAAATCACACCTCAGAATAGGAATATAGACTTTATCTAAAACTCAACAGATATATAAAGaagatttggtctctccctctaatgaatttatagttgattggggagacaa | + |
win_chr5_000736568 | chr5 | 94,280,576 | 94,280,831 | background | Scalopus aquaticus | Scalopus_aquaticus | GCA_004024925.1 | 71,119 | Talpidae | mammals | 1 | zoonomia_cactus | ScaAqu_scaffold_3117 | 115,314 | 115,569 | - | 193,099 | 115,317 | 115,565 | 9 | 239 | ACAATAAAGAGTGTGTGTCTTTTGCTATAATTTCTTCATGTGTAACATCTCAGGgcttctacttctgatgcccaatagctgttccattaacacccccactgccagtgccactgtaacatttcaggtaatgaggtaaggggcacacttgagttctttatgtgccaagatgagaaaaattaattttcaatgctaaaaagatgagactgctggtgcagacggtcactaaccaccaccagctgctccatagatttggag | + |
win_chr4_001417854 | chr4 | 181,485,184 | 181,485,439 | background | Heterohyrax brucei | Heterohyrax_brucei | GCA_004026845.1 | 77,598 | Procaviidae | mammals | 1 | zoonomia_cactus | HetBruBak_scaffold_18227 | 26,431 | 26,686 | + | 92,197 | 26,440 | 26,676 | 6 | 233 | ATAAATTAGACAAGTAATGAAGAAGGTGCCAGCAAGAATCTCCTTTCCTTTGGCATTAATCTCTCAGTTTTATACAGAAACATTATTATTTCTGGTGTGGAGAATACAAGTGTGTACTAAGAGAGATGAGTTCTAGACCTGACAGATTACAGACAGGTTAAAATCCAGTTTAAAGGTTTCTTCATTTCAGTGCCTTATTAGTAAGACATACTTACTAAAATTGAATAGTTCCTGTGATTTTATTTCAACTGAGAT | - |
win_chrX_000198441 | chrX | 25,400,320 | 25,400,575 | background | Bos taurus | Bos_taurus | GCF_000003205.7 | 9,913 | Bovidae | mammals | 1 | zoonomia_cactus | CM000206.6 | 126,243,019 | 126,243,274 | - | 150,266,161 | 126,243,019 | 126,243,274 | 1 | 255 | CATGagataaaaataatcagaaaaacgTCCTTAGGTATCGAGAATTTATTAGAATCAGAGCACTTACTAATTCAGAGCAAATGAGATCTATAGATCGTTAATTGCAGCTTGGTGTCTTTTATAAGAATGCCTCATGTAGTGAGCACATTGTCCCTTCACTAAATGAGTAGTGATTATCTGGGAGATTACTGTGATTTATAagctcattttcttcattttactttacatgtgccagacactgactCATTcaataga | + |
win_chr9_000113455 | chr9 | 14,522,112 | 14,522,367 | background | Solenodon paradoxus | Solenodon_paradoxus | GCA_004363575.1 | 79,805 | Solenodontidae | mammals | 1 | zoonomia_cactus | SolPar_flattened_line_2286 | 293,298 | 293,553 | - | 453,397 | 293,298 | 293,553 | 1 | 255 | GTTAATTAATTTATGATGGCGAAACAATAATTACAAGCTACTGTTTGTCAGGAAGATCACTTGTGATGAAGTCAAAGGTTCACATCTGTGTGCATATCCCAAGGACCAATGCATCAAATTAGCTCTGCTGGCCTTTTTCCCATTAAAACCTAACATGTGTCATCAATATTCTGGCATTCGTGTGTGTAAACTAATTGATTGAACATTCATGCTACATAAACATGCGGTTCGTATTATGTGGGGTACCATTTATAA | + |
win_chr8_000716815 | chr8 | 91,752,192 | 91,752,447 | background | Ailurus fulgens | Ailurus_fulgens | GCA_002007465.1 | 9,649 | Ailuridae | mammals | 1 | zoonomia_cactus | LNAC01000432.1 | 1,798,080 | 1,798,335 | + | 2,199,730 | 1,798,080 | 1,798,335 | 3 | 254 | TTATGGGCTGAAAATAAACTTAGAGtacttcattatttcttcttaataaCAAAGCCCTTTTGCAAACAAGCAGGCCGTGAGCAGAACTTAAGATGAGTAATCACATCCAAACAGTTTAGATGATCAATCATCTTATGTAtgcataaaatattaaacataatgaACATGTTAGGGAGCTATCGATCTATTCCAGTCCAAGTCACAACAAAAAGGAAAGGTTTCTTAGTGATTGAGAGCATTGATTAGACCCTGGGG | + |
win_chr20_000339372 | chr20 | 43,439,488 | 43,439,743 | background | Scalopus aquaticus | Scalopus_aquaticus | GCA_004024925.1 | 71,119 | Talpidae | mammals | 1 | zoonomia_cactus | ScaAqu_scaffold_5664 | 55,020 | 55,275 | - | 149,763 | 55,027 | 55,267 | 10 | 236 | GGATGGGGGGTAAATGCCAGTCAGCCAGGAGGCCTGCATCTGAAATGGGCTCAGCTGTGTTTCTGTAATCTCTGCACTTTGAGGGGAAAAATAATTGTCAGATCCTTTCCTGGCCATTAATTCCTTTCAGCCGACACTGAGCCCCGGGGGCAAAAACGGATTGTCTGCAGTTATGGGTGGCCTGGCCCTGAATTCAGAACAGGAAAGGGAGTCTTTCTTTTCATAGACAACCACTCCTCCCtccctaggtgtccc | + |
win_chrX_000259093 | chrX | 33,163,776 | 33,164,031 | background | Mus musculus | Mus_musculus | GCF_000001635.26 | 10,090 | Muridae | mammals | 1 | zoonomia_cactus | chrX | 83,014,145 | 83,014,400 | - | 171,031,299 | 83,014,154 | 83,014,390 | 14 | 226 | aaatgaaagcatttgCAACTTGTAAAACACAAAGTGTGACTCTGCCCACTCCTGTTTTCCAAGTTAGAAGTTAGAAAGTTGTCATATTCTCCTAATCCTCTGCTACCCACAGGAAATCTGCTGCCaaatgtgagttcctttgtgttatactttatatattaataatttttttcacttGCCAAATTAAACCCATGTTTCCCCTCATTTGATTTCTAATAAAGACTGTAGCTACTTTTCCTGCCTATGTTTATATTA | + |
win_chr13_000564411 | chr13 | 72,244,480 | 72,244,735 | background | Cricetomys gambianus | Cricetomys_gambianus | GCA_004027575.1 | 10,085 | Nesomyidae | mammals | 1 | zoonomia_cactus | CriGam_scaffold_9145 | 88,702 | 88,957 | - | 125,223 | 88,700 | 88,958 | 4 | 255 | CCTGCATCCTCTGTGGGAAATTTGGAAGTCGGCTTTGTAGATATGAGAAATTCATGAGGCTGAAGTGATTTATGCCCTTCCTCCAAGAATACAGGGATTGGGGTAACAGAGAACCTTCTTATTACTCATATAACTCACTGGCAAGGTCAGTGGCCAATAAAGACATCACTATCGGTGATTAATTGTGGATGGGCACCACCCCTAACTTTCCTTTGATCTCAGAGACCCAGATAAATGTGATGATGGGGTCTTTAG | - |
win_chr10_000825412 | chr10 | 105,652,608 | 105,652,863 | background | Dasyprocta punctata | Dasyprocta_punctata | GCA_004363535.1 | 34,846 | Dasyproctidae | mammals | 1 | zoonomia_cactus | DasPun_flattened_line_65047 | 10,575 | 10,830 | + | 21,385 | 10,580 | 10,825 | 4 | 245 | TGATTTGGCTGAGTGGCATCTGGTTGAATAGGTTTGGTTGTGAATATTTTATCAGACTTTTGACAAGATGTCCATCTCACCATGGAACGAGGTGAGATCTCAAATCATTTTAGATGGTTTTGCTTCTTAATTAGACAGTCAGTACACTGCCCATTGGAAGAACTGGCTTCTACTTGGCTGCTGAGGTGACTGAGATCATGGAGAAGCTGAATCTGATCCAATTAATTCTCTTGATAGTTTACTCTCCCTTTGGTT | + |
win_chr2_001602776 | chr2 | 205,155,200 | 205,155,455 | background | Muscardinus avellanarius | Muscardinus_avellanarius | GCA_004027005.1 | 39,082 | Gliridae | mammals | 1 | zoonomia_cactus | MusAve_scaffold_17196 | 70,908 | 71,163 | + | 73,392 | 70,907 | 71,163 | 9 | 248 | GACTATGGCTCCCCTTAGGAGGGACAGTCAGTTTTAGAATACTGCAAGGTGTTCAGGGCTGCCAGTCGTCTTCTCTAAGCATGGGGGCTGTGCTGTGACAGCTGGAGATGTTCTCAGCTGCCTGAAAGAATTTGCACAGACCTTCTCAGAGCTGTGCATTTGCCAAAACATATATTGACATGATAAACCACAATGGATTTAAGTGTTTAAAGTCAAAAATACACTTTTAAAAATAAGTACTTAAGTTGGCCAGTT | + |
win_chrX_001004433 | chrX | 128,567,296 | 128,567,551 | background | Oryctolagus cuniculus | Oryctolagus_cuniculus | GCF_000003625.3 | 9,986 | Leporidae | mammals | 1 | zoonomia_cactus | CM000811.1 | 102,978,823 | 102,979,078 | + | 111,700,775 | 102,978,819 | 102,979,081 | 4 | 247 | GTTCCATATTACCAAGACTGAGGTTTCACTGAATAATTGATGAGAAGAGAAAACTATAAGCTACCTTGCAGCCAGTCATTATGGTTGTGATACTACCTTTGCGGAAAGTAACTACAGTGTTAgccaacaaaacctaaatgataAAAGAGGCAATTTCTCAAAATAACTGTCCATAGGTCCAATAATATTTAAGGATCAAAGCACTGGCCTTTCAGCTTTGACTATTACAGTAGCTTTTAGTTATACAAatgtggg | + |
win_chr12_000124666 | chr12 | 15,957,120 | 15,957,375 | background | Chrysemys picta bellii | chrPic2 | v3.0.3/chrPic2 | 8,478 | Emydidae | reptiles | 3 | ucsc_multiz100way | chrUn_KK088226v1 | 6,810,852 | 6,811,107 | + | 7,803,635 | 6,810,849 | 6,811,109 | 13 | 248 | CATGTAAACCTAAAAGATTGCAGTTGTCCATGtcttattttaataatttgtatttgaTGATGATGAGTTGGACTAAGATGATGCATTTATCCAAAAAAGTTAATAACCTGATAACTCATGAGTGGCCAAACTACAAATGAATTTCAGGCATCTTTATTCATGAGTGGATTAAATTGTATATTACTATCCAAGCATATTTATTCTGTTTCCCAGACAGATCTCTCTACAAAgtctaattttttaatttttaaagct | + |
win_chr15_000478065 | chr15 | 61,192,192 | 61,192,447 | background | Eschrichtius robustus | Eschrichtius_robustus | GCA_004363415.1 | 9,764 | Eschrichtiidae | mammals | 1 | zoonomia_cactus | EscRob_flattened_line_222 | 282,655 | 282,910 | + | 423,845 | 282,654 | 282,911 | 5 | 251 | GACCGTTGGCCCTTAATTTCCCTCATTTAGGCAGGCTGCTCTTCACCATACAATAGTCATCCTGTAAATTAATGTGTTCTATTTCAAAAGTGACATGTTGTACTGGCTTGTGCTTCAAAGCAAATTACTCTGGATTGCCGGTTTCCCAACCAGGCTACAAGGGTTCCAGCCCACTCGACCCAGGGTCCAAGAGAAAATCTAAATGGCAGGGAAAGGATGACAGATCTACCATTCCTACCAGGGGCCTACAGATAC | + |
win_chr10_000592979 | chr10 | 75,901,184 | 75,901,439 | background | Scalopus aquaticus | Scalopus_aquaticus | GCA_004024925.1 | 71,119 | Talpidae | mammals | 1 | zoonomia_cactus | ScaAqu_scaffold_1108 | 151,070 | 151,325 | - | 276,267 | 151,070 | 151,324 | 10 | 243 | GCATGCAGCCTGTTCCCTAGCACCTGTGGTCAGTGGAAGTGAGACAGATTTACACTCTGGCTTGTTCAAACTCAATTCAGATTTCCTTGTCTTTTTCAGATTACACTCATGCCTTAATGACACATTTTTTTTTTTTTTGTAGAAAGCTAATTACATTGGTTTCTCTAAGAGGCATCACTTTAAACAATCCATCCTGACTGTGAAAACAAATACATGCTTGACTTATTTCATTTATTTTCCCCAAAACCTAAATTA | + |
win_chr1_000751634 | chr1 | 96,209,024 | 96,209,279 | background | Myrmecophaga tridactyla | Myrmecophaga_tridactyla | GCA_004026745.1 | 71,006 | Myrmecophagidae | mammals | 1 | zoonomia_cactus | MyrTri_scaffold_1443 | 53,914 | 54,169 | + | 182,502 | 53,920 | 54,162 | 5 | 242 | AGAATAAACCTTGGAGATTCAGAGTTAGAAGAGCTTGTAAATTAATCTCCTAAACACACCTTGAGCATGCTCAGAGAGTCCACTCAGTCATAAAACTTGACCAACTGAACCTGCAAAGTTTTAATAGGAATGGATTTGATGAAAAAAATATTAAATCTTTTCCCATTTTAATATTCCCCAAAACTTATGGCTGCTTTTAATCTCTGCTGTCTCTAATGCTGTTTGTTCTTGAACCCTTCCTTTTAATCAGAAGGC | + |
win_chrX_000818296 | chrX | 104,741,760 | 104,742,015 | background | Choloepus hoffmanni | Choloepus_hoffmanni | GCA_000164785.2 | 9,358 | Megalonychidae | mammals | 1 | zoonomia_cactus | KN194066.1 | 78,576 | 78,831 | - | 426,170 | 78,578 | 78,828 | 6 | 247 | GATCTGTATTTAGTGATAGCAAGAATGAAAAACCCTgatcaaaatgagaaaattaccTGTTACTGTTTCTTACCAATCGACTCAGTGGATCAAAATAGCTGTGCAAAATGTCATGAATTACCGGTATACAGGAATCTCACTATTTATCTGTCgtattatttcattatataaatgtgatttttttctaaactgaatttcaaaattgATGCTCCTAACCATAATACTTGAAGGTTACTCTCATAGCTGAATAATTTA | - |
win_chr2_001145856 | chr2 | 146,669,440 | 146,669,695 | background | Geosciurus inauris | Xerus_inauris | GCA_004024805.1 | 3,371,099 | Sciuridae | mammals | 1 | zoonomia_cactus | XerIna_scaffold_33559 | 7,297 | 7,552 | - | 42,062 | 7,295 | 7,553 | 5 | 254 | AATGTTACCAAAAGGGCAAGTGCAGTAAATGGCTTTATGAAGGAAAGTCGGCCAGCTTTTCATAATGCAAATTGGGAATCTTGTTAAAATATGATTGTGCATAGGACCTTTACAGAATGAAAACAACTCTTCTTCAGAACCCCATCTTGCCTTTGCTTAAATTTTATTAGATCAGATGAACAATCGTAGCTCTTTCATTAGTCTCTAACCTGTCCTGACTCTCCCCTGTGGAGGCTGCAGGGCCTGAGCCAGTGC | + |
win_chr1_000622995 | chr1 | 79,743,232 | 79,743,487 | background | Muscardinus avellanarius | Muscardinus_avellanarius | GCA_004027005.1 | 39,082 | Gliridae | mammals | 1 | zoonomia_cactus | MusAve_scaffold_40678 | 24,450 | 24,705 | - | 38,364 | 24,446 | 24,708 | 10 | 243 | AATTGAGTGTATTCCACAGCCTAATATAAGCCAACAGAGAAGGTGATGATGAATATTATTTAAAACAAAAAACTTGAAAATATCTTTTGAAAGTAAGGATATAACATTTGTGAATTACTTTATTTAGACCTTATTTGGGGTTTAATATTACATAGTATTATAAGAAACAGAGATGTTTCTTCAAAAATATTTATTATCTTATTAAGGTAAACTGTCTTCCCTGCTGGTGGACAATATTTTATAGAAAAAATACAA | - |
win_chrX_001083929 | chrX | 138,742,784 | 138,743,039 | background | Enhydra lutris | Enhydra_lutris | GCF_002288905.1 | 34,882 | Mustelidae | mammals | 1 | zoonomia_cactus | KZ291812.1 | 8,676,992 | 8,677,247 | - | 9,371,767 | 8,676,997 | 8,677,242 | 6 | 243 | ggtactttttaataaaaaactatCTTTCCTTACCCGCATGAATTCTTCCTTCCCATAACTTCTTCCCAACGTGAGGGACCAGGGCAGCCAACACGCAGCAAATTGCTCTTATTAATTAGCCAAGAGGCTGTGCTGGCACAGCAAATAAACAATGTACTACAAATCTGTTTATATCAGCTTCTccagacattttaaaacaattaaactGTCAAGGGGACCTGGAGACAGAGCTTTGCATTTTAATGGGAAATGATT | - |
win_chr2_001595578 | chr2 | 204,233,856 | 204,234,111 | background | Vicugna pacos | Vicugna_pacos | GCA_000767525.1 | 30,538 | Camelidae | mammals | 1 | zoonomia_cactus | KN270134.1 | 467,769 | 468,024 | + | 3,334,179 | 467,776 | 468,017 | 10 | 226 | ATATTCTTCCACATCTAAATATGCAAAAGCCCACACACAATACATTTCCCCCCACAATTTCACAAAGGCTACTTACTGTAGACCGTATTTTAAGGTGAAATAAAATTCCTTCCTGAAATCTAACAATGCTCTGGTGGGTAGGCATATTTTTATGCCCATATGATTGGAGTTAAGTTTCATCGTATAAAAATTTGGGAAGTTCAGTTGCTGGGAATTGAAAATTGATCTACTGTGTAAAATGTGCAGAATGGGAGT | - |
win_chr9_000613905 | chr9 | 78,579,712 | 78,579,967 | background | Eschrichtius robustus | Eschrichtius_robustus | GCA_004363415.1 | 9,764 | Eschrichtiidae | mammals | 1 | zoonomia_cactus | EscRob_flattened_line_10352 | 18,861 | 19,116 | - | 123,577 | 18,859 | 19,118 | 3 | 255 | GGAAGTTATGACAAGAAAGAGAAAGAAACTAATATTGGTTATGAAACGACTCAAGGAAAATCAGTGCTGAATTATTTATGTCTAAATTTCAATGTTCCCTTGCTGGTTTTAGCTGTCAGGAAGTCTAAAAAGAAAGTTATAAAATTTCCTCCCTCCAGCCAAGAGGAATGCCTCTCTGAAAAAGTGGCCCTTGGAGATGAAGCCCCAGAAGTCTCCAAGGTATGGTGCAGAGCTCAGGGTTAGGTGAGGTGGAAG | - |
win_chr1_001494294 | chr1 | 191,269,504 | 191,269,759 | background | Erinaceus europaeus | Erinaceus_europaeus | GCF_000296755.1 | 9,365 | Erinaceidae | mammals | 1 | zoonomia_cactus | JH835683.1 | 1,296,247 | 1,296,502 | + | 2,130,165 | 1,296,245 | 1,296,504 | 6 | 252 | AGATATGTGTTGTCTCCAGGGAACACATtgtgaaaaaataaactaaaccagtttttttatttctttacaaaaCTTGGTATtgtccttcaccttctgcattctTTGAAagtttctctctcatttaatctATTTTATGGCACCGCAGTGCCCTCGAGGAGTCATCCACTGTCCTATTTATCTTCTCTATGGAGGATTATTTTAAAGTCTAACTGTTTAATAGTAACTAAATATAGCAGAGTGCATGTATTAAGACAC | + |
win_chr6_000904781 | chr6 | 115,811,840 | 115,812,095 | background | Platanista gangetica | Platanista_gangetica | GCA_054084255.1 | 118,798 | Platanistidae | mammals | 1 | zoonomia_cactus | PlaMin_flattened_line_62051 | 5,386 | 5,641 | + | 24,424 | 5,385 | 5,641 | 4 | 254 | CACGTTTATAGCGCAGCTCGACCCCCATCTATGCCAGCGCATGTCAACCTTTCTGAGGAGGATGTTCTAATTCCCTCATGAAGGCCATTAGGAAGAATTAAAAACGAAGCTCCCTGTTTTCTGGGTAAATCAATTTCTCATTGCCTAGAAATCTTTCTGGCCAGAGCACATGACCTTTAGAGACAATAAGGATCCTAGAACTATACTTAAATAACTTTATTTTCTAAAGCGTTAGAGGGAAACAAAAGGAAAATT | + |
win_chr9_000190970 | chr9 | 24,444,032 | 24,444,287 | background | Ceratotherium simum | Ceratotherium_simum | GCF_000283155.1 | 9,807 | Rhinocerotidae | mammals | 1 | zoonomia_cactus | JH767747.1 | 26,892,719 | 26,892,974 | - | 29,395,486 | 26,892,718 | 26,892,974 | 3 | 254 | AAACTCGTAGAAGCAGTTAAACCACATCTTATTAACATTGAAACATACAATCAAAAGTCGTTCTATTACACAGTTTCTTTATTCTAATAGAGAAGCTATCAGAACATAGATAAAGAGAATTAGCTGGCTTGTAATTAGACTTCTGGGACACTAAAGGATAACTGTTTCAGTTTTAATAGCCTATAGTGAATGCATTAAATATACTGTATTACAttggcaaaatgaaaaaagtggcATTAGCATGCACATAAGCAG | - |
win_chr5_001223790 | chr5 | 156,644,992 | 156,645,247 | background | Crocidura indochinensis | Crocidura_indochinensis | GCA_004027635.1 | 876,679 | Soricidae | mammals | 1 | zoonomia_cactus | CroInd_scaffold_1136668 | 655 | 910 | - | 917 | 655 | 909 | 2 | 254 | CCTGTACCTAAAGGTTCCTCCTCTTGACACAATATAATTTACTGGCAATAAATGTTCATAAACAGTTTGAGTGAAAAATCCATAAAGCCATTCCTGCCTTATCTGAAGTCCCATTTAATGTCCCTCAAAAATGATTTCATCAATGTGTTTCCATTAGCTGGTTGTCTTCCCAGTCACTTAATCCCACCCCACCTGTCAGGAGCTGATAAAACATGGGATTGGTCTAGCTGTTGTGTTTAGTATCCCTGTAAAAAA | - |
win_chr22_000338983 | chr22 | 43,389,696 | 43,389,951 | background | Cryptoprocta ferox | Cryptoprocta_ferox | GCA_004023885.1 | 94,188 | Eupleridae | mammals | 1 | zoonomia_cactus | CryFer_flattened_line_18388 | 46,810 | 47,065 | - | 73,709 | 46,809 | 47,066 | 6 | 251 | CCTTCTCCTCCCTCCCTCTTCCCCGCCTTGTCAGGAATCTGTAAGAAGAATGGAGAGCGGATGATAATTGCCCCCCGCGGAACTCACCTGCCATGAAAGGGTGTTAAATAACACGTAATTTACATGTCTTCCCTGTAGGAAATTATAGAATCAGAGCTTTCAAATTAGCAATAGATTTTTCTAATTGAATCTATTTCCCGTATGGCAGGTGAAGTGAGAAATGATCAGGTAGTTCAGTTTCCCCTGCAAATGGAC | + |
win_chr4_001424310 | chr4 | 182,311,552 | 182,311,807 | background | Ailurus fulgens | Ailurus_fulgens | GCA_002007465.1 | 9,649 | Ailuridae | mammals | 1 | zoonomia_cactus | LNAC01000130.1 | 80,450 | 80,705 | - | 3,905,155 | 80,457 | 80,697 | 4 | 237 | cttccagactccgtgaccttggacaagtcaattaatctctctgggtcttcgttctctcatatggaaatacctagcaagctggttgggaggattaagggaggtcatatatgtaaagcacctggcctatcttaagcactaaaataaataatcaagattgaaattaataattaatcaAGGAGCTTTTATGTCCACTCTTCAAAAAAGGAATATGCTCAGCACTTAGGGAAATAATACCAGCTCTTCATTTAAGAAGCT | + |
win_chr10_000224070 | chr10 | 28,680,832 | 28,681,087 | background | Rhinolophus sinicus | Rhinolophus_sinicus | GCA_001888835.1 | 89,399 | Rhinolophidae | mammals | 1 | zoonomia_cactus | LVEH01000082.1 | 2,724,577 | 2,724,832 | - | 3,702,070 | 2,724,569 | 2,724,839 | 12 | 244 | GTAGAATACAATTCTACAAATGTATTAGTCCTAACAGcagaaaataaaagttcaatTTAGGTTTCTGATAagttagtaattaaaaataatacttttgtttttgaaagaaaataatcacaatCACTTCTCCTACCATAAGACAAATTAccttatttactcattttaatcCTACATGACCATACAACATGAAAATGCTAGGCTTTTTGATTTTGTCAGTATAAATATTTGATCGGAACTACTGAATTGTTTACTACC | - |
win_chr2_000496699 | chr2 | 63,577,344 | 63,577,599 | background | Carlito syrichta | Carlito_syrichta | GCF_000164805.1 | 1,868,482 | Tarsiidae | mammals | 1 | zoonomia_cactus | NW_007248425.1 | 208,187 | 208,442 | + | 312,950 | 208,187 | 208,441 | 5 | 249 | ttgtactttaaaaatgtgtttccccttataaaataaaatttatcatctgaGAAAGTCTGCTTAAAGGAAATGAGATAGTTTGTGTTTTCTAGAAAAGAACTGAAAGGGCATCtcatctctctcttcccttcctttatCCCATTTCAAGCAAGACCCAGatattaaatgttttatgtatGACAGGAAAAATAACATATCATTAAAGGATGCAAGTCTGCAAAATCTAACAGTCACGTAAGCCTGTGAGATTCCCAA | + |
win_chr4_001143584 | chr4 | 146,378,624 | 146,378,879 | background | Odocoileus virginianus | Odocoileus_virginianus | GCA_002102435.1 | 9,874 | Cervidae | mammals | 1 | zoonomia_cactus | KZ101282.1 | 207,086 | 207,341 | + | 1,509,709 | 207,087 | 207,339 | 6 | 247 | CTGTTTTCTAAAGATTTCCAGGAGGTAAGAGTAAAATAAATGGGGCTTAGGCAACTCTAGAGAATATAGATTAAGACAGAGAAAATGCCAAACCAAATAAGCCTGAAGTCATTTAACAAAGCAGCGCCTGTTGATTGATTTATATTTGGTTTTGTAATGGGATTGCACACAGACTCCACTCGGCCCAACTTCCTGTTCTTCACATTTGAGCCCCATCCTTAGCAACTGCAAGCCCAATGGGGAGCCTGCTGATAG | + |
win_chr3_000291526 | chr3 | 37,315,200 | 37,315,455 | background | Monodon monoceros | Monodon_monoceros | GCA_004026685.1 | 40,151 | Monodontidae | mammals | 1 | zoonomia_cactus | MonMon_M_scaffold_19028 | 19,477 | 19,732 | - | 77,083 | 19,479 | 19,730 | 7 | 245 | TTGGGCTGTACTCAAGGCTTTTTCAAGTTCCTCAAAAGCTACAATGAAAACAGCAGAAAACAAGTATCTCAAGAAATACTATCATTGAGCTAAAGTGTTTTACATTCAATTTATGGGAACTAAGAGCAGCAGTAGCAGAAGAGGTTAAAAAACTCATCACTGTTTTAAGCCAAGAGATATTTGAGTAGTTAAAAGCCACAGAAATGTCCAGTCACTAAAAGCAATTTGTCATTGAGTTCTGGATTCAGATCTTAA | - |
win_chr2_001275497 | chr2 | 163,263,488 | 163,263,743 | background | Catagonus wagneri | Catagonus_wagneri | GCA_004024745.1 | 51,154 | Tayassuidae | mammals | 1 | zoonomia_cactus | CatWag_scaffold_7364 | 133,816 | 134,071 | + | 145,708 | 133,811 | 134,076 | 4 | 255 | tttagtgactttcctttttctattcagtgtgataggattttttttttttttttttctgggagaagtagcctgtggcacttggctgaagagatgagacttcaatgagatataggagacaaagagtgacaaattaaaatgacaaggttgtcttataagattgtgatccagtgaaatgaagtatttctggcccagtcaatgtagacagaataatgctatgtggtaATAGATTGCAAGACCTGGGCAGCCTGTATATGT | - |
win_chr1_001124603 | chr1 | 143,949,056 | 143,949,311 | background | Hippopotamus amphibius | Hippopotamus_amphibius | GCA_004027065.1 | 9,833 | Hippopotamidae | mammals | 1 | zoonomia_cactus | HipAmp_scaffold_3428 | 54,376 | 54,631 | + | 197,930 | 54,376 | 54,631 | 2 | 253 | TGAGGGCTTGTTCTTCAGGATACTGACAGCTTGATTTCTCTGGGTAACATCATGCAAAGGAAATTAGCTCAGTATGTCTTCTACTGAATTCCATCTGTAGCTCAATGTTTTAACGTATTTGTGAACAAGGCTACAGAGCAATTTTGATAAGACAAGGCAATGTTCCAGTCTCTGAGAATATTTTTCCCCAAAAAACATTTTTTAAAATACCACTGAACAGCCTGGAAATCCACCCCCACATGAGCAATCTCCAGC | + |
win_chr14_000478582 | chr14 | 61,258,368 | 61,258,623 | background | Heterohyrax brucei | Heterohyrax_brucei | GCA_004026845.1 | 77,598 | Procaviidae | mammals | 1 | zoonomia_cactus | HetBruBak_scaffold_4991 | 7,547 | 7,802 | + | 171,260 | 7,546 | 7,803 | 10 | 248 | AAAATGTAACTTTAAAAAAGGCACAAAATTACAACATTGTGGCTTTATTCCAAGTGGTATGGTGCCTTCTCCTTTCTTTTTCTAGGCTTAATATAGCGGGGAGTAGAATAGTCAAATACTATAAAGTTATCAAGTACCCTGGTCTGCACTGGCAGACTTGCCTACCGAGCGTCACATCCTTTCAACTGCTAGGCTTCAAAACACAACTTGCCAACATCAAAAAACCGTTTTGACTTTTATGAGCACACAGACAAA | + |
win_chr5_000721316 | chr5 | 92,328,320 | 92,328,575 | background | Lycaon pictus | Lycaon_pictus | GCA_001887905.1 | 9,622 | Canidae | mammals | 1 | zoonomia_cactus | CM007567.1 | 16,855,034 | 16,855,289 | - | 91,888,778 | 16,855,033 | 16,855,290 | 4 | 254 | TCATTTGAGATCCATGAGCCATTTCAGATGATAAAAAAAAGTACCACTTTATGGAATTTGAACCAGCCCATTAACTTTGCATTGCATAAAACTATCAGGTTAGGATTTTTAATTGAACAGGCTTGAACTTTCTTAGTggctatttcttcctttctatattAAAATCTCATCCTTATTGCCTCTGAGTATACaaacatgcatatacatatacaaacacTGCACTTAATTAAAACCAGAAAGCCCATTTACTTAATT | - |
win_chr1_000227807 | chr1 | 29,159,168 | 29,159,423 | background | Mesoplodon bidens | Mesoplodon_bidens | GCA_004027085.1 | 48,745 | Ziphiidae | mammals | 1 | zoonomia_cactus | MesBid_scaffold_35989 | 4,515 | 4,770 | + | 38,777 | 4,517 | 4,768 | 12 | 229 | CAGACTTATTGTGGAGAATTTGTCAAGTCGGTGCAGCTGGCAAGACCTAAAGGTTTGGGCCCTGTTAACCTTCTGGGTTACAGCTGGGCAGGAGTTAAAGTTGAGTTAAGGAAAGAGATTATTTTATGCAGGCGCAGGGCACACAGAGAAAACTTTCCCAAAGCATTTGGAGATTTTCCAATTAAAGTTTCCATAGGAACACAAAAGACACTGGAATCTCACTGCTACTGGATGTTATGGGGCCAGCATGCTAAG | - |
win_chr4_001390358 | chr4 | 177,965,696 | 177,965,951 | background | Callithrix jacchus | Callithrix_jacchus | GCA_002754865.1 | 9,483 | Cebidae | mammals | 1 | zoonomia_cactus | pat_scaffold_3 | 176,429,444 | 176,429,699 | - | 189,096,842 | 176,429,446 | 176,429,697 | 2 | 251 | GACAAGGCTTAAAGTTTATTTAATAAAGTTCCAATGAAATATTTATAAACGGATACAATTCTAATTAACTGAGAGACATTTTACAAAGGGAAACTAATAACGAGCCTTCTAGACCACGCTTTCTCCATTCAACACTAAAAATTATATAGAGCCCATTTTTATTTCGGAGAAAATATAATAGATGTTCACCAATACCATAACTGACATAATCTAATGAGGAAAATAACCCCTGGCCTTTTTCTTTAATCAAAATAA | - |
win_chr2_000686146 | chr2 | 87,826,560 | 87,826,815 | background | Daubentonia madagascariensis | Daubentonia_madagascariensis | GCA_004027145.1 | 31,869 | Daubentoniidae | mammals | 1 | zoonomia_cactus | ctg162 | 869,105 | 869,360 | - | 6,010,672 | 869,105 | 869,359 | 2 | 254 | gccctctaggccTGCAggaaaaaaactatttcttcttccacatgacagttcttcagatatttcaagacaactagcatgtctccccttagtcttctcatccctaggctaaacacccACGGAAGATTATATTGTAGCATTAATATCTCCACCTTGCATTTTCTACACTCCCACATGTCTTACCCATTGTTACTTCTCTCTAAAACAGTGGGAACAATGAAAAATTATGACATATATGAACCGAATTATATAATCTCA | - |
win_chr11_000163105 | chr11 | 20,877,312 | 20,877,567 | background | Zalophus californianus | Zalophus_californianus | GCA_004024565.1 | 9,704 | Otariidae | mammals | 1 | zoonomia_cactus | ZalCal_flattened_line_1907 | 20,132 | 20,387 | - | 313,770 | 20,131 | 20,387 | 3 | 254 | GCTTCATATTGTCTTCTTGAACAGCAGCATATAATACATGTTGATCTACATTGTTTACATTGGAAATTCATTCTTGTATGTAATTGGGCAAGGTACCGTGGATTCCCTTCAGAGGTCTGTCTTCATCCAGGTAAATAGAAATCCAATATTCCTTCATAAGTAGTGTTGTTGAACCATTGCATTGCTTTGTGTCGAGCTCTGAGGGCTTTACCTGTTAACAGAAAATCTAGTTCTTCATAGAATACTGACAGGTCT | + |
win_chr3_001325098 | chr3 | 169,612,416 | 169,612,671 | background | Orycteropus afer | Orycteropus_afer | GCA_004365145.1 | 9,818 | Orycteropodidae | mammals | 1 | zoonomia_cactus | OryAfe_flattened_line_1284 | 64,068 | 64,323 | - | 123,644 | 64,076 | 64,315 | 7 | 230 | TATCTCACTTTTGGCAAAAACATCCAAAGTGTAGTGTACTTTGCCAACATCATTGCCCTTGGAATTTTTTTTTTTTTTTTTAACttaaaggtagttttaatctgtatgttcctggttcctataatttaaaaatcatcaaaatgttgttttataagagtatctcacaagctttgatgtccaagaagccttgggggcccttttttatgtgcttattttcttttgaaccaggaaattgtgttttgccaagagcaaatg | + |
win_chr10_001009942 | chr10 | 129,272,448 | 129,272,703 | background | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007675.1 | 75,115,499 | 75,115,754 | + | 77,693,121 | 75,115,496 | 75,115,757 | 3 | 255 | CCCCGGGAAAACTGCACCAGGAAGGTAAGCCATGTGGGTAATAGTACATAAGAATCCTAAAATGGCTACTAATTACAATGTTtgcaattatttcaaattttgattttcataataACTCTTCATGGTTGTGTTGACCAGAGGGAAATTTTATTCCCAAATGTGCCCATGTCAAATTTGCCATtatcttccaggaaaaaaaaaaaaatcaaatgaaaaggcctttaaaaagagataaagtttACTCATtggaaatta | + |
win_chr5_000719407 | chr5 | 92,083,968 | 92,084,223 | background | Lepisosteus oculatus | lepOcu1 | LepOcu1/lepOcu1 | 7,918 | Lepisosteidae | ray-finned_fish | 6 | ucsc_multiz100way | chrLG2 | 2,046,067 | 2,046,322 | - | 68,575,853 | 2,046,071 | 2,046,318 | 6 | 244 | CAGAGAGAGTTAACAGCCAGGGGCCAGATCTAAGTCAACATGAGAATCACATTCCTCAGCCTTCCCTGCAGATCAATATCTGCAAATAATAAATGAGATCCCAAAGGGTTGTACTGAACCCTGAACACCACAGTGAAAGTCTGCAATTGGTCTTTGACTCAATAATGCAGGTGAGCGTTGCAATGGAACATCTTTAACACACCATAATAGAAAATTAATGGTGCTCAAATCAGCAATGAGGAGACCCTGAGGACT | - |
win_chr15_000605360 | chr15 | 77,485,952 | 77,486,207 | background | Manis javanica | Manis_javanica | GCF_001685135.1 | 9,974 | Manidae | mammals | 1 | zoonomia_cactus | JSZB01008205.1 | 54,544 | 54,799 | - | 162,766 | 54,554 | 54,789 | 10 | 225 | GCAATGAAAAAAAGTCCTACCTTGTCCTTTTCATCTTAGAGACTTTGTCAACTCTATGTTAACCATCAAGTCtgttaatgcttttaaaatagtaACATTCATTTTACGATTTGTTTATTCAAAATGTGTCTTAGCCTTTGAGAGTTCAGCTCTGTAACAGTACAATGAGTTGTAATTCATTTTAATGGTATTCTGGAGGCAACTTGAAAGAAGTATAATGTTTTTAAAGGCAATGACTTCAGTCCCCTTGACAGG | + |
win_chr4_000834393 | chr4 | 106,802,176 | 106,802,431 | background | Choloepus hoffmanni | Choloepus_hoffmanni | GCA_000164785.2 | 9,358 | Megalonychidae | mammals | 1 | zoonomia_cactus | KN188786.1 | 313,517 | 313,772 | + | 1,412,207 | 313,519 | 313,770 | 8 | 240 | tttttgggttttattttccaAGAGCAAGTTGTAGTacgtttgttttcttcccttagCAGGGGATTCTGCTCAAGCTTGTCTaaatcattttttgtctttagctCACACCATCTTAATAAAACCCAGGTTTATTTTGCTATATTATATGACACATGTTCAGGTTCATGTTTGATTTCAAATTAAGTATCTATATGATTTATGGTAAAGAGTTTACCTCCTTCTTTCCCATGTGGATTCTAATTCCAATCTTCAAGA | - |
win_chr1_001394279 | chr1 | 178,467,584 | 178,467,839 | background | Heterohyrax brucei | Heterohyrax_brucei | GCA_004026845.1 | 77,598 | Procaviidae | mammals | 1 | zoonomia_cactus | HetBruBak_scaffold_67742 | 6,803 | 7,058 | + | 25,900 | 6,803 | 7,058 | 4 | 252 | ACTTTTCTTTTCTCTCACTGACGACAAGCCTGTTAACCCAGCAAAGTGTTAGCGTGCTTAGTGCAGTTGCTTGACATATCTCAGCCTAGTGCATGATGGGGTTTACTTCTTTCCTTGTGGAAAGGAGGATGTTCTCTGAGGTAACTGTGAAAAGTACACTGCATGTGTCTGGCTTGTGACCTCCACTGACCATTGCTTGGCTGTGATGTTCACGGTCTTGTCAGTCACGTCCACTGTGCCATCAACCTCTAGCCC | + |
win_chr13_000576028 | chr13 | 73,731,456 | 73,731,711 | background | Cricetomys gambianus | Cricetomys_gambianus | GCA_004027575.1 | 10,085 | Nesomyidae | mammals | 1 | zoonomia_cactus | CriGam_scaffold_7978 | 14,544 | 14,799 | - | 138,388 | 14,549 | 14,794 | 2 | 244 | CTTGCATCTCTCGGAGGTGCGGAAAAACAAACTCCTATAATTAAAACCAATCAGAAAAGCAATCACCTAGTTCATCAAGTATGTAAACTGCCAACCATAAACCCAACAATATCCCTGAAGGAATTTAATGAACGTTAATTGACTGAATAAACAAATACTATACATTTTTACTCTAATCTTCTTTACAAAGTATCTGGCCTTTAGAATTATACATTGGATAGAGTTTAATGAAATTCCATTACCATTAAGTTTATT | - |
win_chr1_000409495 | chr1 | 52,415,232 | 52,415,487 | background | Dasyprocta punctata | Dasyprocta_punctata | GCA_004363535.1 | 34,846 | Dasyproctidae | mammals | 1 | zoonomia_cactus | DasPun_flattened_line_56912 | 21,146 | 21,401 | + | 25,602 | 21,124 | 21,422 | 18 | 217 | TCTCATCAAGAAAATTTCAGGCCCAACTTTGTTGTAATTGAGGATTTATAGGTGTGTGCCCATGCCCAATTTAAGACTTTCAATTTCTGAACAAAGATTTATATTCTTAAAATAGAGGTCAACATTTACCTTTCAGGAGACTTTGAATGGCTCCTATGTCTGTGACTACGGTGATGAGCTGTGAAAGAAAAGGTCACTGGATAAGTCAGATCTTACTCTTGAACTGTCATTCACAGGTCCCCCAATCCTACCCCA | - |
win_chr1_000862060 | chr1 | 110,343,552 | 110,343,807 | background | Equus caballus | Equus_caballus | GCF_000002305.2 | 9,796 | Equidae | mammals | 1 | zoonomia_cactus | CM000381.2 | 57,899,369 | 57,899,624 | - | 99,680,356 | 57,899,363 | 57,899,630 | 13 | 244 | agttGGGTTCTGCCAGGCTTTCAATAAGTCATTTTCACGGAATAGAAACATGACCATGATCCACAAGGTCCTAAAGTTTCTAATCATAATTAAAGATCAAGGGCCTTAGCTAACGTCCTCAGCATTTAAATCAAGGAGGGAAATATACTTATTAATGACCTGAGAAActaggggtggggcagaggggtagataaaaaagtaagacaaaaaagaaaatgattcatcACTGTTAAGCAGCAAAAGCCCTTGTTAACA | - |
win_chr2_001405306 | chr2 | 179,879,040 | 179,879,295 | background | Eschrichtius robustus | Eschrichtius_robustus | GCA_004363415.1 | 9,764 | Eschrichtiidae | mammals | 1 | zoonomia_cactus | EscRob_flattened_line_7250 | 118,100 | 118,355 | - | 148,651 | 118,101 | 118,354 | 5 | 250 | ATAGATCAAATGATAGCCAGTATTAATCATCTTGCTAGATTTTGGAACCTATTAACTTTCCAAGAACAGTCCCCCAGTGACACAGATCCTTTATTCTGTGATCTGATTTGGTGTCATTTGCCTTTCCTCCTCTTAGAGTAAACCTTAGAAAATGTTAGATACATAAAACCATTTTAAAGTAAATATTTTTTTCACTGGCCAAGCAGATGAAAGTTCAGTTTAACAAAACTCTTCTTGGTTTCTATTTTCTTCGGG | - |
win_chr15_000416607 | chr15 | 53,325,568 | 53,325,823 | background | Kogia breviceps | Kogia_breviceps | GCA_004363705.1 | 27,615 | Physeteridae | mammals | 1 | zoonomia_cactus | KogBre_flattened_line_35432 | 24,894 | 25,149 | + | 37,469 | 24,893 | 25,150 | 2 | 255 | TGTTCCTCCTGCTCTGAAAAGCCAAACAGTACTAAAACCCCACCTCATCTGGCTCTCAGCTCCCTTTGTTCCTCTTAGATTGTTCTGCCATTGCCCTAAGGCCAACAGATCTTTGGGGCAGTGGCCCTGGTTGGTGTTTGGCACAATTTCATTTACTGAACATCTCTATGTACATTTATGATGCCATATAACTAATAATAAAAACAGGACAGCCTCGGGCATCGTTTTTTTTATTGTCAGCACCACGGCAGCTGT | - |
win_chrX_000920036 | chrX | 117,764,480 | 117,764,735 | background | Petromus typicus | Petromus_typicus | GCA_004026965.1 | 10,183 | Petromuridae | mammals | 1 | zoonomia_cactus | PetTyp_scaffold_59073 | 15,539 | 15,794 | + | 21,012 | 15,538 | 15,795 | 9 | 249 | AGTCTTACAGGCTCTTCAGCTAAGTAAGAAAAGGGTGGATTTTTCAGGTCTTTGGTCTAAAAATACATCCATTTTATTAGCTGGAAAAAAAAAAGTTTTCCAGAATGAGGCATTAAATGTAAGTGCTGATTGAATTTTATCTTTCTAGGTAATTAGAAAATAAAAATGAATCTGATAATAGATTTTTAAATGATACTACCCTTCACACACAATAAATTTCTTTGATTTTCCTCTCATATGCATTCAGCTCTGTAC | + |
win_chr2_001375578 | chr2 | 176,073,856 | 176,074,111 | background | Pseudopodoces humilis | pseHum1 | PseHum1.0/pseHum1 | 181,119 | Paridae | birds | 2 | ucsc_multiz100way | KB221194 | 21,697,155 | 21,697,410 | + | 29,024,316 | 21,697,212 | 21,697,352 | 8 | 140 | CATATCTTGTCTGGCTGGTGCCTTTATAGGGATAGAGACAGAGACTATTTTTTCACCGTTTCACTTCAATAAAGTCATCCCAAGGCATTATTTACAACCGCACATAATTTACCTATGCTATTTGGCAAAGCAACTTCGGAAAAGAAAGTGAATGAATAAATACTTCATAACTGCTGGTAGAACAGACTGGATCCTGTAATGAAGAAAAGATTTATGTCACGTTCTTCCAGCCCAAATAGCAGCAGCCTCTGTTTG | - |
win_chr21_000078093 | chr21 | 9,995,776 | 9,996,031 | background | Nannospalax galili | Nannospalax_galili | GCF_000622305.1 | 1,026,970 | Spalacidae | mammals | 1 | zoonomia_cactus | KL201584.1 | 7,662,441 | 7,662,696 | - | 10,689,408 | 7,662,440 | 7,662,697 | 5 | 254 | GGCTGACTTATTTCTATCTGCTTTTTATTCACTTTTGAAAATCAGGCTACTGATGCATATTAGAATTTAATTACACCAATTAGTACTGCCACATCAGACATATGATGTGCCTTCAATTAAGAAGTACCTAATGGGTATTAGTACAATTAAGATTCATAATTAAAGTTCTAAGAACAGCCAATTTAAACATTATGATTACTAAACATTAAAAATCTACTGGTGAAATTAAAGCTGAGTAGACTATTTAGCTTCTTT | - |
win_chr13_000584967 | chr13 | 74,875,648 | 74,875,903 | background | Tadarida brasiliensis | Tadarida_brasiliensis | GCA_004025005.1 | 9,438 | Molossidae | mammals | 1 | zoonomia_cactus | TadBra_scaffold_54457 | 10,366 | 10,621 | - | 23,223 | 10,365 | 10,622 | 2 | 255 | aagcctaatgcctctcccacacgacaaaacattagataatggatgggatccatcacgtctccccatttcatgccagggcttttcttttcaaggttaaagaccctcaatttctttaatgtccctcatttcgcattcgacatcctgataatcctcctttgaatgaatgcaattccatttgtcaatgacccttataaaatgtatttctgagaatgaacacagtgatctacatgtggtctacccagcctagggtagaga | - |
win_chr17_000377418 | chr17 | 48,309,376 | 48,309,631 | background | Equus caballus | Equus_caballus | GCF_000002305.2 | 9,796 | Equidae | mammals | 1 | zoonomia_cactus | CM000387.2 | 24,395,795 | 24,396,050 | + | 61,308,211 | 24,395,795 | 24,396,050 | 4 | 252 | GTGAGTGGCATATATGtggacatatatgtatatatacataccaatacgtacatatgtatttatatctatgtatacaGATCCTTCCTTATACAAACAAGGATTTATGTGAATGCAGGATTTTATGTCCACATAAACTTTTGCTCATGGTTGAATTATTGTAGGTCACCTTAAGTTAAGGAGATTTGTACCCTTAGAAAATCTATTTGAGAATTGTCAAGGCAGTGCTTACAAGGGAAttcaaaaatgtttgtttac | - |
win_chr2_001676017 | chr2 | 214,530,048 | 214,530,303 | background | Lycaon pictus | Lycaon_pictus | GCA_001887905.1 | 9,622 | Canidae | mammals | 1 | zoonomia_cactus | CM007562.1 | 21,796,548 | 21,796,803 | + | 30,896,855 | 21,796,548 | 21,796,803 | 6 | 250 | acGTCAAAGTTATGAGAATTACAGCAGTTCAGAGAATAACTTACCACgcagggaagaaatgaaattatgcTGTACTTAGGTCCCCATTTCCTCTGCAAAGtaattctaaaatgaatttgTGCCAAGTGGGGCTTGAGCCAacatttctctctcccacagCTCACCTTTTCTTAGTTAAAATGTACAAGTTGTGACAGCACCGCCATTTCCATGGCCTTGTGGTATATGAGCAACAAGAACAACCAGCAATGATTC | + |
win_chr7_001214938 | chr7 | 155,511,936 | 155,512,191 | background | Ailurus fulgens | Ailurus_fulgens | GCA_002007465.1 | 9,649 | Ailuridae | mammals | 1 | zoonomia_cactus | LNAC01000193.1 | 1,828,377 | 1,828,632 | - | 5,186,140 | 1,828,375 | 1,828,634 | 6 | 252 | CATATTGTAATGAGCCTGGTATCTCGGAGCCGGTCCTTCCCGGGGGGAGACAGCCCTCCCCTAAGATTACAATAGCAGTTCCTTTATTGACAAGTACTATTCACAACCTGCATCGTATAGAAAGAAAGACTTCGTTTTATTCCACTTGTCTCAATACTTATTGCACTCTTATAATCAAAACACTTTGAGGGTAGAAAAAGGCCCAATTATTCTAGGAACAGTCGTTAAATTTCCCGAAGGCAGTTCCGCGAAGTG | - |
win_chr20_000094494 | chr20 | 12,095,104 | 12,095,359 | background | Lipotes vexillifer | Lipotes_vexillifer | GCF_000442215.1 | 118,797 | Lipotidae | mammals | 1 | zoonomia_cactus | KE558082.1 | 2,255,389 | 2,255,644 | - | 4,099,217 | 2,255,389 | 2,255,644 | 8 | 247 | GACTAAATTGCTGCTCAGGGAAATGGTATTTggctaaagagaaaaaatattggtGCAGGGGGAGAGATTTGTGCTGTCTGAATCCTAGGCCACTTTCTGatctaaagaaaagaataaaaattatgtaataaatCAATATATTCCCCACACCACAgtagaaaaaaaaggcaggggtGGCTGGGCTATTCCCAGCTGAGATATATTGTAGAGCAGAATATGATACCAACTCATGGAAATTTTCTACCATATGCATCC | - |
win_chr1_000057367 | chr1 | 7,342,848 | 7,343,103 | background | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007662.1 | 64,603,920 | 64,604,175 | - | 141,296,404 | 64,603,918 | 64,604,176 | 2 | 255 | ACCTGTTTTCTGCAACTCCACGCCTGTCCTTCGAGAGCCATTTCCCACTTTCCCTACAACCATCAATCAGACACAGGTCTCCTTGCTCCTATTAAGGCCCAAGACACGTGCCCTCCTCGCTCTGTGGGCGCCGGTTCTGCGGCCGCACATCACACAGCGCTGACCCTCACGCCTTCTCCCTGACCCCGTGCGCTGCTAAAATATTGTCCTGTGGATAGGAAATGAAAAGGGTACAACCTTATTTCTTCAAAGATA | + |
win_chr4_000037831 | chr4 | 4,842,240 | 4,842,495 | background | Elephantulus edwardii | Elephantulus_edwardii | GCA_004027355.1 | 28,737 | Macroscelididae | mammals | 1 | zoonomia_cactus | JH947258.1 | 1,334,057 | 1,334,312 | + | 9,290,576 | 1,334,064 | 1,334,304 | 16 | 212 | GTGACACGCAGCCATGAGGCTCCCGTTAGAAGCCATCCTTCAATTTCCAATAAAAACCCCTGGAGTAAGGATGACACGCAGTAAATCAGCCTTCCCCTGGGTCTCATCCTGAAGTAATCTTTTCAATTATCAGCTTGCACAGAGCGCGTCGCCTGGGACAATCAGAAATGCGTGTCCTGGGGCAAGCTCTGTCGCCTGCAGCTCCGAGACCAGGCTGGCCAGGGGCCAGAGGCAGCCAGTGGCGAGGTTCCAGGG | + |
win_chr10_001011284 | chr10 | 129,444,224 | 129,444,479 | background | Macroglossus sobrinus | Macroglossus_sobrinus | GCA_004027375.1 | 326,083 | Pteropodidae | mammals | 1 | zoonomia_cactus | MacSob_scaffold_14684 | 0 | 255 | + | 23,415 | 8 | 238 | 7 | 229 | GACCTCAAGATGTGAACCATAAGCATAGTGCCCGATAAAACCGTCATTAGCAGTCCCCACCATTTCAGCGACATGCTTGCGGGTCAAGCGGCTTTAAAAATGATAACTGGCGTGGAAAGGTTGGACAAAGAGCACTCGTTCTAAGGGGAGCCATTCCTTAGCCAAATCGCTGAAACCGTTTTAATGGCCCTTGCTCATTTAGGTCTGAGCTGCGGAGGGGACCCTAACCGGAAGGAAGCTTGGATCCAGTGTCCC | - |
win_chr16_000492701 | chr16 | 63,065,600 | 63,065,855 | background | Scalopus aquaticus | Scalopus_aquaticus | GCA_004024925.1 | 71,119 | Talpidae | mammals | 1 | zoonomia_cactus | ScaAqu_scaffold_2845 | 21,867 | 22,122 | + | 200,392 | 21,876 | 22,112 | 5 | 235 | ATGCATTGAACACAGCAGTCATGTGTTACGGCTGGGGAATCATTGTCCCCAAAGATTGCCTTAGAGGCAGTCTCCCTAAGGCAATGCCAGTATCATGACATCATTTTGCATGAAAATTACAATGAGAATTTAAAATCTATTTTCCACATCTCTGTTAGCAGCCTGTTCCTATCATGGAACATTTCACAAATTCCCAGTTGATTGAACTCCTCATTTTGTGATCATATACTTCCTGTTTTTCTAGCAGCTTCTGAT | - |
win_chr2_000295501 | chr2 | 37,824,000 | 37,824,255 | background | Hipposideros armiger | Hipposideros_armiger | GCA_001890085.1 | 186,990 | Hipposideridae | mammals | 1 | zoonomia_cactus | JXIK01000117.1 | 1,992,607 | 1,992,862 | + | 3,646,658 | 1,992,607 | 1,992,862 | 6 | 252 | CACTTGTACTAGTGCCTATAAATCTACAGTAAGGAATTTTGCCTTAGTACCTCAAAACAGGCTATTCCTTTTTCTCTGGATTTATGGAAGAACTTTAAAGGCATTTTGTGTACATAGTTATACAGTCTGTGCTTTAATTCAGTGGGACTCTTGGCTGAGTATGGACTGCAAAGTTAGACACTTGGGGTTCAATTTTCTTTGGTATATCTTTCCCAGatatgacttcattttatttatacaaactCATGATGTCTC | + |
win_chr14_000414821 | chr14 | 53,096,960 | 53,097,215 | background | Rhinolophus sinicus | Rhinolophus_sinicus | GCA_001888835.1 | 89,399 | Rhinolophidae | mammals | 1 | zoonomia_cactus | LVEH01000040.1 | 5,755,516 | 5,755,771 | + | 10,656,583 | 5,755,513 | 5,755,773 | 14 | 238 | tacttgagCAGTATTTAACCTTTGAATGTCACATTAATGTAGAAGGGAGTGAGGATGAAAAATGTTATAAGAACATAAATGTGAACTAAATCCTGAAGGTTCTGTTGTTCACTAACGGAACTGTTAAACTGATTTGTAAGGTTCAGGTGCAACtgggttttaaaataattgcttacttaaaatataaagaaattaattgaTAAATAACTAGCACTATTTGACAGGGGAAATGTTAACTTAAGGTTATCTACTGAT | - |
win_chr1_000084212 | chr1 | 10,779,008 | 10,779,263 | background | Cavia porcellus | Cavia_porcellus | GCF_000151735.1 | 10,141 | Caviidae | mammals | 1 | zoonomia_cactus | DS562880.1 | 23,247,862 | 23,248,117 | - | 28,222,655 | 23,247,853 | 23,248,126 | 9 | 249 | GGCCGCGCCACGCACACAGCCCGGGGAGTTTTATTTGGTTCGAACTGGCTTctgcattttttccttcttatttttttctccccacccatgaaacaaaagaaagtttGTTGTGGAGGCGCAAACCTTTCTTGGGCCTTGTCCGAGTTctaccttgtttttcttttcctttctttccccctctccAACCCCGCCTTCCCTGCCTCCCCACCTTGAATAAATAAAGCACCCATAGCTGGCACCGGCTGGTAAGGAAAG | + |
win_chr2_000812913 | chr2 | 104,052,736 | 104,052,991 | background | Columba livia | colLiv1 | Cliv_1.0/colLiv1 | 8,932 | Columbidae | birds | 2 | ucsc_multiz100way | KB375445 | 439,507 | 439,762 | - | 2,724,620 | 439,507 | 439,762 | 7 | 255 | ATTAACTTTTCAAAAAGCACCAGTTCCCTTCTGTCACTAATGACATGCGTAACAGTTTAATGTAATGCTACTTTTAATTATTAGAGccctttcttttaaatatcaaatttCCCTCTCTAAATTGTCCTGAGTTCTCTTTACAGTCTCATCTGTCACTGTAAATGTCATCATTTTATTCCTCCTTTGGATGCAGTGACAGGCCCACTCTTATCCCCAGCTTTATCTCTTTTTCCATCCTTTATTGTACTACAAAGA | - |
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marin-dna/vertebrate-v1-background
Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and UCSC hg38 MultiZ 100-way alignment. This
draft covers the background region cohort with all species
scope and preserves source FASTA/2bit letter case.
Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.
Produced by the commit-pinned vertebrate projection pipeline.
Splits
train: 38,913,362 rows; no chromosome-18 source anchors.validation: 16,384 original-orientation chromosome-18 rows (4,194,304 tokens including BOS).
The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.
| Projection backend | Clade | Selected species |
|---|---|---|
| ucsc_multiz100way | amphibians | 1 |
| ucsc_multiz100way | birds | 11 |
| ucsc_multiz100way | jawless_vertebrates | 1 |
| ucsc_multiz100way | lobe-finned_fish | 1 |
| ucsc_multiz100way | ray-finned_fish | 9 |
| ucsc_multiz100way | reptiles | 5 |
| zoonomia_cactus | mammals | 107 |
Schema
query_name:Stringsource_chrom:Stringsource_start:Int64source_end:Int64region_label:Stringspecies:Stringalignment_name:Stringassembly:Stringtaxonomy_id:Int64family:Stringclade:Stringphylogenetic_rank:Int64alignment_source:Stringt_chrom:Stringt_start:Int64t_end:Int64t_strand:Stringt_src_size:Int64pre_resize_t_start:Int64pre_resize_t_end:Int64fragment_count:Int64aligned_bases:Int64sequence:Stringaugmentation:String
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