Datasets:

---

mp-mt

/

dataset

like 0

Follow

MP-MT 2

Error code:   DatasetGenerationError
Exception:    CastError
Message:      Couldn't cast
candidate_id: string
gene_id: string
transcript_id: string
species: string
correct_start: bool
candidate_index: int64
orf: string
orf_start: int64
orf_end: int64
five_prime: string
three_prime: string
genomic_before_five_prime: string
genomic_after_three_prime: string
taxon_id: string
transcript_key: string
in_frame_nearest_upstream_stop_distance_fraction: double
in_frame_nearest_upstream_stop_distance_nt: int64
candidate_atg_pos: int64
netstart_origin: string
transcript_dna: string
dataset: string
transcript_length_nt: int64
orf_length_aa: int64
to
{'candidate_id': Value('string'), 'dataset': Value('string'), 'gene_id': Value('string'), 'transcript_id': Value('string'), 'species': Value('string'), 'taxon_id': Value('string'), 'netstart_origin': Value('string'), 'transcript_key': Value('string'), 'correct_start': Value('bool'), 'candidate_index': Value('int64'), 'candidate_atg_pos': Value('int64'), 'transcript_dna': Value('string'), 'orf': Value('string'), 'orf_start': Value('int64'), 'orf_end': Value('int64'), 'orf_length_aa': Value('int64'), 'transcript_length_nt': Value('int64'), 'in_frame_nearest_upstream_stop_distance_nt': Value('int64'), 'in_frame_nearest_upstream_stop_distance_fraction': Value('float64'), 'five_prime': Value('string'), 'three_prime': Value('string')}
because column names don't match
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1816, in _prepare_split_single
                  for key, table in generator:
                                    ^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 613, in wrapped
                  for item in generator(*args, **kwargs):
                              ~~~~~~~~~^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/json/json.py", line 343, in _generate_tables
                  self._cast_table(pa_table, json_field_paths=json_field_paths),
                  ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/json/json.py", line 132, in _cast_table
                  pa_table = table_cast(pa_table, self.info.features.arrow_schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2369, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2297, in cast_table_to_schema
                  raise CastError(
                  ...<3 lines>...
                  )
              datasets.table.CastError: Couldn't cast
              candidate_id: string
              gene_id: string
              transcript_id: string
              species: string
              correct_start: bool
              candidate_index: int64
              orf: string
              orf_start: int64
              orf_end: int64
              five_prime: string
              three_prime: string
              genomic_before_five_prime: string
              genomic_after_three_prime: string
              taxon_id: string
              transcript_key: string
              in_frame_nearest_upstream_stop_distance_fraction: double
              in_frame_nearest_upstream_stop_distance_nt: int64
              candidate_atg_pos: int64
              netstart_origin: string
              transcript_dna: string
              dataset: string
              transcript_length_nt: int64
              orf_length_aa: int64
              to
              {'candidate_id': Value('string'), 'dataset': Value('string'), 'gene_id': Value('string'), 'transcript_id': Value('string'), 'species': Value('string'), 'taxon_id': Value('string'), 'netstart_origin': Value('string'), 'transcript_key': Value('string'), 'correct_start': Value('bool'), 'candidate_index': Value('int64'), 'candidate_atg_pos': Value('int64'), 'transcript_dna': Value('string'), 'orf': Value('string'), 'orf_start': Value('int64'), 'orf_end': Value('int64'), 'orf_length_aa': Value('int64'), 'transcript_length_nt': Value('int64'), 'in_frame_nearest_upstream_stop_distance_nt': Value('int64'), 'in_frame_nearest_upstream_stop_distance_fraction': Value('float64'), 'five_prime': Value('string'), 'three_prime': Value('string')}
              because column names don't match
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1683, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1869, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset