scRegNet / data /processed /validation /canonical_tfs.json
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{
"Astrocyte": {
"canonical_tfs": [
"SOX9",
"NFIA",
"NFIB"
],
"n_canonical": 3,
"missing_from_gstar": []
},
"Endothel": {
"canonical_tfs": [
"FLI1",
"ERG",
"ETS1",
"KLF2"
],
"n_canonical": 4,
"missing_from_gstar": []
},
"Excitatory neuron": {
"canonical_tfs": [
"NEUROD2",
"NEUROD6",
"TBR1"
],
"n_canonical": 3,
"missing_from_gstar": []
},
"Inhibitory neuron": {
"canonical_tfs": [
"DLX1",
"DLX2",
"DLX5"
],
"n_canonical": 3,
"missing_from_gstar": []
},
"Lymphocyte": {
"canonical_tfs": [
"IKZF1",
"TCF7",
"LEF1",
"GATA3",
"TBX21"
],
"n_canonical": 5,
"missing_from_gstar": []
},
"Malignant": {
"canonical_tfs": [],
"n_canonical": 0,
"missing_from_gstar": []
},
"Malignant_MES": {
"canonical_tfs": [
"CEBPB",
"RUNX1",
"RUNX2",
"FOSL2",
"BHLHE40",
"WWTR1"
],
"n_canonical": 6,
"missing_from_gstar": []
},
"Malignant_OPC": {
"canonical_tfs": [
"SOX2",
"OLIG2",
"ASCL1",
"NKX2-2",
"SOX10"
],
"n_canonical": 5,
"missing_from_gstar": []
},
"Malignant_AC": {
"canonical_tfs": [
"SOX9",
"NFIA",
"NFIB",
"HES1",
"HEY1"
],
"n_canonical": 5,
"missing_from_gstar": []
},
"Malignant_NPC": {
"canonical_tfs": [
"SOX4",
"SOX11",
"NEUROD1",
"NEUROG2"
],
"n_canonical": 4,
"missing_from_gstar": []
},
"OPC": {
"canonical_tfs": [
"OLIG2",
"SOX10",
"NKX2-2"
],
"n_canonical": 3,
"missing_from_gstar": []
},
"Oligodendrocyte": {
"canonical_tfs": [
"SOX10",
"MYRF",
"OLIG1",
"OLIG2"
],
"n_canonical": 4,
"missing_from_gstar": []
},
"Other": {
"canonical_tfs": [],
"n_canonical": 0,
"missing_from_gstar": []
},
"Pericyte": {
"canonical_tfs": [
"NOTCH3"
],
"n_canonical": 1,
"missing_from_gstar": []
},
"TAM": {
"canonical_tfs": [
"SPI1",
"CEBPB",
"IRF8",
"MAFB"
],
"n_canonical": 4,
"missing_from_gstar": []
}
}