BreastDCEDL_ISPY / README.md
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BreastDCEDL_ISPY Dataset

BreastDCEDL_ISPY is a curated dataset of pre-treatment 3D dynamic contrast-enhanced MRI (DCE-MRI) scans from 1,154 breast cancer patients, combining data from two major clinical trials:

  • I-SPY1: 172 patients
  • I-SPY2: 982 patients

Each patient includes 3 selected DCE-MRI scans:

  • Pre-contrast
  • Early post-contrast
  • Late post-contrast

This minimal version was derived from the full TCIA archives and optimized for deep learning applications in breast cancer imaging and outcome prediction.

📄 Related Paper:
BreastDCEDL: Curating a Comprehensive DCE-MRI Dataset and Developing a Transformer Implementation

📦 Zenodo Archive:
Download BreastDCEDL_ISPY Dataset on Zenodo

Contents

  • 3D DCE-MRI scans in NIfTI format (3 time points per patient)
  • Tumor segmentation masks
  • Clinical metadata including:
    • Pathological complete response (pCR)
    • Hormone receptor (HR) status
    • HER2 status
    • Age and race

Benchmark Tasks Supported

  • Prediction of pathological complete response (pCR)
  • Hormone receptor (HR) status classification
  • HER2 status classification
  • Tumor segmentation

Source Citations


License: CC-BY