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The dataset generation failed
Error code:   DatasetGenerationError
Exception:    TypeError
Message:      int() argument must be a string, a bytes-like object or a real number, not 'NoneType'
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1531, in _prepare_split_single
                  for key, record in generator:
                                     ^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 613, in wrapped
                  for item in generator(*args, **kwargs):
                              ~~~~~~~~~^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/webdataset/webdataset.py", line 127, in _generate_examples
                  for example_idx, example in enumerate(self._get_pipeline_from_tar(tar_path, tar_iterator)):
                                              ~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/webdataset/webdataset.py", line 32, in _get_pipeline_from_tar
                  for filename, f in tar_iterator:
                                     ^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/utils/track.py", line 49, in __iter__
                  for x in self.generator(*self.args):
                           ~~~~~~~~~~~~~~^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 1405, in _iter_from_urlpath
                  with xopen(urlpath, "rb", download_config=download_config, block_size=0) as f:
                       ~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 982, in xopen
                  file_obj = fs.open(paths[0], mode)
                File "<string>", line 3, in open
                File "/usr/local/lib/python3.14/unittest/mock.py", line 1176, in __call__
                  return self._mock_call(*args, **kwargs)
                         ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/unittest/mock.py", line 1180, in _mock_call
                  return self._execute_mock_call(*args, **kwargs)
                         ~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/unittest/mock.py", line 1247, in _execute_mock_call
                  result = effect(*args, **kwargs)
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 786, in wrapped
                  tracker.files[urlpath] = {"read": 0, "size": int(f.size)}
                                                               ~~~^^^^^^^^
              TypeError: int() argument must be a string, a bytes-like object or a real number, not 'NoneType'
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1393, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1571, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset

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pt
unknown
__key__
string
__url__
string
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processed_graphs/sample_000004
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
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processed_graphs/sample_000005
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
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processed_graphs/sample_000006
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
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processed_graphs/sample_000007
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
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processed_graphs/sample_000008
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
"UEsDBAAACAgAAAAAAAAAAAAAAAAAAAAAAAAWAAwAc2FtcGxlXzAwMDAwOS9kYXRhLnBrbEZCCABaWlpaWlpaWoACY3RvcmNoX2d(...TRUNCATED)
processed_graphs/sample_000009
"hf://datasets/muradulislam/PhyGAT-15k-Geometric-Nanofluids@01743559a9cc84329ce8dcdc4c797da88bb5ce5f(...TRUNCATED)
End of preview.

PhyGAT-15k: Zero-Shot Geometric Nanofluid Dynamics Dataset

Overview

This dataset contains 15,000 highly relational PyTorch Geometric (.pt) graphs representing steady-state computational fluid dynamics (CFD) and convective heat transfer of 5-component hybrid nanofluids. It is specifically designed to train and evaluate Geometric Foundation Models for physics-informed machine learning, enabling zero-shot generalization across varying topologies.

The dataset overcomes the limitations of fixed-mesh surrogates by introducing procedurally generated geometries with dynamic boundaries, explicit Signed Distance Fields (SDFs), surface normals, and dimensionless thermodynamic parameterizations.

Physics & Thermodynamics

The dataset models a continuous fluid domain subject to the steady-state Navier-Stokes and Energy equations, solved via the FEniCS finite element framework.

  • Nanoparticles: $Al_{2}O_{3}$, Cu, $TiO_{2}$, $SiO_{2}$, Multi-Walled Carbon Nanotubes (MWCNT).
  • Dilute Limit: Total volumetric concentration $\phi \le 4%$.
  • Properties: Density and specific heat are modeled via the Principle of Mixtures. Dynamic viscosity utilizes the Brinkman model. Thermal conductivity utilizes the Hamilton-Crosser model (accounting for anisotropic cylindrical MWCNTs).
  • Convective Regime: Reynolds Number uniformly sampled between $Re = 40.0$ and $Re = 120.0$.

Procedural Geometry

Each of the 15,000 graphs features a unique geometry:

  • Macrochannels: Straight, Converging (Funnel), and Step-Expansion.
  • Internal Obstacles: Randomized counts (1 to 3) and shapes (Circles, Squares, Triangles) acting as heat sources $(T=1.0)$.
  • Meshing: Unstructured triangular meshes generated via Gmsh, with typical resolutions ranging from 3,000 to 6,000 nodes per graph.

Graph Feature Structure

To enable true geometric generalization, standard absolute coordinates have been replaced with a rich, 32-dimensional relational node representation.

Node Features data.x (Shape: [N, 32])

Index Feature Description
0-1 Spatial Absolute Cartesian coordinates $(x, y)$.
2-5 Boundary Flags Binary flags for [Inlet, Outlet, Wall, Obstacle].
6-8 Dirichlet BCs Explicit boundary conditions $[u_x, u_y, T]$.
9-11 Wall Vector SDF Distance to nearest adiabatic wall, and unit direction vector $[dist, v_x, v_y]$.
12-14 Obs Vector SDF Distance to nearest heated obstacle, and unit direction vector $[dist, v_x, v_y]$.
15-16 Surface Normals Inward-pointing normal vectors for boundary nodes $[n_x, n_y]$.
17 Nodal Area Finite element nodal integration weight (for continuous loss formulations).
18-22 Nanofluid Composition Volume fractions $[\phi_{Al2O3}, \phi_{Cu}, \phi_{TiO2}, \phi_{SiO2}, \phi_{MWCNT}]$.
23-27 Thermodynamic Effective mixture properties $[Re, \rho_{eff}, \mu_{eff}, k_{eff}, (\rho C_p)_{eff}]$.
28-31 Dimensionless Kinematic viscosity, Thermal diffusivity, Prandtl, Péclet $[\nu, \alpha, Pr, Pe]$.

Edge Attributes data.edge_attr (Shape: [E, 9])

Index Feature Description
0-1 Displacement Relative vector between source and destination node $[\Delta x, \Delta y]$.
2 Distance Absolute edge length $L_2$ norm.
3-4 Unit Vector Normalized displacement $[\Delta x / dist, \Delta y / dist]$.
5-8 Boundary Edges Binary flags indicating if the edge lies entirely on a [Wall, Obstacle, Inlet, Outlet].

Target Features data.y (Shape: [N, 10])

All targets are extracted directly from the converged FEniCS Newton solver.

Index Feature Description
0-1 Velocity $u_x, u_y$ [m/s].
2 Pressure Static pressure $p$ [Pa].
3 Temperature Non-dimensional temperature $T$.
4 Velocity Magnitude $|u|$.
5 Vorticity $\nabla \times u$.
6-7 Temperature Gradient $\nabla T_x, \nabla T_y$.
8-9 Pressure Gradient $\nabla p_x, \nabla p_y$.

Usage

These graphs are natively compatible with PyTorch Geometric (PyG). Due to the explicit inclusion of spatial gradients in the target matrix (data.y), models can be trained using pure supervised Mean Squared Error (MSE), or constrained via Physics-Informed Neural Network (PINN) loss functions without requiring auto-differentiation through the network.

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