id stringlengths 16 30 | sequence stringlengths 26 951 | secondary_structure stringlengths 26 951 | aligned_ids listlengths 2 10 | aligned_sequences listlengths 2 10 |
|---|---|---|---|---|
URS0001A24A5A_12908_1-76 | AGAGUCACCCUUAAGGUGCUCUUUUUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGUGAAAGCGGUUAGUGAAUC | ((((.(...........)))))...........(((((.(((.(((.((......)).)))))).)))))...... | [
"URS0001A24A5A_12908/1-76",
"URS0001A23365_12908/1-73",
"URS0001A244C4_12908/1-70",
"URS0001A233DF_12908/1-73"
] | [
"AGAGUCACCCUUAAGGUGCUCUUUUUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGUGAAAGCGGUUAGUGAAUC",
"---GAGCCCCUUAAAAGGCUCAUUAUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGGGAAAGUGGUUAGUGAAUC",
"-----AGCCCUUAAUGGGCUCUCUUUCUGCGUGUUAAUAGCUUUUCUC-UUGGCCUGGGAAAGCGGUUAGUGAAUC",
"--AGAGUCCGCUAAAAGACUCUGUAUCUGCGUGUUAAUAGCGUAUCCU-AUGGCCUGGGAACGUGGUUA... |
URS0001A24A6E_12908_1-80 | GAUAUGCGAUGAUGCAGAAGGUGGCCGCCCCUUGAGGCGGGGAAUUUCUGCGGAGUAUGUCCGAUUUACAAACCGGGCGA | .............(((..(((...(((((......)))))....))).)))......((((((..........)))))). | [
"URS0001A24A6E_12908/1-80",
"URS0001A2401D_12908/1-77",
"URS0001A248DB_12908/1-74"
] | [
"GAUAUGCGAUGAUGCAGAAGGUGGCCGCCCCUUGAGGCGGGGAAUUUCUGCGGAGUAUGUCCGAUUUACAAACCGGGCGA",
"---AUGCGAUGAUGCAGAAGGUGGCCGUCCUUUGAGACGGGGAAUUUCUGCGGAGUAUGUCCGAUUUUAAAACCGGGCGA",
"GAUAUGCGAAGAAGCGGGAGGUUGCGACAGUUAG----UCGGUUUUUCCGUGGAGUAUGUCCGAUUUU-AAACCGGGCG-"
] |
URS0001A24A71_12908_1-31 | GAUUACAAUUUCCUUUCUGUAAUCGCGGCUG | (((((((..........)))))))....... | [
"URS0001A24A71_12908/1-31",
"URS0001A24395_12908/1-29",
"URS0001A23DEF_12908/1-31",
"URS0001A241C3_679937/1-31"
] | [
"GAUUACAAUUUCCUUUCUGUAAUCGCGGCUG",
"GAUGCCA--CUCCUUUCCGUAAUCGCGGCUG",
"GAUUGCAUUUCCUUUCUGUAAUUCGCGGCUG",
"GAUUACAUCUUCUUCUCUGUAAUCGCGGCUG"
] |
URS0001A24A79_12908_1-77 | GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC | ((((((.........))))))..............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24A79_12908/1-77",
"URS0001A24A79_1115809/1-77",
"URS0001A24A79_1122980/1-77",
"URS0001A23C3D_12908/1-77"
] | [
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGCGGUCGUGUUAAUAGCUUUUCUUUUGGCCGAGAAGAGCG... |
URS0001A24A85_12908_1-82 | CUGAUCGAGACGUUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCAGAGAAGAAUAUCUCUCCGGAAACGUCGAAGAGUCAG | (((((...(((((.((((...(((.......))).))))..((((.((((........)))).))))))))).....))))) | [
"URS0001A24A85_12908/1-82",
"URS0001A23F03_12908/1-79",
"URS0001A24A94_12908/1-79",
"URS0001A2422E_12908/1-79",
"URS0001A23BE2_12908/1-80",
"URS0001A23B65_12908/1-79",
"URS0001A249C4_12908/1-79",
"URS0001A242E9_12908/1-79",
"URS0001A2476D_12908/1-80",
"URS0001A23843_12908/1-79"
] | [
"CUGAUCGAGACGUUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCAGAGAAGAAUAUCUCUCCGGAAACGUCGAAGAGUCAG",
"CUGAUCGAGACGAUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCGG--GAACACUCUUU-CCGGAAACGUCGGAGAAUCAG",
"CUGAUCGAGACGCUGGGCCAACGCCUGUGCAGCGUGCCCGAUUCCAG--GAGAACGUUGC-CUGGGAGCGUCGAAGAAUCAG",
"CUGAUCGAGACGCUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCGG--GG... |
URS0001A24A87_1628856_1-26 | UCCGUUGCUGGGUCGCCUGUAGCGGA | ((((((((.((....)).)))))))) | [
"URS0001A24A87_1628856/1-26",
"URS0001A238F5_1121018/1-26",
"URS0001A238CA_1214065/1-25",
"URS0001A23899_1223569/1-26",
"URS0001A23899_1225785/1-26",
"URS0001A23AC1_1336237/1-26",
"URS0001A23AC1_1005995/1-26",
"URS0001A23AC1_480813/1-26",
"URS0001A23899_1224149/1-26",
"URS0001A24282_1216966/1-26"
... | [
"UCCGUUGCUGGGUCGCCUGUAGCGGA",
"UCUGCUACUGGGUCGCCUGUCGCAGA",
"-CCGCUGCUGGGUCGCCUGUAGCGGU",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"UCUGCUGCUGGGUCGCCUGUGGCGGA"... |
URS0001A24A98_12908_1-28 | UAACCUCUGGCGAUGUUCGUGAACGUUG | ((((...(.((((...))))..).)))) | [
"URS0001A24A98_12908/1-28",
"URS0001A24699_12908/1-28",
"URS0001A23776_12908/1-28",
"URS0001A23358_12908/1-28",
"URS0001A2353F_12908/1-28",
"URS0001A243B7_12908/1-28",
"URS0001A23ADB_12908/1-28",
"URS0001A23351_12908/1-28",
"URS0001A248BD_12908/1-28",
"URS0001A23930_12908/1-28"
] | [
"UAACCUCUGGCGAUGUUCGUGAACGUUG",
"UAACCUCUGGCGAUGUCCGUGAAUGUUA",
"CAACCUCUGGCAAGAGAUGUUAACGUUG",
"CAACCUCUGGCGAUGUACGUGUAUGUUG",
"CAACCUCUGGCGAGCAUCGUGAACGUUG",
"CAACCUCUGGCGAAGUUCGCGAAUGUUG",
"CAACCUCUGGCGAGGGACGUGAAUGUUG",
"UAACCUCUGGCGAGGGACGUGAAUGUUG",
"UAACCUCUGGCGAGGGACGUGUAUGUUG",
"UAACCUCUG... |
URS0001A24AD5_12908_1-75 | CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCGCAGGCCUCGCGCCUCGCGGCUUGGGAGUGCGGACGUGC | .........((((..((((((..((......((((((..............))))))...)).))))))..)))) | [
"URS0001A24AD5_12908/1-75",
"URS0001A23DAF_12908/1-66",
"URS0001A244BE_12908/1-71",
"URS0001A248C4_12908/1-71",
"URS0001A248C4_1230455/1-71",
"URS0001A248C4_1194088/1-71",
"URS0001A248C4_1227468/1-71",
"URS0001A248C4_1227483/1-71",
"URS0001A23907_1498500/1-71",
"URS0001A24703_12908/1-72"
] | [
"CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCG-CAGGCCUCGCGCCU-CGCGGCUUGGGAGUGCGGACGUGC",
"AUGGGAACAGCACAGCCGCAUAUCCGACCU-----------GCCGCCCGUUCGGGUGGCUUGGGAGUGCGGCGGUGC",
"ACGGGAACAGCACAGCUGCAGAUCCGACUC----GCC-GGGGCCUCUUCGCC-CGCGGCUUGGGAAUGUAGCAGUGC",
"ACGGGAACAGCACAGCUGCAGAUCCGACUC----GCC-GGGGCCCUUUCGCC-CGCGGCUUGGGAA... |
URS0001A24AD7_12908_1-77 | GGGGAAAACACUUAGAAUCCCCGUGGACUAGAGUGUGAAUAGCAACGUCUUUGGCCGGACGUCGUGGUUCGGGAAUC | (((((............))))).............(((((.((.((((((......)))))).)).)))))...... | [
"URS0001A24AD7_12908/1-77",
"URS0001A2340A_12908/1-76",
"URS0001A235A0_12908/1-77",
"URS0001A23ED7_12908/1-75",
"URS0001A2424C_12908/1-76",
"URS0001A2370A_12908/1-77",
"URS0001A23919_12908/1-76",
"URS0001A23A81_12908/1-76",
"URS0001A24062_12908/1-76",
"URS0001A237AF_12908/1-76"
] | [
"GGGGAAAACACUUAGAAUCCCCG-UGGACUAGAGUGUGAAUAGCAACGUCUU-UGGCCGGACGUCGUGGUUCGGGAAUC",
"-GGGGAAACUCUUAGAAUCCCCG-UGAACAGGGGUGUGAAUAGCGGCGUCUU-UGGCCGGGCGAAGCGGUUCGUGAAUC",
"-GGGGAUACACUUAGAGUCCCCU-GGAUAGCGUGUGUUAAUAGCAACGUCCUGUGGCCGGGAUUUGCGGUUAGUGAAUC",
"-GGGGAGAGACUUAGAAUCCCCG-UGAGCC-GCGUGUGAAUAGCGGUGUCUU-UGGCCGG... |
URS0001A24ADC_12908_1-53 | CGGGAAUGCGCCCGCAGGGAUGUGACUGCGAAAAAAAGCAGUUGAACCAUAAA | ((((......))))..((.....(((((..........)))))...))..... | [
"URS0001A24ADC_12908/1-53",
"URS0001A23EC9_12908/1-52"
] | [
"CGGGAAUGCGCCCGCAGGGAUGUGACUGCGAAAAAAAGCAGUUGAACCAUAAA",
"CGGGAAUGCGCCCGCAGGGAUGUGACUGCG-AAAAAGGCAGUUGAACCAUAAA"
] |
URS0001A24ADF_12908_1-74 | GGGGACCUGUCACAGGGGCCCUAUAAACCACCGGCGGGCAAAUUCCCGUCGGCCAAGCAAACGGAAGACAGAAA | ((((.(((.......)))))))........(.(..(((......))).).)....................... | [
"URS0001A24ADF_12908/1-74",
"URS0001A24264_12908/1-64",
"URS0001A2344E_12908/1-64",
"URS0001A246D8_12908/1-67",
"URS0001A23CF4_366616/1-72",
"URS0001A2416F_12908/1-70",
"URS0001A23EE7_12908/1-66",
"URS0001A23D2E_12908/1-66",
"URS0001A23EDA_12908/1-66",
"URS0001A238EA_1294273/1-62"
] | [
"GGGGACCUGUCACAGGGGCCCUAUAAACCACCGGCGGGCAAAUUCCCGUCGGC---CAAGCAAACGGAAGACAGAAA",
"GGGGAGCUUC----GGCGCCCUAUA-CCCGCGGGUGGCAACACCCG--------UGCAAGCAAACGGAAGACAGAGA",
"GGGGAUCUUC----GGAGCCCUUCA-CCGCCGGGUGGCGACACCCG--------UGCAAGCAAACGGAAGACAGGAA",
"GGGGACCUUU----GGGGCCCUAUA---CACCAGCGGUCUUAAUCGGCCGCGC---UAAGCAAACG... |
URS0001A24AEB_1401073_1-76 | GGGGAAUUUUCUUAGAACCCCAUACGAUACGUGUUAAUAGUGUUGUCUUUGGCCGGGCAGCAUGGUUAGGUCAAGC | ((((.............))))............(((((.(((((((((......))))))))).)))))....... | [
"URS0001A24AEB_1401073/1-76",
"URS0001A23653_28125/1-74",
"URS0001A248DE_1122993/1-74",
"URS0001A23D54_649761/1-74",
"URS0001A23F78_12908/1-74",
"URS0001A247E2_12908/1-75",
"URS0001A232AA_12908/1-75",
"URS0001A23567_1236518/1-75",
"URS0001A23567_12908/1-75",
"URS0001A2470A_1227276/1-75"
] | [
"GGGGAAUUUUCUUAGAACCCCAUACGAUACGUGUUAAUAGUGUUGUCUUUGGCCGGGCAGCAUGGUUAGGUCAAGC",
"--GGGAUUUUCUUAGAAUCCCAUACGUUACGUGUUAAUAACAUAGUCUUUGGCCGGGCUAUGUGGUUAGGAAAAGC",
"--GGGGUACUCUUAGAGCCCCAUACGAUGCAUGUUAAUAGUGUUGUCUUUGGCCGGGCGACAUGGUUAGGUAAGGC",
"--GGGGUACUCUUAGAGCCCCAUACGAUACAUGUUAAUAGUGUUGUCUUUGGCCGGGCGACAUGGUUAG... |
URS0001A24AF8_987045_1-48 | UUGGUUCCGGUUCACGGUUCGGCACCCUGCCGCACCGACCCGGCGGCC | ..(((.((((....((((.(((.......))).))))..))))..))) | [
"URS0001A24AF8_987045/1-48",
"URS0001A2493C_12908/1-42",
"URS0001A236E2_12908/1-39",
"URS0001A247E4_12908/1-39",
"URS0001A23406_12908/1-39",
"URS0001A23B53_1120935/1-39"
] | [
"UUGGUUCCGGUUCACGGUUCGGCACCCUGCCGCACCGACCCGGCGGCC",
"UUGGCUCCGGUUCACGACGCGU------GACCAGUCGACCCGGCGGCC",
"CCGGCACCGGUUCCCGUGCAC---------CCACACGACCCGGCGGCC",
"UCGGCUCCGGUUCACGUGCGC---------GAGCACGACCCGGCGGCC",
"CCGGCUCCGGUUCACGUCGCG---------CGCGGCGACCCGGCGGCC",
"CCGGCUCCGGUUCACCCCGAC---------CCAGGGGACCCGGCG... |
URS0001A24B0C_12908_1-60 | GAAAGGCUGCCAUAUUUCGCCAUCCGGCAGCUGGGUGCAUACCGAGACACCCCAAUUAGG | ....(((((((..............)))))))(((((..........)))))........ | [
"URS0001A24B0C_12908/1-60",
"URS0001A23289_12908/1-48",
"URS0001A233CC_12908/1-56",
"URS0001A23363_12908/1-52",
"URS0001A236A8_12908/1-57",
"URS0001A23940_12908/1-57",
"URS0001A238F8_12908/1-57",
"URS0001A238F8_1226324/1-57",
"URS0001A23DB0_12908/1-57",
"URS0001A23DB0_1121115/1-57"
] | [
"GAAAGGCUGCCAUAUUUCGCCAUCCGGCAGCUGGGUG-CAUACCGAGACACCCCAAUUAGG",
"GAAAGGCGGCCGU----------AAGGCAGCUGGGUGUCUAUGC---ACACCCCAAUUAGA",
"GAAAGGCCGUCAA--AUCGCCG-GUGACGGCUGGGUG--UGACCGAGACACCCCAGUUAGG",
"GAAAGGCUGCAU---UUC-----CAUGCAGCUGGGCAUACUGGU-CUAUGCCCCAGUUAGA",
"GAAAGGUCGCUU---UUCGCCA-AAGGCGGCUGGGUGUUUUACCGAG... |
URS0001A24B1A_12908_1-81 | GGGAGUGCAUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC | ((((((..........))))))..............(((((.(((.((.((..........)).))))).)))))...... | [
"URS0001A24B1A_12908/1-81",
"URS0001A24298_12908/1-81",
"URS0001A231D7_12908/1-81",
"URS0001A23755_12908/1-74",
"URS0001A2375D_12908/1-75",
"URS0001A239FA_12908/1-75",
"URS0001A23B31_12908/1-76",
"URS0001A2324C_1392486/1-76",
"URS0001A24AA1_12908/1-76",
"URS0001A23FB6_12908/1-75"
] | [
"GGGAGUGCAUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"GGGAGUGUGUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"GGGAGUGUGUCUUAGAGCUUCCACAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"-GGGGGAAGGCUUAGAGCCCCCAGCCCG--GGAGUGUUAAUAGUGC--UGC-AU... |
URS0001A24B1D_12908_1-83 | CGCCGUGAACUGAGGGGUCCUGUCUCCCCCUUCAGAUCCGGUUGCGGGCCAUUCUGCCCGCCGACAUCAUAAGUGAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))..(((((........)))))...................... | [
"URS0001A24B1D_12908/1-83",
"URS0001A2328A_12908/1-77",
"URS0001A2354A_12908/1-76",
"URS0001A23AF8_338963/1-76",
"URS0001A23754_12908/1-75"
] | [
"CGCCGUGAACUGAGGGGUCCUGUCUCCCCCUUCAGAUCCGGUUGCGGGCCAUUCUGCCCGCCGACAU-CAUAAGUGAGAAGGAG",
"GUCCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCGGCGGGAUGUCCCGCCCAU---UACACGCAAGAAGGAG----",
"GUCCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCAGCGGGUAAUCCCGCUUAU---UAU-CGCAAGAAGGAG----",
"GACCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCAGC... |
URS0001A24B28_73044_1-48 | UCGGCUCCGGUUCACGCACCCGCAUUCCCGCGGUGGCGACCCGGCGCC | ..(((.((((....(((..(((........)))..)))..)))).))) | [
"URS0001A24B28_73044/1-48",
"URS0001A23F85_12908/1-47",
"URS0001A24008_12908/1-46",
"URS0001A23D1D_12908/1-45",
"URS0001A23B11_12908/1-39",
"URS0001A236FE_12908/1-47",
"URS0001A245DB_29306/1-48",
"URS0001A23D52_700597/1-47",
"URS0001A23B60_12908/1-47",
"URS0001A23B60_1463917/1-47"
] | [
"UCGGCUCCGGUUCACGCAC-CCGCAUUCCCGCGGUGGCGACCCGGCGCC",
"GUGGCUCCGGUUCACGGCC--AGCACCCCGCUGAGGCCGACCCGGAGCC",
"CUGGCUCCGGUUCACGUCC--CGCA-CCCGCGAGUGACGACCCGGCGCC",
"CUGGCUCCGGUUCACGGCA--CGCA--UCGGGUGUGCCGACCCGGCGCC",
"-CCGGUCCGGUUCACGUGCCUCGCG---------GCACGACCCGGCGCC",
"CCGGCUCCGGUUCACGCCC-CAGCA-UCCGUUGCGGACGA... |
URS0001A24B35_1121370_1-86 | ACUCAGGCACGAUCUGCGCCUUAUAUAUACGCACCAAUCAAGCGUUAUCUGCGCGCCGAACCGACCUGAAGUUCAAUCCUGAGGGA | (((((((.....((.((((.........((((.........)))).......)))).)).....)))).))).............. | [
"URS0001A24B35_1121370/1-86",
"URS0001A24ABF_196627/1-56"
] | [
"ACUCAGGCACGAUCUGCGCCUUAUAUAUACGCACCAAUCAAGCGUUAUCUGCGCGCCGAACCGACCUGAAG-UUCAAUCCUGAGGGA",
"ACUCGGGCACGAUCUG-------------------------GCAUCCGCUG------GAACCGACCUGAAGUUUCAAUCCUGAGGGA"
] |
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