metadata
license: cc-by-4.0
tags:
- biology
- rna
Overview
This dataset is redistributed as part of mRNABench: https://github.com/morrislab/mRNABench
Protein localization is an annotation of the subcellular compartments that proteins are found in. This task is a multilabel classification -- proteins can be found in more than one compartment.
Data Format
Description of data columns:
- Target: One hot labelling of cellular components that a protein appear in. TODO: Add class order.
- CDS: binary track which reports position of first nucleotide in each codon in CDS.
- Splice: binary track which reports position of the 3' end of each exon, indicating splice sites.
Data Source
This dataset is a Hugging Face redistribution of the subcellar localization data from Protein Atlas (proteinatlas.org) (Thul, P. J. et al. 2017).
Original paper: https://www.science.org/doi/10.1126/science.aal3321
Original dataset source: https://www.proteinatlas.org/