id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
bpRNA_RFAM_2509
AAGACAGGCCGGGCAAUCGCGGUGGAUGCAAAUCCGUCGAGGAAGGUCCGGACUCCACAGGGCAGGGUAGCGGCUAACGGCCGUCCGGCCGUGCCGGCAGGCUUGCCUGCAGGCACGACCGAGGAACAGGGCCACAGAGACGAGUCUGCGGGGCGGGCGCGCCAGUCGCGCACCGGCACGGCCAUCUCCGUGCCGCGCGGUCCGGCAACGGGCGGCGGCAUCGCAGGGUGAAACGCGGCAACCUCUAUCCGGAGCAACACCAAAUAGGCAUGUGUGGGCCCCUGGGCCCGAAGGGCGGCCCGCCCGAGCAUGCGGGUAGG...
.(((((((((((((((((.((((((((.....)))))))....[[[.[[[[[[[[[...{{{{.[[[[[(((((.....)))))(((((............................)))).)[[...[[[[[.............(..(.((((....)))))))........((((((........))))))((((.(((((....))))).))).).................]]]..]]]]]]]]]]]]]...((((......((((((..................(((((.}}}}))))).)))))).....))...
bpRNA_RFAM_25106
UCCCGAUGAAGAAGCAAUCCCAUAGAUAGGAAGUGCCGUAUGACACUUUACACAACAACGGACUGAACGACGA
.............((..............((((((........))))))........))..............
bpRNA_RFAM_25107
GGAUAUGAUGAAAUGGCAAUAAUGUUUUGUGACACCCAGUCUGAUCUUCGUGAUUGAUUUGCCAUAUUUUCUGAUCC
.((..........(((((.........................................)))))..........)).
bpRNA_RFAM_25159
GGGGAUGGUGAGGGGUGCGAGCGCAGAGCCCCAGGGGCGGUGAAGAAGGAUUAUAACAGCGUCUGACC
..............(...................................................).
bpRNA_RFAM_25184
GUUUCAAUCCCCAAAGGGAAGGCUACAAAC
.(((.....(((...)))........))).
bpRNA_RFAM_2521
GUGGCGCAACGGAUAGCUGCUUGGGAAACCAAGAGGAAAGUCCGAGCUGCAGUGAGGCAGGGUUCCACCUAACCGGUGGCCAGCGAAGCCCUUUGGGAUAAGCUGAGGGAAAGUGCAACAGAAAGCAGACCGCCGAUGGCCUUUUGGCACAGGCAAGGGUGAAAGGGUGAGGUAAGAGCUCACCGCUUCUGUGGCAACACAGAAGGCAGUGUAAACCCAACCCGCAGCAAGUCGCACCUGGUUAAAGCCUCACAUUUUUGAGUGCGACGCUAGAGCUUAGUGGUGACACUAAGCGUAGAUAAAUAGCUAUCCACGACAGA...
.(((((((((((((((((.(((((....)))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((.................)))).)((...(((((............((((((((.(((....)))))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((.........(((((.]]]])))))......))))......((((((((....))))))))..........)))))))............
bpRNA_RFAM_25216
GUUCACUGCCGGACAGGCAGCACAGAAA
.....(((((.....)))))........
bpRNA_RFAM_25220
GUGUCCUGCCGCAUAGGCAGCUAAGAAA
.....(((((.....)))))........
bpRNA_RFAM_25223
AUUCACUGCUGAACAAGCAGCUUAGAAA
.....(((((.....)))))........
bpRNA_RFAM_25233
GUUUACUGCCGCACAGGCAGCUUAGGAA
.....(((((.....)))))........
bpRNA_RFAM_25285
GUAGCGCCCGUCUGUAAAGGCGGGCGAGGAUUGAAAC
....(((((((((....)))))))))...........
bpRNA_RFAM_25314
GUCUCCCGAGGCAGUAAUGCCUCGGCCUCAUUGAAAC
.....(((((((......)))))))............
bpRNA_RFAM_25329
CCUUCACCGACCCAACGCGGUCGGUCUCCGUUGCGGG
.....((((((((...))).)))))............
bpRNA_RFAM_25341
ACGCUCAACGCCUUUCGGCAUCACGGCGAGCGGGAC
.((((...((((............))))))))....
bpRNA_RFAM_25344
GUUUCAGAUGAACCCUUGUUGGGUUGAAGU
..........(((((.....))))).....
bpRNA_RFAM_25360
GUUUUAAUCCCCCAGAGAGGAUUCAGGUCUUUCGAAUA
..............((((((.......)))))).....
bpRNA_RFAM_25365
UCUGAAUAUAACUUUGAUGCCGUUAGGCGUUGAGCAC
...............((((((....))))))......
bpRNA_RFAM_25376
GUUUCCAUCCCCGUGAGGGGAAUAAGUGUUUUGAA
.(((....((((....))))....)))........
bpRNA_RFAM_25387
CUUUCCACACUAUUUAGUUCUACGGAAAC
.(((((..(((....))).....))))).
bpRNA_RFAM_25403
GUUUCAAUCCUCUACGAGGCUGACGGGGUUUGCAACG
.((.(((.((((............)))).))).))..
bpRNA_RFAM_25405
AUUUCCAUCCUCCAAGAGGUCUGAUUUUAAC
........((((...))))............
bpRNA_RFAM_25419
GCAACACUUUAUAGCAAAUCCGUUCGAUGCCUUGAAAU
....(((.....(((......))).......)))....
bpRNA_RFAM_25427
GUCGAGACGGACUGAAAACCCAGAAUAGGAUUGAAAC
.((((..((..(((......)))..))...))))...
bpRNA_RFAM_25434
GUUUCAAUCCCUAUCGGGUUUUCUUUUCCAUUGUGAC
........(((....)))...................
bpRNA_RFAM_25531
AAUGGCACCUCGGUUUUACCAGGUAGAAAUGUCCGGUUCGCUUUGGUCGGUGACGCCGGACGGGCAGGCCCACUUCGUGUGGGCUUUU
.........((((.....)).)).......(((((((((............)).)))))))....((((((((.....))))))))..
bpRNA_RFAM_25532
CUUAAUGAACAAGAAAACUAAGCGUACUUUCACCCCCGAGUUCAGGAUGGAAUGUGCACAGCUGAUUGUUGAUAAGGGCUACUCCUAUCGACAAGCCAGUGAAGCGAUGAAUGUCGGUUCUAC
......((((.............(((((((((..((((....)))).))))).))))...((((.(((((((((.(((...))).)))))))))..))))....((((....))))))))...
bpRNA_RFAM_25552
AGAUUAUCCAGGAGAUACACGAAUUAAUUCUGGCGGGUGAAAUGGAAGUCGCCAAAAGGAUGCUGCGCACGCUGAUUAAAGUCACGUUCGCUUAUCCUGCGAUUUUUGACGAGGUUCGGCAGGAAUGCCAAAUCAACAAUGCGCAUGUUGUCGCCGGAUGUGGAUCCGGGUAUCAAAGCGUUUAUAGCCGUUGUCAGAGCUGCAGAACAUCAGUCAGAAAAAGCAGCGGACCAGGGUAAAACCCACUGAGCCAAAAACCUGCGCGACGAACCGGUCACAGUGGCCGGUUUUUUU
..................................((((..................((...(((((...................................................(((......)))...........((((...(((...((((((....))))))....))).)))).........................................)))))...)).(((.....)))............)))).......(((((((((.....)))))))))....
bpRNA_RFAM_25553
GUUUUGCGGCAUCUUCUGCUCUGGUGGCUGCUGCUCCGGCAGCAGUACUGCUUUGCGCCGCCAGUGAUGCGCUGGUAUCAGAUGCGGCGGCGUGAUUGGAUGCCUCCGAUGCUGAUGACGAGGCGGCUGUUGCGCUGGCCGCUGCUGUACUUGCUGACGUUGCUGCGUUUGUCUCAGAUAUUUUUGCUGCGGCUGCCGAUGCGGUUGCCGCCUUUUCCGACGCUGCCGCCGCAGUGGCUGACGCACCUGCAUCACCGGCACUGGAGGCGGCCUGUGUUU
.....(((((.(((..((((..((((((((((((..(((((((................(((((((...)))))))(((((...(((.(((((......))))).)))...)))))((.((((((((.((((((.((((.(((((.((....))....((....(((((((...)))))))....)).))))).)))).)))))).)))))))).))....)))))))..))))))))....(((..)))..))))))))..))).)))))........
bpRNA_RFAM_25621
GUUGCUGUAAAUCCAGCAACCGGGUUUAGCAGCCUGGAACACAUCACAGCGCACAACCGCGCCUGCGGUUUUUUU
.((((((......)))))).(((((......)))))..................((((((....)))))).....
bpRNA_RFAM_25623
GCAUCUGGAAAUUCAGGUGCCGGGAUUGGUCUCCCGCCGAGAUUCACCGCGACAGAAUGACACGCCGCGAGCGUGUUUUUU
.((((((......)))))).(((((......))))).......................((((((.....)))))).....
bpRNA_RFAM_25624
GCAGCCGCAAAAUCGGCUGCCGGGAUUGGAACCCCGGACAUUACAAGAGCGCACAACCGCGCUAUAAGCGGUUUUUUU
.((((((......)))))).(((((......)))))..................((((((.......)))))).....
bpRNA_RFAM_25627
GCGCCAGCAAAAUCUGGCGUCGGGAUUGGCGUCCCGGAUGUUUACGGAGCGAUAUGAGACGCGCCCGCGUCUUUUUU
.((((((......)))))).(((((......)))))....................((((((....)))))).....
bpRNA_RFAM_25636
GCAUUGGCAAAAUCCAGUGCCGGGAUUGAGACCCCGCAAUAUCACAGGCGCAAUCAUGUCGCCAGCCUAGUGCUGGUUUUUU
.((((((......)))))).(((((......)))))........................((((((.....)))))).....
bpRNA_RFAM_25645
GCACCUCAUAAAGCGGGUGCCGGGAUUGGCGUCCUGGAAUUGCAUACGGCGACAAUGGGCGCGUUAGCGUCUUUUUU
.((((((......)))))).(((((......)))))....................((((((....)))))).....
bpRNA_RFAM_2565
GGAGUCGGCCAGACGGCCGCGGCACCGCGCACGCGGUGUCGAGGAAAGUCCGGACUCCACAGGGCAGGGUGGUCGGUAACACCGACCCGGGGUGACCCGCGGGAUAGUGCCACAGAAAACAGACCGCCGUCCCCGUGGGACGGUAAGGGUGAAACGGUGGUGUAAGAGACCACCAGCGGCCGGAGUGAUCCGGUCGGCUAGGUAAACCCCACCCGGAGCAAGGUCAAGAGGGAGACUUCGGUCUCCUGCACGGACGCUUGAGGGCGGCCCGUCCGAUGUCCGUGGGUAGACCGCAUGAGGCCGCUGGCAACAGCGGUCCU...
.(((((((((((((((((.(((((((((....)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((.............(((((((((....)))))))..)).......((((((.......)))))).(((((((((....)))))))).)..)))..)))))))))))))...((((........................((((((.....(((((.]]]])))))..)))))).....))))......((((((((....)))))))).....
bpRNA_RFAM_25658
CUACAAGCCUUAAAACGGAAACCAAGACCAUAAACUUCUGUUUGGGUCAUUUUAACAAAUGAUCUCGUUGGAGCCGUAGGAUCGCAAAUUGCGCGGUCAGGUAAUUGACGAGCUCACGCUUUAUCGCUGGUUUU
...................((((.((.............(.(((((...(((....)))...))))))..((((................))))..)).))))...(((.(((............))).)))..
bpRNA_RFAM_25666
UUAUCGCCCGAUCAUCCCGCCGGCUCUGCCAGUGGUAAACGGUUCUGCUCUGCAUCAGCAGUCCGCAUCCCCGCCGGACACUGAUACGGUAAGCCUCCCGCAGAAAAUGUACCGCCUGACGCUUCUGAGCCGGCCUC
.........................(.((............(.(((((...(((....)))...))))).)..((((................))))..)).)......(((.(((............))).)))..
bpRNA_RFAM_2568
GAAAGCAGGGGAGGUGAUCGCAAUUGAACUUCAGCAAAAAGCUGAAGAAUUCUAUUGAGGAAAGUCCGGGCUCCUAUUUGGCCAGGCUUGCUGGGUAAUUCCCAGUGCGGGUGACCGUGAGGAUAGUGCCACAGAAACACACCGCCUAACGCUUAAUGGGGAUAUCCCAACAAGCGCGGCAAGGGUGCAAAGGUGCGGUAAGAGCGCACCAGCAGCAUCGAGAGGUGCUGGCUAGGUAAACCCCGGCCAGGAGCAAGGCGAGGGGCACUGGAUGGCCAUAGACCUUGUCCCUGUAGAGAGCCGCUUGAGGCUAGCGGUAA...
.((((((((((.(((((((.(((((((((...................)))))))))....[[[.[[[[[((((.....[[[[.(((.(((((((.....)))))(((((....)))).)((...(((((...........(((((..((((((.................)))))))))..)).......((((((.......)))))).{(((((((.....)))))).)..)))..))))))))).))))...(((.((((((.....(((((.]]]]))))))))))).....).))}......((((((((.......
bpRNA_RFAM_25686
UCAUGUGAUCUAACGUAUCACGACUAAACGUAAGGGUAAAGCGGCUGGCAUGUCGUCCGGGCAUAAAGUCAUAUCGCCUGAACAGAGAACAUGUUACUGACUUUGAAACGCGAUUUUAUAAUUUGCUGUCCAAAAAUACGUGGCGCUGAAAGGCGCAUUUUU
...(((((((....).)))))).....(((((.(((((((((((.((((((((..((((((((((......))).)))))....))..))))))))))).)))).....((((.........)))).)))).....))))).(((((....)))))......
bpRNA_RFAM_25725
AGUAACGGAUUACUUUGUGGUGUAGCGUAACGGUAAUUGUCCUCCUCAUAUUUGCGGCAGCGUAGUCUGCCGCUUU
......((((((((.................))))...))))...........(((((((......)))))))...
bpRNA_RFAM_2577
UCAGUCGGCUGGACGGCCGCUCCCGCUCGGGCCGAAAGGCUUGCGGGAGAGGAAAGUCCGGGCUCCAUCGACAUACGGUGCCGGAUAACGUCCGGCGGGGGCGACCCCAGGGACAGUGCCACAGAGAACGAACCGCCGCGUCCACUUCUAUUCUCCGCUUGCCGGGGAGAGAACAGUGUGAGCGGUAAGGGUGAAAAGGUGCGGUAAGAGCGCACCGCGCCUCCGGCAACGGAGGCGGCAUGGUAAACCCCACCGGGAGCAAAACCGAAUAGGGACAGCAUAGCGAGGGGUUCGCCUUGGCGAUAACACCGCGGAGCCAU...
.(((((((((((((((((.(((((((((............)))))))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((....)))).)((...(((((............(((((((((((..................................)))))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((...................................(((((.]...
bpRNA_RFAM_25828
GUCGACGCAAACCGGAACCUCCAUCAACAGAUUGCGCAAUACUGAGGGACGUCGACGUCGGGGGAAACCCUCUCGCGAACCAGCGAGAUAAUGCGAAAGACCAAGACCGGAAAACAACUAAAGCGCCCAGUUGUGGCGCUUUAGUUUU
.(((((((.....((.....))............((((....))))..))))))).(((.(((....)))((((((......))))))..........)))..............((.(((((((((.......)))))))))))...
bpRNA_RFAM_2583
GCGGGUGGCCGGAUGACCGCGAGCCUUCGGGCGCGAGGAAAGUCCGGACUCCAUGGGACAAGGGUGCCGGGUAACGCCCGGCCGGGGCAACCCGAGGGAAAGCGCCACAGAGAACAGACCGCCCCACCGGCCUUCGGGCCCGGGGCAAGGGUGAAACGGUGGGGUAAGAGCCCACCGCGGGACUGGCAACAGGACCGGCAUGGCAAGCCCCACCCGGAGCAAUGCCGAAUAGGGGUUCCGCGCGGGCCUGAUCCUUCCGGGGAUAUCGCCGCAGGGACGUCUCAGCCCGAGGAACCCGGGUUGGCAGCUCGAUCCCGUCG...
.(((((((((((((((((.((((((....))))))....[[[.[[[[[((((...[[[[..((((((((((.....)))))(((((....)))).)((...(((((............(((((...((((((....)))))).)))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((...................................(((((.]]]])))))...)))))).....))))......((((((((...
bpRNA_RFAM_25830
GUUAGCACAAACCGGAACCUUGAAAGAGGGGUGCUGAUGCCGGGGGAAAACCCUCCUAGCCAGUGAGCAGGAUAACUAAAGGCCAGACCGAAAUUUUUGCAGUAAAACAAAGGCGCCUAGGGCGCUUUUUGUUUU
.(((((((.....((..))...........))))))).(((.(((.....)))((((.((......))))))........))).....................(((((((((((((...))))))))).)))).
bpRNA_RFAM_2585
AGAGCUUGUUAGGCAGUCGCUGUUUCGCAUCCUUUAUUGGGCGCGAGAUGGAGGAAAGUCCGGGCUCCACAGGGCAAAGUGCCAGGUAACGCCUGGGCGGCGCGAGUCGACGGAAAGUGCAACAGAAAGUAUACCGCCUAAGUCUGCUUCGGCAGACCGGUAAGGUUGAAAUGGUGCGGUAAGAGCGCACCGCAUGGCUGGUAACAGUCCAUGGCGAUGGAAAACCCCACUCGGAGCAAGACCAAAUAGGGACCCAAUGGCGUGGCCCACGCUGGGUCCGGGUAGGUCGCUAGAGGUGCAUGGCGACAUGCAUCCCAGAU...
.(((((((((((((((((.(((((((((..............)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((............(((((...((((((....)))))).)))..)).......((((((.......))))))(((((((((....))).))))).)...)))..)))))))))))))...((((......((((((...(((((.]]]]))))))))))).....))))......((((((((....)))))))).........
bpRNA_RFAM_25850
UCUACUUAAGCAAUGUAAGCCCUACCUGCUCUUACAUCCUUGCGACCCCUUAGUCGCGCCAGUGUGAAUAAGCAUCUUCCCUAAAACA
.................................(((..(((((((((....)))))))..))..))).....................
bpRNA_RFAM_25865
GCGAUGAGCUGAAUUGUGUAAGUCGAGGGACGAGCUUUCUAAGCAACGUGCGAUGUGGCGCGCGGUCUCUCGCCUCAAUACGCAGGCGCCUGUUUUCGAACAGGCGC
.............(((((.....((((((((..((.......))..((.(((......))).)))))))))).))))).......(.((((((......))))))).
bpRNA_RFAM_25869
GCGAUGAGCUGAAUUGUGUAAGCCGAUGUACAUGCCUUUACGGCACACACGAAUGUGGCGUGUGGUGCAUCGCCUCAAUACGCAAAGACGUUUGCCUUAGGCAAACGUC
.............(((((.....((((((((..((.......)).((.(((.......))).)))))))))).)))))........(((((((((.....)))))))))
bpRNA_RFAM_25874
GCAAUAGUGGCUUACGUGGGCGGUCGGCAUCACCUCGGAAAGGAGGUGAUGCUAUGGAGACGUUUCAGGCUCUUCAAUUAAUGUUCUUAUUUGGAAUGUUUAUUCUAGCGCUUUUAACGUUUAUCCAGAAAAUGAAAUAGAUCGCCCACGCUAAGGAAACGAUCUAUUUCGUUUGUAAACCUUAUUAAGCCGACCGCCUAGUAGCGCGGCUAUUGCCAGACCGUGGACGAUACCAGCGUCUGCG
.((((.(((((((.((((((((....(((.(((((.....))))).)))......(((((((......(((..........)))........((((................)))).)))))))..................)))))))).........(((......)))...............)))))).((((........))))..))))).....((((((((((...))))))))))
bpRNA_RFAM_2589
UCAGGUGGAGUUGUAGUCGCUGUGCUUUUUUUGCACAGAGGAAAGUCCGGACUCCAAGAGAAGAUGGUGGCAGGUAACUCCUGCCGGGGGUAACUCUAGGUUAGGGCCACAGAAAACUACCGCCCCGUAAAGGGGUAAGGGUGAAAAGGUGCGGUAAGAGCGCACCGUACUCGUGGUAACACGCAGUAGCAAGGUAACCACUACCAGGAGCAAGGCUAAGAAGGGCAUUAUGGCUUCUCUCAUUUGUUGCCCGGGUAAGCCGCAUGAGGCAUGCAGCGAUGCAUAUCCCAGAUGAAUGACUACAUAACACAGAAUCCGGC...
.(((((((((((((((((.(((((((.....)))))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((....)))).)((..(((((...........((((((((...))))))..)).......((((((.......))))))(((((((((....)))).)))).)..)))..)))))))))))))...((((.....((((((...(((((.]]]]))))))))))).....))))......((((((((....))))))))..........)))))))..........]]]]]]...
bpRNA_RFAM_25893
UUUGUGAGAAUCAUUCUCAGACCACUUCAGAGGGAGCCACUGGUGAUUUUUGUGUUCAUAAGUGCUUCUCUUUGGGGUUGUCUUGGUUG
...........((((.(.(....(((((.(((..((.((((.(((...........))).))))))...))).)))))....)))))).
bpRNA_RFAM_25894
AUGACUUUGUCAACAACAACACCCAAACACAAGCACUGACUUGAGCUCUGAAUUCAUUAAGUGCUUCUUGUUGGGGUAAUGUUGCUGA
..........((((.(.(..(((((.(((..((((((.(((..............))).))))))...))).)))))....)))))).
bpRNA_RFAM_2590
UCAGGUAAAAAAGUAGUUGCUGUAUUGUAAAGUACAGAGGAAAGUCCGGACUCCAAGGGAAAAUGGUGACAGGUAAUCCCUGUCGGAGGUGACUCUAGGUAAAGGGCUACAGAAAAUAACCGCCUUGUUACAAGGUAAGGGUGAAAAGGCGUGGUAAGAGCACACCGUACUUAUGGCAACAUAUAGUAGCUAAGUAACCACCACCAGGAGCAAGACUAAGAAGAGGUAUUUGUGUUUUCCCUCACAAUUACCCAGGUGAGUCGCGUGAGGUAGGUAGCGAUAUCUAUCCCAGAUGAAUAACUACAUAAACAGAAUCCGGC...
.(((((((((((((((((.(((((((....)))))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((....)))).)((...(((((...........((((((((...))))))..)).......((((((.......))))))(((((((((....))).))))).)..)))..)))))))))))))...((((......((((((.(((((.]]]].))))).)))))).....))))......((((((((....))))))))..........))))))).........]]]]]]...
bpRNA_RFAM_25908
AGAUAGAAAACCAGUUGACAUCAACUCUAACUUUAGCAUCUUUCUUUUAAGCAAAGUAGAAAGUGCUAUCAAGUUGGGGUAGAUGUUUGCUGA
...........((((.(.(....(((((.(((..((((.((.(((............))).))))))...).)).)))))....)..))))).
bpRNA_RFAM_25909
AAUCUAAAGCACAUUAAGAUCACUUCAAACAGGAGCAUUGAUUUGUCCUUUGUUCAUAAGUGCUUCUCUUUGGGGUAGUUUUAAUAA
.........((((.(.(..(((((.(((..((...((((.(((...........))).))))))..).)).)))))....)))))).
bpRNA_RFAM_25919
UACUGGCAAGUCUUUAUUGUUCCCUCAAAUUUAGCAUUCACUUGUCAUGUGAUAUCAGUAAGUGCUAUCUGUUGGGGCGGCUGUAGUUGA
...........((((.(.(..(((((.(((..((((((.(((..............))).))))))...))).))))).....)))))).
bpRNA_RFAM_25922
AUUGGGCUAGUCACUUGAAGUUACCCAAACACUGGCACUGACUUGACAUUUUCAGAUACAGUAAGUGCUACUUGUUGGGGUAAUUUUAUUGA
...........((((.(.(...(((((.(((..((((((.(((................))).))))))...))).)))))....)))))).
bpRNA_RFAM_25927
GUUGACCUUACAGCAAAUCUUAAAGCUACUUCAUUCUAAGAAAAACUCCUGUCAACUG
.(((((......................((((.......)))).......)))))...
bpRNA_RFAM_25931
GCUGACCUUACAGCAAUUCUAUCACUCUACAUUCCAAAGAAAUCCUUCGUCAGCUG
.(((((..................((((.........)))).......)))))...
bpRNA_RFAM_25938
GUUGACCUCACAGCAAUUAACUAGUUUUAAAGAAACCCCCUUGUCAACUG
.(((((..................((((...)))).......)))))...
bpRNA_RFAM_25946
GUUGACCUUACAGCAAUCUAAUCACAAAUUUUUACUUCACAAAAAAAAAACCCCUUCGUCAACUG
.(((((.......................((((.......)))).............)))))...
bpRNA_RFAM_2595
UCAGUCGGCCGGACGGCCGCUCCCGCACCGGCCGAAAGGCUGCGGGGGAGGAAAGUCCGGGCUCCAUCGACAUACGGUGCCGGAUAACGUCCGGCGGGGGCGACCCCAGGGAAAGUGCCACAGAGACCGAACCGCCCCGCGAAGCCGCAAGGCGAAGCGGGGUAAGGGUGAAAAGGUGCGGUAAGAGCGCACCGCGUCUCCGGCAACGGAGACGGCAUGGUAAACCCCACCGGGAGCAAAACCGAAUAGGGACGGCAUCGCGGACAGUUCGCUCUCGGGCGAUAACUCCGCAGGGUGAUGUCAAACCCGCCGUCCGGGUA...
.(((((((((((((((((.(((((((((...........)))))))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((....)))).)((...(((((............(((((((((((............)))))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((.....................................(((((.]]]].))))).))))))........
bpRNA_RFAM_25958
CCCGUGUCAGGCCGCAAAGCGCCACUUCGCCAAGGAGUGCAGCCUGUAUGGCCCCAGGAGGACUGGGU
.....((.((((.((....)).((((.........))))..))))).)....(((((.....))))).
bpRNA_RFAM_2596
GGAGCCGCCCGGGCGAACGCGUCGGUCCUGCAGGGAAGGGGGCCGCCGAGGAAAGUCCGGGCACCACAGGGCAGCGUGCCGGCCAACGGCCGGUCGGGGCGACCCGCAGGAAAGUGCCACAGAGAACAGACCGCCGAACGGCGCCGGGCGACCGGCGUGCGUGGCAAGGGUGAAACGGUGCGGUAAGAGCGCACCGCGCGCCGGGUGACCGGCGCGGCACGGCAAACCCCACGCGGUGCAAGAGCGAAUAGGGAGGCGUCCCACCCGCGCGAGCGGGAGGGCAAGACCGGCCCGGUCCAGGCCUCCGGGUAUGCUCGCUG...
.(((((((((((((((((.(((((((((...........)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((............(((((...((((((..........)))).)).)))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((..........................(((((.]]]])))))..))))))......)))).......
bpRNA_RFAM_25960
CCCGUGUCAGGUCACAUUGUGCCACCUUGCCAGAAGGUGCAACCUGCGAGGCCCCAGGUGGACUGGGU
.....((.(((((((().))).((((.........))))..))))).)....(((((.....))))).
bpRNA_RFAM_25969
CCACUCGGAAGUCGUCCAUUCCGAACCAUUAAACACUGUAUUCCCUCACAAUUCACUUUCACACUUGGAGUCGGCAUAUACGAGACAUACAUUCCCUUUUUAUAUAUCAGAUACUCAAAACCGAAACGCCAAACCCACCUUCGCGGUGGGUUUGGCGUUU
......((((...((((((.((((.(((.....................................)))..)))).....))).))).....))))............................((((((((((((((((.....))))))))))))))))
bpRNA_RFAM_2597
GGAGUGGAUCAGAUGAUCGCCGGCCUGCAGCAAGCAGACGGGAGGAAAGUCCGAGCUCCAGAGGGCAGGAUGGUCGCUAAUGACGACUGGAGGCGACUCUAAGGAAAGUGCCACAGAAAAUAUACCGCCCGACUCCGUUGGGUAAGGGUGAAAAGGCGAGGUAAGAGCUCACCGUUUUCCGGGUGACCGGAAAAGCAUGGUAAACCCCAUCCGGAGCAAGACCAAAUAGGAGAACAUUUGAGAGUGGCCCGCUCGACGUUCUCGGGUAGCGUCGCUUGAGGCAGCAGGCAACUGCUGUCCUAGAGGAAUGAUCAUCGCCA...
.(((((((((((((((((.(((((((((.....)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((.............((((((((....))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((.....(((((.]]]])))))..)))))).....).)))......((((((((....))))))))..........))))))).......
bpRNA_RFAM_25978
ACAGGCACGGUAUUGGUGGGACCAACACCAGUGAAUAUAAUUGGCAGAAAUAUAUUGACACAAAUUGGCUGUACUUUAAAUUUUCCUAUAAGUCCCAUUGAAACAGUGCCAGU
...(((((((((((((((((((........(((((((((...........)))))))))...((((((................)))))).)))))))))))))))))))...
bpRNA_RFAM_2598
AAAGUUAGUUGAACAGUCGCUAUUUAAUAUUUCUAUAUUAAAUAGAGGAAAGUCCGGGCUCCGUAAGGCAAGACGCCAGAUAACGUCUGGGAAGAGAAAUCUUACGACUAGUGCCACAGAAAAUAAACUAUCUAUAUAAUUUAAUAGAUACAGGUGAAAAGGUUCGGUAAAAGCGUACCGCAGAAUUGGUAACAAUUUUGGCUAGGUAAACAUCCGUCUGGAGCAAGGCUAAAUAAGAAGAGUAUAGCCUGUACUUAUCUUCGGGUAAGCUGCUUGAAUUAAUAAGUGAUUAUUAAUCUGGAUAAAUGACUGUGUAAACA...
.(((((((((((((((((.(((((((((........)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((............((((((((.....)).))))))...........((((((.......))))))(((((((((....)))))))).)..)))..)).)))))))))))...((((......(((((((((.]]]]))))).)..))).....))))......((((((((....))))))))..........))))))).........
bpRNA_RFAM_25981
CAAGGGACAGUGUUGGUGGGACCAACACCUGUCAAUAUAAUUGGGAGAAAUAUUUUAACACAGAUAGGGUGCACACUGGUAUUCCCUAUCAGUUCAAUUGAAACUGUCCCAGU
...(((((((((((((((((((........(((((((((...........)))))))))...((((((................)))))).)))))))))))))))))))...
bpRNA_RFAM_25990
GUUGGUACAGUGUUAGUAGGACCAACACCUGUUAAUAUUAUAGGAAGAAACUUUUUAACACAGAUUGGCUGUACUCUAAAUUUUCCAUUAAGUCCUAUUAAAACUGUACCAGU
...(((((((((((((((((((........(((((((((...........)))))))))...((((((................)))))).)))))))))))))))))))...
bpRNA_RFAM_25991
AUAAGUACAGUAUUAGUGGGACCUACACCUGUCAGNGUAGUUGGAAGAAAUCUAAUGUCUCAACUUGGUUGCACUUUAAAUUUUCCNAUUAGUCCCAUUGAAACUGUACCAGU
...(((((((((((((((((((........(((((((((...........)))))))))...((((((................)))))).)))))))))))))))))))...
bpRNA_RFAM_2600
GAAGUAAGCCAAGACAACCGCUGGCUGUCAUUUCGGUGAUGGCGGGAGGAAGGUCCGGACUCCAUAGAGCAGGGUGACGGUUAACGGCCGUCCGCCGUGAGGCGAGGAAUAGGGCCACAGAGACGAGCGUAUUAAGUUACGGUGAAACGCGGUAACCUCCACUCGGAGCAAUUCCAAAUAGGCACGCGUUGACGUUGCUCGCGGAGCGUGCGGGUAGGAAGCUUGAGCCGUGGAGUAAUUCACGGCCUAGAGGAAUGGUUGUCAUAACGCGUGGGUUCGCCCAUGCGUCGUAACAGAAUCCGGCCUAUCGGCUUGCUUCA...
.((((((((((.(((((((.(((((((((........)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((...........(((((....))))).......())))..)))))))))))))...((((......((((((......((.]]]])))).)))))).....))........((((((((....))))))))..........)))))))...................................]]]]]]]].).))))))))).....
bpRNA_RFAM_26021
GAUAUCCAAGAAUAAUUCGAGGGUCUAAUGUUGGGUUGAUUAAUCUAACUUCACCUCCACCAGGUGCCCAUGUAUCAUAAGCACCACCUAUGAAACACCAGUUUACAGACCAAGCAAGUGCUCCAACACCAAGGACAAUAAGAUGAUAUCCGAGAAUGUUAGUCAUCUGAUUUUUAUCUCUCCA
.............................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26027
CGUAACCAAAGAUAACACCUGGGUUUAAAGUAGGGUUAUCAAUGAUUCUUACAUCACCACCACCUGGUGCCCAUGUAUCGUAAAGACCGCCAACAUAUAAAGCUUUAAUAACUAGUAAUAGUGCUCCAAAUCCUAGGAUAACUAAGUGAAUACCAAGAAUUGUAGUAAUCUUGUUCUUAUCUCUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26057
GGUAAUUUGAUGGAGAGAGAAAAAGUAGUUUGGUUGCUAUUGCUCUCAGCUUCUUUUAGCCACUUUUGUUUCUUAAAAGUAUAGAGCUUUGAAUAAUUGAAGAAAAGCACCUAUACCUGGCAAGAUUAUGUGAACACCUAAAAUUGUUGUCAUUUUAAUUUCUAUCUUACCA
................................................................................................................................((((((..(((((.................)))))))))))...
bpRNA_RFAM_26067
GAUAGCCAAAAAUCACGGUAGAAUUCCAGGUAGGGUGAGAAAUAACUCGCACCUCACCCAAAUUGGCAUCAUACAAGCCGCCAAAAAACAUAGACUUGGCAACCAGUAAGCCAGCACCUAAACCCAGUAAUAUUAAGUGAAUGCCCAAAAUAGUUGUCAUUUUGUUGGCAUCCUCCCA
.......................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26071
UGUAGCUAAAGAUAACACCAGGACUUACUGUUGGGUUUGAAAUAAUACGAACAUCACCACCACCAGGAGCCCAUGUAUCAUAAAUUCCGCCAAAGUACAUUGCCUUCCAAACUAAAAGCCAAGCACCGAAUCCUAGUACGAUAAGAUGAAUACCUAAAAUAGUAGUCAUUUUAUUUUUAUCUUUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_2608
GAAGCCUGCCAGACCGCCGCUGGUGCAAUCUGGGAAACCAGGCACUGGAGGAACGUCCGGACUGCACAGGACAGCGUAGGAGGUAAUACCUCUCCACCGUGAGGUGAGGAUCAGAGCAACAGAGACGAGUCGCUUUUGGGUAACUCAAAAGCGGGUGAAACGGGCAAUCUCUACGCGCAGCAAUACCAAGUAGGCCAGCGUUGAUGUAGCUCCGCAGAGCUGGCGGGUAGGUAGCACCGAGCCGGGUGGGCGACCCCCGGCCCAGAUUAAUGGCGGUCACACCGGGUUUGCCGCAAGGCACAUCCGGCGCACAGAAUCCG...
.(((((((((((((((((.(((((((((...........)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((....)))).)((...(((((...........(((((((((((...)))))))))))........)))..)))))))))))))...((((......((((((......((.]]]].)))).)))))).....)).........((((((.((....))))))))..........)))))))......................................]]]]...
bpRNA_RFAM_2613
CCAGAGGGUCGGGCGAUCGCCGCUUUCGCAAGAAAGGGGAGGAAAGUCCGGGCUCCACGGAAACCACGGUGCCGGAUAACAUCCGGCGGCCUCCGCAAGGAGGUCAGGGAAAGUGCCACAGAGAGCAGACCGCCCACGGCUUCGGCCCGGCGAAAGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGACGGUAACGGACGCGGCACGGCAAACCCCACCGGGAGCAAGGUCGAAUAGGGAUGGCACGGGAAACCAGGGCUGGUUCCGGCCCCGCCGUCCGGGUUGACUGCUUGAGCGUUCGGGUAACCGUCCGCCUAGA...
.(((((((((((((((((..(((((((.....)))))))....[[[.[[[[[((((.....[[[[.((((((((((.....)))))(((((..........)))).)((...(((((............(((((((((((....)))))))))..))......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((............(((((.]]]].)))))..)))))).....))))......((((((((....))))))))........
bpRNA_RFAM_2614
CCGCUGGGCCGGACGGCCGCUGCUGCAUCGGUUUACGCCCGGUUCGCCGGGGCCGUACUGAUGUGGGGGAGGAAAGUCCGAACUCCGCAGAGUGGUGUGCCGGAUAACGUCCGGGAGGGCGCCGUUAAGGGCGUUCGACGGAAAGUGCCACAGAGAACAUACCGCCCGCCGCAAGGCAGGUAAGGGUGAAAAGGUGCGGUAAGAGCGCACCGGGCGCGCAGUGAUGCGCGUUGCAUGGCAAACCCCACACGGAGCAAGACCAAAUAGGGGAGAAGUUCGCGGGGCAACUCGCGAUGCGUGCUGACUCGGUGCGCCAAACU...
.(((((((((((((((((.(((((((((................................)))))))))....[[[.[[[[[((((...[[[[.((((((((((.....)))))(((((..............)))).)((...(((((.............((((((((.....))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((............................(((((.]]]]))))).)))...
bpRNA_RFAM_26155
GGUAGCCGUAGAUCACCCAGGGAUCGAGGGUGGGCUGCACCAGGCGAACGGUUUGCUGGGUGGCAUCGUACAACCCGCCCCAGGUGGUGGCUUUGGCGACGAGGAGCAGCGCCCCCGCCCCCAAAAACAGUAGGUGAUGACCGAGAAUCAUUCCUAAUUGGGCCGGAUUUUCCCA
....................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_2617
GCAGAGAGCCGGAUGGCCGCGUUGGGGCAUCUGCCCCCGCGAGGAAAGUCCGGACUCCCUGAAACGACGGUGCCGGGUAACGCCCGGGCAGGGCAACCUGACGGAAAGCGCCACAGAAAAGAGACCGCCUCGCCGCUCUGGAGGUUCGCCAAAGGAUGCGACGGGGUAAGGAUGAAACGGUGGGGUAAGAGCCCACCGCACCGCUGGCAACAGGGGUGGCACGGCAAGCCCCACCGGGAGCAAUGCCAAAUAGGGCCUCCGCGCGGGCAGGUCGGGCAACCGAAACCGCCGCUAGGGAUGUUUCACCCGAGAGAGGCCGG...
.(((((((((((((((((.(((((((((....)))))))))....[[[.[[[[[((((....[[[[.((((((((((.....)))))(((((....)))).)((...(((((............(((((((((((.......................)))))))))..)).......((((((.......))))))(((((((((....)))))))).)..)))..)))))))))))))...((((......((((((...................................(((((.]]]])))))...)))))).....
bpRNA_RFAM_26170
GAUAACCAAAAAGAAUACUUGGACUAAGAGUAAGGUUUGUAAUUUUUCUUACAUCCCCACCUCCGGGUGCCCAUGUGUCAUAGACACCGCCAAAGUACACAGACUUUAAUACUAAAAGGAAAGCACCAGCACCCAAUAGUAUUAAAUGAAUACCUAGAAUAGUGGUCAUUUUACUCUUAUCCUUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26192
GGUAACCAAAGAUAAUAUUGGGGUUUAGAGUAAGAUUCGUAAUUUCUCUUACAUCUCCGCCACCGGGUGCCCAUGUAUCAUACAACCCUCCGAAAUAGAGUGCUUUGAAAACCAGUAGGAAAGCGCCGAAACCUAGUAAUAUUAGAUGAAUACCGAGAAUUGUAGUCAUCUUAUUUUUAUCCUUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26224
AGUAUCCAAAGAUAAUGGCUGGGUUUAAUGUUGGAGUUGAAACAAAUCUUACAUCCCCUCCUCCUGGAGCCCAUGUAUCAUACACACCACCUACAAACAGAGCUUUAAUAACUAGUAAAAAUGAUCCAAUACCGAGUAAAAUUAAAUGGAUCCCCAAAAUUGUGGUCAUUUUGUUUUUAUCUCUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26243
AAUAACCGAAAAUUAUGCCUGGGUUAAGAGUAGGGUUAGUAAUCGAGCGUACAUCUCCCAAAUUAGUGUCAUAAAUGCCGCCAAAAAACAUGGCUUUUAGCACUAGUAAGAAUGCUCCUAAACCCAGAAUAAUUAGGUGAUGUCCUAAAAUCAAACUCAAUUGUUUAGGGUCAUUCCA
.......................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26247
GAUAGCCAAAAAUUACCCUUGGGUCAAGGGUGGGGUUGGUAAUGACGCGGACAUCGCCGCCACCGGGUGCCCAAGUGUCGUAGAGGCCACCAAAGAACAUUGCUUUGGCCACCAAAAGUAAAGCACCAAUACCGAGGACGAUCAGGUGGAAACCGAGGAUCGUCGUCAUUUUGUUUUUAUCUUUCCA
................................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26260
GAUAGCCGAAAAUUCUGACAGGAUUUAGGUUUGGCUGUACUAGUCGUACCUUUUCUACUAGUGGAUCAUAAAUACCGCCUAAAGCUGUUGCUUUUAUCACUAAUAGUGCUGCUCCAAGUCCUAACAACACUAGAUGGAUACCUAGAAUUGUUGUCAUCUUAUUGCCAUCUUCCCA
....................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26262
GGUACCCGAAGAUAGUUUGUGGAUUCAGAGUUGGUUCAGUAAUCACUCGUACAUUGGCGAUCGCCGGAUCGUACAAACCACUACCAUAAACGGCUUUGACUACCAGCAUCAAUGCUCCAAUCCCUAGUAGUACUAGAUGAAUGCCAAGAAUAGUAGUCAUUUUGUUACCAUCAUUCCA
.......................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26283
GUUUACAUCAUCUUUUAAUGAUGGGAGGCGGGUUGAAAAUUUACCUCCUGGAGCCCAAGUAUCAUAUACACCACCAAAGUACAUAGCUUUCCAAACAAGAAGCCAAGCUCCAAAACCUAAAAUAAUUAGGUGGAAACCUAAAAUGCUUGUCAUUUUGUUCUUGUCUUUCCA
................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26301
GAUAACCAUAAAUAACCAAAGGAUCUAAUGUUGGCUGACUGACUAGGCGCACCGUUUGGGUGGUGGCGUCGUACAAUCCCCCCCAAUACAUGGCUUUGCCUGCCAACAGUAGAGCUCCGGCCCCCAGGAACAGGAGAUGAUGACCCAAAAUUAUCCCUAGUUGCUGGGGGUUUUCCCA
.......................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26302
GAUAACCAUAAAUGACCGCUGGAUUAAGCGUCGGUUGUGUUACCAAACGGACUGUCUGACUGGCUGCGUCGUAUAGGCCACCCCAAGUUGUUGCCUUUGCCACCAGCAGCAAUGCUCCAACCCCGAGGAACAGCAAGUGGUGUCCCAGAAUGAGGCCUAGUUGUUUGGGAUCAUUCCA
.......................................................................................................................................((((((..(((((................)))))))))))...
bpRNA_RFAM_26318
UGGCAAUGAUGAUAAAAGGCCGGUCUUACGGCUGCCAUUUACGUAUUGGUAGUAGAUUGAUUACUUUAAGGUUUAGGGUUUUCUGAGCCAG
.(((..................................................................................)))..
bpRNA_RFAM_26319
UGGCUAUGAUGACAAAAAGGCCGGACUUACAGCUGCUUCCAGUGGGUUGGUAGUAGAAUGAUGAAGUUUUGCUAAGGUGAUUCUGAGCCAG
.(((..................................................................................)))..
bpRNA_RFAM_26322
GAGCUGUGAAGAAAUUUGAACUCAACGUGAUGACAGGGUCUAUAACUUUCGCCUGAUCCUCUUGGGACGAAAGCGAGUGCUUCUGAGCUC
.(((..................................................................................))).
bpRNA_RFAM_26329
GAGCUAUGAGGAUGAUACUCUCCUGUGAUGGGUGGGUCUAUCACUUUCAUCUGAUUCACAGAUGAUAAUGAGUGCUGCUGAGCUC
.(((.............................................................................))).
bpRNA_RFAM_26330
GAGCUAUGAGGAUAUUUUGCACCUUUGUGAUGGUUGGGUCUAUCACUCUCAUCUGAUAUGGAGAUGAAAGCAGCAGGUUUAACUGAGCUC
.(((..................................................................................))).
bpRNA_RFAM_26346
CGGCGAUGAUGAUGAAACAAGAUUACCAUCAAACUUUGAGAGGUUUUUCGCUCGUUGAUGUAAACUUCUUUUUAUAAUCUGAGCCU
.(((..............................................................................))).
bpRNA_RFAM_26348
AGGCAGCGAUGACGAGAAUCGUAUACCAUCAAACUAUGAAAGCUUGGAAGCUUGUUGAUGCUAUCUAGAAUCAUUACUCUCUGAGCCU
.(((................................................................................))).