Search is not available for this dataset
id
float64 286
2.87k
⌀ | design
stringlengths 1
92
⌀ | sequence
stringlengths 74
86
| activation_ratio
float64 0.02
60
| ligand
stringclasses 3
values | switch
stringclasses 2
values | kd_off
float64 2.54
1.9k
| kd_on
float64 2.53
1.53k
| kd_fmn
float64 8.14
1.7k
⌀ | kd_no_fmn
float64 8.17
1.72k
⌀ | min_kd_val
float64 2.53
10.3
| ms2_aptamer
stringclasses 128
values | lig_aptamer
stringclasses 59
values | ms2_lig_aptamer
stringclasses 406
values | log_kd_nolig
float64 0.93
7.45
| log_kd_lig
float64 0.93
7.55
| log_kd_nolig_scaled
float64 0
6.43
| log_kd_lig_scaled
float64 -0.16
5.98
| log_AR
float64 -3.72
4.09
| folding_subscore
float64 4.86
30
⌀ | num_clusters
float64 51
930
⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
null |
Ritiar
|
AUCGAACAUGAGGAUCACCCAUGUCAGUCGAACCAAGGAUAUGGGCAGGGUUCUCUUGCACCAGAAGGUGGCUAAA
| 0.59
|
FMN
|
ON
| 56.85
| 95.74
| 95.74
| 56.85
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.040416
| 4.561636
| 1.705364
| 2.226584
| -0.527633
| null | 56
|
null |
Besoon
|
CGCAAACAUGAGGAUCACCCAUGUCAAUGUGAUCAAGGAUAUGGGUUCCUAAACGGAACACCAGAAGGUGAGUAGA
| 3.58
|
FMN
|
ON
| 85.19
| 23.77
| 23.77
| 85.19
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.444884
| 3.168424
| 2.109832
| 0.833372
| 1.275363
| null | 65
|
null |
Socedior
|
GUAGAACAUGAGGAUCACCCAUGUGAUUACGAUGUAGGAUAUGGGCAUGAGAAGUCAUUUCUAGAAGGGCAGAUAA
| 0.92
|
FMN
|
ON
| 141.39
| 154.27
| 154.27
| 141.39
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.951522
| 5.038704
| 2.61647
| 2.703652
| -0.083382
| null | 51
|
null |
Aanatte
|
AGGUGACAUGAGGAUCACCCAUGUUGCAUAAAACAAGGAUAUGGGUGGCGGGAUCGCCAAUCAGAAGGUGUUCCGA
| 1.2
|
FMN
|
ON
| 44.08
| 36.88
| 36.88
| 44.08
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.786006
| 3.607669
| 1.450954
| 1.272617
| 0.182322
| null | 61
|
null |
Atle
|
GGGCGACAUGAGGAUCACCCAUGUAACCAAAACGAAGGAUAUGGGCCUGAACGUCCAGGACUAGAAGGUCGGAAAC
| 1.22
|
FMN
|
ON
| 21.99
| 17.97
| 17.97
| 21.99
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.090588
| 2.888704
| 0.755536
| 0.553651
| 0.198851
| null | 60
|
null |
Geeseris
|
UGAAAACAUGAGGAUCACCCAUGUCUAGGAGAUCGAGGAUAUGGGCCGGCACUAGGCGGGCCAGAAGGCGAAAAGU
| 2.28
|
FMN
|
ON
| 60.83
| 26.63
| 26.63
| 60.83
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.108083
| 3.282038
| 1.773031
| 0.946986
| 0.824175
| null | 59
|
null |
Cearesor
|
CGUGCACAUGAGGAUCACCCAUGUCGUCGCGAUCAAGGAUAUGAAAGCAGCGUUAUGUUAUCAGAAGGUGAACCUC
| 1.28
|
FMN
|
ON
| 28.12
| 21.94
| 21.94
| 28.12
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.336481
| 3.088311
| 1.001429
| 0.753259
| 0.24686
| null | 112
|
null |
A
|
GCCGGGUCAGGAUAUGGGCCCGGGCCCGAAAGGGCCCGGGCCCAGAAGGGACAUGAGGAUCACCCAUGUCCGGC
| 0.85
|
FMN
|
OFF
| 16.49
| 19.51
| 16.49
| 19.51
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 2.970927
| 2.802754
| 0.635875
| 0.467702
| -0.162519
| null | 280
|
null |
A
|
GGGCCCGGAGGAUAUACAUGAGGAUCACCCAUGUGCCGGGCCCAACGGGCCCGGCUGUGUAGAAGGCCGGGCCC
| 0.94
|
FMN
|
OFF
| 12.48
| 13.31
| 12.48
| 13.31
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.588516
| 2.524127
| 0.253463
| 0.189075
| -0.061875
| null | 219
|
null |
EX2 Malc#37
|
AAAUAGCGAGGAUAUACAUGAGGAUCACCCAUGUGGACUGAUGUCGCGUGAUUCAGUGGUAGAAGGUGCUCAAA
| 1.68
|
FMN
|
OFF
| 76.3
| 45.41
| 76.3
| 45.41
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.815732
| 4.334673
| 1.48068
| 1.999621
| 0.518794
| null | 68
|
null |
Inxeticeon
|
ACACGACAUGAGGAUCACCCAUGUUUCCGAUUCACAGGAUAUGGGACAUCCGGAGGGUGACCAGAAGGGUGACUCG
| 5.34
|
FMN
|
ON
| 151.3
| 28.31
| 28.31
| 151.3
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.019265
| 3.343215
| 2.684212
| 1.008163
| 1.675226
| null | 123
|
null |
Geenvein
|
AGCCAACAUGAGGAUCACCCAUGUGUACGUUAUGUAGGAUAUCUGAUGCGCGCGUGCGCAAGAGAAGGACGAGACG
| 1.58
|
FMN
|
ON
| 33.41
| 21.2
| 21.2
| 33.41
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.508855
| 3.054001
| 1.173803
| 0.718949
| 0.457425
| null | 63
|
null |
Isverege
|
AAGCCACAUGAGGAUCACCCAUGUAUUUGACAGCGAGGAUAUGGGCCGCCAUGACGAGCACCAGAAGGCGCUGGUA
| 1.28
|
FMN
|
ON
| 20.86
| 16.27
| 16.27
| 20.86
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.037833
| 2.789323
| 0.702781
| 0.454271
| 0.24686
| null | 145
|
null |
Orxeatre
|
ACGAAACAUGAGGAUCACCCAUGUGCUUAAAGUGUAGGAUAUGGGAUAGCCUAGGUAGUCUCAGAAGGGCACCAAU
| 2
|
FMN
|
ON
| 45.07
| 22.48
| 22.48
| 45.07
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.808217
| 3.112626
| 1.473165
| 0.777574
| 0.693147
| null | 86
|
null |
Xesove
|
ACUCUACAUGAGGAUCACCCAUGUUGAGCCCAUCAAGGAUAUGGGUCUUAAUCGCGGGUGCCAGAAGGUGAUGGUU
| 0.83
|
FMN
|
ON
| 90.99
| 109.16
| 109.16
| 90.99
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.51075
| 4.692815
| 2.175697
| 2.357762
| -0.18633
| null | 168
|
null |
Berasoama
|
UCCGAACAUGAGGAUCACCCAUGUCUAAUACGUCAAGGAUAUGGGCGCGGAGAACCGCAACCAGAAGGUGAGAAAU
| 5.67
|
FMN
|
ON
| 506.85
| 89.36
| 89.36
| 506.85
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 6.228215
| 4.492673
| 3.893163
| 2.157621
| 1.735189
| null | 55
|
null |
Onletete
|
UCCUGACAUGAGGAUCACCCAUGUAAUUCCUGCCGAGGAUAUGGGCAACAAAGCGGUUGGCCAGAAGGCGGACAGC
| 1.67
|
FMN
|
ON
| 251.57
| 150.34
| 150.34
| 251.57
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.527721
| 5.012899
| 3.192669
| 2.677847
| 0.512824
| null | 63
|
null |
Leate
|
AGCCAACAUGAGGAUCACCCAUGUCUACAGGAUUAAGGAUAUGGGCAGGACUUCCCUGCACUAGAAGGUGAUCCAA
| 0.12
|
FMN
|
ON
| 28.91
| 251.21
| 251.21
| 28.91
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.364188
| 5.526289
| 1.029135
| 3.191237
| -2.120264
| null | 78
|
null |
EX4 Malc#16
|
AAAAAGUGAGGAUAUACGGUGUGGAGUAGACACAACCAGACGUAGAAGGCACAUGAGGAUCACCCAUGUCCAAA
| 0.89
|
FMN
|
OFF
| 21.39
| 24.08
| 21.39
| 24.08
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.181382
| 3.062924
| 0.846329
| 0.727871
| -0.116534
| null | 57
|
null |
Esorxece
|
AUAAAACAUGAGGAUCACCCAUGUCAGUUAUCAUGAGGAUAUCCGCCGACCCGGGCGUAAGGAGAAGGCAUAUAAU
| 1.96
|
FMN
|
ON
| 39.33
| 20.1
| 20.1
| 39.33
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.671988
| 3.00072
| 1.336935
| 0.665668
| 0.672944
| null | 107
|
null |
EX2 Malc#30
|
AAAUCAGCAGGAUAUGCGAUGUUGUGCUAGAUAGCGGGACCACAUGAGGAUCACCCAUGUAGAAGGGCUAGAUA
| 0.37
|
FMN
|
OFF
| 18.91
| 51.43
| 18.91
| 51.43
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.940222
| 2.939691
| 1.605169
| 0.604639
| -0.994252
| null | 130
|
null |
A1
|
GCCCAACAUGAGGAUCACCCAUGUAAGGAUAUUGGAUGUGUGUGGAAACAUAUAUAAACGAGAAGGUACAGGGC
| 0.75
|
FMN
|
OFF
| 28.92
| 38.37
| 28.92
| 38.37
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.647276
| 3.364533
| 1.312224
| 1.029481
| -0.287682
| null | 95
|
null |
SS1 - 1095
|
AAAAGACAUGAGGAUCACCCAUGUAAAAACAUGAGAGGAUAUCAUCUGACUUCGGUCAGAUGAGAAGGCUCAUGUC
| 1.81
|
FMN
|
ON
| 48.73
| 26.89
| 26.89
| 48.73
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.886295
| 3.291754
| 1.551243
| 0.956702
| 0.593327
| null | 58
|
null |
EX1 Malc#40
|
UUGCUACAUGAGGAUCACCCAUGUCAGGAUAUAGUGCAUAGCGUGGAAGCUCUGUCGAUUAGAAGGGACUGUCU
| 1.09
|
FMN
|
OFF
| 27.43
| 25.25
| 27.43
| 25.25
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.228826
| 3.311637
| 0.893774
| 0.976585
| 0.086178
| null | 307
|
null |
EX1 Malc#29
|
UUACUACAUGAGGAUCACCCAUGUCAGGAUAUUGUUUAUACCUUGGAAUACGUGUCAACAAGAAGGGACUAUAU
| 1.02
|
FMN
|
OFF
| 23.37
| 22.87
| 23.37
| 22.87
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.129826
| 3.151453
| 0.794774
| 0.816401
| 0.019803
| null | 171
|
null |
Orbiesesor
|
CCAUAACAUGAGGAUCACCCAUGUCGACUAAAUCAAGGAUAUGGGAACGCGCAAGCAAAACCAGAAGGUGAGGUCC
| 1.08
|
FMN
|
ON
| 255.18
| 236
| 236
| 255.18
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.541969
| 5.463832
| 3.206917
| 3.12878
| 0.076961
| null | 64
|
null |
Isbetereon
|
AAAUAACAUGAGGAUCACCCAUGUCCGCGCCAUCAAGGAUAUGGGUGCCGGCUAGGUCAGCUAGAAGGUGGUGGUG
| 0.83
|
FMN
|
ON
| 28.78
| 34.49
| 34.49
| 28.78
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.359681
| 3.540669
| 1.024628
| 1.205617
| -0.18633
| null | 57
|
null |
Soriti
|
GGCUAACAUGAGGAUCACCCAUGUCGCCAAAAUCGAGGAUAUGGGUGCCAGCUCGGGCAGCCAGAAGGCGACAAAA
| 6.81
|
FMN
|
ON
| 225.26
| 33.07
| 33.07
| 225.26
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.417255
| 3.498627
| 3.082203
| 1.163574
| 1.918392
| null | 85
|
null |
Eratete
|
GAAUAACAUGAGGAUCACCCAUGUGAUUCGCAUGUAGGAUAUGGGCACGCGCCCGCGUGUCCAGAAGGACAGGCUA
| 1.18
|
FMN
|
ON
| 153.56
| 130.27
| 130.27
| 153.56
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.034091
| 4.869609
| 2.699039
| 2.534557
| 0.165514
| null | 85
|
null |
Uscexe
|
AAUAAACAUGAGGAUCACCCAUGUCCCACCAGCCAAGGAUAUGGGCCCGCCGCACAGGUACCAGAAGGUGGCUGCC
| 2.96
|
FMN
|
ON
| 164.95
| 55.74
| 55.74
| 164.95
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.105642
| 4.020698
| 2.77059
| 1.685646
| 1.085189
| null | 63
|
null |
Biarzave
|
GACGGACAUGAGGAUCACCCAUGUAGGUUGGCCACAGGAUAUGCAAAACGGCCUGCCGCGGCAGAAGGGUGAGCCC
| 0.89
|
FMN
|
ON
| 39.12
| 43.73
| 43.73
| 39.12
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.666634
| 3.778034
| 1.331582
| 1.442982
| -0.116534
| null | 132
|
null |
Sogequza
|
UCGAAACAUGAGGAUCACCCAUGUGCUCACGACAUAGGAUAUACUAGCUCGAAGAGCUGCGUAGAAGGGUGAAGUG
| 1.71
|
FMN
|
ON
| 45.89
| 26.79
| 26.79
| 45.89
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.826247
| 3.288029
| 1.491195
| 0.952976
| 0.536493
| null | 85
|
null |
A
|
GCCCGGGCAGGAUAUGCAGGCCCGGGAAACCGGGCCAUGGGACAUGAGGAUCACCCAUGUAGAAGGGCCCGGGC
| 1.01
|
FMN
|
OFF
| 17.26
| 17.12
| 17.26
| 17.12
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.840247
| 2.848392
| 0.505195
| 0.513339
| 0.00995
| null | 227
|
null |
Lesousatle
|
GGCAUACAUGAGGAUCACCCAUGUAACCUGCACUAAGGAUAUGGCGUGGCCCAUGGCUACCCAGAAGGUAGAUAAA
| 0.7
|
FMN
|
ON
| 135.59
| 194.63
| 194.63
| 135.59
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.909636
| 5.2711
| 2.574583
| 2.936048
| -0.356675
| null | 72
|
null |
EteRNA is fun!
|
GGAAAACAUGAGGAUCACCCAUGUGAAAACGUGGGAGGAUAUGGAUGGAAACCAUACUGUCCAGAAGGCCCAUGUC
| 3.58
|
FMN
|
ON
| 67.56
| 18.86
| 18.86
| 67.56
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.213016
| 2.937043
| 1.877964
| 0.601991
| 1.275363
| null | 89
|
null |
Qubeerri
|
AUGGUACAUGAGGAUCACCCAUGUCCAGCAAAUCAAGGAUAUGGACGACAAAUUUCUCGGCCAGAAGGUGAAACAA
| 1.83
|
FMN
|
ON
| 39.41
| 21.53
| 21.53
| 39.41
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.67402
| 3.069447
| 1.338967
| 0.734395
| 0.604316
| null | 75
|
null |
Ex 3May 51
|
AGUGGUGGAGGAUAUACAUGAGGAUCACCCAUGUAAAUCACACAUGUGGUCAAAGCAUGUAGAAGGCCACUACA
| 1.1
|
FMN
|
OFF
| 109.45
| 99.62
| 109.45
| 99.62
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.601363
| 4.695468
| 2.266311
| 2.360416
| 0.09531
| null | 105
|
null |
Mat - Exclusion 4 - Eli mod - D97
|
AUCUCGUCAGGAUAUGACUACAUAAAAAAUAAAAAAUGUAGUCAGAAGGGACAUGAGGAUCACCCAUGUACCAA
| 0.96
|
FMN
|
OFF
| 18.4
| 19.08
| 18.4
| 19.08
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 2.948641
| 2.912351
| 0.613588
| 0.577298
| -0.040822
| null | 51
|
null |
EX1 Malc#18 Mod 2 - Jieux - Exclusion 1
|
AUAGUACAUGAGGAUCACCCAUGUCAGGAUAUCGGAUGUGACAUGAAAAAAAUGUUAAUGAGAAGGGACUAUAA
| 1.12
|
FMN
|
OFF
| 49.03
| 43.58
| 49.03
| 43.58
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.774598
| 3.892432
| 1.439546
| 1.55738
| 0.113329
| null | 60
|
null |
EX1 Malc#18 Mod 20 - Jieux - Exclusion 1
|
UUGGCACAUGAGGAUCACCCAUGUUAGGAUAUUGUGGCAGAAACAGCUGGGAAACGCACGAGAAGGGACACAUA
| 1.15
|
FMN
|
OFF
| 38.53
| 33.38
| 38.53
| 33.38
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.507957
| 3.651437
| 1.172905
| 1.316385
| 0.139762
| null | 110
|
null |
Usqurilequ
|
UUGCAGUGCGGGUAGGAUAUGUAGGGUGGUACAUGAGGAUCACCCAUGUGUCCACCCUUCGACCGGCAGAAGGGCCUAUCACUGC
| 1.1
|
FMN
|
ON
| 17.08
| 15.57
| 15.57
| 17.08
| 10.33
|
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 2.837908
| 2.745346
| 0.502856
| 0.410294
| 0.09531
| null | 65
|
null |
Quoredinri
|
AAUUGGCUCGCGCAGGAUAUGGAUCAUUCCACAUGAGGAUCACCCAUGUUAAGGAGCCUUUGCAUCCAGAAGGGUGCUGGUCUUU
| 2.83
|
FMN
|
ON
| 41.25
| 14.57
| 14.57
| 41.25
| 10.33
|
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 3.719651
| 2.678965
| 1.384599
| 0.343912
| 1.040277
| null | 69
|
null |
Arraquorso
|
CCGAGUGGCGUACAGGAUAUGUUGCAUGGAACAUGAGGAUCACCCAUGUAUUUGCUCCCGCAUACGCAGAAGGGUGCGUCCUGGG
| 5.57
|
FMN
|
ON
| 141.6
| 25.43
| 25.43
| 141.6
| 10.33
|
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 4.953006
| 3.23593
| 2.617954
| 0.900877
| 1.717395
| null | 80
|
null |
Soteed
|
CAGCGCUGUCGAGAGGAUAUGCGGUGAUGGACAUGAGGAUCACCCAUGUUAGCGAUAGCAUUACGGUAGAAGGCUCUACAGCUGC
| 16.87
|
FMN
|
ON
| 238.93
| 14.17
| 14.17
| 238.93
| 10.33
|
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 5.476171
| 2.651127
| 3.141118
| 0.316075
| 2.825537
| null | 54
|
null |
A
|
GCCCGACAUGAGGAUCACCCAUGUGGGAAACCGCGAGGAUAUCCGGGCCCGAAAGGGCCCGGAGAAGGCGCCGGGC
| 1.14
|
FMN
|
ON
| 12.46
| 10.94
| 10.94
| 12.46
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 2.522524
| 2.392426
| 0.187471
| 0.057374
| 0.131028
| null | 193
|
null |
Ex 3May 59
|
AAUGCGGCAGGAUAUACAUGAGGAUCACCCAUGUAGAUCAGAUAUAUGGUCGAGCCAUGUAGAAGGGCCGCAAA
| 3.58
|
FMN
|
OFF
| 110.18
| 30.78
| 110.18
| 30.78
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.426865
| 4.702115
| 1.091813
| 2.367063
| 1.275363
| null | 91
|
null |
EX4 Malc#39
|
AGGAAGUGAGGAUAUGCAUCAUAUAGUGGACGCUAUAGAAUGUAGAAGGCACAUGAGGAUCACCCAUGUUUAAA
| 0.97
|
FMN
|
OFF
| 29.31
| 30.16
| 29.31
| 30.16
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.406517
| 3.377929
| 1.071464
| 1.042876
| -0.030459
| null | 53
|
null |
Mat - Exclusion 3 - JL mod - D82
|
AAGACUAGAGGAUAUACAUGAGGAUCACCCAUGUAACUGUCAGGUGACUGACGGAAAAGUAGAAGGCUAGUCAA
| 1.2
|
FMN
|
OFF
| 19.98
| 16.62
| 19.98
| 16.62
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.810607
| 2.994732
| 0.475555
| 0.659679
| 0.182322
| null | 51
|
null |
Janelle Amethyst 18 Mod 19 - Jieux - Exclusion 1
|
GGGUAACAUGAGGAUCACCCAUGUGAGGAUAUCCUAGGGAUGGAAGCUCGGCCAACCAGGAGAAGGUACUAAAG
| 1.77
|
FMN
|
OFF
| 131.13
| 73.93
| 131.13
| 73.93
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.303119
| 4.876189
| 1.968066
| 2.541137
| 0.57098
| null | 51
|
null |
Brourd 613 Mod 1- Jieux - Exclusion 1
|
AAAAAACAUGAGGAUCACCCAUGUGAGGAUAUCAGUAUUCAGUCCUCGGAUUGAGUACUGAGAAGGCACAUAAA
| 1.83
|
FMN
|
OFF
| 94.24
| 51.49
| 94.24
| 51.49
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.941388
| 4.545845
| 1.606335
| 2.210792
| 0.604316
| null | 65
|
null |
JR_Exc002_Sub208
|
AAGUUGACAGGAUAUACUUGGGCAACUUAUAUACUAAUAUAACAUGAGGAUCACCCAUGUAGAAGGGUCAGAAA
| 1.34
|
FMN
|
OFF
| 72.46
| 53.99
| 72.46
| 53.99
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.988799
| 4.283035
| 1.653747
| 1.947982
| 0.29267
| null | 51
|
null |
JR_Exc002_Sub201
|
UAGAACCUAGGAUAUACUUGGACCACUAAUGCACAGAUAUAACAUGAGGAUCACCCAUGUAGAAGGAGGAGUAA
| 0.8
|
FMN
|
OFF
| 32.44
| 40.39
| 32.44
| 40.39
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.698582
| 3.479392
| 1.36353
| 1.14434
| -0.223144
| null | 55
|
null |
JR_Exc001_Sub210
|
UUUCCACAUGAGGAUCACCCAUGUCAGGAUAUUAGAUCUAUUUAUACAUAUAAUUAUUUAAGAAGGGACACUAA
| 0.93
|
FMN
|
OFF
| 16.88
| 18.09
| 16.88
| 18.09
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.895359
| 2.826129
| 0.560307
| 0.491077
| -0.072571
| null | 127
|
null |
Design 87: Sub-opt Y
|
AACUGACAUGAGGAUCACCCAUGUCAGGAUAUGACUUGACGAAAUAAAACACGUCAUGUCAGAAGGGACAUGAA
| 0.87
|
FMN
|
OFF
| 15.16
| 17.39
| 15.16
| 17.39
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.855895
| 2.71866
| 0.520843
| 0.383608
| -0.139262
| null | 71
|
null |
JR_Exc003_Sub203
|
AUAGGUCAAGGAUAUACAUGAGGAUCACCCAUGUAAAUAACUCCAUCCAACUCCACAAGUAGAAGGUGAAAUAA
| 0.97
|
FMN
|
OFF
| 16.5
| 16.99
| 16.5
| 16.99
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.832625
| 2.80336
| 0.497573
| 0.468308
| -0.030459
| null | 55
|
null |
Design 24 :P G-U+ 7
|
UCUUGACAUGAGGAUCACCCAUGUCAGGAUAUAGUAGGACAAAUAAAUAAAAGUUCUACUAGAAGGGACGUGGG
| 1.31
|
FMN
|
OFF
| 26.73
| 20.44
| 26.73
| 20.44
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.017494
| 3.285787
| 0.682441
| 0.950734
| 0.270027
| null | 76
|
null |
JR_SS001_Sub014
|
AACAUACAUGAGGAUCACCCAUGUUCCGGCAGGCUAGGAUAUCAAUCGAAAGUGUUAUAAUGAGAAGGAGCAUAAA
| 1.67
|
FMN
|
ON
| 49.05
| 29.39
| 29.39
| 49.05
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.89284
| 3.380654
| 1.557788
| 1.045602
| 0.512824
| null | 54
|
null |
JR_SS001_Sub006
|
AUUAUACAUGAGGAUCACCCAUGUUUUGGUGGGUCAGGAUAUAAAUUGAAUGAGUUUUAGUUAGAAGGGACAUUUA
| 1.32
|
FMN
|
ON
| 56.51
| 42.89
| 42.89
| 56.51
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.034418
| 3.758639
| 1.699365
| 1.423586
| 0.277632
| null | 61
|
null |
JR_SS001_Sub003
|
AAUAUACAUGAGGAUCACCCAUGUUUUGGUGCAUGAGGAUAUAAAAACAAUUACAUAAAGUUAGAAGGCAUGAAUA
| 1.15
|
FMN
|
ON
| 54.94
| 47.9
| 47.9
| 54.94
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.006242
| 3.869116
| 1.671189
| 1.534063
| 0.139762
| null | 63
|
null |
JR_Exc002_Sub010
|
ACUAACGAAGGAUAUACUAACGAAACUAAUGCAUAGAUAAAACAUGAGGAUCACCCAUGUAGAAGGUCGAGACU
| 1.14
|
FMN
|
OFF
| 25.49
| 22.46
| 25.49
| 22.46
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.111736
| 3.238286
| 0.776684
| 0.903234
| 0.131028
| null | 61
|
null |
JR_Exc004_Sub202
|
AACGCGUCAGGAUAUGCCAUAAAUUACCUAAUACAACCAUAGCAGAAGGGACAUGAGGAUCACCCAUGUAAAUA
| 0.78
|
FMN
|
OFF
| 25.19
| 32.14
| 25.19
| 32.14
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.470101
| 3.226447
| 1.135049
| 0.891395
| -0.248461
| null | 66
|
null |
Ex2 Design 123: Not so Super Stable 11
|
AGUAGAUCAGGAUAUACAUGAAAGAUCAAAAUGUCACUACUACAUGAGGAUCACCCAUGUAGAAGGGAUCUACA
| 0.69
|
FMN
|
OFF
| 36.72
| 52.88
| 36.72
| 52.88
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.968025
| 3.603322
| 1.632973
| 1.268269
| -0.371064
| null | 54
|
null |
Exclusion 2.1
|
AAGUAAGGAGGAUAUACGUCAUAGACCGCAAUAUGUCAUAGACAUGAGGAUCACCCAUGUAGAAGGCUUUAACA
| 0.75
|
FMN
|
OFF
| 26.2
| 34.73
| 26.2
| 34.73
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.547604
| 3.265759
| 1.212552
| 0.930707
| -0.287682
| null | 102
|
null |
Design 99 (not really): Pseudoknot J
|
UCAUGACAUGAGGAUCACCCAUGUCAGGAUAUCUACAGAACCUCAUGUAAAAAACUGUAGAGAAGGGAUAUGAA
| 1.13
|
FMN
|
OFF
| 24.96
| 22.03
| 24.96
| 22.03
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.092405
| 3.217275
| 0.757353
| 0.882222
| 0.122218
| null | 54
|
null |
Mod of jnicol
|
AAAGAGACAGGAUAUACAUGGGUGAUAAAAAUCAUGUAAAAACAUGAGGAUCACCCAUGUAGAAGGGUCUCAAA
| 0.85
|
FMN
|
OFF
| 22.78
| 26.87
| 22.78
| 26.87
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.29101
| 3.125883
| 0.955958
| 0.790831
| -0.162519
| null | 138
|
null |
JR_Exc001_Sub011
|
UACAGACAUGAGGAUCACCCAUGUGAGGAUAUCGAUAACAAUAAAAUAAUAUAAACAACGAGAAGGCACAGCAU
| 1.27
|
FMN
|
OFF
| 72.95
| 57.43
| 72.95
| 57.43
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.050567
| 4.289774
| 1.715515
| 1.954722
| 0.239017
| null | 91
|
null |
Exclusion 1.3
|
AAGGGACAUGAGGAUCACCCAUGUGAGGAUAUAUAAAUGUACCCGAUGGGAGUACACAAUAGAAGGCGCGGCUA
| 0.81
|
FMN
|
OFF
| 32.84
| 40.68
| 32.84
| 40.68
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.705737
| 3.491647
| 1.370684
| 1.156595
| -0.210721
| null | 59
|
null |
salish99-Ex1-11
|
GAGAUACAUGAGGAUCACCCAUGUGAGGAUAUCGGUUGGAGGAGGUGGAGGUUGAGUACGAGAAGGCACGGAUC
| 1.13
|
FMN
|
OFF
| 28.33
| 24.97
| 28.33
| 24.97
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.217675
| 3.343921
| 0.882623
| 1.008869
| 0.122218
| null | 74
|
null |
EX3 259: Super Stable 59
|
CAGUCUACAGGAUAUACAUGAGGAUCACCCAUGUUUAUCAACCUUCAGUAAUCCACAUGUAGAAGGGUAGACUG
| 1.09
|
FMN
|
OFF
| 21.42
| 19.73
| 21.42
| 19.73
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.98214
| 3.064325
| 0.647088
| 0.729273
| 0.086178
| null | 216
|
null |
EX3 254: Super Stable 54
|
ACAAAUGGAGGAUAUACAUGAGGAUCACCCAUGUAUAUCCUACAUAUGUGAUUUUUAUGUAGAAGGCCAUUUGA
| 1.05
|
FMN
|
OFF
| 13.39
| 12.78
| 13.39
| 12.78
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.547881
| 2.594508
| 0.212829
| 0.259456
| 0.04879
| null | 94
|
null |
JR_Exc004_Sub313
|
UUUACGUGAGGAUAUGCGAAUAGAACGUAAGACAUACAGACGCAGAAGGCACAUGAGGAUCACCCAUGUGAACC
| 2.02
|
FMN
|
OFF
| 41.37
| 20.5
| 41.37
| 20.5
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.020425
| 3.722556
| 0.685373
| 1.387504
| 0.703098
| null | 60
|
null |
JR_Exc003_Sub313
|
AUGUACCUAGGAUAUACAUGAGGAUCACCCAUGUUCCGGGUGCAAUCAAGUUAAUAUUGUAGAAGGAGGUGAAA
| 1.87
|
FMN
|
OFF
| 31.79
| 16.99
| 31.79
| 16.99
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.832625
| 3.459152
| 0.497573
| 1.124099
| 0.625938
| null | 69
|
null |
JR_Exc003_Sub305
|
AUAGGCCUAGGAUAUACAUGAGGAUCACCCAUGUUAAUACUUCAAUCAUGAUAAACGUGUAGAAGGAGGAAUAA
| 1.01
|
FMN
|
OFF
| 26.08
| 25.81
| 26.08
| 25.81
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.250762
| 3.261169
| 0.91571
| 0.926116
| 0.00995
| null | 72
|
null |
JR_Exc002_Sub313
|
UCGAUGCUAGGAUAUACGUAUACCUCCACCGUUGAUUCCUAACAUGAGGAUCACCCAUGUAGAAGGAGCAUCUA
| 0.99
|
FMN
|
OFF
| 23.58
| 23.78
| 23.58
| 23.78
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.168845
| 3.160399
| 0.833793
| 0.825347
| -0.01005
| null | 132
|
null |
JR_Exc002_Sub306
|
UCGAUCGGAGGAUAUACUAAUACAACUACUGAAGUGUCAAAACAUGAGGAUCACCCAUGUAGAAGGCCGAUAUA
| 1.11
|
FMN
|
OFF
| 24.28
| 21.84
| 24.28
| 21.84
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.083743
| 3.189653
| 0.748691
| 0.854601
| 0.10436
| null | 51
|
null |
JR_Exc002_Sub303
|
UCGAUGCGAGGAUAUACAAGGGCAACUACUGCCGCUAUAUAACAUGAGGAUCACCCAUGUAGAAGGCGCAUAUA
| 1.37
|
FMN
|
OFF
| 30.21
| 22.11
| 30.21
| 22.11
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.09603
| 3.408173
| 0.760978
| 1.073121
| 0.314811
| null | 93
|
null |
Meechl MS2 EX4 62% 1
|
AUAAAGUGAGGAUAUGUAAAAAUAACGAAAGUUAUAAAUAAACAGAAGGCACAUGAGGAUCACCCAUGUCCAAU
| 1.61
|
FMN
|
OFF
| 43.14
| 26.79
| 43.14
| 26.79
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.288029
| 3.764451
| 0.952976
| 1.429398
| 0.476234
| null | 57
|
null |
JR_Exclusion-4 65% 5
|
AGCAUGUUAGGAUAUGCGAAGUCAGGACACACACUGACGAAGCAGAAGGAACAUGAGGAUCACCCAUGUAAGCA
| 0.64
|
FMN
|
OFF
| 45.69
| 71.81
| 45.69
| 71.81
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 4.274024
| 3.821879
| 1.938971
| 1.486827
| -0.446287
| null | 66
|
null |
EX3 225: Super Stable 25
|
AGUCAUACAGGAUAUACAUGAGGAUCACCCAUGUAAAUCCUAAAAAGAAAAACCUCUUGUAGAAGGGUAUGACA
| 1.14
|
FMN
|
OFF
| 16.33
| 14.32
| 16.33
| 14.32
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.661657
| 2.793004
| 0.326605
| 0.457952
| 0.131028
| null | 57
|
null |
Ex2 Design 187: Random 9B
|
AGAUAGUCAGGAUAUACGUGGAUGGAACACUUAUUUCCACUACAUGAGGAUCACCCAUGUAGAAGGGACUAUCA
| 1
|
FMN
|
OFF
| 17.79
| 17.75
| 17.79
| 17.75
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.876386
| 2.878637
| 0.541333
| 0.543584
| 0
| null | 128
|
null |
Ex2 Design 165: Sub-opt 29
|
AGCUGGAGAGGAUAUACGUGAGUGAUAAAAGUCUGAUAACUACAUGAGGAUCACCCAUGUAGAAGGCUCUGGCA
| 0.29
|
FMN
|
OFF
| 19.37
| 66.2
| 19.37
| 66.2
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 4.19268
| 2.963725
| 1.857628
| 0.628673
| -1.237874
| null | 101
|
null |
4736272_48166_3
|
AAAAAACAUGAGGAUCACCCAUGUAAAAAAAAUAGAGGAUAUGGGUGAUCCAAAAAAAAACCAGAAGGCUAAAAAA
| 1.09
|
FMN
|
ON
| 18.17
| 16.63
| 16.63
| 18.17
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 2.899772
| 2.811208
| 0.56472
| 0.476156
| 0.086178
| null | 51
|
null |
4736272_48166_1
|
AAAAAACAUGAGGAUCACCCAUGUAAAAAAAUCACAGGAUAUAAGGUCGCGAAAGCGACCUUAGAAGGGUGAUCCU
| 1
|
FMN
|
ON
| 20.15
| 20.11
| 20.11
| 20.15
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.003204
| 3.001217
| 0.668152
| 0.666165
| 0
| null | 152
|
null |
4736271_48166_1
|
CUCAUGUCAGGAUAUCGUGCAGCUACCGAAAGGUAGCUGCACGAGAAGGGACAUGAGGAUCACCCAUGUAUGAA
| 0.83
|
FMN
|
OFF
| 18.44
| 22.17
| 18.44
| 22.17
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.09874
| 2.914522
| 0.763688
| 0.57947
| -0.18633
| null | 314
|
null |
JR_SS001_Sub312
|
ACUUCACAUGAGGAUCACCCAUGUCAGGCCGGACUAGGAUAUUAUCAACCAGAGUAACCAUAAGAAGGAGUAGGAA
| 0.82
|
FMN
|
ON
| 64.38
| 78.39
| 78.39
| 64.38
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.164803
| 4.361696
| 1.829751
| 2.026644
| -0.198451
| null | 58
|
null |
JR_SS001_Sub706
|
CGUUCACAUGAGGAUCACCCAUGUCAGAUUUGGUCAGGAUAUGGUCUGCUUCCGCUAUUGCCAGAAGGGACUUUUG
| 1.27
|
FMN
|
ON
| 28.93
| 22.71
| 22.71
| 28.93
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 3.364879
| 3.122805
| 1.029827
| 0.787753
| 0.239017
| null | 417
|
null |
JR_Exc004_Sub710
|
ACCCUGUCAGGAUAUCCUGCUGUGCGGCCUCUGUAUUCAAGGGAGAAGGGACAUGAGGAUCACCCAUGUAUGAG
| 1.17
|
FMN
|
OFF
| 47.55
| 40.59
| 47.55
| 40.59
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.703522
| 3.861782
| 1.368469
| 1.52673
| 0.157004
| null | 257
|
null |
Excls4-VII
|
CGUUGGUUAGGAUAUAGCCUCCUGGUGGGAAGGCCGGGUGGCUAGAAGGAACAUGAGGAUCACCCAUGUAUGGA
| 0.53
|
FMN
|
OFF
| 33.3
| 62.61
| 33.3
| 62.61
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 4.136925
| 3.505557
| 1.801873
| 1.170505
| -0.634878
| null | 320
|
null |
JR_Exc003_Sub711
|
AUCGGGAGAGGAUAUACAUGAGGAUCACCCAUGUUGGGAACAUCGGUUUGUUAGUUUCGUAGAAGGCUCGGGCG
| 1.31
|
FMN
|
OFF
| 59.58
| 45.49
| 59.58
| 45.49
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.817493
| 4.08732
| 1.48244
| 1.752268
| 0.270027
| null | 133
|
null |
JR_Exc003_Sub708
|
AUCUUGAGAGGAUAUACAUGAGGAUCACCCAUGUUUCUAACACCAUGCGGUCAUUUGCGUAGAAGGCUCGUCCG
| 1.71
|
FMN
|
OFF
| 34.11
| 19.91
| 34.11
| 19.91
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.991222
| 3.529591
| 0.65617
| 1.194538
| 0.536493
| null | 335
|
null |
Excls4-III
|
AAAAGGUCAGGAUAUGCCCUCCUGGUGGAAAAGCCUGGUGGGCAGAAGGGACAUGAGGAUCACCCAUGUAAAAA
| 1.34
|
FMN
|
OFF
| 81.78
| 60.84
| 81.78
| 60.84
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 4.108247
| 4.404033
| 1.773195
| 2.06898
| 0.29267
| null | 63
|
null |
JR_Exc004_Sub701
|
AAAUUGUCAGGAUAUCCAACUAUACGAAAUAUAUAUACACAGGAGAAGGGACAUGAGGAUCACCCAUGUUUGAA
| 0.78
|
FMN
|
OFF
| 19.14
| 24.57
| 19.14
| 24.57
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.201526
| 2.95178
| 0.866474
| 0.616728
| -0.248461
| null | 54
|
null |
JR_Exc001_Sub710
|
AUUCAACAUGAGGAUCACCCAUGUGAGGAUAUCGUAUACUACUGUUGCAAUACUUAGACGAGAAGGCACACCGU
| 1.33
|
FMN
|
OFF
| 25.06
| 18.88
| 25.06
| 18.88
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.938103
| 3.221273
| 0.603051
| 0.886221
| 0.285179
| null | 161
|
null |
Exclusion 4.7 (GU closing FMN)
|
CCUAUGUGAGGAUAUAGCCACAUUACGAAUAAGUAGUGUGGCUAGAAGGUACAUGAGGAUCACCCAUGUAUGGG
| 0.5
|
FMN
|
OFF
| 84.08
| 167.39
| 84.08
| 167.39
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 5.120326
| 4.431769
| 2.785274
| 2.096716
| -0.693147
| null | 67
|
null |
Exclusion 4.1h (Exclusion4 -cac2 / UU mismatch, GC closing FMN, FMN+ strong)
|
CUCUUGUCAGGAUAUGCUGCUCGUCACGAAAGUGAUGAGUAGCAGAAGGGACAUGAGGAUCACCCAUGUAAAUA
| 0.33
|
FMN
|
OFF
| 17.48
| 53.74
| 17.48
| 53.74
| 10.33
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.984158
| 2.861057
| 1.649105
| 0.526005
| -1.108663
| null | 55
|
null |
JR_Exc001_Sub1110
|
AAUUAACAUGAGGAUCACCCAUGUGAGGAUAUGGUAUUACUUGGACAGCUAUGAUCUACCAGAAGGCACAUCUA
| 1.84
|
FMN
|
OFF
| 44.76
| 24.37
| 44.76
| 24.37
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.193353
| 3.801315
| 0.858301
| 1.466263
| 0.609766
| null | 136
|
null |
JR_SS001_Sub1004
|
CGAGUACAUGAGGAUCACCCAUGUUAUGAAUUGUCAGGAUAUGGGUAUUGGUGACAUGCGCCAGAAGGGACGUCUG
| 1.88
|
FMN
|
ON
| 232.44
| 123.7
| 123.7
| 232.44
| 10.33
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 5.448632
| 4.817859
| 3.11358
| 2.482807
| 0.631272
| null | 171
|
null |
JR_Exc003-Sub905
|
AGAAUUGUAGGAUAUACAUGAGGAUCACCCAUGUGGGAGGUGGAGCAUACAAGACGAGGUAGAAGGACAACGAC
| 1
|
FMN
|
OFF
| 91.92
| 92.3
| 91.92
| 92.3
| 10.33
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.525044
| 4.520919
| 2.189992
| 2.185866
| 0
| null | 65
|
null |
JR_Exc002_Sub905
|
UACGUAUGAGGAUAUACAAACAGAAAAAUCAGACGUAACUGACAUGAGGAUCACCCAUGUAGAAGGCAUAUACA
| 0.67
|
FMN
|
OFF
| 18.62
| 27.73
| 18.62
| 27.73
| 10.33
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.322515
| 2.924236
| 0.987463
| 0.589184
| -0.400478
| null | 68
|
null |
JR_EXc001_Sub803
|
UUAGAACAUGAGGAUCACCCAUGUGAGGAUAUGCAAUACUAAUAUUAAGAUAAUUAUAGCAGAAGGCACGUAGU
| 1.39
|
FMN
|
OFF
| 47.69
| 34.34
| 47.69
| 34.34
| 10.33
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.536311
| 3.864722
| 1.201259
| 1.529669
| 0.329304
| null | 60
|
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