Search is not available for this dataset
id
float64 286
2.87k
⌀ | design
stringlengths 1
92
⌀ | sequence
stringlengths 74
86
| activation_ratio
float64 0.02
60
| ligand
stringclasses 3
values | switch
stringclasses 2
values | kd_off
float64 2.54
1.9k
| kd_on
float64 2.53
1.53k
| kd_fmn
float64 8.14
1.7k
⌀ | kd_no_fmn
float64 8.17
1.72k
⌀ | min_kd_val
float64 2.53
10.3
| ms2_aptamer
stringclasses 128
values | lig_aptamer
stringclasses 59
values | ms2_lig_aptamer
stringclasses 406
values | log_kd_nolig
float64 0.93
7.45
| log_kd_lig
float64 0.93
7.55
| log_kd_nolig_scaled
float64 0
6.43
| log_kd_lig_scaled
float64 -0.16
5.98
| log_AR
float64 -3.72
4.09
| folding_subscore
float64 4.86
30
⌀ | num_clusters
float64 51
930
⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
null |
JR_Ex4_Sub066
|
AGGUAGUCAGGAUAUUAGUGGUAGAGGGAUAACUUUAUUGUUGAGAAGGGACAUGAGGAUCACCCAUGUUUUGU
| 1.2355
|
FMN
|
OFF
| 32.445513
| 26.261045
| 32.445513
| 26.261045
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.268087
| 3.479562
| 1.091164
| 1.30264
| 0.211476
| null | 75
|
null |
JR_Ex3_Sub060
|
GCGUACUGAGGAUAUACAUGAGGAUCACCCAUGUGACACAGCGUUUAGUGAUGAAUUUGUAGAAGGCAGUAGGC
| 1.495137
|
FMN
|
OFF
| 218.84106
| 146.368595
| 218.84106
| 146.368595
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.986128
| 5.388346
| 2.809206
| 3.211423
| 0.402218
| null | 78
|
null |
JR_Ex1_Sub072
|
GGAAAACAUGAGGAUCACCCAUGUGAGGAUAUGAGCGUCUAGUUGAGAGAUUGGACGCUCAGAAGGCACAUGCC
| 8.669711
|
FMN
|
OFF
| 247.373402
| 28.533061
| 247.373402
| 28.533061
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.351063
| 5.510899
| 1.174141
| 3.333977
| 2.159835
| null | 85
|
null |
EX6 #20
|
AAAUAGCUAGAGGAUAUCGGAUAGGAUUUACUACGAGAAGGUUAGACAUGAGGAUCACCCAUGUUCUGUUGGGA
| 0.944996
|
FMN
|
OFF
| 39.237679
| 41.521512
| 39.237679
| 41.521512
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.726212
| 3.669637
| 1.549289
| 1.492715
| -0.056574
| null | 70
|
null |
Beusen
|
AAAUACAGAGGAUAUGUACGAAUUGACAUGAGGAUCACCCAUGUGACUUCGUGCACUUUGACAGAAGGCUGGGAAU
| 1.951946
|
FMN
|
OFF
| 32.739343
| 16.772665
| 32.739343
| 16.772665
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.81975
| 3.488578
| 0.642828
| 1.311655
| 0.668827
| null | 62
|
null |
EX6 #48
|
AAAUCGGUAGAGGAUAUUGUACAGGAAACGGUGCGAGAAGGUUGCACAUGAGGAUCACCCAUGUUUAGUUGCGA
| 0.972098
|
FMN
|
OFF
| 33.964142
| 34.939022
| 33.964142
| 34.939022
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.553604
| 3.525305
| 1.376682
| 1.348383
| -0.028299
| null | 57
|
null |
EX6 #73
|
AACUCUGAGAAGGAUAUUCAAUGGGAAACGAUGGAAGAAGGUUUCACAUGAGGAUCACCCAUGUCGAAUAGUGA
| 0.888715
|
FMN
|
OFF
| 63.935052
| 71.940969
| 63.935052
| 71.940969
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.275846
| 4.157868
| 2.098924
| 1.980945
| -0.117978
| null | 54
|
null |
EX6 #86
|
ACCUAUGAGGAGGAUAUACGGUGCGAAAGGAAGGUAGAAGGCUUCACAUGAGGAUCACCCAUGUCUAUAAGCGA
| 0.955907
|
FMN
|
OFF
| 29.507451
| 30.868525
| 29.507451
| 30.868525
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.429737
| 3.384643
| 1.252815
| 1.20772
| -0.045094
| null | 58
|
null |
Soesleatte
|
AAUUACAGAGGAUAUGCGCGGUAAAACAUGAGGAUCACCCAUGUGAUACCUGCAUGACCGGCAGAAGGCUGCGUUU
| 4.869668
|
FMN
|
OFF
| 108.499446
| 22.280664
| 108.499446
| 22.280664
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.103719
| 4.686745
| 0.926797
| 2.509823
| 1.583026
| null | 74
|
null |
JL-BMX4-4.47 ViennaUCT mod
|
AUUCCUAGUGUUAGGAUAUGCGACGGGUGACCGUUGCAGAAGGAACAUGAGGAUCACCCAUGUUUAAUAAAAUC
| 5.167263
|
FMN
|
OFF
| 80.734569
| 15.624241
| 80.734569
| 15.624241
| 8.819122
|
............................................(((((x((xxxx)))))))...........
|
...........(xxxxxx(..................)xxxxx)..............................
|
...........(xxxxxx(..................)xxxxx)(((((x((xxxx)))))))...........
| 2.748824
| 4.391167
| 0.571901
| 2.214245
| 1.642343
| null | 61
|
null |
lam1
|
UCGUGUAUAGAGGAUAUAUUAUUUUUUUUAACAAUAGAAGGCUAAACAUGAGGAUCACCCAUGUAUUUUUUUUU
| 1.397844
|
FMN
|
OFF
| 43.94793
| 31.439799
| 43.94793
| 31.439799
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.448075
| 3.783006
| 1.271152
| 1.606083
| 0.334931
| null | 102
|
null |
Quesusdi
|
AUAAAGCGAGGAUAUCGCGCGGAGUACAUGAGGAUCACCCAUGUGGUCCGCAGUCCUGCGCGAGAAGGCGCAUUCC
| 0.393303
|
FMN
|
OFF
| 54.190957
| 137.78426
| 54.190957
| 137.78426
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 4.925689
| 3.992514
| 2.748767
| 1.815592
| -0.933175
| null | 82
|
null |
JR_Ex6_Sub074
|
UUACGGAUAGAGGAUAUAUUAAGGAAAGUUUCGAUAGAAGGCUAGACAUGAGGAUCACCCAUGUAUAUUGGGAU
| 1.149671
|
FMN
|
OFF
| 150.834717
| 131.198117
| 150.834717
| 131.198117
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.876709
| 5.016185
| 2.699786
| 2.839262
| 0.139476
| null | 63
|
null |
E6/4-B1
|
GGCCGUAAUAAGGAUAUCACUAGCUUCGGCUAGUGAGAAGGUAUUACAUGAGGAUCACCCAUGUGGUCAGGCCA
| 2.61786
|
FMN
|
OFF
| 730.143117
| 278.908369
| 730.143117
| 278.908369
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 5.630883
| 6.593241
| 3.453961
| 4.416318
| 0.962357
| null | 53
|
null |
EX3 #75
|
AGCGAGGUAGGAUAUACAUGAGGAUCACCCAUGUGCUUGCAUGGCGUGGAACAUCGUAGUAGAAGGGCCGCGCC
| 1.967755
|
FMN
|
OFF
| 40.208322
| 20.433598
| 40.208322
| 20.433598
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.017181
| 3.694074
| 0.840258
| 1.517152
| 0.676893
| null | 56
|
null |
אותו מדינה אחת-16
|
CUCAAACAUGAGGAUCACCCAUGUGUUGUCGUGGGAGGAUAUCCCAGUUCGGUGGCGUCGGGAGAAGGCCUAUGUC
| 2.177184
|
FMN
|
ON
| 140.854729
| 64.695839
| 64.695839
| 140.854729
| 8.819122
|
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.947729
| 4.169697
| 2.770807
| 1.992775
| 0.778032
| null | 81
|
null |
Exclusion 6 - B - 10:d
|
UCAAGUAUGUAGGAUAUCGAUGUCUACGGACAUCGAGAAGGACGUACAUGAGGAUCACCCAUGUAACUUGCAUG
| 0.404848
|
FMN
|
OFF
| 187.752347
| 463.760139
| 187.752347
| 463.760139
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 6.139367
| 5.235124
| 3.962445
| 3.058201
| -0.904244
| null | 82
|
null |
E1/1-A1
|
AGAUCACAUGAGGAUCACCCAUGUCAGGAUAUCGACUGAACAGCUUCGGCUGUUCAGUCGAGAAGGGACAAUUA
| 3.083532
|
FMN
|
OFF
| 859.598513
| 278.770752
| 859.598513
| 278.770752
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 5.63039
| 6.756465
| 3.453467
| 4.579543
| 1.126076
| null | 85
|
null |
jun14#1
|
CCGCCAUAAGUCAGGAUAUUCUUUAAGUUGUUGGAGAAGAAGGGACAUGAGGAUCACCCAUGUAAUAGGCCUCA
| 0.710413
|
FMN
|
OFF
| 597.966096
| 841.71665
| 597.966096
| 841.71665
| 8.819122
|
............................................(((((x((xxxx)))))))...........
|
...........(xxxxxx(..................)xxxxx)..............................
|
...........(xxxxxx(..................)xxxxx)(((((x((xxxx)))))))...........
| 6.735443
| 6.393534
| 4.558521
| 4.216612
| -0.341909
| null | 85
|
null |
MS2A
|
CGGGCACAUGAGGAUCACCCAUGUCAGGAUAUCGGCCGGCGGCCGCCGGGCCGCCGGCCGAGAAGGGACGCCCG
| 1.139982
|
FMN
|
OFF
| 18.714013
| 16.41606
| 18.714013
| 16.41606
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.79826
| 2.929273
| 0.621338
| 0.75235
| 0.131012
| null | 108
|
null |
Teveagees
|
GCCUCACAUGAGGAUCACCCAUGUCAGGAUAUCUCAGCCUCACAUCAAACAAGGCUUCAGAGAAGGGACGUAAA
| 2.069627
|
FMN
|
OFF
| 77.380647
| 37.388685
| 77.380647
| 37.388685
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.621368
| 4.348737
| 1.444446
| 2.171814
| 0.727369
| null | 52
|
null |
E1/9-B2
|
UGGUCACAUGAGGAUCACCCAUGUCAGGAUAUCUACAUUGAAGCCUCGGCUUCAAUGUAGAGAAGGGAUAUAAU
| 2.262793
|
FMN
|
OFF
| 148.114205
| 65.456373
| 148.114205
| 65.456373
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.181384
| 4.997984
| 2.004462
| 2.821061
| 0.8166
| null | 107
|
null |
Enleenbiqu
|
GCCUCACAUGAGGAUCACCCAUGUCAGGAUAUACCCAUCCGGCGCAAUUGCAGCCGUAGUAGAAGGGACAUGCA
| 2.163239
|
FMN
|
OFF
| 45.843802
| 21.192201
| 45.843802
| 21.192201
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.053633
| 3.82524
| 0.876711
| 1.648318
| 0.771607
| null | 127
|
null |
Inedri
|
AAAAUACAUGAGGAUCACCCAUGUUAGGAUAUCCAAGGCCUGACCCUCAAGGUCAGGCGGAGAAGGGAUGUGGU
| 1.01741
|
FMN
|
OFF
| 51.295345
| 50.417586
| 51.295345
| 50.417586
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.92034
| 3.9376
| 1.743418
| 1.760678
| 0.01726
| null | 86
|
null |
Lagean
|
AGAAAACAUGAGGAUCACCCAUGUCAGGAUAUCUCCAAGGCUUAACAUCCAGCCCUGCAGAGAAGGGACGGGUG
| 2.565847
|
FMN
|
OFF
| 225.49165
| 87.881951
| 225.49165
| 87.881951
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.475994
| 5.418283
| 2.299072
| 3.241361
| 0.942289
| null | 56
|
null |
Lexetianla
|
AAGUAACAUGAGGAUCACCCAUGUUAGGAUAUCUCGGCCACAGGAUCGCUGUGAAGCCAGAGAAGGAGCGGGUG
| 1.068561
|
FMN
|
OFF
| 186.473755
| 174.50917
| 186.473755
| 174.50917
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 5.161977
| 5.228291
| 2.985055
| 3.051368
| 0.066313
| null | 62
|
null |
Diedesa
|
CCCUCACAUGAGGAUCACCCAUGUCAGGAUAUCCAGCCCUACUAUAAAGCGUCUGGCGGGAGAAGGGACAGGAU
| 1.362485
|
FMN
|
OFF
| 28.501453
| 20.918726
| 28.501453
| 20.918726
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.040645
| 3.349955
| 0.863722
| 1.173033
| 0.30931
| null | 106
|
null |
Riarve
|
UUACAGCACGGGUAGGAUAUGUAGGGUGGUACAUGAGGAUCACCCAUGUAUCCACCCUUCUAACGGCAGAAGGGCCUGUCGCUGC
| 1.520379
|
FMN
|
ON
| 31.77796
| 20.901343
| 20.901343
| 31.77796
| 8.819122
|
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 3.458773
| 3.039813
| 1.281851
| 0.862891
| 0.41896
| null | 79
|
null |
Ex 3 Optimization 2
|
GGCCGGGCAGGAUAUACAUGAGGAUCACCCAUGUAUAUCCUUCAGCAUGGAUCCUCAUGUAGAAGGGCCCGGCC
| 0.900916
|
FMN
|
OFF
| 11.928872
| 13.240829
| 11.928872
| 13.240829
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.583305
| 2.478962
| 0.406383
| 0.302039
| -0.104343
| null | 65
|
null |
E2/6-D2
|
UCUGGAGCAGGAUAUGCAUUCGUGCUUCGGCACGUAAGGUCACAUGAGGAUCACCCAUGUAGAAGGGCUCCAGA
| 1.768417
|
FMN
|
OFF
| 34.008658
| 19.231127
| 34.008658
| 19.231127
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.95653
| 3.526615
| 0.779608
| 1.349693
| 0.570085
| null | 64
|
null |
JR_Exc1_Sub017
|
GACCUACAUGAGGAUCACCCAUGUGAGGAUAUAUUGUUAUUUUUAAUAUUUUUUAGUGGUAGAAGGCGCGUGAU
| 0.94002
|
FMN
|
OFF
| 17.275222
| 18.377513
| 17.275222
| 18.377513
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.911128
| 2.849273
| 0.734205
| 0.672351
| -0.061855
| null | 126
|
null |
JR_Exc1_Sub028
|
AACUCACAUGAGGAUCACCCAUGUGAGGAUAUAUAAAUAUAUAUGUUAUUAUAUAUUUAUAGAAGGCGCGUGAU
| 1.063467
|
FMN
|
OFF
| 46.852936
| 44.056791
| 46.852936
| 44.056791
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.78548
| 3.847014
| 1.608557
| 1.670091
| 0.061534
| null | 65
|
null |
EX3 #10
|
AUAUAGCGAGGAUAUACAUGAGGAUCACCCAUGUGGUAGUAGAUACGGUAGAGCUAGUGUAGAAGGCGCUAUGA
| 0.345797
|
FMN
|
OFF
| 160.12241
| 463.053062
| 160.12241
| 463.053062
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.137842
| 5.075939
| 3.960919
| 2.899016
| -1.061903
| null | 55
|
null |
EX2 #68
|
UCUGUUCAAGGAUAUGCGUAAUGUGUUACGGCACGAGGUCUACAUGAGGAUCACCCAUGUAGAAGGUGAUCAGA
| 1.030401
|
FMN
|
OFF
| 22.164486
| 21.510553
| 22.164486
| 21.510553
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.068544
| 3.098491
| 0.891621
| 0.921569
| 0.029948
| null | 87
|
null |
JR_Ex2_Sub024
|
UCCUGGCGAGGAUAUACAAUGUUUUUCGCGUGUAGUUGGAAACAUGAGGAUCACCCAUGUAGAAGGUGCUACUG
| 0.784344
|
FMN
|
OFF
| 25.559579
| 32.587201
| 25.559579
| 32.587201
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.48392
| 3.241012
| 1.306997
| 1.06409
| -0.242907
| null | 65
|
null |
Maesorreat
|
AACAUGUGAGGAUAUGAGAACAGCCGGGAGGGCUGUGUAAAUUAGAAGGCACAUGAGGAUCACCCAUGUGACCU
| 1.528224
|
FMN
|
OFF
| 27.751487
| 18.159311
| 27.751487
| 18.159311
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 2.899183
| 3.323289
| 0.722261
| 1.146367
| 0.424106
| null | 72
|
null |
EX3 #52
|
GCGCUGCGAGGAUAUACAUGAGGAUCACCCAUGUGUCGGCAGCCAUGCUAGUACAAAUGUAGAAGGCGCGUAAA
| 1.060789
|
FMN
|
OFF
| 17.834991
| 16.812946
| 17.834991
| 16.812946
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.822149
| 2.881162
| 0.645227
| 0.70424
| 0.059013
| null | 80
|
null |
Artearat
|
CUCGUGUUAGGAUAUCGUGGCUGGGCUGGGACGUCCGAUCGCGAGAAGGGACAUGAGGAUCACCCAUGUAAAAC
| 2.341403
|
FMN
|
OFF
| 86.01184
| 36.735169
| 86.01184
| 36.735169
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.603735
| 4.454485
| 1.426812
| 2.277563
| 0.85075
| null | 60
|
null |
Arerite
|
CUUCUGUCAGGAUAUGCGAAUCACCACUGGGUCAGUGGUGAGCAGAAGGGACAUGAGGAUCACCCAUGUAAAGU
| 4.659434
|
FMN
|
OFF
| 169.269056
| 36.328244
| 169.269056
| 36.328244
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.592596
| 5.131489
| 1.415673
| 2.954567
| 1.538894
| null | 70
|
null |
Biesce
|
CCCAUGUUAGGAUAUAUGGAAGGGCGGACGGGCGCCCUUAGGUAGAAGGAACAUGAGGAUCACCCAUGUAAUAA
| 0.942851
|
FMN
|
OFF
| 161.033422
| 170.794088
| 161.033422
| 170.794088
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 5.140459
| 5.081612
| 2.963536
| 2.90469
| -0.058847
| null | 52
|
null |
Teatat
|
CUCAUGUAAGGAUAUCUACGCGCUAAGGUGCGUCUAUCACAAGAGAAGGUACAUGAGGAUCACCCAUGUAAAGA
| 1.23771
|
FMN
|
OFF
| 127.394421
| 102.927498
| 127.394421
| 102.927498
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 4.634025
| 4.847288
| 2.457103
| 2.670366
| 0.213263
| null | 56
|
null |
E3/7-A4
|
UCUGGUCGAGGAUAUACAUGAGGAUCACCCAUGUUGAUCAAGCGACUUCGGUCGCAAUGUAGAAGGCGACCAGA
| 0.290239
|
FMN
|
OFF
| 181.880058
| 626.656552
| 181.880058
| 626.656552
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.440399
| 5.203347
| 4.263476
| 3.026425
| -1.237051
| null | 79
|
null |
E4/4-B1
|
AUAAUGUGAGGAUAUCAGUAAGAAUGCUUCGGCAUUCUUACUGAGAAGGCACAUGAGGAUCACCCAUGUGAUUA
| 4.80337
|
FMN
|
OFF
| 963.99913
| 200.692244
| 963.99913
| 200.692244
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 5.301773
| 6.87109
| 3.12485
| 4.694168
| 1.569318
| null | 55
|
null |
E4/9-B1
|
AUAAUGUAAGGAUAUCAGUCGUAAUUAAUUUAAUUAUCGACUGAGAAGGUACAUGAGGAUCACCCAUGUGGUCA
| 0.11168
|
FMN
|
OFF
| 102.318845
| 916.179167
| 102.318845
| 916.179167
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 6.820212
| 4.628094
| 4.64329
| 2.451172
| -2.192118
| null | 78
|
null |
E3/2-D1
|
ACAGGUGCAGGAUAUACAUGAGGAUCACCCAUGUGAUUAGCAGUCCUCGGACUGCAAUGUAGAAGGGCACCUGU
| 3.413211
|
FMN
|
OFF
| 1,116.604327
| 327.141932
| 1,116.604327
| 327.141932
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 5.790394
| 7.018048
| 3.613472
| 4.841125
| 1.227653
| null | 56
|
null |
Ditexein
|
GGUCAGCUAGGAUAUACAUGAGGAUCACCCAUGUACUGACCCAUGCGGGAGUCCGCAUGUAGAAGGAGCAAAAU
| 1.078431
|
FMN
|
OFF
| 22.567786
| 20.926508
| 22.567786
| 20.926508
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.041017
| 3.116524
| 0.864094
| 0.939601
| 0.075507
| null | 65
|
null |
Usmarexe
|
CUGUUUGUAGGAUAUACAUGCGGAACCCUCUUCAUGGAAAGACAUGAGGAUCACCCAUGUAGAAGGAUGAAGAG
| 0.908048
|
FMN
|
OFF
| 17.912911
| 19.726836
| 17.912911
| 19.726836
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.98198
| 2.885522
| 0.805058
| 0.708599
| -0.096458
| null | 52
|
null |
Oninerisqu
|
UAGCCACAAGGAUAUACAUGAGGAUCACCCAUGUUUCCAGGAUGCCCUCUCAUGGGUUGUAGAAGGUGUCGGCG
| 1.132946
|
FMN
|
OFF
| 17.875866
| 15.778217
| 17.875866
| 15.778217
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.75863
| 2.883452
| 0.581708
| 0.706529
| 0.124821
| null | 133
|
null |
Veatonso
|
AACAAGCAAGGAUAUACAUGAGGAUCACCCAUGUCGUCUAAACGUACAUGCUACUCUUGUAGAAGGUGCAAAAU
| 4.15123
|
FMN
|
OFF
| 536.733092
| 129.29496
| 536.733092
| 129.29496
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.862096
| 6.285501
| 2.685174
| 4.108579
| 1.423405
| null | 54
|
null |
E5/5-A2
|
UGCAGACGAGGAUAUGAUCAAUAAUACAUGAGGAUCACCCAUGUAAUACUGAUCCAUGGAUCAGAAGGCGUCUGCA
| 1.373147
|
FMN
|
OFF
| 22.951455
| 16.714496
| 22.951455
| 16.714496
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.816276
| 3.133381
| 0.639354
| 0.956459
| 0.317105
| null | 53
|
null |
EX2 #13
|
GAAUAGCGAGGAUAUGCAAUGAAGAUAGUACGAUAUGGCUGACAUGAGGAUCACCCAUGUAGAAGGCGCUGAUC
| 0.891743
|
FMN
|
OFF
| 39.94547
| 44.794831
| 39.94547
| 44.794831
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.802093
| 3.687515
| 1.62517
| 1.510593
| -0.114577
| null | 51
|
null |
Mavequis
|
ACCACGGGAGGAUAUACAUGAGGAUCACCCAUGUCAACUCCACGUGCCCACGUCCUCUGUAGAAGGCCCUACAU
| 1.518822
|
FMN
|
OFF
| 24.266716
| 15.977323
| 24.266716
| 15.977323
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.77117
| 3.189106
| 0.594248
| 1.012183
| 0.417935
| null | 70
|
null |
Eddige
|
GAAAAGCGAGGAUAUACAUGAGGAUCACCCAUGUGUUGGGUGCGUUGGCUAGUCGUCUGUAGAAGGCGCACAAA
| 0.515077
|
FMN
|
OFF
| 465.655061
| 904.04911
| 465.655061
| 904.04911
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.806884
| 6.143445
| 4.629961
| 3.966523
| -0.663439
| null | 83
|
null |
Orveenle
|
AGGGUAGUAGGAUAUACAUGAGGAUCACCCAUGUUUCCUUUACGUGACUGGUCCUAGUGUAGAAGGGCUAGCAC
| 0.936604
|
FMN
|
OFF
| 14.838121
| 15.842474
| 14.838121
| 15.842474
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.762695
| 2.6972
| 0.585772
| 0.520277
| -0.065495
| null | 164
|
null |
Geleatvees
|
AACGUCGAAGGAUAUACAUGAGGAUCACCCAUGUGGGACCUGUAGUCUCACCCAUCGUGUAGAAGGUUGAGGCA
| 0.922334
|
FMN
|
OFF
| 29.73223
| 32.235844
| 29.73223
| 32.235844
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.473079
| 3.392232
| 1.296157
| 1.215309
| -0.080847
| null | 69
|
null |
EX1 #24
|
ACCUCACAUGAGGAUCACCCAUGUCAGGAUAUCUUUUAAAACAGCAAUCCUGUCGCUGAGAGAAGGGACAUUAA
| 1.291677
|
FMN
|
OFF
| 35.636618
| 27.58942
| 35.636618
| 27.58942
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.317432
| 3.573374
| 1.14051
| 1.396451
| 0.255941
| null | 87
|
null |
EX1 #60
|
AGAUAACAUGAGGAUCACCCAUGUGAGGAUAUUUACCCAAGAGCUUCGGCUCUCAGGUGGAGAAGGCACGUUGA
| 1.496023
|
FMN
|
OFF
| 76.758987
| 51.308712
| 76.758987
| 51.308712
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.937861
| 4.34067
| 1.760938
| 2.163748
| 0.40281
| null | 58
|
null |
EX1 #67
|
GUUUGACAUGAGGAUCACCCAUGUAAGGAUAUACGAGUAGCUGCUAGGUAGUUAGUAUGUAGAAGGUGCGUGUU
| 0.952995
|
FMN
|
OFF
| 62.630806
| 65.719971
| 62.630806
| 65.719971
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.185403
| 4.137257
| 2.008481
| 1.960335
| -0.048146
| null | 56
|
null |
EX2 A.9
|
AAACACGGAGGAUAUACAGGUUCGGGAAACCGAACCGGCUGACAUGAGGAUCACCCAUGUAGAAGGCCGAAAUA
| 2.36957
|
FMN
|
OFF
| 45.82174
| 19.337575
| 45.82174
| 19.337575
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.96205
| 3.824759
| 0.785128
| 1.647836
| 0.862709
| null | 60
|
null |
salish99_ex3_r4_015
|
GGUUGGCGAGGAUAUACAUGAGGAUCACCCAUGUGGUCCUGUGGCUGAUCUUGCCUUUGUAGAAGGCGCAAAUC
| 2.042622
|
FMN
|
OFF
| 37.824115
| 18.517435
| 37.824115
| 18.517435
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.918713
| 3.632947
| 0.74179
| 1.456025
| 0.714234
| null | 93
|
null |
EX6 C.22
|
CGUUGUGAAGAGGAUAUCCAACAAAGUUGUCAAGGAGAAGGCUUCACAUGAGGAUCACCCAUGUUAUGCCUUAU
| 4.404687
|
FMN
|
OFF
| 80.205999
| 18.20924
| 80.205999
| 18.20924
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.901929
| 4.384598
| 0.725007
| 2.207676
| 1.482669
| null | 70
|
null |
EX6 C.27
|
CCUCUGUCCGAGGAUAUGAGGUUAACGUGACCGUCAGAAGGCGGAACAUGAGGAUCACCCAUGUUUUGCGCAUG
| 1.537137
|
FMN
|
OFF
| 68.020324
| 44.251315
| 68.020324
| 44.251315
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.789885
| 4.219807
| 1.612963
| 2.042884
| 0.429921
| null | 155
|
null |
jl-ex1-4.61 ViennaUCT mod
|
AUCCUACAUGAGGAUCACCCAUGUCAGGAUAUCCAAGAAAUGUGGCCGUAUCGGCCACGGAGAAGGGACGGGUG
| 1.518996
|
FMN
|
OFF
| 60.782522
| 40.014932
| 60.782522
| 40.014932
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.689253
| 4.107302
| 1.51233
| 1.93038
| 0.41805
| null | 77
|
null |
Exclusion 5 (FMN-MS2 slide v.2)
|
GGUGAAGCAGGAUAUGUAUCGAUAUACAUGAGGAUCACCCAUGUCAUGUUCGAAUCGCAUAUAGAAGGGCUUCACC
| 1.243999
|
FMN
|
OFF
| 16.692797
| 13.418657
| 16.692797
| 13.418657
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.596646
| 2.814977
| 0.419724
| 0.638055
| 0.218331
| null | 97
|
null |
-27.4, -25.5 kcal, A 28% 1bis and 1bis
|
GCUUGAGCAGGAUAUACAAGCUUGAGCUGAAAAGUUCGAGUACAUGAGGAUCACCCAUGUAGAAGGGUUCGAGU
| 1.176771
|
FMN
|
OFF
| 32.313656
| 27.459599
| 32.313656
| 27.459599
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.312716
| 3.47549
| 1.135793
| 1.298568
| 0.162774
| null | 64
|
null |
-49.2, -46.6 kcal, 18% A
|
GGCCCGGGAGGAUAUACAUGAGGAUCACCCAUGUGCGGGCCCGGGAUCCCGGGCCCGUGUAGAAGGCCCGGGCC
| 1.22321
|
FMN
|
OFF
| 16.456975
| 13.45393
| 16.456975
| 13.45393
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.599271
| 2.800749
| 0.422349
| 0.623827
| 0.201478
| null | 136
|
null |
-24.9, -22.3 kcal, 26% A, 3 , 3 bis
|
GCUUCGGCAGGAUAUACAUGAGGAUCACCCAUGUUGAAGUUGAAGAUCUUCGGCUUCGGUAGAAGGGUUGAAGU
| 0.844578
|
FMN
|
OFF
| 32.103687
| 38.011496
| 32.103687
| 38.011496
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.637889
| 3.468971
| 1.460966
| 1.292049
| -0.168918
| null | 56
|
null |
Exclusion 5 - Mod Ex.5 B.5
|
AUGACUCUAGGAUAUUAGCGGGCCUACAUGAGGAUCACCCAUGUCGUGUCGCGGGUAUGCUGAGAAGGAGAGCACA
| 1.256409
|
FMN
|
OFF
| 17.903141
| 14.249458
| 17.903141
| 14.249458
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.656719
| 2.884976
| 0.479797
| 0.708054
| 0.228257
| null | 84
|
null |
jl-ex1-4.70 ViennaUCT mod
|
ACCUCACAUGAGGAUCACCCAUGUAAGGAUAUCUUCGCUUUGACGUUGUUCUAUGCGAAGAGAAGGUACACGGC
| 3.901724
|
FMN
|
OFF
| 110.520461
| 28.326059
| 110.520461
| 28.326059
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.343782
| 4.705201
| 1.16686
| 2.528278
| 1.361418
| null | 68
|
null |
Exclusion 3 S2
|
GCGAUGUUAGGAUAUACAUGAGGAUCACCCAUGUUCAGACUGAGCCUAGAGCGUCUAUGUAGAAGGGACUCGCA
| 1.585916
|
FMN
|
OFF
| 43.094638
| 27.173346
| 43.094638
| 27.173346
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.302237
| 3.763399
| 1.125314
| 1.586476
| 0.461162
| null | 94
|
null |
jl-ex1-4.74 5966148 mod
|
ACCUCACAUGAGGAUCACCCAUGUUAGGAUAUUAAAUAGCGCGCAAAACAGCCCUGUAUGAGAAGGAGCUGGGA
| 1.094655
|
FMN
|
OFF
| 14.846599
| 13.562815
| 14.846599
| 13.562815
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.607332
| 2.697771
| 0.43041
| 0.520848
| 0.090439
| null | 72
|
null |
jl-ex1-4.75 5996513 mod
|
AACCGACAUGAGGAUCACCCAUGUAAGGAUAUCCACGGACAACGCCAUAGUUGCCGGCGGAGAAGGUGCGUGGU
| 1.772681
|
FMN
|
OFF
| 46.043891
| 25.974159
| 46.043891
| 25.974159
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.257102
| 3.829595
| 1.08018
| 1.652673
| 0.572493
| null | 79
|
null |
AK-MS2ROC-r4-exclusion2-16
|
GGAAGGUGAGGAUAUACAAUGACGGAAACGUCAGGUGAGAGACAUGAGGAUCACCCAUGUAGAAGGCACGGAGA
| 9.91359
|
FMN
|
OFF
| 730.093592
| 73.645736
| 730.093592
| 73.645736
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 4.299266
| 6.593173
| 2.122344
| 4.41625
| 2.293906
| null | 58
|
null |
jl-ex3-4.69 ViennaUCT mod
|
AAACAGGGAGGAUAUACAUGAGGAUCACCCAUGUUCGAGCGUCCUUGAACUACCUCAGGUAGAAGGCCCUAAUU
| 0.300531
|
FMN
|
OFF
| 111.660188
| 371.543292
| 111.660188
| 371.543292
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 5.917665
| 4.71546
| 3.740743
| 2.538538
| -1.202205
| null | 51
|
null |
eternacac ex6r4 sub8
|
GCGCGAAGGUAGGAUAUCCAGGGAUCUUCCCGCGGAGAAGGACCCACAUGAGGAUCACCCAUGUGGUGAUCCUG
| 1.079196
|
FMN
|
OFF
| 17.37417
| 16.099186
| 17.37417
| 16.099186
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.778769
| 2.854985
| 0.601846
| 0.678062
| 0.076216
| null | 78
|
null |
EX6 C.20
|
GCCCGCGCUAAGGAUAUCAGGGUUAAAAUAGUAUGAGAAGGUAGCACAUGAGGAUCACCCAUGUGUCCCUUAUG
| 1.050162
|
FMN
|
OFF
| 17.281699
| 16.456227
| 17.281699
| 16.456227
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.800704
| 2.849648
| 0.623782
| 0.672726
| 0.048944
| null | 64
|
null |
Design #4
|
AAGACACAUGAGGAUCACCCAUGUUAGGAUAUACGCAUGCAUGCAUGCAUGCAUGCAAGUAGAAGGAACCAUGC
| 1.005267
|
FMN
|
OFF
| 30.616198
| 30.455781
| 30.616198
| 30.455781
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.416276
| 3.421529
| 1.239354
| 1.244607
| 0.005253
| null | 64
|
null |
salish99_ex4_4_002
|
GUUGUGUAAGGAUAUGCCUGGCCGUGAGGCCAGAUUGAAUGGCAGAAGGUACAUGAGGAUCACCCAUGUACGGG
| 5.650024
|
FMN
|
OFF
| 187.514505
| 33.188268
| 187.514505
| 33.188268
| 8.819122
|
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.502196
| 5.233856
| 1.325274
| 3.056934
| 1.73166
| null | 134
|
null |
Exclusion 2 S1
|
GACAACAGAGGAUAUGCAUUGAGAUAGUUAUGAAGGUUGUUACAUGAGGAUCACCCAUGUAGAAGGCUGUCGUU
| 1.326109
|
FMN
|
OFF
| 24.311113
| 18.332662
| 24.311113
| 18.332662
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.908684
| 3.190934
| 0.731762
| 1.014011
| 0.282249
| null | 77
|
null |
EX6 C.19
|
GCUAUAGCGGAGGAUAUCCCGAAAAGAAGUUUAGGAGAAGGCCGCACAUGAGGAUCACCCAUGUGAGUCCGCAA
| 5.230493
|
FMN
|
OFF
| 118.512342
| 22.657968
| 118.512342
| 22.657968
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.120512
| 4.775017
| 0.943589
| 2.598095
| 1.654506
| null | 56
|
null |
EX6 C.18
|
UCAAUUGCGUAGGAUAUACGGGCGCAGGCUAGAGUAGAAGGACGCACAUGAGGAUCACCCAUGUGGGUACCGAU
| 6.446814
|
FMN
|
OFF
| 114.01522
| 17.685515
| 114.01522
| 17.685515
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.872746
| 4.736332
| 0.695824
| 2.55941
| 1.863586
| null | 61
|
null |
EX6 C.13
|
AACCCUGCCUAGGAUAUACAAAAGUCACAGCUGGUAGAAGGAGGCACAUGAGGAUCACCCAUGUCACCUCGCUU
| 1.02171
|
FMN
|
OFF
| 13.693187
| 13.402219
| 13.693187
| 13.402219
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.59542
| 2.616898
| 0.418498
| 0.439976
| 0.021478
| null | 128
|
null |
EX1 C.2
|
UUUGUACAUGAGGAUCACCCAUGUCAGGAUAUGUCAUCGCCGUCCGACGGCCGGCGUCACAGAAGGGACAUGCA
| 2.811356
|
FMN
|
OFF
| 78.102614
| 27.781123
| 78.102614
| 27.781123
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.324357
| 4.358024
| 1.147434
| 2.181101
| 1.033667
| null | 71
|
null |
EX1 C.10
|
UACUGACAUGAGGAUCACCCAUGUGAGGAUAUUCUCCUGCUAAAUUAAUGGUGGGUGUGAAGAAGGCACAAGGA
| 3.209283
|
FMN
|
OFF
| 119.678958
| 37.29149
| 119.678958
| 37.29149
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.618765
| 4.784813
| 1.441843
| 2.60789
| 1.166048
| null | 60
|
null |
EX1 C.22
|
GCCGUACAUGAGGAUCACCCAUGUCAGGAUAUUUAGCACUCGGAAUUUCCGAGAGGUCAAAGAAGGGACAUUGC
| 1.532334
|
FMN
|
OFF
| 26.882091
| 17.543237
| 26.882091
| 17.543237
| 8.819122
|
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.864669
| 3.29146
| 0.687746
| 1.114538
| 0.426792
| null | 98
|
null |
EX2 C.7
|
GCCGAAGGAGGAUAUACACCCGGUGGCAAAACGCCGGCUCGACAUGAGGAUCACCCAUGUAGAAGGCCUGUGGU
| 1.100145
|
FMN
|
OFF
| 17.994169
| 16.356176
| 17.994169
| 16.356176
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.794606
| 2.890048
| 0.617683
| 0.713125
| 0.095442
| null | 63
|
null |
EX2 C.15
|
UCCGGAGUAGGAUAUACGGUGUAAUGACACGGCGUCGAUCAACAUGAGGAUCACCCAUGUAGAAGGACUGCGUC
| 1.101772
|
FMN
|
OFF
| 15.861157
| 14.39604
| 15.861157
| 14.39604
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.666953
| 2.763873
| 0.490031
| 0.586951
| 0.09692
| null | 80
|
null |
EX2 C.19
|
GGUCACGUAGGAUAUACCUGGGCCUCUGAAUUCGGCAAUUUACAUGAGGAUCACCCAUGUAGAAGGACGAUGGC
| 0.811002
|
FMN
|
OFF
| 97.572672
| 120.311209
| 97.572672
| 120.311209
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 4.790082
| 4.580597
| 2.613159
| 2.403675
| -0.209484
| null | 58
|
null |
EX2 C.21
|
CCAAGGAGAGGAUAUACACGGUUAUGGCCUCUUGAGUGGCGACAUGAGGAUCACCCAUGUAGAAGGCUCAGGGC
| 2.834627
|
FMN
|
OFF
| 57.403854
| 20.250935
| 57.403854
| 20.250935
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.008201
| 4.050111
| 0.831279
| 1.873189
| 1.04191
| null | 119
|
null |
EX2 C.25
|
GUGCAGGUAGGAUAUACGUGAGAGCCUUGUGGGCGUCUGGUACAUGAGGAUCACCCAUGUAGAAGGACCGGGCU
| 3.635099
|
FMN
|
OFF
| 77.499519
| 21.319785
| 77.499519
| 21.319785
| 8.819122
|
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.059636
| 4.350272
| 0.882713
| 2.173349
| 1.290636
| null | 182
|
null |
EX3 C.3
|
ACGGAGCUAGGAUAUACAUGAGGAUCACCCAUGUAUGAUGCGGCGCCCUUUUGCGCCUGUAGAAGGAGCACCGU
| 1.035824
|
FMN
|
OFF
| 16.51437
| 15.943217
| 16.51437
| 15.943217
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.769033
| 2.804231
| 0.592111
| 0.627309
| 0.035197
| null | 88
|
null |
EX3 C.6
|
UUACAGCAAGGAUAUACAUGAGGAUCACCCAUGUAUGCGUGUUCGAGAGAGGCCUACGGUAGAAGGUGCAUGUU
| 0.929035
|
FMN
|
OFF
| 22.44008
| 24.154192
| 22.44008
| 24.154192
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.184458
| 3.110849
| 1.007536
| 0.933926
| -0.073609
| null | 108
|
null |
EX3 C.7
|
CCGAGGCGAGGAUAUACAUGAGGAUCACCCAUGUCUGACCGACGCGCGCCAGGCAUAUGUAGAAGGCGCCGGAA
| 4.383226
|
FMN
|
OFF
| 138.247175
| 31.540049
| 138.247175
| 31.540049
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.451258
| 4.929043
| 1.274336
| 2.752121
| 1.477785
| null | 64
|
null |
EX3 C.8
|
UCACAGGGAGGAUAUACAUGAGGAUCACCCAUGUGAAUCUUCGACCUGCAGGUACUUUGUAGAAGGCCCAGUGG
| 1.148505
|
FMN
|
OFF
| 122.987657
| 107.084975
| 122.987657
| 107.084975
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.673623
| 4.812084
| 2.4967
| 2.635162
| 0.138461
| null | 84
|
null |
EX3 C.13
|
CGAUGCAGAGGAUAUACAUGAGGAUCACCCAUGUACCUACUCGGGCGUCCUCUUAGAUGUAGAAGGCUGACACU
| 1.150153
|
FMN
|
OFF
| 71.956414
| 62.562466
| 71.956414
| 62.562466
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.136166
| 4.276061
| 1.959243
| 2.099138
| 0.139895
| null | 82
|
null |
EX3 C.15
|
CCGAUACGAGGAUAUACAUGAGGAUCACCCAUGUAGUGGACCGAGCGUCGGUGUCUCAGUAGAAGGCGUUAAGA
| 1.06907
|
FMN
|
OFF
| 17.276065
| 16.159898
| 17.276065
| 16.159898
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.782533
| 2.849322
| 0.60561
| 0.6724
| 0.066789
| null | 120
|
null |
Exclusion 6 Mod4 of JL of Mod of Letion by ViennaUCT
|
UCAUGUCCUGAGGAUAUGUAGCGGAUAAACGCAACAGAAGGCAGGACAUGAGGAUCACCCAUGUGUGCCUUCUA
| 0.146924
|
FMN
|
OFF
| 14.190796
| 96.586119
| 14.190796
| 96.586119
| 8.819122
|
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.570435
| 2.652594
| 2.393513
| 0.475671
| -1.917841
| null | 83
|
null |
salish99_ex3_r4_026
|
UUGUUCUGAGGAUAUACAUGAGGAUCACCCAUGUGUUUCUGCUUGGUGUCUUGCGUUUGUAGAAGGCUGUUCUC
| 1.056355
|
FMN
|
OFF
| 27.99807
| 26.504409
| 27.99807
| 26.504409
| 8.819122
|
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.277311
| 3.332136
| 1.100389
| 1.155213
| 0.054825
| null | 720
|
null |
EX5 B.27
|
CGUUCGUGAGGAUAUUGUGGAAUUGACAUGAGGAUCACCCAUGUGGCCAUUGUCGACUCGCAAGAAGGCAUAGAUU
| 3.482912
|
FMN
|
OFF
| 188.848456
| 54.22143
| 188.848456
| 54.22143
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.993076
| 5.240945
| 1.816154
| 3.064023
| 1.247869
| null | 104
|
null |
EX5 B.29
|
CGGUACACAGGAUAUAACGUCUGCAACAUGAGGAUCACCCAUGUUGUCCAAACGUUGCGGUUAGAAGGGUGGGCGC
| 2.308413
|
FMN
|
OFF
| 70.772791
| 30.658634
| 70.772791
| 30.658634
| 8.819122
|
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.422914
| 4.259475
| 1.245992
| 2.082552
| 0.83656
| null | 76
|
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