id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
bpRNA_RFAM_5974
CUGAUGGAAGCGAUUGCAGACCAUCAAUUUAUAAACCUGUCAGUGGAGAAUAAAAUGCCCCUGCGCGAGGACCCCGGGGAGAAUGAACCGGGGGGCGAUGCGGGGGCAACAGCCCGGCCUCAGCGAGGUCCCCGCGGGAGGGCCUUCCGCGUCCCGGAGCACGAUGACCGCGGGAAACCCAGGCCGGGCACAGUUCUGGCCCGCCAGGGUUAGCCCGCCCAAGGGUGGCGUACGCCUUCGAUGAGGGCGGGAGUUACCGGCGGGCCAUAUUCUC
........................................................((((((((.......(((((((........)))))))......))))))))....((((((((....(((((...)))))..........((..(((((((....))))))).))..........))))))))........((((((((((......(((((((......(((...).))........))))))).....))))))))))........
bpRNA_RFAM_5992
AAGUGUUACAGCUCUUUUAGAAUUUGUCUAGUAGGUUUUCUGACUUCGGUCGGAAAACCCCU
.................................(((((((((((....)))))))))))...
bpRNA_RFAM_6037
CUUCAGUGAUGAUACGAUGACGAGUCGGAACAAAGCCGUCUUGUUCUGGGGGUUCGUGGUUCAGCUCUACGUUCUGUGGUUCUGUUCCAGUUCCUCAGUUCAGGGUCUUUUUCUCUUGAAGACAUAGAGGCAUUUGUCUGAGAAGG
.(((.........................................................................................................................................)))..
bpRNA_RFAM_6040
CUUCAGUGAUGAGACGAUCGACGAGUCAGAAGGACCAUCAAUGUAGUGUGUCUCGUGAGUGUCACGUUCUCUGCGAGCUGUGUUUCCGGCCGCCAUGCAUCAGCUUUGCCCCUUCUUACCUGAUCGAUAUGGAGGCAUUCGCUGAGACAGG
.(((.............................................................................................................................................)).)..
bpRNA_RFAM_6042
GCUAUGUGAUGAUACCCCAAUGUCUGACCACUCCGUAGUAGGUCCAUGGUGUGUAAAUGAUGGACUGCGUAGUUUCAAGACGGGACUGAUGGCAGC
.(((.....................................................................................)))....
bpRNA_RFAM_6055
UGCAGAUGAUGUGAAAAAAUACUUGCUAUCUGAAUGGUAGUGCUGACAUACAUAACCACCAAGAUCGCUGAUGCA
.(((...................................................................))).
bpRNA_RFAM_6088
AAUAGAUGAUGACAAUGUGUUUCGGUCCCAUAUGAUGUCCGGUGAUAAAACUGUUAACAUUUUUCUGAUGUU
.(((................................................................))).
bpRNA_RFAM_6097
CACUUCUCAAUGAGCUCCUUCCUGCCGACAUAUCCAUGGCAGCCUAUGGAUUCGCACGAGAAGGACAUAAACAGCUCAGUAGUGGCACGCUCACAACCUGGUUAUACAUCAGUUGUGAUUAACCACUUACUGUUCUACAAGU
..((((((.....(((((...(((((...........))))).....)))...))..)))))).................((...........((((.((......))))))......................))......
bpRNA_RFAM_6098
GCUUUCUCAUGAGCUCCUCUCUGCCGAUCAGUGGCGUUGUAUGGAUUCGCACGAGAAGAAGAGACUAAUCACAAAUUGAACAGGCACCCCCCUAAUCUCAACAGGUGUUGCCCAUGUCUGCUGUGAAACAAUU
..((((((....(((((...(((((.......))))).....)))...))..))))))..........((((((..............((((((.......)))))).............)))))).......
bpRNA_RFAM_6114
UGGAAGCUGGUUUCACAUGGUGGCUUAGAUUUUUCCAUCUUUGUAUCUAGCACCAUUUGAAAUCAGUGUUUU
.(((..((((((((...(((((....((((..............))))..)))))...))))))))..))).
bpRNA_RFAM_6118
UGGAAGCUGGUUUCAAGUGGUGUUUUAGAGUGCUGAUCAAAUGAAUCUAGCACCAUUUGAAAUCAGUGUUCU
.(((..((((((((...(((((....((((..............))))..)))))...))))))))..))).
bpRNA_RFAM_6130
GUUGAGAGGAACGUUGUCUGGCUCGAGGUGAUGGAGAUGGAAGAGUACUCUCUACUCACUCAUCACUAACUUUCAAUCUCGGACCAGGCUUCAUUCCCCCCAGC
.((((((((((((..((((((..(((....................................................)))..))))))..)))))))))))).
bpRNA_RFAM_6132
GUUCAGGGGAAUGGUGUCUGAUUCGAGACCAUUCGUCACAAGUAAACAGUAGCCUUGAGAAUGAUCUCGGACCAGGCUUCAUUCCCCCUAGC
.((((((((((((..((((((..(((........................................)))..))))))..)))))))))))).
bpRNA_RFAM_6135
GUUGUGGGGAAUGUUGUUUGGAUCGAGGAUAUCAUAAACGCAUACACAUGUUUAUAUGUUAUGAUGCAUUAUAUGACUGAUGUAAUGUACAUAUAUAUACAUACAUGCCACAUGGUAUCGUCGGACCAGGCUUCAUCCCCCUCAAC
.((((((((((((..((((((..(((..............................................................................................)))..))))))..)))))))))))).
bpRNA_RFAM_6139
GUUAAGGGGUUUGUUGUCUGGCUCGAGGCAUCCGGGACUCCGGUUUCUCCUUUCCUACUGGAGGCGCCUAAUUUCCGGCGAGCUCGGAGCCUCGGACCAGGCUUCAAUCCCUUUAAC
.((((((((((((..((((((..(((.................................................................)))..))))))..)))))))))))).
bpRNA_RFAM_6145
GGUGUCUGGAAUGGAGGCUGAUCCAAGAUCAUUGCUUGGUGCAAAAUACUAGGGCAUUGUUGUAAGUGCCAUUAGUUCUUUUUUGUUUCCGAGUUUGUUAUCGAGGAUCUCGGACCAGGCUUCAUUCCUCACACC
.((((((((((((..((((((..(((...................................................................................)))..))))))..)))))))))))).
bpRNA_RFAM_6146
UGAGGGGAAUGUUGUCUGGCUCGAGGUCACCAACUAGAUCCAUAAACUCCAUAUUAUGCUUUUUUGAAUAUAAAGAUUAGUUUUUCUUUUCUUUUCACUAGGAAAAUUUAAAGAUUAGUUGAUUAUAUUAAAAAGGGUUUAUGGAUCAUGAGUUAGUGUUGUCGGACCAGGCUUCAUUCCCCCCAAU
.((((((((((..((((((..(((.........................................................................................................................................)))..))))))..))))))))))...
bpRNA_RFAM_6179
GAAAGACGCGCAUUUAUUAUCAUCAUCCCUAAUUAUCAUUAUCAGAUAUUUCUUUUGGCCACAUUACUCAUGUGGCCUUUU
.......................(.((.(((........)))..))).........(((((((.......)))))))....
bpRNA_RFAM_6181
GAAUACGCGCAAAAUGUUAUCAUCCCUAUUUCUCUAUAGAAUUUAUUCAGCCACACAAAUUUUAGUGUGGCUUUUU
....................(..(.(.(......))..))........(((((((..........)))))))....
bpRNA_RFAM_6217
UUGUUAUAAUUUAAAUGUCACUAGGGAGUAGCUUCUCUUCUCUACAGAAGAUGGCUUACAUCAACAUACUUGAGCUUAGGCUUAUGGUGUAAGCGGUUUAAAUACUUGGCAAGACUUUUGACUACAAACACUUACUUAGGCUGUGGGUGCGUUGUAGUCAUUUGUUUAUGUCACAGCCUAGAGGACU
....(.(...........................................)).((((((((((.......(((((....)))))))))))))))(((((((...............................................................................)))))))
bpRNA_RFAM_6224
UUACGGAGUAAAGGGGAGUAGCGUCAGGGAAACCUGAAACAAAGUCGUCAUUACAUGGAGUAUUCCAUCGGCUUUGUUGGCAUAAUGAUUAUGCUUAGCAAGACCUUUGCCAUAUUU
........................(((......))).((((((((((.......(((((....)))))))))))))))(((((((...)))))))......................
bpRNA_RFAM_6225
AAAACUGUCAGAGGGGAGUAACUUGAGAAUAGUUAUUGAAUGCAUUUAAACCGAUAAUAACUAUUCAACACUUUGUCGUCAUUACGAAGAUAAGUCUUCCGGUAAAGUGGGCAAAAAUAUUGCUAAGUGAGACCUUUGCUAUUAAA
.........................(((....................................))).((((((((((.......(((((....))))))))))))))).(((((....)))))......................
bpRNA_RFAM_6227
ACAAAUGUCAGAGGGGAGUAGCGCUGAUUAGCUUUUUAAUCAGGAUAAAGUCGUCAUUACAUGAUAGAGAUAUCAUCGGUUUUAUCACAUUUAACUUUAAAUGUUAGCGAGACCUUUGCCUUUACG
........................(((............))).((((((((((.......(((((......)))))))))))))))(((((((....)))))))......................
bpRNA_RFAM_6232
CAAGUAGAAUAUUCCGGUCAUCGGGGAGUAGCUUCCUUCCGUCGAAUAGAAGGGCUUGCAUCAACAUACUUGACCCGUGGUCGUGGUGCAAGGAGUUCGUGCCUGGCAAGACCUUUGACCACAUUGUCUCCGGAAGGGCGGGGAGAAGCCUGGUCUCGCUUCUUGUCCGGCCUGGAGCGUA
..................................(((.............)))((((((((((.......(((((...)))))))))))))))(..((((............................................................................)))))
bpRNA_RFAM_6235
CCGUUAGAAUCCCCCGGUCACUGGGGAGUAGCCUUCCUUCAUCGUUUGAAGGAGAACGCGUCAACAUACUUGGCCUUGCAGGUCAUGGCGCGUUCGGCCGUGUCGGUUUGGCGAGACCAUUGACGCACUGCCUCGUUCUGGUCGGACGGGCGGCGGUGCGUCAUUGGUUUGUCGUCUACGUCCGACCGUGGAGUUG
...................................(((...........))).((((((((((.......(((((.....)))))))))))))))(.....(............................................................................................))
bpRNA_RFAM_6236
CUGGUACAAUUUUCAGGUCAUUGGGGAGUAGCCACUCUUUAUCACAAAGAGGCUUACAUCAACAUACUUGACCCACAGGUCAUGGUGUAGGCAGCCCUUCGCCUGGCAAGACCUUUGACUGCGAUGCUUCCACUAGGCCGGAGAUGUAUCGUGGUCAAUCGUCUUUUCCGGCCAGGAAAUUC
...................................(((.........))).((((((((((.......(((((....)))))))))))))))(........................................................................................)
bpRNA_RFAM_6244
CUGAUAUACUUCGCUGGUCAUUGGGGAGUAGCCGAUCUUCGCACUGAAGAUGCUUACGUCAACACACUUGGCCCACAGGCCAUGGCGUAAGCGGUUCACACGCUUGGCAAGACCUUUGACCACAACGCCUCCGUAUUAAGGCUGGGGAUGCGUCGUGGUCAAUUGUGUCUAAUCCAGCCUGAGAAUCGU
.(.............................................)...((((((((((.......(((((....)))))))))))))))(((((((.................................................................................)))))))..
bpRNA_RFAM_6249
GAGCAAUCCACUUCUUCGGUUGCGCCACGUAACAACAUCACUCAAACAACACUGGCUCAACCACCAGUUCCCUGGUGUUGGCGCAGUAUUCGCGCACCCCGGUCUGUCC
..................((((((((...........................))))))))............(((....((((.......)))))))...........
bpRNA_RFAM_6255
CUCCAUGCCACAUCCUCGCGACUAACGACAGGUCUUACUCCCUUAAGCACUCUCAUUAGCCGCGCGAACCUCUGUAACUGAAGAGCCUAAACAAAAACCACCACCAGCAUUUUUGUGCUGUUAUCUAUGAUGGCUUCUCAGAAGAAAAGGGGCCCUAUAUGGCCCCUUUC
.(((.((..(((....((((.(((((((........................)))))))...))))......)))..)))))......((...............................)).........................((((((.....)))))).....
bpRNA_RFAM_6257
CUUUGCACUACAUUCUCACGACUAAUGACAACCCUUAUCUUGCUUAUGCAGAUAAAGCCUCUCAUUAGCCGCGCGAACCUCUGUAAUGAAAGAUCCUAUUAACAACAAUACACUACUCUGUUUUGCUAAUGCUUCCUAGAAGAAAGGGGCCAAAAGAGGCCCCUUUCC
.(((.((..(((....((((.(((((((.................................)))))))...))))......)))..)))))......((....................))........................((((((......)))))).....
bpRNA_RFAM_6283
CAACGGCGGGGAUGCUGAAAGGAUUAGGACUCAGGACGAGGAGUCAGGAAGCGCCAGGAGGCGAAGACCACAGGAUAGUCAGGAUGACGCGCGUCUUGGAGACGUUUUACAGGGAAAAGGAAGAAACAGGGACCGUUGGACGCUAAGGGAAAGACAGGGUGAGUCGUUAGCGAACAGGGAAAGAAGAGCCCGUUAAGGGUGGUCAGUGAGGAAAAAGGCGACAGAGUAAUCUGUCGCCUUUUUUCUUUGCUUGCUU
....((((....))))............((((........)))).......((((....))))..((((.......))))..........(((((.....)))))..................(((((((..(((((((........)))...))))..))))))).......((.......))...((((.....)))).........((((((((((((((((....))))))))))))))))...........
bpRNA_RFAM_6310
ACUCCAUGAUGAACGGUAAAAUGACAAGCAUAUGCCUGAACUCAAAAAAGUGAUGUCAUCUUAACUACUGAGAA
..((...................................................................)).
bpRNA_RFAM_6348
ACUUAUGAUGAUUUUCAUUGGAAUCUCGUUCGUCUGAAUUCCUGCUGAUAUCUUUUAAAUACUGAUGUUA
........................(((...((((.........)))).).))..................
bpRNA_RFAM_6360
UUUUGAUGUGAUGAUUAUUACCGCCCCAGUCUGAUAAUUCAUGACUGAUUGGUUACUCUGAUCAAAU
..((...........................................................))..
bpRNA_RFAM_6374
CUCACCAGUGAUGAGUUGAAUACCGCCCCAGUCUGAUCAAUGUGUGACUGAAAGGUAUUUUCUGAGCUGUG
..((...............................................................))..
bpRNA_RFAM_6410
CCCGCACACGGUUAGAGCUUGGAGCUGAGGCCGGUCUCCGGCCGAUGAACUACCGAGUGUAGGUCGUGUGCCACAGCGAAGGACGGCGGGUUUUUUCGCUAACGCCACGAGGCCCUCGGUGGGCCGACGAGUGGAGUUUGAUAGUGACAUCUGCCACAGGU
...(((((((...................((((.....))))......................))))))).............(((((...............((((..(((((.....))))).....))))................)))))......
bpRNA_RFAM_6420
AAGCAGGAUUCAGACUACAAUAUAGCUGCUAAGUGCUGUGUUGUCGUUCCCCCUGCUUAAAAUAAAGUUGUUUCUUAACUAUACCUGUCUGCUAUUCUCCUGUAGCAGCCAGGGACGCUUGGUCUCAUACAU
..(((((.........((((((((((........)))))))))).......)))))...........................((((.((((............)))).))))...................
bpRNA_RFAM_6434
GUGAAUGAUGAAUUUAAUUCUUUGGUCCGUGUUUAUGAUGGGAAGUAAGACCCCCGAUAUGAGUGACAAAAGAGAUGUGGUUGACUAU
.((.................................................................................))..
bpRNA_RFAM_6444
GUGGCCGGCAUGGCCCCAGCCUCCUCGCUGGCGCCGGCUGGGCAACGAUCCGAGGGGACUGUCCCUCUCGAGAAUCGGCAAAUGGGGCCCC
..(((((((..[[[[[[[(((.[[.....))))))))))]]....(((((((((((.(...)..))))).)).)))).....]]]]]]]..
bpRNA_RFAM_6486
GGCGAUGACGAAGGGUGACGUCCCUGAGUGGUGAUGAAGCCCGCGAUAGCUGAGCA
.((..................................................)).
bpRNA_RFAM_6499
UGCGAUGAUGAUAACUCCCUGACCUGAAAGGUGAUGAGGACCGGUUCACUGAGCU
.((.................................................)).
bpRNA_RFAM_6506
UUGUCAGGUAAGAUACUUCUUACCUGUUCCUCUUUUUGGAGGGCAGAAUAGAAUGUGAUGAUUGGAGCUCGAAUGAUUUAUGAUUAAGGGCUCUCCAUAAUCAGGACUUGCAACACCCUGACUACACCUAUCUGAU
.......................(((.((((((....)))))))))............................((.((((....).))).))...(((((((((...........)))))))))...........
bpRNA_RFAM_6520
UCUUCAGUGAGGUGCAUCCUUACCUGUUACUCCCUACCAAGGAGUAUCAGAUCAUGAUGAAUGGGGAAUCAUGAGAUAUGAUUAAAAUCUCCAUCUUAUAGGGAAAGCAACACCCUAUUAGAUCCAUUCUGAU
.......................(((.((((((.......)))))).)))......................((.((((....).))).))....(((((((...........))))))).............
bpRNA_RFAM_6526
UGAUCAGAUAGGAUAAUUCUUACCUGUUCCACCUCUUGGAGGGCAGAACAGAACAUGAUGACUGGAGUUUGCAUGAUUCGUGAUUAAGGUCGCUGCGUGGUCAGGUGUUGCAACACCCUGAUUGCUACACCCUGAU
.......................(((.((((((....)))))))))............................((.((((....).))).))...(((((((((...........)))))))))...........
bpRNA_RFAM_6540
UCAUCAGUAUGGGUCAAUCUCUGAUCUGCAACUGAACAUGAUGAAAACGGGCGAUGAUCCUUUGGUGAUUAUAACGCACGGCGAGGAGGGAACGCAAUACCCACCUGUCUGCCCGAAUCUGAG
.................(((..(.....)))...).......................((.(((.(....)))).))...(((((((((...........)))))))...))...........
bpRNA_RFAM_6613
UCCUACUGAGGAAACAUGCACAUGUCUUGCCUCCUGUCCUAGUCCCCGAGCCAGUAAAGGGGACCCCACAGGGGCUGGCUGGGGAAGAAGAGGAGUUUUUUCUAGAAGGAACUGUCGAAGGGAU
.(((...................................................................................................................)))..
bpRNA_RFAM_6631
AGAUAUGAGAGCUAUCUGGCUGUGACAUCUGUCACCCCACUGAUCGCCAGGGUUGAUUCGGCUGAUCUGGCUGGCUAGAUGGCUGUCCCCUUCCUCCCUCACCCCUCCAUGUGUGUCCCUCCCAAAACUGCAUGCUCGUUCGAAGAGGACAACCAUCCCCAAUAGAGGAGGACCAGUCUUUGGUCGAGGGUAUAUGAGUAGCUGCACUCCUCUGCCAGAAUCUCCAAACAAGCUCUCAAGAAUACACACAUAAGCAGUUAGUAUAGACAGUUGCUAUUACAUUCAUAAGUUUGUUCUGUAAAUAAGGUUUUUAU
.((.(((((((.((...((....((((((((((.(((((..(((((((...........))).)))))))..))...)))))))))).)).))..)))))))...))........((((((((((.((.....))))))(((....(((......))).)))..)))).)).............................(((...((.(....(......((((..(..................))))...))))..)))......................(((..((((.....))))).)......)).
bpRNA_RFAM_6651
GGAUGUGAGGGCGAUCUGGCUGCGACAUCUGUCACCCCAUUGAUCGCCAGGGUUGAUUCGGCUGAUCUGGCUGGCUAGGCGGGUGUCCCCUUCCUCCCUCACCGCUCCAUGUGCGUCCCUCCCGAAGCUGCGCGCUCGGUCGAAGAGGACGACCUUCCCCGCUAGAGGAGGACCGGUCUUCGGGUUCGGUCAAGGGUAUACGAGUAGCUGCGCUCCCCUGCUAGAACCUCCAAACAAGCUCUCAAGGUCCAUUUGUAGGAGAACGUAGGGUAGUCAAGCUUCAAAGACUCCAGACACAUCCAAAUGAGGCGCUGCACGUG...
.((.(((((((.((...((....((((((((((.(((((..(((((((...........))).)))))))..))...)))))))))).)).))..)))))))...))........((((((((((.((.....))))))(((....(((......))).)))..)))).))...................................(((...((.((((((......((((..(((((.............))))).))))...)))))).))...)))......................(((.((((((((((........
bpRNA_RFAM_6653
GGAUGUGAGGGCGAUCUGGCUGCGACAUCUGUCACCUCAUUGAUCGCCAGGGUUGAUUCAGCUGAUCUAGCUGGCUAGGCAGGUGUCCCCUUCCUCCCUCACCACUCUGUACACGUCCCUCCAGAAGCUGUGUGCUCAGUUGAAGAAGAAGGCUUUCCCAGAAUAGAGAUGGACCUGUCUUAGGUCGAGGGUAUAUGAGUAGCUGCGCUCCCCUGCUAGAACCUCCAAACAAGCUCUCAAGGAAACUGAUUAUUGACAAUUCAAGAAUAGAUUUACUUUAAUAUAAUUUUCUGGGAUGCUCUUUCUUU
.((.(((((((.((...((....((((((((((.(((((..(((((((...........))).)))))))..))...)))))))))).)).))..)))))))...))........((((((((((.((.....))))))(((....(.(......)).)))....)))).))..............................((...((.(...........((((..(.................))))...))...)))...................(((.((.((((..)))))..).)..)))
bpRNA_RFAM_6655
AGAUAUGAGGGCGAUCUGACUGUGACAUCUGUCACUCUAUUGAUCACCAGGGUUGAUUCGGCUGAUCUAGCUAGCUAGGCAGGAGUCCCCUUCCUCCCUCACCACUCCAUGUGCUUCCCUCUUGAAGCUGUGCACUCGGUGAAAGGAUGCCAUCUUCAGUCAAGGGUAUACAAGUAGCUGCACUCCCCUGCUAGAACCUCCAAACAAGCUCUCAAGGUCCAUUUGUAAAAGAACAUAGGGUAGUCAAGCUUCCAAGACUCCAGACACAUCUGAAUGAGUUGCUGCAUGUGGCAGUCUGCCUUUCUUU
.((.(((((((.((...((....((((((((((.(((((..(((((((...........))).)))))))..))...)))))))))).)).))..)))))))...))........((((((((((.((.....)))))).)))).)).............................(((...((.((((((......((((..(((((.............))))).))))...)))))).))...)))......................(((.((((((((((.....)))))..)))))..)))
bpRNA_RFAM_667
ACGUUCGGUCAUACUAGUGACACAUGCGCCUGAACCCAUUUCGAAUUCAGAAGCUAAGCGCCCUCAGGCUUGGUUAGUACUGAGGUGAGGGAUCCACUCGGGAACCCCAAGUGCCGUACGUU
.((((((((....((.(((.((...((..((((((.......))..))))..))....)))))..))(((.((....(.((.....((....))......)).)..)).)))))))))))..
bpRNA_RFAM_6704
GGCACUCUUCCGUGGUCUGGUGGAUAAAUUCGCAAGGGUAUCAUGGCGGACGACCGGGGUUCGAACCCCGGAUCCGGCCGUCCGCCGUGUAUCCUGACGGUUACCGCCCGCGUGUCGAACCCAGGUGUGCGACGUCAGACAACGGGGGAGCGCUCCUU
.(((((((((((((..((((((.............((((..(((((((((((..((.((((........).))).)).)))))))))))....(((.(...........)))).....))))..........)))))).).)))))))))))).....
bpRNA_RFAM_6784
UGCCGAGCUGCAUGCUUCUUCUACAUGCCCAUACUAUAUCGUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA
.......(((((((((((((.(((((.((.(((................))))).)))))))))))))))))).......
bpRNA_RFAM_6790
UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC
........((((((((((((((((((.((.(((.............))))).)))))))))))))))))).......
bpRNA_RFAM_6811
UGACAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCGCAAGCUCGUUUCUAUGGGUCUGUGGCAG
.((((((..(((..(((((((((((((((.............)))))))))))))))..)))..))))))..
bpRNA_RFAM_6844
GUCCGUCUACCCGUAGCUCCUAUCCAUGUUACUGGUCAAAAAGUGAACAUGGAAGCAGGUACAGGUGCACGGCGA
.((((((..(((..((((((((((((.(((...............)))))))))))))))..)))..))))))..
bpRNA_RFAM_6852
GGGUCGAUGAUGAGAACCUUAUAUUGUCCUGAAGAGAGGUGAUGACUUAAAAAUCAUGCUCAAUAGGAUUACGCUGAGGCCC
.(((((.((..............................................................)).))..))).
bpRNA_RFAM_6877
CGAAUUUGGUUACUGCGCUCCUCCAAGCCAGUUACCUCGGUUCAAAGAGCGCCAACUCCUCGAACCUUCGAAAAAACCGCCCGCCAAGGCGGUUUUUUCGU
.......((((((((.(((......)))))))))))..((((((((((((....))))))))))))..(((((((.((((((....))))))))).)))).
bpRNA_RFAM_6898
GGAUUGUGUUGACUCCCACAAAUGCAUUCCUUGGGAGUUUGAACAAAAUGAGUGAGCAGUCCUUGUGGUCUUCUCAUUAGAAUUAAGUUCC
.((((...................(((((.(((..........)))...)))))................................)))).
bpRNA_RFAM_6909
AGAUCGAUGUUGCCUCCCCCGUCAGCAUUCCUCAGGAAAGCUGAACAAGUGAGUGACAACUCCCUGCCGUCUUGUUCAUCACACUGAGGUGC
..(((....................(((((.((.(..........)....)))))................................)))))
bpRNA_RFAM_6935
GGAUCGAUGAUGACUUAAAAAAAUGGAAACCUUGGAAAUCUGAACAAAAUGAGUGACCAAGACACUUCUGUGAGCUGAGGUCC
.((((....................(((((.(((..........)))...))))).......................)))).
bpRNA_RFAM_6945
GUUGUGUUUUAAAAUUUGAAGAAAACCAGCUUUCAAGUGCCUUUUGCAGUUAAUUGGAGAGCGCAAGAUAGGGA
....(((((((((.................)))...((((.(((((........)).)))))))))))))....
bpRNA_RFAM_7008
UUGACAGCGUCGCUUUUUUGACCUAAAUUUCUCGGUGAAGGGUGAGGGAGGCGAACCUCCCUCCUGCGUACUCACUGUUAAUAUGCUGGGCAAGCGAUGAUUAACAGGAUCAGCAGCAUGAUGACGUAUCUCAUCAUCGUCCCUUUCCUUUUU
...............................((((..((((((..(((..........)))..((((.............................................))))(((((((........)))))).)))))))))))....
bpRNA_RFAM_7023
GUUGGCCGGGUUAGCAUAGCGCCACCCGGCACCCUUUCUUUCUUUUAAAUCUGGAGUUUUAAAAUGUCUCUAAGCGUUGAAGCUAAAGCAAAAAUCGUUUCUGAGUUUGGUCGUGGCGAA
......((((((..........)))))).....................(((((((...........)))))))..............................................
bpRNA_RFAM_7030
CGUGUCGGCUGAAUCAGAGAUUGGCUGGCACAAACUUAAACCUCAAACUCUUUAGGAGAGAAUUAUGUCUCUGAAUGCAGAAACUAAAGCAGCAAUCGUUGCUGAAUAUGCACGUUGCGAA
......((((((........)))))).........................(((((((..........)))))))..............................................
bpRNA_RFAM_7032
UGUCAUCGCUGAGUUAGAGAUCGGCGAAUGAUGUAUUAACAACACUACCUUUUAGGAGUAAAAAAAUGUCUCUAAGUACAGAAAAAAAAGCAGCAAUCGUUGCUGAAUUUGGUCGUGAUGCG
......((((((........))))))........................(((.((((...........)))))))..............................................
bpRNA_RFAM_7043
UGGGAUCGCUGAAUUAGAGAUCGGCGUCCUCUCAUUCUUAAAUACUUUGGAGUUUUAAAAUGUCUCUAAGUACUGAAGCUACAGCUAAAAUCGUUUCUGAGUUCGGUCGUGACGCA
......((((((........))))))...................(((((((...........)))))))..............................................
bpRNA_RFAM_7062
UGGCAUGGCUGAAUUAGUGAUCGGCCUGCUGUAUUUUAGCUCUUAUAUUGGAGAAAGUUAUGUCACUAACUACUCAAGAAACUGCAGCAAUCAUUGCUGAUUAUGGCGUAAAAGAA
......((((((........))))))....................(((((((..........)))))))..............................................
bpRNA_RFAM_7083
CGUUUUGGCUGAAUUAGUGAUCGGCUAAAGCACCUUUUAAAUUUAAUUUUUGGAGUUAUUAUGUCACUAAGCAAUCAAGAAAAAAUCGAUAUCAUUGCUAAAUUCGCACGUGCUGAA
......((((((........))))))......................(((((((.........)))))))..............................................
bpRNA_RFAM_7084
UCGUUGUUCACGGUGUGUGGGGUGAGAACUCUGUGCAUCGCAUGUGAAAGGUAAUUCAAUCAUGUCUCUCGAAAAAACAAGCAAAGCUGCCAUCGUUGCAGAUAACGCACGUGGCGCA
......((((((........)))))).....................(((((((...........)))))))..............................................
bpRNA_RFAM_7113
UAUAGGCGUUAUACUUUACAGCAACAGUACGCCGCUAACGCAAUUGCUACCUCUGGCAUAACAAGUAUAUCGGGUAAGGGUUUCUGUUCCGCACACGCAGGCGCAGAGUAUCGUUAAGAUGUCCAUAUUGUUGUUUUAAUCCCGCUAGUGAUGCGCUACGGGUAUUUAAUAUUGUUAACCCCUGAUAAUCGCUCCGGUUAUUUCCGGGAUAAAUGUACUACC
.....(((((..........................)))))...(((((....)))))..........................(((((((......................................................(((((((..................)))))))......((((((((...))))))))..)))))))...........
bpRNA_RFAM_7123
CCCCAUUGCAGAGCUAAAACCGCCGUCGGGUGAGUUCCGGAGAUAAGCGCCGGGUGGGGACAACUUC
.(((........(((.................))).((((.(.....).))))..))).........
bpRNA_RFAM_7142
CUUACUGAGAGCACAAAGUUUCCCGUGCCAACAGGGAGUGUUAUAACGGUUUAUUAGUCUGGAGACGGCAGACUAUCCUCUUCCCGGUCCCCUAUGCCGGUUUUUUUUUAUGUC
...((((..(((((......((((((....)).)))))))))....))))....(((((((.......))))))).......((((((.......)))))).............
bpRNA_RFAM_7148
ACGAUCGAUACCUAUUUUACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCCUGUUAGCAACGUGCGCAGAUACACACAGACAUGAGAUUCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUUUUUUAUUCACC
.................(((((((((.......))))))))).................(((.((.......)).)))....................(((.................................(((((....))))).......))).......(((((((((((((..))))))))))))).............
bpRNA_RFAM_7155
AAAACCACCCCAGCGACGUUCAUAGAAUGGCGCAAUAUGUUCGAUAUUAAAAUGACCUGGCUUAUUAGUCCGAAUUCAGACAAAUAUAAACAAAUCCUGCUCAAUAUUAAAAUAUACUAACCGGUAAAAGAUAUUACUUAAAAAUGUAAAUUCACUUUUCUUUAAAAAACAAAAAACCGCCAAAAUCAGGCGGUUAUUUGUUGCCGGUUUGGU
.......(((((((((((...((((.......)))).)).))))))))).......((((..((((.(((.(....).))).)))).................................((((((....((..((((........))))..))..............((((((.(((((((.......))))))).)))))))))))))))).
bpRNA_RFAM_7163
GUGGGCUUUUCCGCCACCUUAAGCAAGUGGGCAUCGGUUUUGGGGAAAGGAUUCCAAUAGCCGUAAAUGCAAGCACGACCCGGUGCUUGUCUUUCACGGCAAUAUCGCCGGUGGUGUUGCCGUGAAGCGGUUUGAGCAUGGACCGCACAAUGAAACGAUACUUUUGUGUUGUGCUCGUUGUAUCUGGUGUGAUGUUGUCGUCUGGAAAGGGAAGUUGGAAUCUCUCCGACAACGUUAUUUCAGUAACAAUCUAUCACCAGAGCAAGUAAGCCAGAUGGCCGCUUGGCGGCCAUCUUU
......((((((.((((.........))))((....))....))))))...........(((.......(((((((......)))))))...(((((((((.(((((....))))).)))))))))(((((((......)))))))(((((((..((((((....)))))))).)))))......)))((.(((((..............((((.....))))..................(((........))).....))))))).......((((((((....)))))).))..
bpRNA_RFAM_7171
UAGAAAAUAUACAUAAUCCGCACAUAUAUCGGCACAUUGUUCAGGGUGUCUUAAAAACUCAGUUUUUAGGAUUGGAUAAUGGGAUAUAUGGAGGCUUAAC
......................((((((((....(((((((((....(((((...............)))))))))))))).))))))))..........
bpRNA_RFAM_7172
AAUAAAUCCACUAAAAUCCGCACAUAUACCGUCACAAAGGUCAGGGUGCUCUGUUAAGUCAGGGUUGAUCGAUGGGGUAUAUGGAGGCCUAAC
......................((((((((....(((((((((....(((((........)))))))))))))).))))))))..........
bpRNA_RFAM_7174
GUUGCCUGAGUACAAAAACACACAUACACCGUCACAGAGAUUGGGGUGCUCAUAGCCAGAGUCAAUCUUUGGGGUGUGUGGAGGCGUAAC
......................((((((((....(((((((((....(((((.....)))))))))))))).))))))))..........
bpRNA_RFAM_7194
AACAAACUAUUUCUUAAAUCACACACGUACCGACACAUGAUCCGGGGUGCUCACUUACUUAGAUAUAAGAAGCUGAGUCGGACGCAUGGGGUAUGUGGAGGCCUAAC
.......................((((((((....(((((((((....(((((....................))))))))).))))).))))))))..........
bpRNA_RFAM_7198
CUUUAUUUUUAUUGUCCACACACGUGUCGACACAUGCGGCUGGGUGCCUGGGAAUUCGCUCCGGGUUGUCGCGUGGGAUGCGUGGAGGUCCAAC
....................((((((((....(((((((((....(((((...........)))))))))))))).))))))))..........
bpRNA_RFAM_7208
UUGAAACCAUAAAAAACACACAUGCGUCGACACAUGUUUCGGGUGCCGCUCAAAUGCGGUUGGAGCAUGGGAUGCAUGGAGGUUAAAC
....................((((((((....(((((((((...(((((......)))))))))))))).))))))))..........
bpRNA_RFAM_7227
CUCGCGGAACCUUAAUCCACACACGCAUCGACACGGUCUGUCGGGUGCCCGCCAGGAGGCUUCGGUCUCGUGCUCGGGUUUCAGAUCGGGAUGCGUGGAGGCUCAAC
.....................((((((((....(((((((((....(((((.......................)))))))))))))).))))))))..........
bpRNA_RFAM_7229
UGUUAUUUGCAUAAACAACACACACGUAUCGGCACAUGUGCCGGGGUGCCGUCGGACGCGAAUGCGUGCGGUGGUCGGCGUCAUGGGAUACGUGGAGGCAUAAC
......................((((((((....(((((((((....(((((..................))))))))).))))).))))))))..........
bpRNA_RFAM_7233
AAAGGUUUAAUUUUAAUUCACACACAUAUCGACACUAACAAUCGGGGUGCCAAACGGUCGGUUGUUUAGGGAUAUGUGGAGGCUAAAC
.......................(((((((....(((((.((((....(((.....))))))..))))).))))))))..........
bpRNA_RFAM_7240
CUCAUUUGUGUAAAUAACACACACGGAUCGACACAUACACCGGGGUGCUCUCAUGUGGUUCGCUCUUCUAUGAAUAGCUUCGCAGUCAAAGAGUCGGUGUUAUGGGAUCUGUGGAGGCAUAAC
.....................((((((((....(((((((((....(((((......................................))))))))).))))).))))))))..........
bpRNA_RFAM_7244
AGUUGCUCAUUCACCUCUUUAUGAUAGUCCCGCUGUUAAGCGGAAUAUGCGCUUCAUAAGCCACCGAAUGAUGCCUAAGACUGGUGCCUAUCGUCCACCUAAACCGAUAUUGUGUGAAUGCACAUUAUCAAACAUCGGACGACACGUUGAGUGAGGCACCGCCUA
....((((((((......((((((.(((......................)))))))))......)))))).))........(((((((..(((((........((((((..............))))))......))))).(((.....)))))))))).....
bpRNA_RFAM_7326
GAAAAGAGUUUGGGCACAAGGUGAUGACCUAUGAAUUGACAGCCAGUUACUUCUAACACCUGCCUGUCAGUUCUGUAGGCCACUGCUGCGUUUGUCCUCCUGAGCAC
...(((.......(.(((......(((((((.((((((((((((((.............))))))))))))))..)))))))......))).)..))).........
bpRNA_RFAM_738
AACUUUCAGCGACGGAUGUCUCGGCUCGAACAACGAUGAAGGGCGCAGCGAAAUGUGAUAAGCAAUGUGAAUUGCAGAAUUCCGUGAACCAAUAGGGACUUGAACGUAUACUGCGCUUUCGGGAUAUCCCUGAAGGCAUGCCUGCUUCAGUGUCU
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
bpRNA_RFAM_7392
GUGGCCAAUGAUGAUGAAUAUAUACCCAAAUUUUCGAAUUUCUUUUAAGAAAUUCUGAGAUAACAACAUGCACUACCAUCUGAGGCAC
.(((.(.............................................................................)).))
bpRNA_RFAM_7398
GAGACUGUGAUGAUAAUGCUUACCAAAGCACGUUCGAGUUUGGCGACCAUGAGAUGAAAAGCUCCAUGCACCUCCAUCUGAGCUCUC
.(((.............................................................................)).)..
bpRNA_RFAM_742
GACGCGACCCGGUGGAUGCCUUGGCUCGGGGGACGAUGAAGGACGUGGCUGACGACGAUACUCGAUGUGGUCCAAGCACGUGACAUCGAUCUUCGAAUGGAUCAUCGGGGUGGUG
.......................................((((((((......)))).......(((........))......).......))))....................
bpRNA_RFAM_7447
UUUGUCUGUGAUGUUUUCCCACUUGUAUUUGAGUUUCAUUGACCUUGAAAACAUUGUACAUGCACUACCAUCUGAGACAAG
.(((((.....................................................................))))).
bpRNA_RFAM_7470
UGCAAUCUGUGAUGCAAAUAAUCCCAUUUGCUGAAUCACUGUGAUUAUUGCAAUCAAAAUCACCAUCUUUCGGCUGAGAUUGCA
.((((((......................................................................)))))).
bpRNA_RFAM_7485
GAUUGGCUGGGAUGAUGAAUUGUAACAGCUUGAUACGCCAGUUCUGCUUCAGAUAAUUCUUGAUCGAAAAAGCUGUAUUCUUAUCCGAGCCUUUC
.((((((.................................................................................)))))).
bpRNA_RFAM_7495
UUAAAUACAUGAUGAUCUACCCCAACUUGAACUCUCUCACUGAUAACUUGAUGAUAAUGGGAAGGAAAAAAAAAAGAGUACUUAA
.((((((.......................................................................)))))).
bpRNA_RFAM_7496
CACAAUAUAUGACGGUCCAUCCCAACUUGACCUCUCUCACCAGUUACUUGAUGAUAAUCGGAUCUGAUAUUCUG
.((((((............................................................)))))).
bpRNA_RFAM_7501
UUGGAUAUAUAAUAAUCUCACUCCAACUUAAACUCUCUCACUGAUUAUUUGAUAAUAAUAACAGGUCAGAUAUUUUG
.((((((...............................................................)))))).
bpRNA_RFAM_752
AAGCAUAAACGGUGAAUACCUCGACUCCUAAAUCGAUGAAGACCGUAGCAAACUGCGAUAAUUCACUUGAAUUGCAGCCUACUGGGAUAGUUGAAAUGUUGAACGCACAUGAUGACAUCGGUCCUUUCGGAUUAGGUGUUAUACUUGGGUGAGAGUGG
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((.........)))))))))..................
bpRNA_RFAM_7525
CUGCAGAUAUUCUCACUGUUUUGAUUUUGUAAUAGUCAGGACAGGCUAACCAUUCACUUUAUUAAGACCAUGCAUAUAUCCCCAGAACUAGUUCUUUCCCGAGGUCUAGUUUUAUAAAUGUUGCUGAUAAAC
..(((..........(((((((((((.......)))))))))))..........))).........((((.((........((((((((((........))))))))))..........)))))).......