Search is not available for this dataset
id
float64 286
2.87k
⌀ | design
stringlengths 1
92
⌀ | sequence
stringlengths 74
86
| activation_ratio
float64 0.02
60
| ligand
stringclasses 3
values | switch
stringclasses 2
values | kd_off
float64 2.54
1.9k
| kd_on
float64 2.53
1.53k
| kd_fmn
float64 8.14
1.7k
⌀ | kd_no_fmn
float64 8.17
1.72k
⌀ | min_kd_val
float64 2.53
10.3
| ms2_aptamer
stringclasses 128
values | lig_aptamer
stringclasses 59
values | ms2_lig_aptamer
stringclasses 406
values | log_kd_nolig
float64 0.93
7.45
| log_kd_lig
float64 0.93
7.55
| log_kd_nolig_scaled
float64 0
6.43
| log_kd_lig_scaled
float64 -0.16
5.98
| log_AR
float64 -3.72
4.09
| folding_subscore
float64 4.86
30
⌀ | num_clusters
float64 51
930
⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
null |
JR_SSNG1_Sub031
|
ACAUACUCUCGAGGAUAUCGUAUGGAAAAGAAACGAGAAGGCGAAUGUUAAUUUCUAAUACAUGACAUGAGGAUCACCCAUGUA
| 1.112494
|
FMN
|
ON
| 30.387622
| 27.314875
| 27.314875
| 30.387622
| 4.737167
|
................................................................(((((x((xxxx))))))).
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)......................(((((x((xxxx))))))).
| 3.414035
| 3.307431
| 1.858596
| 1.751992
| 0.106604
| null | 96
|
null |
JR_SSNG1_Sub040
|
UCAUAAAUUCGAGGAUAUCGGUGAUAAAGAAGACGAGAAGGCGAUUAGAGAGAGAUGGUUAUAGACAUGAGGAUCACCCAUGUU
| 1.406643
|
FMN
|
ON
| 33.9274
| 24.119402
| 24.119402
| 33.9274
| 4.737167
|
................................................................(((((x((xxxx))))))).
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)......................(((((x((xxxx))))))).
| 3.524223
| 3.183017
| 1.968784
| 1.627577
| 0.341206
| null | 147
|
null |
JR_ExcNG2_Sub046
|
CGUGUUGACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAUAUUUUGUGAUCAUAUUUAUGAUCCAGAAGGUCGUUGACACG
| 2.301468
|
FMN
|
OFF
| 130.879376
| 56.867774
| 130.879376
| 56.867774
| 4.737167
|
......................(((((x((xxxx)))))))...........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
| 4.040729
| 4.874276
| 2.485289
| 3.318837
| 0.833547
| null | 293
|
null |
AK-NGROCr2-ExNG1-1
|
ACAUGAAAUCGAGGAUAUGCAAAAAAAAAAAAAGCAGAAGGCGAAAAAAAAACUCGAAAAAACAUGAGGAUCACCCAUGUAAAA
| 0.868687
|
FMN
|
OFF
| 22.952886
| 26.422504
| 22.952886
| 26.422504
| 4.737167
|
.............................................................(((((x((xxxx)))))))....
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
| 3.274216
| 3.133444
| 1.718777
| 1.578004
| -0.140772
| null | 71
|
null |
Exclusion NG 1
|
UUUGGUUGUGUAGGAUAUGUGUGGCGGGCUGGCACAGAAGGACAUGAGGAUCACCCAUGUGGUUUGGGUUGGGUGGUUGGCCCG
| 0.817584
|
FMN
|
OFF
| 770.606714
| 942.541715
| 770.606714
| 942.541715
| 4.737167
|
.........................................(((((x((xxxx)))))))........................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
| 6.84858
| 6.647178
| 5.293141
| 5.091739
| -0.201402
| null | 427
|
null |
1st Go
|
AGGGUAGACGUAGGAUAUACGGAAUGAAUGAAAGUAGAAGGAUGACAUGAGGAUCACCCAUGUGAAAUGAAAUGAUGAAGGGUG
| 0.879998
|
FMN
|
OFF
| 509.937654
| 579.476232
| 509.937654
| 579.476232
| 4.737167
|
............................................(((((x((xxxx))))))).....................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
| 6.362125
| 6.234288
| 4.806685
| 4.678849
| -0.127836
| null | 205
|
null |
JR_ExcNG2_Sub051Nu
|
AGAGAUGACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUUUAUAUAGUGAAAUUGAUUGAAUUCCAGAAGGUCGAAUAAAAG
| 0.789966
|
FMN
|
OFF
| 36.890412
| 46.698728
| 36.890412
| 46.698728
| 4.737167
|
......................(((((x((xxxx)))))))...........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
| 3.843717
| 3.607952
| 2.288278
| 2.052512
| -0.235765
| null | 100
|
null |
JR_ExcNG3_Sub051
|
UACAGCGUAGAUAAUUAUGUUACAUGAGGAUCACCCAUGUCAUAGGAUAUGCAGUGGAAUACACUGCAGAAGGAUGCAUCGCUG
| 1.264593
|
FMN
|
OFF
| 18.542756
| 14.663018
| 18.542756
| 14.663018
| 4.737167
|
.....................(((((x((xxxx)))))))............................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
.....................(((((x((xxxx)))))))..(xxxxxx(.................)xxxxx)..........
| 2.685329
| 2.920079
| 1.129889
| 1.36464
| 0.234751
| null | 98
|
null |
JR_ExcNG1_Sub059
|
AGAAAUUAGUGAGGAUAUGCAUAAUAUUUAGCUGCAGAAGGCACGGACCACAAGACAUGAGGAUCACCCAUGUGGAAUAUAGAU
| 1.165193
|
FMN
|
OFF
| 23.413141
| 20.093785
| 23.413141
| 20.093785
| 4.737167
|
......................................................(((((x((xxxx)))))))...........
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)............(((((x((xxxx)))))))...........
| 3.000411
| 3.153297
| 1.444971
| 1.597858
| 0.152887
| null | 162
|
null |
JR_ExcNG2_Sub057
|
UUUACUUACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAUGUAUGAUGAUCUAGUAGUUGGGCCAGAAGGUCGUGAUUAUU
| 1.285709
|
FMN
|
OFF
| 21.781835
| 16.941502
| 21.781835
| 16.941502
| 4.737167
|
......................(((((x((xxxx)))))))...........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
| 2.829766
| 3.081076
| 1.274327
| 1.525637
| 0.25131
| null | 627
|
null |
JR_SSNG2_Sub053
|
ACCAAUCACAUAGGAUAUAGAAUAUUAAAUUUUUACAUGAGGAUCACCCAUGUUUUAUUGGGAUACUAGAAGGAUGAGUAAUAA
| 1.043909
|
FMN
|
ON
| 112.9458
| 108.195035
| 108.195035
| 112.9458
| 4.737167
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(................(((((x((xxxx)))))))..............)xxxxx)..........
| 4.726908
| 4.683935
| 3.171469
| 3.128496
| 0.042973
| null | 154
|
null |
Same State NG3
|
ACAUGAGGAUCACCCAUGUUCGUCGCGUUGUGUCGCGAGUCUGAGGAUAUCGAGGUGGGUUUUGUUGAGAAGGCGGGCCCGUGU
| 0.856617
|
FMN
|
ON
| 129.463966
| 151.133935
| 151.133935
| 129.463966
| 4.737167
|
(((((x((xxxx))))))).................................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
(((((x((xxxx))))))).......................(xxxxxx(.................)xxxxx)..........
| 4.863403
| 5.018166
| 3.307963
| 3.462727
| -0.154764
| null | 515
|
null |
Same State NG1
|
UGGUUGCGAGUAGGAUAUGGUGUUUUUGUUUGGUUAGAAGGGUUCGUGAUUGUGACAUGAGGAUCACCCAUGUGUGUUGUUGUU
| 0.90271
|
FMN
|
ON
| 63.64415
| 70.503391
| 70.503391
| 63.64415
| 4.737167
|
......................................................(((((x((xxxx)))))))...........
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)............(((((x((xxxx)))))))...........
| 4.153307
| 4.255661
| 2.597868
| 2.700221
| -0.102353
| null | 598
|
null |
JR_SSNG2_Sub070
|
UUUAUUAAACAAGGAUAUCAUUUGUGUACAAGUUUUACAUGAGGAUCACCCAUGUUAAAUGGUUUUGAGAAGGUGUUUAGAAUU
| 1.354675
|
FMN
|
ON
| 34.159708
| 25.216157
| 25.216157
| 34.159708
| 4.737167
|
....................................(((((x((xxxx))))))).............................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(..................(((((x((xxxx)))))))............)xxxxx)..........
| 3.531047
| 3.227485
| 1.975607
| 1.672046
| 0.303562
| null | 259
|
null |
JR_SSNG2_Sub074Nu
|
AAUAGUAUUGUAGGAUAUGUUAUUUUCUAACAUGAGGAUCACCCAUGUAAUAUAGGGUUGUUUCUACAGAAGGACAAUUUAUUA
| 1.312534
|
FMN
|
ON
| 508.564947
| 387.467898
| 387.467898
| 508.564947
| 4.737167
|
.............................(((((x((xxxx)))))))....................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(...........(((((x((xxxx)))))))...................)xxxxx)..........
| 6.231593
| 5.959633
| 4.676154
| 4.404194
| 0.27196
| null | 195
|
null |
Mod-Potterland
|
AAGAAGCACGCAGGAUAUCUCACCCAUGUAAGAAGAGAAGGGCGACAUGAGGAUCACCCAUGUCAACAUGAGGAUCACCCAUGU
| 1.411095
|
FMN
|
OFF
| 87.769241
| 62.199406
| 87.769241
| 62.199406
| 4.737167
|
............................................(((((x((xxxx))))))).....................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
| 4.130345
| 4.474711
| 2.574906
| 2.919272
| 0.344366
| null | 340
|
null |
BrourdMod 1 - Jieux - Exclusion NG1
|
GCAGCUAAUGCAGGAUAUCAGCACGUGUAGUGCUGAGAAGGGCACAUGAGGAUCACCCAUGUGAUCAAUUAAUAUUAAUGCUGC
| 6.077464
|
FMN
|
OFF
| 151.610868
| 24.946404
| 151.610868
| 24.946404
| 4.737167
|
...........................................(((((x((xxxx)))))))......................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx).(((((x((xxxx)))))))......................
| 3.21673
| 5.021317
| 1.66129
| 3.465878
| 1.804587
| null | 568
|
null |
Thrunch 3 - Jieux - Exclusion NG 1
|
GCUGCAAAGUAAGGAUAUGCCUAGGAAACCUAGGCAGAAGGUACAUGAGGAUCACCCAUGUUAACGCAAAGCGAAUAAAGCAGC
| 1.336962
|
FMN
|
OFF
| 24.143217
| 18.058264
| 24.143217
| 18.058264
| 4.737167
|
..........................................(((((x((xxxx))))))).......................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)(((((x((xxxx))))))).......................
| 2.893603
| 3.184003
| 1.338164
| 1.628564
| 0.2904
| null | 293
|
null |
JieuxMod 4 - Jieux - Exclusion NG 2
|
GCUGCAUGCAGAGGAUAUAUAACAUGAGGAUCACCCAUGUAAAAUAUAUGGAUAAACCAGAUAGUAUAGAAGGCUGCAUGCAGC
| 0.835428
|
FMN
|
OFF
| 19.152148
| 22.924947
| 19.152148
| 22.924947
| 4.737167
|
.....................(((((x((xxxx)))))))............................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(...(((((x((xxxx)))))))...........................)xxxxx)..........
| 3.132226
| 2.952415
| 1.576786
| 1.396976
| -0.179811
| null | 194
|
null |
JieuxMod 2 - Jieux - Exclusion NG 2
|
GCUGCAUGCAGAGGAUAUGACACAUGAGGAUCACCCAUGUAAUAAAUGAGAAUUUCGAAUGUAACUCAGAAGGCUGCAUGCAGC
| 3.43357
|
FMN
|
OFF
| 186.191205
| 54.226712
| 186.191205
| 54.226712
| 4.737167
|
.....................(((((x((xxxx)))))))............................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(...(((((x((xxxx)))))))...........................)xxxxx)..........
| 3.993174
| 5.226774
| 2.437734
| 3.671335
| 1.2336
| null | 232
|
null |
JR_ExcNG1_Sub073
|
UGAUUUCAUGUAGGAUAUGCUUGGCGUAGCUACGCAGAAGGACAUGAGGAUCACCCAUGUUUUAGCGUCUGAGUAUAGAUUCUU
| 2.543594
|
FMN
|
OFF
| 89.71591
| 35.271316
| 89.71591
| 35.271316
| 4.737167
|
.........................................(((((x((xxxx)))))))........................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
| 3.56307
| 4.496648
| 2.007631
| 2.941209
| 0.933578
| null | 798
|
null |
JR_ExcNG1_Sub080
|
AGUUAUCAUGUAGGAUAUGCUUGAGGUAAGAAAGCAGAAGGACAUGAGGAUCACCCAUGUUAAUGAUACAGAUUUUAGUUUCUU
| 6.119294
|
FMN
|
OFF
| 201.207069
| 32.880767
| 201.207069
| 32.880767
| 4.737167
|
.........................................(((((x((xxxx)))))))........................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
| 3.492888
| 5.304335
| 1.937449
| 3.748895
| 1.811447
| null | 283
|
null |
JR_ExcNG2_Sub062
|
UAUUUUGAAGUAGGAUAUCAACACACAUGAGGAUCACCCAUGUUAGAUGUGGAUGUUGUAUGUUAUGAGAAGGACUUCGAUUCG
| 3.713735
|
FMN
|
OFF
| 76.434445
| 20.581556
| 76.434445
| 20.581556
| 4.737167
|
........................(((((x((xxxx))))))).........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(......(((((x((xxxx)))))))........................)xxxxx)..........
| 3.024395
| 4.336433
| 1.468956
| 2.780994
| 1.312038
| null | 478
|
null |
JR_SSNG3_Sub057
|
UUUUAACUACAAUUACAUGAGGAUCACCCAUGUUUUGGGAUGCAGGAUAUGUGGUAUAUUAAUUAACAGAAGGGCAAUAAUUAA
| 1.241363
|
FMN
|
ON
| 57.624954
| 46.420722
| 46.420722
| 57.624954
| 4.737167
|
..............(((((x((xxxx)))))))...................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
| 4.053956
| 3.837746
| 2.498516
| 2.282307
| 0.21621
| null | 79
|
null |
JR_SSNG2_Sub061
|
UCAUAAGAACAAGGAUAUCAAUAAAAUAUAAAUGCUACAUGAGGAUCACCCAUGUUUUAGCAUGGUGAGAAGGUGUAUUUACGG
| 1.593687
|
FMN
|
ON
| 67.792396
| 42.538086
| 42.538086
| 67.792396
| 4.737167
|
....................................(((((x((xxxx))))))).............................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(..................(((((x((xxxx)))))))............)xxxxx)..........
| 4.21645
| 3.7504
| 2.661011
| 2.19496
| 0.46605
| null | 178
|
null |
JR_ExcNG3_Sub076
|
UGUCUGAUCUAAUAACAUGAGGAUCACCCAUGUGUUCACAACUAGGAUAUCGAUUGUUAAGAAAUCGAGAAGGAGUAUACAUUA
| 1.134998
|
FMN
|
OFF
| 50.802673
| 44.760126
| 50.802673
| 44.760126
| 4.737167
|
..............(((((x((xxxx)))))))...................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
| 3.801318
| 3.927949
| 2.245878
| 2.37251
| 0.126631
| null | 326
|
null |
JR_ExcNG3_Sub071
|
AAUCUAAUCCUUAAACAUGAGGAUCACCCAUGUAUUGGCAAGUAGGAUAUCGAUAAAUAUUUCAACGAGAAGGACUAUACAAAA
| 1.460587
|
FMN
|
OFF
| 31.694841
| 21.70007
| 31.694841
| 21.70007
| 4.737167
|
..............(((((x((xxxx)))))))...................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
| 3.077315
| 3.456154
| 1.521876
| 1.900715
| 0.378838
| null | 135
|
null |
Exclusion NG 3
|
GGUUGGUAUGAUUGGGUAUGAUACAUGAGGAUCACCCAUGUGCAGGAUAUGUUACACUCACGAUGAUAGAAGGGUAGGGUUUGA
| 0.886474
|
FMN
|
OFF
| 270.393638
| 305.021656
| 270.393638
| 305.021656
| 4.737167
|
......................(((((x((xxxx)))))))...........................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
......................(((((x((xxxx))))))).(xxxxxx(.................)xxxxx)..........
| 5.720383
| 5.599879
| 4.164943
| 4.044439
| -0.120504
| null | 155
|
null |
JR_ExcNG2_Sub066
|
UGAGAUGUAGUAGGAUAUCAGGUUACAUGAGGAUCACCCAUGUUAGAUUGGUGGAUAGAUGUUGAUGAGAAGGACUUUUGAGUU
| 1.577708
|
FMN
|
OFF
| 100.185933
| 63.500938
| 100.185933
| 63.500938
| 4.737167
|
........................(((((x((xxxx))))))).........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(......(((((x((xxxx)))))))........................)xxxxx)..........
| 4.151055
| 4.607028
| 2.595615
| 3.051588
| 0.455973
| null | 631
|
null |
JR_SSNG3_Sub074
|
ACAUGAGGAUCACCCAUGUAAUAACAUCGGUUAUACGAAAGUGAGGAUAUCGAUCAGGCAUAUUACGAGAAGGCACAAUAGGGA
| 0.954743
|
FMN
|
ON
| 41.271829
| 43.228204
| 43.228204
| 41.271829
| 4.737167
|
(((((x((xxxx))))))).................................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
(((((x((xxxx))))))).......................(xxxxxx(.................)xxxxx)..........
| 3.72018
| 3.766493
| 2.164741
| 2.211054
| -0.046313
| null | 101
|
null |
yay
|
AAAUAUAAGCGAGGAUAUAUACAUGAGGAUCACCCAUGUCCCAUGUCAUGAGCAUCAGCCAUGUAGUAGAAGGCGCACAUGAGG
| 0.532093
|
FMN
|
OFF
| 53.448661
| 100.449811
| 53.448661
| 100.449811
| 4.737167
|
....................(((((x((xxxx))))))).............................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(..(((((x((xxxx)))))))............................)xxxxx)..........
| 4.609658
| 3.978722
| 3.054219
| 2.423282
| -0.630937
| null | 124
|
null |
JR_ExcNG2_Sub078
|
GCUAUUGGCUAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAAGAAUUGUGAUCAUAUAAAUGAUCCAGAAGGUAGCUGUUAGC
| 1.789245
|
FMN
|
OFF
| 501.835629
| 280.473396
| 501.835629
| 280.473396
| 4.737167
|
......................(((((x((xxxx)))))))...........................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
| 5.636479
| 6.218273
| 4.08104
| 4.662833
| 0.581794
| null | 389
|
null |
salish99_ISLExNG3_028 #HINGE
|
ACGACAAAAGUCGAACGAUGUAGCAGAAGGACAUGAGGAUCACCCAUGUAAAAUGUAACAGCCAUGUAGGAUAUGCUACAUCGA
| 9.192338
|
FMN
|
OFF
| 288.149222
| 31.346673
| null | null | 2.533415
|
..............................(((((x((xxxx)))))))...................................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(((((x((xxxx))))))..................)xxxxxx)..........
| 3.445108
| 5.663478
| 2.51554
| 4.73391
| 2.21837
| null | 233
|
null |
WHB=ISS-NG1-MS2FAR3 #bad
|
AUGCCUAAUGAGAAGGUGUAUAUAAAUUAUAUACAAGGAUAUCGGUCAAGCAUGAAAACAUGAGGAUCACCCAUGUUAAGGCAU
| 1.190159
|
FMN
|
ON
| 7.566481
| 6.357539
| null | null | 2.533415
|
.........................................................(((((x((xxxx)))))))........
|
..........(xxxxx(.................)xxxxxx)..........................................
|
..........(xxxxx(.................)xxxxxx)...............(((((x((xxxx)))))))........
| 2.023728
| 1.849641
| 1.09416
| 0.920073
| 0.174087
| null | 78
|
null |
salish99_InSLSSNG1_001 #endbits investigation
|
AGUGUCAUCGAGAAGGCCUCAACAUGAGGAUCACCCAUGUUGUAAUAUGGGAGGAUAUCGAUGAUACAGCUACGUUUCGUAGCU
| 3.345876
|
FMN
|
ON
| 18.893116
| 5.646687
| null | null | 2.533415
|
.....................(((((x((xxxx)))))))............................................
|
..........(xxxxx(.................................)xxxxxx)..........................
|
..........(xxxxx(....(((((x((xxxx)))))))..........)xxxxxx)..........................
| 2.938798
| 1.731069
| 2.009229
| 0.801501
| 1.207729
| null | 268
|
null |
salish99_ISLSSNG3_101 #TRIPLE endbits investigation
|
UUUUACGUUUCGUAGCAGUGUCAUCGAGAAGGCCCUGACAUGAGGAUCACCCAUGUUGUUACAUGGGAGGAUAUCGAUGAUAAA
| 2.761824
|
FMN
|
ON
| 15.8834
| 5.751054
| null | null | 2.533415
|
.....................................(((((x((xxxx)))))))............................
|
..........................(xxxxx(.................................)xxxxxx)..........
|
..........................(xxxxx(....(((((x((xxxx)))))))..........)xxxxxx)..........
| 2.765275
| 1.749383
| 1.835706
| 0.819815
| 1.015891
| null | 151
|
null |
ISL-E-NG1_65
|
UGCAUGUAUGAGAAGGCUAAUUUGGACAUUAUUUAUGAUGAUGUUUAGGUUAGAGGAUAUUGGGACAUGAGGAUCACCCAUGUA
| 0.834124
|
FMN
|
OFF
| 17.95917
| 21.530584
| null | null | 2.533415
|
................................................................(((((x((xxxx))))))).
|
..........(xxxxx(...................................)xxxxxx)........................
|
..........(xxxxx(...................................)xxxxxx)....(((((x((xxxx))))))).
| 3.069474
| 2.888101
| 2.139906
| 1.958533
| -0.181374
| null | 237
|
null |
salish99_SLSSNG3_017 #HINGE
|
AGCUACGUUUCGUAGCAGCUAGGUGAGGAUAUUAAAAUUUUCACAUGAGGAUCACCCAUGUAUGUGAAGAAGGCGCCUAGAAAG
| 6.922618
|
FMN
|
ON
| 53.732496
| 7.761875
| null | null | 2.533415
|
..........................................(((((x((xxxx))))))).......................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(..........(((((x((xxxx)))))))......)xxxxx)..........
| 3.984018
| 2.049224
| 3.05445
| 1.119656
| 1.934794
| null | 121
|
null |
salish99_ISLExNG1_x116 #HINGE
|
AGAAACUACGAGAAGGACAUGUGGUCCUUCAGUUACAUGAGGAUCACCCAUGUAGGAUAUAAAAGUUUCAGGAUCGUGAGAUCA
| 1.04808
|
FMN
|
OFF
| 7.104546
| 6.778631
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxx(...................................)xxxxxx)........................
|
..........(xxxxx(.................(((((x((xxxx)))))))xxxxxx)........................
| 1.913775
| 1.960735
| 0.984207
| 1.031167
| 0.04696
| null | 196
|
null |
JR #DistanceFar #Hairpin #Static #Noisy #NP SLSSNG3 Sub062
|
CCCAAACUUGGGCUUGGUGGUGCAUAGGAUAUGCUUGAACAUGAGGAUCACCCAUGUACAACUGUGCAGAAGGGUGCAGGGCAA
| 2.19735
|
FMN
|
ON
| 40.909315
| 18.617565
| null | null | 2.533415
|
......................................(((((x((xxxx)))))))...........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
| 3.711358
| 2.924106
| 2.78179
| 1.994537
| 0.787252
| null | 184
|
null |
Sara'sguidence_#HighScoreProbStacks#7
|
AUGGAUGUCACAGGAUAUGCUAUGGAUACCAUAGCAGAAGGGUGAUCCAUCCUAUGUAAAUACAUGAGGAUCACCCAUGUAUCC
| 1.519036
|
FMN
|
ON
| 111.820181
| 73.612576
| null | null | 2.533415
|
.............................................................(((((x((xxxx)))))))....
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
| 4.716892
| 4.298816
| 3.787324
| 3.369248
| 0.418076
| null | 177
|
null |
WHB=IEX-NG3-MS2FAR1 #bad
|
AGGAACAUGAGGAUCACCCAUGUUAGAGACCUCAUGCGAUGUAGAAGGAUAAUCCGAGAAGAGGUAUAGGAUAUACAUGAGAAA
| 0.822924
|
FMN
|
OFF
| 171.343161
| 208.2125
| null | null | 2.533415
|
....(((((x((xxxx))))))).............................................................
|
..........................................(xxxxx(.................)xxxxxx)..........
|
....(((((x((xxxx)))))))...................(xxxxx(.................)xxxxxx)..........
| 5.338559
| 5.143668
| 4.408991
| 4.2141
| -0.194891
| null | 129
|
null |
JR #DistanceFar #Hairpin #NP SLSSNG3 Sub067
|
CGCAAAGAUGGGUUUAAUGGAGCAUAGGAUAUGCUUGUACAUGAGGAUCACCCAUGUAAUAUUGUGCAGAAGGGUGCAUUUGCG
| 3.944098
|
FMN
|
ON
| 293.010401
| 74.290845
| null | null | 2.533415
|
......................................(((((x((xxxx)))))))...........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
| 5.680208
| 4.307988
| 4.75064
| 3.37842
| 1.37222
| null | 57
|
null |
JR #DistanceClose #StaticP #NP InvSLSSNG3 Sub075
|
GCGUAUUAGGUGUAGCUAGUCAUUCAAGAAGGGUGAAGAACAUGAGGAUCACCCAUGUAGUUUAUACAGGAUAUUGAUAUACGC
| 2.248823
|
FMN
|
ON
| 528.41587
| 234.974427
| null | null | 2.533415
|
.......................................(((((x((xxxx)))))))..........................
|
..........................(xxxxx(.................................)xxxxxx)..........
|
..........................(xxxxx(......(((((x((xxxx)))))))........)xxxxxx)..........
| 6.269884
| 5.459477
| 5.340315
| 4.529908
| 0.810407
| null | 175
|
null |
JR #DistanceFar #Static InvSLSSNG3 Sub064
|
UUCGCUAAGGUGUAGCGAGACUUGCAAGAAGGGUGAAGAACAUGAGGAUCACCCAUGUAAGCCUUACAGGAUAUUGCUUGACGA
| 2.921017
|
FMN
|
ON
| 106.243951
| 36.372251
| null | null | 2.533415
|
.......................................(((((x((xxxx)))))))..........................
|
..........................(xxxxx(.................................)xxxxxx)..........
|
..........................(xxxxx(......(((((x((xxxx)))))))........)xxxxxx)..........
| 4.665738
| 3.593806
| 3.73617
| 2.664238
| 1.071932
| null | 149
|
null |
Inv SL ExNG3
|
GCGUCAGAAUUAAUUGUGACAGGCAGAAGGCCAUAUUUCAUGUCAGACAUGAGGAUCACCCAUGUGGAGGAUAUGCAGUUACAC
| 2.272721
|
FMN
|
OFF
| 98.708538
| 43.431881
| null | null | 2.533415
|
..............................................(((((x((xxxx)))))))...................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
| 3.771194
| 4.592171
| 2.841626
| 3.662603
| 0.820978
| null | 197
|
null |
#StaticStemDeletion - salish99-SS2_33_005
|
CAGCGAUAGCUGAACAAUCUAUCUGAGGAUAUCAUGAAUAAACAUGAGGAUCACCCAUGUAAAUAUGAGAAGGCAGAUAGAUUG
| 1.00855
|
FMN
|
ON
| 4.823293
| 4.782404
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(.........(((((x((xxxx))))))).......)xxxxx)..........
| 1.573457
| 1.564943
| 0.643889
| 0.635375
| 0.008513
| null | 129
|
null |
Inv SL EXNG1 08
|
CUGCCGUAGGAGAAGGACGGCGGGUUAUUUUUGUACAUGAGGAUCACCCAUGUAGGAUAUCCUACGUCAGGCGACCUACUACAG
| 1.0463
|
FMN
|
OFF
| 34.47642
| 32.950791
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxx(...................................)xxxxxx)........................
|
..........(xxxxx(.................(((((x((xxxx)))))))xxxxxx)........................
| 3.495015
| 3.540276
| 2.565447
| 2.610707
| 0.04526
| null | 177
|
null |
Inv SL EXNG1 11
|
GUUAUUGACAAGAAGGCAUACAUGAGGAUCACCCAUGUUCUACAUGGAUAAUGAGGAUAUUGCCAAUACAUGAGGAUCACCCAG
| 1.133694
|
FMN
|
OFF
| 77.456185
| 68.321924
| null | null | 2.533415
|
...................(((((x((xxxx)))))))..............................................
|
..........(xxxxx(...................................)xxxxxx)........................
|
..........(xxxxx(..(((((x((xxxx)))))))..............)xxxxxx)........................
| 4.224231
| 4.349712
| 3.294663
| 3.420144
| 0.125482
| null | 138
|
null |
WHB=ISS-NG2-MS2FAR1 #bad
|
ACUAUAUAUGAGAAGGUGAAGUGGAAACAUGAGGAUCACCCAUGUAAUACGAAGCGUAUUUUUAUCAAGGAUAUCAUAUAUAGA
| 1.276146
|
FMN
|
ON
| 10.236033
| 8.02105
| null | null | 2.533415
|
..........................(((((x((xxxx))))))).......................................
|
..........(xxxxx(.................................................)xxxxxx)..........
|
..........(xxxxx(.........(((((x((xxxx))))))).....................)xxxxxx)..........
| 2.325914
| 2.082069
| 1.396346
| 1.152501
| 0.243845
| null | 104
|
null |
JR #DistanceClose #Static #StaticP #NP InvSSNG2 Sub066
|
CACGGAUAGUAGAAGGGUGACAUGAGGAUCACCCAUGUACUUAUGUAGGUAUUACUAUAUAAUUCACAGGAUAUACUAUCCGUG
| 8.795635
|
FMN
|
ON
| 794.134788
| 90.287378
| null | null | 2.533415
|
...................(((((x((xxxx)))))))..............................................
|
..........(xxxxx(.................................................)xxxxxx)..........
|
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
| 6.677253
| 4.502998
| 5.747685
| 3.573429
| 2.174256
| null | 166
|
null |
Inv Small Loop Ecxl NG3 cac19
|
AUCUAAGAAUUAAUUGUGACAGUGAGAAGGCUAUAGUUUGUGACCGACAUGAGGAUCACCCAUGUAGAGGAUAUCACUAGCUAC
| 6.335418
|
FMN
|
OFF
| 252.997247
| 39.933792
| null | null | 2.533415
|
..............................................(((((x((xxxx)))))))...................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
| 3.687223
| 5.533379
| 2.757655
| 4.60381
| 1.846156
| null | 150
|
null |
Inv Small Loop Ecxl NG3 cac26
|
AGGUAAGACUUAAUUGUGCUGGUGAGAAGGCAAAUGGUUGUGAUUAACAUGAGGAUCACCCAUGUUGAGGAUAUCAUCGGUAUC
| 0.125814
|
FMN
|
OFF
| 62.920887
| 500.111037
| null | null | 2.533415
|
..............................................(((((x((xxxx)))))))...................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
| 6.21483
| 4.141878
| 5.285262
| 3.21231
| -2.072952
| null | 197
|
null |
Inv SL ExNG3 19
|
CUGUGACGGUGCGCAAGUGGACGUAGAAGGGUCACAUGAGGAUCACCCAUGUGGGCCUGCGAGUGACAGGAUAUACGUUCGUGC
| 3.79922
|
FMN
|
OFF
| 57.005146
| 15.004435
| null | null | 2.533415
|
.................................(((((x((xxxx)))))))................................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(..(((((x((xxxx)))))))..............)xxxxxx)..........
| 2.708346
| 4.043142
| 1.778778
| 3.113573
| 1.334796
| null | 317
|
null |
HI HULLO HUG
|
AUGUGGUGCGUAGGAUAUCAUUGAGGGUCACCCUGAGAAGGACGUGAGGACAUGAGGAUCACCCAUGUGGAUCACCCAUGUCAU
| 1.176808
|
FMN
|
OFF
| 288.317655
| 244.999798
| null | null | 2.533415
|
.................................................(((((x((xxxx)))))))................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx).......(((((x((xxxx)))))))................
| 5.501257
| 5.664063
| 4.571689
| 4.734495
| 0.162805
| null | 338
|
null |
Default title
|
GAGUAGAAGUUAGGAUAUUGGAUAGGGACGGAAUAAGAAGGAGCAAGACAUGAGGAUCACCCAUGUGUAGAAGAAGAGAUCCUC
| 0.37611
|
FMN
|
OFF
| 168.440184
| 447.847611
| null | null | 2.533415
|
...............................................(((((x((xxxx)))))))..................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx).....(((((x((xxxx)))))))..................
| 6.104453
| 5.126581
| 5.174885
| 4.197012
| -0.977872
| null | 105
|
null |
D3-PAT'sLook_#HighScoreProbStacks#4
|
UUGCCUCAGAACAUGAGGAUCACCCAUGUGCUGCGGGCAACGUAGGAUAUGAUGGUAUGAUACCGUCAGAAGGAUGAUGGUACC
| 1.102138
|
FMN
|
ON
| 5.858709
| 5.315768
| null | null | 2.533415
|
..........(((((x((xxxx))))))).......................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
..........(((((x((xxxx))))))).............(xxxxxx(.................)xxxxx)..........
| 1.767929
| 1.670678
| 0.838361
| 0.741109
| 0.097252
| null | 285
|
null |
Sara'sEyes_#HighScoreProbStacks#20
|
GUGAAGAUAGCAGGAUAUAUAUUUCCUACAUGAGGAUCACCCAUGUAGGUGAUCAGCCGAGUAAAGUAGAAGGGCUAUCUUUAC
| 1.510412
|
FMN
|
ON
| 16.137098
| 10.683905
| null | null | 2.533415
|
...........................(((((x((xxxx)))))))......................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(.........(((((x((xxxx))))))).....................)xxxxx)..........
| 2.781121
| 2.368738
| 1.851553
| 1.43917
| 0.412382
| null | 203
|
null |
salish99_ExNG1_213 #endbits investigation
|
CCACGGUAUGUAGGAUAUGCAUAGCAUUGCUAUGCAGAAGGACAUGAGGAUCACCCAUGUAUGUAUUCCAUACUAAUCCCGUGA
| 0.889528
|
FMN
|
OFF
| 5.301702
| 5.960132
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
| 1.785093
| 1.668028
| 0.855524
| 0.73846
| -0.117065
| null | 170
|
null |
#StaticStemDeletion - Xeonanis 75 9
|
CAGCGAUAGCUGAACAAUCUAUCUGAGGAUAUUCAUAUAAAACAUGAGGAUCACCCAUGUAAUUGGGAGAAGGCAGAUAGAUUG
| 3.65748
|
FMN
|
ON
| 22.349659
| 6.110672
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(.........(((((x((xxxx))))))).......)xxxxx)..........
| 3.106811
| 1.810037
| 2.177243
| 0.880469
| 1.296774
| null | 112
|
null |
#StaticStemDeletion - JL SNG1 3.00 18
|
CAGCGAUAGCUGAAUGGUACAUGGGAGGAUAUGGGUUACAUGAGGAUCACCCAUGUUAAAUAAUACUAGAAGGCCCAUGUACCU
| 3.623786
|
FMN
|
ON
| 16.483027
| 4.548565
| null | null | 2.533415
|
.....................................(((((x((xxxx)))))))............................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(.....(((((x((xxxx)))))))...........)xxxxx)..........
| 2.802331
| 1.514812
| 1.872763
| 0.585243
| 1.287519
| null | 255
|
null |
Inv Small Loop Excl NG3 cac2
|
CCCACGAAAGUCGAACGAUGUAGGAGAAGGACAAUAACAUGACAUGAGGAUCACCCAUGUGCCAUGUAGGAUAUCCUACAUGGG
| 0.989871
|
FMN
|
OFF
| 7.779725
| 7.859332
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
| 2.061702
| 2.051521
| 1.132133
| 1.121953
| -0.010181
| null | 114
|
null |
Copied & Modified
|
GCGGGUAAAGCAGGAUAUCUAAUGUCACGGAAACAUGAGGAUCACCCAUGUAGAGAAGGGCUAAGUCAUACAAUUCGAAUUUGC
| 0.911017
|
FMN
|
OFF
| 8.237295
| 9.041863
| null | null | 2.533415
|
................................(((((x((xxxx))))))).................................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(..............(((((x((xxxx)))))))..)xxxxx)........................
| 2.201865
| 2.108672
| 1.272297
| 1.179104
| -0.093193
| null | 148
|
null |
salish99_ExNG1_101 #endbits investigation
|
AUCCGGCGUGUAGGAUAUGGAUCCGAUUAGGAUCCAGAAGGACAUGAGGAUCACCCAUGUACAUGUAAACAGUCAUCACCGGAU
| 2.128559
|
FMN
|
OFF
| 14.019592
| 6.586424
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
| 1.88501
| 2.640456
| 0.955442
| 1.710888
| 0.755445
| null | 173
|
null |
JR #MainLoop #Static #NP InvSSNG2 Sub051
|
UGCUAAUUGUAGAAGGGUGACAUGAGGAUCACCCAUGUUCACAUGCGAUUUACGGCGCAUGUUCCACAGGAUAUACAGUUGAGU
| 5.679518
|
FMN
|
ON
| 341.64389
| 60.153676
| null | null | 2.533415
|
...................(((((x((xxxx)))))))..............................................
|
..........(xxxxx(.................................................)xxxxxx)..........
|
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
| 5.833769
| 4.096903
| 4.904201
| 3.167334
| 1.736866
| null | 141
|
null |
JR #DistanceClose #Static #StaticP #NP InvSSNG2 Sub057
|
AUCGGAUUGUAGAAGGGUGACAUGAGGAUCACCCAUGUUCAAAUGCGUUUUUCGGUAAUUGUUCCACAGGAUAUACUGUCCGAG
| 4.85656
|
FMN
|
ON
| 675.125074
| 139.013015
| null | null | 2.533415
|
...................(((((x((xxxx)))))))..............................................
|
..........(xxxxx(.................................................)xxxxxx)..........
|
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
| 6.514898
| 4.934568
| 5.58533
| 4.004999
| 1.58033
| null | 236
|
null |
Inv Small Loop Ecxl NG3 cac18
|
CACAAGAAAGUCGAACCGCUAUCUAGAAGGACAACAUGACAACAUGAGGAUCACCCAUGUCAUAUGUAGGAUAUGGAUGGUGGG
| 1.022446
|
FMN
|
OFF
| 9.140646
| 8.939977
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
| 2.190533
| 2.212731
| 1.260965
| 1.283163
| 0.022198
| null | 116
|
null |
Inv Small Loop Excl NG3 cac9
|
CACAAGAAAGUCGAAGGUUGAAGUAGAAGGUUUAUAACAUGACAUGAGGAUCACCCAUGUGCCAAGAAGGAUAUGCUUUAAUCG
| 0.827857
|
FMN
|
OFF
| 9.428924
| 11.389561
| null | null | 2.533415
|
.........................................(((((x((xxxx)))))))........................
|
........................(xxxxx(...................................)xxxxxx)..........
|
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
| 2.432697
| 2.243782
| 1.503129
| 1.314214
| -0.188915
| null | 173
|
null |
#StaticStemDeletion - Mat - Exclusion 2 - Eli Mod - D4
|
UCAGUAGAGUCAGGAUAUACGAAAGGCGAUCCAUACAUGAGGAUCACCCAUGUAGAAGGGACUCUACUGUAAGUCGGAAACGAC
| 0.070696
|
FMN
|
OFF
| 21.862295
| 309.245577
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
| 5.734136
| 3.084763
| 4.804568
| 2.155195
| -2.649372
| null | 81
|
null |
S-loop ExNG3 01
|
UGAUCGAGAGAUCUUAGAUUCUGGUAGGAUAUACAACAGUUGCGCUUUACAUGAGGAUCACCCAUGUAGAAGGACUAGAGUCUA
| 1.162187
|
FMN
|
OFF
| 8.778493
| 7.553425
| null | null | 2.533415
|
................................................(((((x((xxxx))))))).................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(................(((((x((xxxx))))))))xxxxx)..........
| 2.022001
| 2.172305
| 1.092433
| 1.242737
| 0.150304
| null | 183
|
null |
S-loop ExNG3 11
|
UGGACCGAGCUGUCGGUUGGCUCUUAGGAUAUGACAUGAGGAUCACCCAUGUGGGAUCUAAAUUGUCAGAAGGAGGGUUCUGGG
| 0.834918
|
FMN
|
OFF
| 40.328985
| 48.302945
| null | null | 2.533415
|
.................................(((((x((xxxx)))))))................................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(.(((((x((xxxx)))))))...............)xxxxx)..........
| 3.877493
| 3.69707
| 2.947924
| 2.767502
| -0.180422
| null | 64
|
null |
IX-NG1_55
|
CCUCAGAACAAGAAGGUGGGAGAAGAGUAUAACUAAGGAUAUUGAAAGGGAUGAACAUGAGGAUCACCCAUGUAAGGAAUCGUG
| 0.773498
|
FMN
|
OFF
| 40.871134
| 52.839346
| null | null | 2.533415
|
......................................................(((((x((xxxx)))))))...........
|
..........(xxxxx(.................)xxxxxx)..........................................
|
..........(xxxxx(.................)xxxxxx)............(((((x((xxxx)))))))...........
| 3.967256
| 3.710424
| 3.037688
| 2.780856
| -0.256832
| null | 132
|
null |
S-loop ExNG1 20
|
UUAUGUCGCGUAGGAUAUCACUAGUGUUGUAAUUUAAUUGUAAUUACGAUGUGAGAAGGACGUACACAUGAGGAUCACCCAUGU
| 0.796677
|
FMN
|
OFF
| 16.194154
| 20.327117
| null | null | 2.533415
|
.................................................................(((((x((xxxx)))))))
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(...................................)xxxxx).....(((((x((xxxx)))))))
| 3.011956
| 2.78465
| 2.082388
| 1.855082
| -0.227306
| null | 290
|
null |
S-loop ExNG1 01
|
UGAUAGGACAGAGGAUAUACGUAUAGUUACCUCUACAUGAGGAUCACCCAUGUAGAAGGCUGUCCUAUCUAAGUCGGAAACGAC
| 1.212535
|
FMN
|
OFF
| 5.778641
| 4.765751
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
| 1.561455
| 1.754169
| 0.631887
| 0.8246
| 0.192713
| null | 176
|
null |
WHB-IEX-NG1-MS2toclose10 #bad
|
GGGCCGUAGUAGAAGGGAUAUACGAUAGGUAUAUCAGGAUAUACAUGAGGAUCACCCAUGUUCUAACAGUGAUGGUCCUCCCUA
| 2.159506
|
FMN
|
OFF
| 373.580742
| 172.993609
| null | null | 2.533415
|
..........................................(((((x((xxxx))))))).......................
|
..........(xxxxx(.................)xxxxxx)..........................................
|
..........(xxxxx(.................)xxxxxx)(((((x((xxxx))))))).......................
| 5.153255
| 5.923134
| 4.223686
| 4.993566
| 0.76988
| null | 115
|
null |
IX-NG2_35
|
UGAUGAGGUUAGAAGGUACAGAGUAGUGGACCAAACAUGAGGAUCACCCAUGUCAUGGGAGGGAGUAAGGAUAUAAAGUUGUAG
| 0.803285
|
FMN
|
OFF
| 51.169036
| 63.699743
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxx(.................................................)xxxxxx)..........
|
..........(xxxxx(.................(((((x((xxxx))))))).............)xxxxxx)..........
| 4.154181
| 3.935135
| 3.224612
| 3.005566
| -0.219046
| null | 229
|
null |
SL-X-NG3_5
|
UGUGACAUGAGGAUCACCCAUGUAGAGGAUAUAGAGAUGAUGUUAGAGAAGAAUGUGUAGUAAGACUAGAAGGCUAUGUGUGUA
| 0.859781
|
FMN
|
OFF
| 28.205648
| 32.805616
| null | null | 2.533415
|
....(((((x((xxxx))))))).............................................................
|
........................(xxxxxx(...................................)xxxxx)..........
|
....(((((x((xxxx))))))).(xxxxxx(...................................)xxxxx)..........
| 3.4906
| 3.339522
| 2.561032
| 2.409954
| -0.151077
| null | 253
|
null |
SL SstateNG3 01
|
CGGCCGCUACGCCGGCUCGACGCACAGGAUAUGCAGUUACAUGAGGAUCACCCAUGUGGCCAUGUGCAGAAGGGUGAUUCGCGA
| 3.108562
|
FMN
|
ON
| 135.423591
| 43.5647
| null | null | 2.533415
|
......................................(((((x((xxxx)))))))...........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
| 4.908408
| 3.774247
| 3.978839
| 2.844679
| 1.13416
| null | 154
|
null |
SL-SS-NG1_25
|
GAGAAGAGUAUAGGAUAUUAAGAAACAUGAGGAUCACCCAUGUAGUGAGUGUGAGAAGGGUAGGAGGUGGUAGGAGGAUCCAGG
| 1.358175
|
FMN
|
ON
| 22.329819
| 16.441051
| null | null | 2.533415
|
........................(((((x((xxxx))))))).........................................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)........................
| 3.105923
| 2.799781
| 2.176355
| 1.870213
| 0.306142
| null | 77
|
null |
SL SstateNG3 11
|
ACAUGAGGAUCACCCAUGUUAAAUGAGGAUAUAUGACUGCACAUGAGGUUCACCCAUGUUCUACCGUAGAAGGUAUAAAUAAUU
| 0.941732
|
FMN
|
ON
| 71.681088
| 76.11626
| null | null | 2.533415
|
(((((x((xxxx))))))).................................................................
|
........................(xxxxxx(...................................)xxxxx)..........
|
(((((x((xxxx))))))).....(xxxxxx(...................................)xxxxx)..........
| 4.272227
| 4.332262
| 3.342659
| 3.402694
| -0.060035
| null | 132
|
null |
AtrosYaY3
|
UAUAUUUUUAUAGGAUAUGGAUAUGAUGCAUAUCCAGAAGGGUGAUUAUAAUAUAAUCUAUACAUGAGGAUCACCCAUGUUUAU
| 3.369014
|
FMN
|
ON
| 242.46009
| 71.967666
| null | null | 2.533415
|
.............................................................(((((x((xxxx)))))))....
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
| 5.490837
| 4.276217
| 4.561269
| 3.346649
| 1.21462
| null | 144
|
null |
SL-X-NG1_35
|
AGAGUUGACUCAGGAUAUACGGGAAUGUGCCGCGACAUGAGGAUCACCCAUGUAGAAGGGAGAGAGAAGAAGAGAUGUAGAAGA
| 0.96201
|
FMN
|
OFF
| 53.998277
| 56.130682
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
| 4.027683
| 3.988952
| 3.098114
| 3.059384
| -0.03873
| null | 73
|
null |
S-loop S-stateNG1 20
|
ACUAAGGAGGUAGGAUAUUGUGUGGUGGCCGGGCUCCCACGGCGAGCGGCACAAGAAGGAUCCCAACAUGAGGAUCACCCAUGU
| 1.871894
|
FMN
|
ON
| 48.877525
| 26.111269
| null | null | 2.533415
|
.................................................................(((((x((xxxx)))))))
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(...................................)xxxxx).....(((((x((xxxx)))))))
| 3.889318
| 3.262367
| 2.959749
| 2.332799
| 0.626951
| null | 210
|
null |
SL-SS-NG3_40
|
GGACAUGGGAAACCACAUGGAGAUAAGGAUAUAUAGAUGACAUGAGGAUCACCCAUGUAUGGCGAAUAGAAGGUAUGAGUGUGA
| 9.397985
|
FMN
|
ON
| 152.742187
| 16.252653
| null | null | 2.533415
|
.......................................(((((x((xxxx)))))))..........................
|
........................(xxxxxx(...................................)xxxxx)..........
|
........................(xxxxxx(.......(((((x((xxxx))))))).........)xxxxx)..........
| 5.028751
| 2.788256
| 4.099183
| 1.858688
| 2.240495
| null | 92
|
null |
IX-NG3_5
|
GGGUACAUGAGGAUCACCCAUGUAACGUGGAUAAGCUAUAAUAGAAGGAUAAGAGGAGAUGAGGUAUAGGAUAUAUCAUGGGUG
| 0.400847
|
FMN
|
OFF
| 17.096914
| 42.651947
| null | null | 2.533415
|
....(((((x((xxxx))))))).............................................................
|
..........................................(xxxxx(.................)xxxxxx)..........
|
....(((((x((xxxx)))))))...................(xxxxx(.................)xxxxxx)..........
| 3.753073
| 2.838898
| 2.823505
| 1.90933
| -0.914175
| null | 153
|
null |
S-loop S-stateNG1 01
|
UCAUUUAUUACAGGAUAUAUUAGUAUACAGUUGUUUGGUUAUUACAUAUUAAUAGAAGGGUAGAACAUGAGGAUCACCCAUGUA
| 1.965323
|
FMN
|
ON
| 234.045053
| 119.087321
| null | null | 2.533415
|
................................................................(((((x((xxxx))))))).
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(...................................)xxxxx)....(((((x((xxxx))))))).
| 5.455514
| 4.779857
| 4.525945
| 3.850289
| 0.675657
| null | 153
|
null |
Denovo 15
|
UAAAAGACUAGCUGGUAUCUCCACAUGAGGAUCACCCAUGUCUAGGAUAUGAGCAGCAAAGCUGCUUAGAAGGAGACGCUAGUC
| 1.151711
|
FMN
|
OFF
| 8.830997
| 7.667717
| null | null | 2.533415
|
......................(((((x((xxxx)))))))...........................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
......................(((((x((xxxx))))))).(xxxxxx(.................)xxxxx)..........
| 2.037019
| 2.178268
| 1.107451
| 1.2487
| 0.141249
| null | 203
|
null |
#HiddenHairpinInALoopBoosted - Mat - Same State NG 1 - JL mod - D3
|
GCCAUCGCAUGAGGAUAUGCUCCCGUUUCGGGAGCAGAAGGCAUGUCGUAAGACAUGAGGAUCACCCAUGUAGUUAAGAUGGCA
| 14.350674
|
FMN
|
ON
| 854.677972
| 59.556642
| null | null | 2.533415
|
....................................................(((((x((xxxx))))))).............
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)..........(((((x((xxxx))))))).............
| 6.750725
| 4.086928
| 5.821157
| 3.15736
| 2.663797
| null | 155
|
null |
JR #MainLoop #NP SSNG3 Sub062
|
UAAUGUGACAUGAGGAUCACCCAUGUAGACAUGGGAAGGUCGUAGGAUAUGCUGAUGAUUUUUUUGCAGAAGGACGUCAAGGAG
| 1.937958
|
FMN
|
ON
| 268.114218
| 138.348797
| null | null | 2.533415
|
.......(((((x((xxxx)))))))..........................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
.......(((((x((xxxx)))))))................(xxxxxx(.................)xxxxx)..........
| 5.591413
| 4.929778
| 4.661845
| 4.00021
| 0.661635
| null | 123
|
null |
JR #DistanceFar #Hairpin #Noisy #NP SSNG3 Sub067
|
CGCUAUUACAUGAGGAUCACCCAUGUAUAUAUUGUAUUUUCGUAGGAUAUGCAGAAGAUUAAAGUGCAGAAGGACGUAAUAGCG
| 3.895072
|
FMN
|
ON
| 29.138341
| 7.480823
| null | null | 2.533415
|
.......(((((x((xxxx)))))))..........................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
.......(((((x((xxxx)))))))................(xxxxxx(.................)xxxxx)..........
| 3.372055
| 2.012343
| 2.442487
| 1.082775
| 1.359712
| null | 80
|
null |
salish99_SLSSNG1_001 #endbits investigation
|
AGUUAAUAUCGAGGAUAUGUCUAGACACAUGAGGAUCACCCAUGUAUGUGUAUAGAAGGCGAUAUUAACAGCAUGUUACAUGCU
| 2.610923
|
FMN
|
ON
| 42.920594
| 16.438859
| null | null | 2.533415
|
..........................(((((x((xxxx))))))).......................................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(........(((((x((xxxx)))))))........)xxxxx)........................
| 3.759352
| 2.799648
| 2.829784
| 1.87008
| 0.959704
| null | 168
|
null |
#MS2NeighbourBaseDeletion - Eli xng 2.01
|
UGAUAGGACAGAGGAUAUACGUGCUAGAGAUACUAGCAAAAUUUCCUAACAUGAGGAUCACCCAUGUAGAAGGCUGUCCUAUCU
| 2.108757
|
FMN
|
OFF
| 14.185283
| 6.726846
| null | null | 2.533415
|
................................................(((((x((xxxx))))))).................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(..............................(((((x((xxxx))))))))xxxxx)..........
| 1.906106
| 2.652205
| 0.976538
| 1.722637
| 0.746099
| null | 252
|
null |
#MS2NeighbourBaseDeletion - BrourdMod - Jieux - Exclusion NG 2
|
GUCAGCUCGUGAGGAUAUACAACACUGCUUCGGCAGUGUAUUAAGAUAACAUGAGGAUCACCCAUGUAGAAGGCACGAGCUGAU
| 1.519401
|
FMN
|
OFF
| 8.476999
| 5.579171
| null | null | 2.533415
|
................................................(((((x((xxxx))))))).................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(..............................(((((x((xxxx))))))))xxxxx)..........
| 1.71904
| 2.137357
| 0.789472
| 1.207788
| 0.418316
| null | 214
|
null |
#InverseAptamerRotation - Ex NG2 #81
|
AAAUAAAGCAGUGUGGUAAGAUCACAUGAGGAUCACCCAUGUAAGGAUAUCUGUCCUAAAAGGACAGAGAAGGUACGUCACUGC
| 4.211293
|
FMN
|
OFF
| 79.64393
| 18.911989
| null | null | 2.533415
|
.......................(((((x((xxxx)))))))..........................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
.......................(((((x((xxxx)))))))(xxxxxx(.................)xxxxx)..........
| 2.939796
| 4.377566
| 2.010228
| 3.447998
| 1.43777
| null | 189
|
null |
#InverseAptamerRotation - BrourdMod 7 - Jieux - Exclusion NG2
|
UAAUAAAGCAGUGUAUUAAGAUCACAUGAGGAUCACCCAUGUAAGGAUAUGAGCAGAAAAUCUGCUCAGAAGGUACGAACACUG
| 3.405
|
FMN
|
OFF
| 32.396165
| 9.514292
| null | null | 2.533415
|
.......................(((((x((xxxx)))))))..........................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
.......................(((((x((xxxx)))))))(xxxxxx(.................)xxxxx)..........
| 2.252795
| 3.47804
| 1.323227
| 2.548472
| 1.225245
| null | 218
|
null |
#lol
|
UUUGUUUGCGGAGGAUAUAUAAGUGGAUCACCCAUAGAAGGCCGACAUGAGGAUCACCCAUGUUAGACAUGAGGAUCACCCAUG
| 1.369391
|
FMN
|
OFF
| 139.520823
| 101.885311
| null | null | 2.533415
|
............................................(((((x((xxxx))))))).....................
|
..........(xxxxxx(.................)xxxxx)..........................................
|
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
| 4.623848
| 4.938214
| 3.69428
| 4.008646
| 0.314366
| null | 118
|
null |
Inv S-state NG3 01
|
GCGUAACAUGAGGAUCACCCAUGUGCCCGAGAAUUCGGGCCGAGAAGGGUGACCGGUCGUAUGGCACAGGAUAUCGACGUUGUG
| 2.279898
|
FMN
|
ON
| 30.54736
| 13.398562
| null | null | 2.533415
|
.....(((((x((xxxx)))))))............................................................
|
..........................................(xxxxx(.................)xxxxxx)..........
|
.....(((((x((xxxx)))))))..................(xxxxx(.................)xxxxxx)..........
| 3.419278
| 2.595147
| 2.48971
| 1.665579
| 0.824131
| null | 140
|
null |
#StaticStemDeletion - Ex NG2 #81
|
AUCAGCUCGUCAGGAUAUACGUAAUGGUAAGAUCACAUGAGGAUCACCCAUGUAGAAGGGACGAGCUGAUAAGCACGAAAGUGC
| 3.527585
|
FMN
|
OFF
| 676.115582
| 191.665266
| null | null | 2.533415
|
..................................(((((x((xxxx)))))))...............................
|
..........(xxxxxx(...................................)xxxxx)........................
|
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
| 5.25575
| 6.516364
| 4.326182
| 5.586796
| 1.260614
| null | 120
|
null |
X-NG2_30
|
UGGAAGAGAAGAGGAUAUCCGUAGAUAACACAUGAGGAUCACCCAUGUAAGAGGGAUAGGUGAUAGGAGAAGGCUUAGAGAGGU
| 0.98019
|
FMN
|
OFF
| 14.940729
| 15.242684
| null | null | 2.533415
|
.............................(((((x((xxxx)))))))....................................
|
..........(xxxxxx(.................................................)xxxxx)..........
|
..........(xxxxxx(...........(((((x((xxxx)))))))...................)xxxxx)..........
| 2.7241
| 2.704091
| 1.794531
| 1.774523
| -0.020009
| null | 274
|
null |
X-NG3_15
|
GAAUGGGUAGAAGGACAUGAGGAUCACCCAUGUAGUGUGACUAAGGAUAUUAGAGAAGAUUGACGUAAGAAGGUAGAUGUGAGG
| 0.866857
|
FMN
|
OFF
| 116.556106
| 134.458306
| null | null | 2.533415
|
..............(((((x((xxxx)))))))...................................................
|
..........................................(xxxxxx(.................)xxxxx)..........
|
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
| 4.901254
| 4.758373
| 3.971686
| 3.828805
| -0.142881
| null | 159
|
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