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0704.0062
Tom\'a\v{s} Vina\v{r}
Rastislav \v{S}r\'amek, Bro\v{n}a Brejov\'a, Tom\'a\v{s} Vina\v{r}
On-line Viterbi Algorithm and Its Relationship to Random Walks
null
Algorithms in Bioinformatics: 7th International Workshop (WABI), 4645 volume of Lecture Notes in Computer Science, pp. 240-251, Philadelphia, PA, USA, September 2007. Springer
10.1007/978-3-540-74126-8_23
null
cs.DS
null
In this paper, we introduce the on-line Viterbi algorithm for decoding hidden Markov models (HMMs) in much smaller than linear space. Our analysis on two-state HMMs suggests that the expected maximum memory used to decode sequence of length $n$ with $m$-state HMM can be as low as $\Theta(m\log n)$, without a signific...
[ { "version": "v1", "created": "Sat, 31 Mar 2007 23:52:33 GMT" } ]
2010-01-25T00:00:00
[ [ "Šrámek", "Rastislav", "" ], [ "Brejová", "Broňa", "" ], [ "Vinař", "Tomáš", "" ] ]
0704.0468
Jinsong Tan
Jinsong Tan
Inapproximability of Maximum Weighted Edge Biclique and Its Applications
null
LNCS 4978, TAMC 2008, pp 282-293
null
null
cs.CC cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Given a bipartite graph $G = (V_1,V_2,E)$ where edges take on {\it both} positive and negative weights from set $\mathcal{S}$, the {\it maximum weighted edge biclique} problem, or $\mathcal{S}$-MWEB for short, asks to find a bipartite subgraph whose sum of edge weights is maximized. This problem has various applicati...
[ { "version": "v1", "created": "Tue, 3 Apr 2007 21:39:11 GMT" }, { "version": "v2", "created": "Mon, 23 Mar 2009 02:50:29 GMT" } ]
2009-03-23T00:00:00
[ [ "Tan", "Jinsong", "" ] ]
0704.0788
Kerry Soileau
Kerry M. Soileau
Optimal Synthesis of Multiple Algorithms
null
null
null
null
cs.DS cs.PF
null
In this paper we give a definition of "algorithm," "finite algorithm," "equivalent algorithms," and what it means for a single algorithm to dominate a set of algorithms. We define a derived algorithm which may have a smaller mean execution time than any of its component algorithms. We give an explicit expression for ...
[ { "version": "v1", "created": "Thu, 5 Apr 2007 19:47:54 GMT" } ]
2007-05-23T00:00:00
[ [ "Soileau", "Kerry M.", "" ] ]
0704.0834
Anatoly Rodionov
Anatoly Rodionov, Sergey Volkov
P-adic arithmetic coding
29 pages
null
null
null
cs.DS
null
A new incremental algorithm for data compression is presented. For a sequence of input symbols algorithm incrementally constructs a p-adic integer number as an output. Decoding process starts with less significant part of a p-adic integer and incrementally reconstructs a sequence of input symbols. Algorithm is based ...
[ { "version": "v1", "created": "Fri, 6 Apr 2007 02:30:42 GMT" } ]
2007-05-23T00:00:00
[ [ "Rodionov", "Anatoly", "" ], [ "Volkov", "Sergey", "" ] ]
0704.1068
Leo Liberti
Giacomo Nannicini, Philippe Baptiste, Gilles Barbier, Daniel Krob, Leo Liberti
Fast paths in large-scale dynamic road networks
12 pages, 4 figures
null
null
null
cs.NI cs.DS
null
Efficiently computing fast paths in large scale dynamic road networks (where dynamic traffic information is known over a part of the network) is a practical problem faced by several traffic information service providers who wish to offer a realistic fast path computation to GPS terminal enabled vehicles. The heuristi...
[ { "version": "v1", "created": "Mon, 9 Apr 2007 07:04:19 GMT" }, { "version": "v2", "created": "Wed, 27 Jun 2007 18:17:35 GMT" } ]
2007-06-27T00:00:00
[ [ "Nannicini", "Giacomo", "" ], [ "Baptiste", "Philippe", "" ], [ "Barbier", "Gilles", "" ], [ "Krob", "Daniel", "" ], [ "Liberti", "Leo", "" ] ]
0704.1748
Frank Schweitzer
Markus M. Geipel
Self-Organization applied to Dynamic Network Layout
Text revision and figures improved in v.2. See http://www.sg.ethz.ch for more info and examples
International Journal of Modern Physics C vol. 18, no. 10 (2007), pp. 1537-1549
10.1142/S0129183107011558
null
physics.comp-ph cs.DS nlin.AO
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
As networks and their structure have become a major field of research, a strong demand for network visualization has emerged. We address this challenge by formalizing the well established spring layout in terms of dynamic equations. We thus open up the design space for new algorithms. Drawing from the knowledge of sy...
[ { "version": "v1", "created": "Fri, 13 Apr 2007 16:45:28 GMT" }, { "version": "v2", "created": "Thu, 19 Apr 2007 13:21:55 GMT" }, { "version": "v3", "created": "Sun, 7 Sep 2008 12:46:19 GMT" }, { "version": "v4", "created": "Mon, 24 Nov 2008 18:35:59 GMT" }, { "ve...
2009-11-13T00:00:00
[ [ "Geipel", "Markus M.", "" ] ]
0704.2092
Jinsong Tan
Jinsong Tan
A Note on the Inapproximability of Correlation Clustering
null
Information Processing Letters, 108: 331-335, 2008
null
null
cs.LG cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
We consider inapproximability of the correlation clustering problem defined as follows: Given a graph $G = (V,E)$ where each edge is labeled either "+" (similar) or "-" (dissimilar), correlation clustering seeks to partition the vertices into clusters so that the number of pairs correctly (resp. incorrectly) classifi...
[ { "version": "v1", "created": "Tue, 17 Apr 2007 03:52:41 GMT" }, { "version": "v2", "created": "Mon, 23 Mar 2009 03:22:02 GMT" } ]
2009-03-23T00:00:00
[ [ "Tan", "Jinsong", "" ] ]
0704.2919
David Eppstein
David Eppstein, Jean-Claude Falmagne, and Hasan Uzun
On Verifying and Engineering the Well-gradedness of a Union-closed Family
15 pages
J. Mathematical Psychology 53(1):34-39, 2009
10.1016/j.jmp.2008.09.002
null
math.CO cs.DM cs.DS
null
Current techniques for generating a knowledge space, such as QUERY, guarantees that the resulting structure is closed under union, but not that it satisfies wellgradedness, which is one of the defining conditions for a learning space. We give necessary and sufficient conditions on the base of a union-closed set famil...
[ { "version": "v1", "created": "Mon, 23 Apr 2007 04:37:08 GMT" }, { "version": "v2", "created": "Fri, 16 Nov 2007 06:56:35 GMT" }, { "version": "v3", "created": "Mon, 14 Apr 2008 00:23:39 GMT" } ]
2009-08-28T00:00:00
[ [ "Eppstein", "David", "" ], [ "Falmagne", "Jean-Claude", "" ], [ "Uzun", "Hasan", "" ] ]
0704.3313
David Eppstein
David Eppstein and Michael T. Goodrich
Straggler Identification in Round-Trip Data Streams via Newton's Identities and Invertible Bloom Filters
Fuller version of paper appearing in 10th Worksh. Algorithms and Data Structures, Halifax, Nova Scotia, 2007
null
null
null
cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
We introduce the straggler identification problem, in which an algorithm must determine the identities of the remaining members of a set after it has had a large number of insertion and deletion operations performed on it, and now has relatively few remaining members. The goal is to do this in o(n) space, where n is ...
[ { "version": "v1", "created": "Wed, 25 Apr 2007 06:59:43 GMT" }, { "version": "v2", "created": "Fri, 18 May 2007 21:56:45 GMT" }, { "version": "v3", "created": "Thu, 10 Sep 2009 04:13:31 GMT" } ]
2009-09-10T00:00:00
[ [ "Eppstein", "David", "" ], [ "Goodrich", "Michael T.", "" ] ]
0704.3496
Frank Gurski
Frank Gurski
Polynomial algorithms for protein similarity search for restricted mRNA structures
10 Pages
null
null
null
cs.DS cs.CC
null
In this paper we consider the problem of computing an mRNA sequence of maximal similarity for a given mRNA of secondary structure constraints, introduced by Backofen et al. in [BNS02] denoted as the MRSO problem. The problem is known to be NP-complete for planar associated implied structure graphs of vertex degree at...
[ { "version": "v1", "created": "Thu, 26 Apr 2007 08:30:14 GMT" } ]
2007-05-23T00:00:00
[ [ "Gurski", "Frank", "" ] ]
0704.3773
Sam Tannous
Sam Tannous
Avoiding Rotated Bitboards with Direct Lookup
7 pages, 1 figure, 4 listings; replaced test positions, fixed typos
ICGA Journal, Vol. 30, No. 2, pp. 85-91. (June 2007).
null
null
cs.DS
null
This paper describes an approach for obtaining direct access to the attacked squares of sliding pieces without resorting to rotated bitboards. The technique involves creating four hash tables using the built in hash arrays from an interpreted, high level language. The rank, file, and diagonal occupancy are first isol...
[ { "version": "v1", "created": "Sat, 28 Apr 2007 03:11:59 GMT" }, { "version": "v2", "created": "Mon, 23 Jul 2007 19:23:39 GMT" } ]
2007-10-09T00:00:00
[ [ "Tannous", "Sam", "" ] ]
0704.3835
K. Y. Michael Wong
K. Y. Michael Wong and David Saad
Minimizing Unsatisfaction in Colourful Neighbourhoods
28 pages, 12 figures, substantially revised with additional explanation
J. Phys. A: Math. Theor. 41, 324023 (2008).
10.1088/1751-8113/41/32/324023
null
cs.DS cond-mat.dis-nn cs.CC
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Colouring sparse graphs under various restrictions is a theoretical problem of significant practical relevance. Here we consider the problem of maximizing the number of different colours available at the nodes and their neighbourhoods, given a predetermined number of colours. In the analytical framework of a tree app...
[ { "version": "v1", "created": "Sun, 29 Apr 2007 10:03:00 GMT" }, { "version": "v2", "created": "Fri, 21 Dec 2007 04:18:58 GMT" }, { "version": "v3", "created": "Tue, 1 Jul 2008 17:43:32 GMT" } ]
2009-11-13T00:00:00
[ [ "Wong", "K. Y. Michael", "" ], [ "Saad", "David", "" ] ]
0704.3904
Fabien Mathieu
Anh-Tuan Gai (INRIA Rocquencourt), Dmitry Lebedev (FT R&D), Fabien Mathieu (FT R&D), Fabien De Montgolfier (LIAFA), Julien Reynier (LIENS), Laurent Viennot (INRIA Rocquencourt)
Acyclic Preference Systems in P2P Networks
null
null
null
null
cs.DS cs.GT
null
In this work we study preference systems natural for the Peer-to-Peer paradigm. Most of them fall in three categories: global, symmetric and complementary. All these systems share an acyclicity property. As a consequence, they admit a stable (or Pareto efficient) configuration, where no participant can collaborate wi...
[ { "version": "v1", "created": "Mon, 30 Apr 2007 09:26:39 GMT" }, { "version": "v2", "created": "Wed, 2 May 2007 13:07:31 GMT" } ]
2007-05-23T00:00:00
[ [ "Gai", "Anh-Tuan", "", "INRIA Rocquencourt" ], [ "Lebedev", "Dmitry", "", "FT R&D" ], [ "Mathieu", "Fabien", "", "FT R&D" ], [ "De Montgolfier", "Fabien", "", "LIAFA" ], [ "Reynier", "Julien", "", "LIENS" ], [ ...
0705.0204
Tshilidzi Marwala
Lukasz A. Machowski, and Tshilidzi Marwala
Using Images to create a Hierarchical Grid Spatial Index
In Proceedings of the IEEE International Conference on Systems, Man and Cybernetics, Taiwan, 2006, pp. 1974-1979
null
10.1109/ICSMC.2006.385020
null
cs.DS
null
This paper presents a hybrid approach to spatial indexing of two dimensional data. It sheds new light on the age old problem by thinking of the traditional algorithms as working with images. Inspiration is drawn from an analogous situation that is found in machine and human vision. Image processing techniques are use...
[ { "version": "v1", "created": "Wed, 2 May 2007 05:37:32 GMT" } ]
2016-11-17T00:00:00
[ [ "Machowski", "Lukasz A.", "" ], [ "Marwala", "Tshilidzi", "" ] ]
0705.0253
Jian Li
Mordecai Golin and Li Jian
More Efficient Algorithms and Analyses for Unequal Letter Cost Prefix-Free Coding
29 pages;9 figures;
null
null
null
cs.IT cs.DS math.IT
null
There is a large literature devoted to the problem of finding an optimal (min-cost) prefix-free code with an unequal letter-cost encoding alphabet of size. While there is no known polynomial time algorithm for solving it optimally there are many good heuristics that all provide additive errors to optimal. The additiv...
[ { "version": "v1", "created": "Wed, 2 May 2007 11:23:52 GMT" }, { "version": "v2", "created": "Thu, 3 May 2007 09:00:23 GMT" } ]
2007-07-13T00:00:00
[ [ "Golin", "Mordecai", "" ], [ "Jian", "Li", "" ] ]
0705.0413
David Eppstein
David Eppstein, Marc van Kreveld, Elena Mumford, and Bettina Speckmann
Edges and Switches, Tunnels and Bridges
15 pages, 11 figures. To appear in 10th Worksh. Algorithms and Data Structures, Halifax, Nova Scotia, 2007. This version includes three pages of appendices that will not be included in the conference proceedings version
Computational Geometry Theory & Applications 42(8): 790-802, 2009
10.1016/j.comgeo.2008.05.005
null
cs.DS cs.CG
null
Edge casing is a well-known method to improve the readability of drawings of non-planar graphs. A cased drawing orders the edges of each edge crossing and interrupts the lower edge in an appropriate neighborhood of the crossing. Certain orders will lead to a more readable drawing than others. We formulate several opt...
[ { "version": "v1", "created": "Thu, 3 May 2007 06:33:04 GMT" } ]
2009-07-09T00:00:00
[ [ "Eppstein", "David", "" ], [ "van Kreveld", "Marc", "" ], [ "Mumford", "Elena", "" ], [ "Speckmann", "Bettina", "" ] ]
0705.0552
Rajeev Raman
Rajeev Raman, Venkatesh Raman, Srinivasa Rao Satti
Succinct Indexable Dictionaries with Applications to Encoding $k$-ary Trees, Prefix Sums and Multisets
Final version of SODA 2002 paper; supersedes Leicester Tech report 2002/16
ACM Transactions on Algorithms vol 3 (2007), Article 43, 25pp
10.1145/1290672.1290680
null
cs.DS cs.DM cs.IT math.IT
null
We consider the {\it indexable dictionary} problem, which consists of storing a set $S \subseteq \{0,...,m-1\}$ for some integer $m$, while supporting the operations of $\Rank(x)$, which returns the number of elements in $S$ that are less than $x$ if $x \in S$, and -1 otherwise; and $\Select(i)$ which returns the $i$...
[ { "version": "v1", "created": "Fri, 4 May 2007 07:47:05 GMT" } ]
2011-08-10T00:00:00
[ [ "Raman", "Rajeev", "" ], [ "Raman", "Venkatesh", "" ], [ "Satti", "Srinivasa Rao", "" ] ]
0705.0561
Jingchao Chen
Jing-Chao Chen
Iterative Rounding for the Closest String Problem
This paper has been published in abstract Booklet of CiE09
null
null
null
cs.DS cs.CC
http://creativecommons.org/licenses/by-nc-sa/3.0/
The closest string problem is an NP-hard problem, whose task is to find a string that minimizes maximum Hamming distance to a given set of strings. This can be reduced to an integer program (IP). However, to date, there exists no known polynomial-time algorithm for IP. In 2004, Meneses et al. introduced a branch-and-...
[ { "version": "v1", "created": "Fri, 4 May 2007 03:01:42 GMT" }, { "version": "v2", "created": "Wed, 11 May 2011 00:18:55 GMT" } ]
2011-05-12T00:00:00
[ [ "Chen", "Jing-Chao", "" ] ]
0705.0588
Edgar Graaf de
Edgar H. de Graaf, Joost N. Kok, Walter A. Kosters
Clustering Co-occurrence of Maximal Frequent Patterns in Streams
null
null
null
null
cs.AI cs.DS
null
One way of getting a better view of data is using frequent patterns. In this paper frequent patterns are subsets that occur a minimal number of times in a stream of itemsets. However, the discovery of frequent patterns in streams has always been problematic. Because streams are potentially endless it is in principle ...
[ { "version": "v1", "created": "Fri, 4 May 2007 10:36:53 GMT" } ]
2007-05-23T00:00:00
[ [ "de Graaf", "Edgar H.", "" ], [ "Kok", "Joost N.", "" ], [ "Kosters", "Walter A.", "" ] ]
0705.0593
Edgar Graaf de
Edgar H. de Graaf, Joost N. Kok, Walter A. Kosters
Clustering with Lattices in the Analysis of Graph Patterns
null
null
null
null
cs.AI cs.DS
null
Mining frequent subgraphs is an area of research where we have a given set of graphs (each graph can be seen as a transaction), and we search for (connected) subgraphs contained in many of these graphs. In this work we will discuss techniques used in our framework Lattice2SAR for mining and analysing frequent subgrap...
[ { "version": "v1", "created": "Fri, 4 May 2007 10:52:28 GMT" } ]
2007-05-23T00:00:00
[ [ "de Graaf", "Edgar H.", "" ], [ "Kok", "Joost N.", "" ], [ "Kosters", "Walter A.", "" ] ]
0705.0933
Max Neunh\"offer
Max Neunhoeffer, Cheryl E. Praeger
Computing Minimal Polynomials of Matrices
null
null
null
null
math.RA cs.DS
null
We present and analyse a Monte-Carlo algorithm to compute the minimal polynomial of an $n\times n$ matrix over a finite field that requires $O(n^3)$ field operations and O(n) random vectors, and is well suited for successful practical implementation. The algorithm, and its complexity analysis, use standard algorithms...
[ { "version": "v1", "created": "Mon, 7 May 2007 15:48:12 GMT" }, { "version": "v2", "created": "Mon, 7 Apr 2008 12:18:34 GMT" } ]
2008-04-07T00:00:00
[ [ "Neunhoeffer", "Max", "" ], [ "Praeger", "Cheryl E.", "" ] ]
0705.1025
David Eppstein
David Eppstein
Recognizing Partial Cubes in Quadratic Time
25 pages, five figures. This version significantly expands previous versions, including a new report on an implementation of the algorithm and experiments with it
Journal of Graph Algorithms and Applications 15(2) 269-293, 2011
null
null
cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
We show how to test whether a graph with n vertices and m edges is a partial cube, and if so how to find a distance-preserving embedding of the graph into a hypercube, in the near-optimal time bound O(n^2), improving previous O(nm)-time solutions.
[ { "version": "v1", "created": "Tue, 8 May 2007 17:59:08 GMT" }, { "version": "v2", "created": "Tue, 19 Jul 2011 22:39:16 GMT" } ]
2011-07-21T00:00:00
[ [ "Eppstein", "David", "" ] ]
0705.1033
Kebin Wang
Michael A. Bender, Bradley C. Kuszmaul, Shang-Hua Teng, Kebin Wang
Optimal Cache-Oblivious Mesh Layouts
null
null
null
null
cs.DS cs.CE cs.MS cs.NA
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
A mesh is a graph that divides physical space into regularly-shaped regions. Meshes computations form the basis of many applications, e.g. finite-element methods, image rendering, and collision detection. In one important mesh primitive, called a mesh update, each mesh vertex stores a value and repeatedly updates thi...
[ { "version": "v1", "created": "Tue, 8 May 2007 05:59:55 GMT" }, { "version": "v2", "created": "Mon, 5 Oct 2009 18:45:25 GMT" } ]
2009-10-05T00:00:00
[ [ "Bender", "Michael A.", "" ], [ "Kuszmaul", "Bradley C.", "" ], [ "Teng", "Shang-Hua", "" ], [ "Wang", "Kebin", "" ] ]
0705.1364
Mustaq Ahmed
Mustaq Ahmed and Anna Lubiw
An Approximation Algorithm for Shortest Descending Paths
14 pages, 3 figures
null
null
null
cs.CG cs.DS
null
A path from s to t on a polyhedral terrain is descending if the height of a point p never increases while we move p along the path from s to t. No efficient algorithm is known to find a shortest descending path (SDP) from s to t in a polyhedral terrain. We give a simple approximation algorithm that solves the SDP pro...
[ { "version": "v1", "created": "Wed, 9 May 2007 22:02:28 GMT" } ]
2007-05-23T00:00:00
[ [ "Ahmed", "Mustaq", "" ], [ "Lubiw", "Anna", "" ] ]
0705.1521
Frank Gurski
Frank Gurski
A note on module-composed graphs
10 pages
null
null
null
cs.DS
null
In this paper we consider module-composed graphs, i.e. graphs which can be defined by a sequence of one-vertex insertions v_1,...,v_n, such that the neighbourhood of vertex v_i, 2<= i<= n, forms a module (a homogeneous set) of the graph defined by vertices v_1,..., v_{i-1}. We show that module-composed graphs are H...
[ { "version": "v1", "created": "Thu, 10 May 2007 18:08:22 GMT" }, { "version": "v2", "created": "Sun, 22 Jul 2007 16:30:53 GMT" } ]
2007-07-23T00:00:00
[ [ "Gurski", "Frank", "" ] ]
0705.1750
Peng Cui
Peng Cui
A Tighter Analysis of Setcover Greedy Algorithm for Test Set
12 pages, 3 figures, Revised version
null
null
null
cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Setcover greedy algorithm is a natural approximation algorithm for test set problem. This paper gives a precise and tighter analysis of performance guarantee of this algorithm. The author improves the performance guarantee $2\ln n$ which derives from set cover problem to $1.1354\ln n$ by applying the potential functi...
[ { "version": "v1", "created": "Sat, 12 May 2007 04:18:36 GMT" }, { "version": "v2", "created": "Thu, 17 May 2007 09:32:21 GMT" }, { "version": "v3", "created": "Sun, 29 Mar 2009 02:58:29 GMT" }, { "version": "v4", "created": "Sat, 4 Apr 2009 02:46:12 GMT" }, { "ve...
2011-03-08T00:00:00
[ [ "Cui", "Peng", "" ] ]
0705.1876
Grzegorz Malewicz
Grzegorz Malewicz
Scheduling Dags under Uncertainty
null
null
null
null
cs.DS cs.DM
null
This paper introduces a parallel scheduling problem where a directed acyclic graph modeling $t$ tasks and their dependencies needs to be executed on $n$ unreliable workers. Worker $i$ executes task $j$ correctly with probability $p_{i,j}$. The goal is to find a regimen $\Sigma$, that dictates how workers get assigned...
[ { "version": "v1", "created": "Mon, 14 May 2007 06:54:42 GMT" } ]
2007-05-23T00:00:00
[ [ "Malewicz", "Grzegorz", "" ] ]
0705.1970
Nikolaos Laoutaris
Nikolaos Laoutaris
A Closed-Form Method for LRU Replacement under Generalized Power-Law Demand
null
null
null
null
cs.DS
null
We consider the well known \emph{Least Recently Used} (LRU) replacement algorithm and analyze it under the independent reference model and generalized power-law demand. For this extensive family of demand distributions we derive a closed-form expression for the per object steady-state hit ratio. To the best of our kn...
[ { "version": "v1", "created": "Mon, 14 May 2007 16:04:48 GMT" } ]
2007-05-23T00:00:00
[ [ "Laoutaris", "Nikolaos", "" ] ]
0705.1986
Andrei Paun
Andrei Paun
On the Hopcroft's minimization algorithm
10 pages, 1 figure
null
null
null
cs.DS
null
We show that the absolute worst case time complexity for Hopcroft's minimization algorithm applied to unary languages is reached only for de Bruijn words. A previous paper by Berstel and Carton gave the example of de Bruijn words as a language that requires O(n log n) steps by carefully choosing the splitting sets an...
[ { "version": "v1", "created": "Mon, 14 May 2007 17:15:53 GMT" } ]
2007-05-23T00:00:00
[ [ "Paun", "Andrei", "" ] ]
0705.2125
Ching-Lueh Chang
Ching-Lueh Chang, Yuh-Dauh Lyuu
Parallelized approximation algorithms for minimum routing cost spanning trees
null
null
null
null
cs.DS cs.CC
null
We parallelize several previously proposed algorithms for the minimum routing cost spanning tree problem and some related problems.
[ { "version": "v1", "created": "Tue, 15 May 2007 17:48:42 GMT" }, { "version": "v2", "created": "Wed, 4 Jul 2007 20:10:22 GMT" } ]
2007-07-04T00:00:00
[ [ "Chang", "Ching-Lueh", "" ], [ "Lyuu", "Yuh-Dauh", "" ] ]
0705.2503
Peng Cui
Peng Cui
Improved Approximability Result for Test Set with Small Redundancy
7 pages
null
null
null
cs.DS cs.CC
null
Test set with redundancy is one of the focuses in recent bioinformatics research. Set cover greedy algorithm (SGA for short) is a commonly used algorithm for test set with redundancy. This paper proves that the approximation ratio of SGA can be $(2-\frac{1}{2r})\ln n+{3/2}\ln r+O(\ln\ln n)$ by using the potential fun...
[ { "version": "v1", "created": "Thu, 17 May 2007 09:53:20 GMT" }, { "version": "v2", "created": "Thu, 7 Jun 2007 09:11:18 GMT" }, { "version": "v3", "created": "Tue, 11 Sep 2007 09:21:21 GMT" }, { "version": "v4", "created": "Thu, 27 Sep 2007 14:58:21 GMT" } ]
2007-09-27T00:00:00
[ [ "Cui", "Peng", "" ] ]
0705.2876
Phillip Bradford
Phillip G. Bradford and Daniel A. Ray
An online algorithm for generating fractal hash chains applied to digital chains of custody
null
null
null
null
cs.CR cs.DS
null
This paper gives an online algorithm for generating Jakobsson's fractal hash chains. Our new algorithm compliments Jakobsson's fractal hash chain algorithm for preimage traversal since his algorithm assumes the entire hash chain is precomputed and a particular list of Ceiling(log n) hash elements or pebbles are saved...
[ { "version": "v1", "created": "Sun, 20 May 2007 17:14:38 GMT" } ]
2007-05-23T00:00:00
[ [ "Bradford", "Phillip G.", "" ], [ "Ray", "Daniel A.", "" ] ]
0705.4171
Eva Borbely
Eva Borbely
Grover search algorithm
null
null
null
null
cs.DS
null
A quantum algorithm is a set of instructions for a quantum computer, however, unlike algorithms in classical computer science their results cannot be guaranteed. A quantum system can undergo two types of operation, measurement and quantum state transformation, operations themselves must be unitary (reversible). Most ...
[ { "version": "v1", "created": "Tue, 29 May 2007 09:42:46 GMT" } ]
2007-05-30T00:00:00
[ [ "Borbely", "Eva", "" ] ]
0705.4320
William Hung
William N. N. Hung, Changjian Gao, Xiaoyu Song, Dan Hammerstrom
Defect-Tolerant CMOL Cell Assignment via Satisfiability
To appear in Nanoelectronic Devices for Defense and Security (NANO-DDS), Crystal City, Virginia, June 2007
null
null
null
cs.DM cs.DS
null
We present a CAD framework for CMOL, a hybrid CMOS/ molecular circuit architecture. Our framework first transforms any logically synthesized circuit based on AND/OR/NOT gates to a NOR gate circuit, and then maps the NOR gates to CMOL. We encode the CMOL cell assignment problem as boolean conditions. The boolean const...
[ { "version": "v1", "created": "Tue, 29 May 2007 23:46:38 GMT" } ]
2007-05-31T00:00:00
[ [ "Hung", "William N. N.", "" ], [ "Gao", "Changjian", "" ], [ "Song", "Xiaoyu", "" ], [ "Hammerstrom", "Dan", "" ] ]
0705.4606
Marco Pellegrini
Filippo Geraci and Marco Pellegrini
Dynamic User-Defined Similarity Searching in Semi-Structured Text Retrieval
Submitted to Spire 2007
null
null
null
cs.IR cs.DS
null
Modern text retrieval systems often provide a similarity search utility, that allows the user to find efficiently a fixed number k of documents in the data set that are most similar to a given query (here a query is either a simple sequence of keywords or the identifier of a full document found in previous searches t...
[ { "version": "v1", "created": "Thu, 31 May 2007 13:46:39 GMT" } ]
2007-06-01T00:00:00
[ [ "Geraci", "Filippo", "" ], [ "Pellegrini", "Marco", "" ] ]
0705.4618
Roberto Bagnara
Roberto Bagnara, Patricia M. Hill, Enea Zaffanella
An Improved Tight Closure Algorithm for Integer Octagonal Constraints
15 pages, 2 figures
null
null
null
cs.DS cs.CG cs.LO
null
Integer octagonal constraints (a.k.a. ``Unit Two Variables Per Inequality'' or ``UTVPI integer constraints'') constitute an interesting class of constraints for the representation and solution of integer problems in the fields of constraint programming and formal analysis and verification of software and hardware sys...
[ { "version": "v1", "created": "Thu, 31 May 2007 14:32:46 GMT" }, { "version": "v2", "created": "Fri, 1 Jun 2007 08:17:11 GMT" } ]
2007-06-01T00:00:00
[ [ "Bagnara", "Roberto", "" ], [ "Hill", "Patricia M.", "" ], [ "Zaffanella", "Enea", "" ] ]
0705.4673
B\'ela Csaba
B\'ela Csaba (Anal. and Stoch. Res. Group, HAS), Andr\'as S. Pluh\'ar (Dept. of Comp. Sci., Univ. of Szeged)
A randomized algorithm for the on-line weighted bipartite matching problem
to be published
null
null
null
cs.DS cs.DM
null
We study the on-line minimum weighted bipartite matching problem in arbitrary metric spaces. Here, $n$ not necessary disjoint points of a metric space $M$ are given, and are to be matched on-line with $n$ points of $M$ revealed one by one. The cost of a matching is the sum of the distances of the matched points, and ...
[ { "version": "v1", "created": "Thu, 31 May 2007 18:35:21 GMT" }, { "version": "v2", "created": "Wed, 6 Jun 2007 20:24:22 GMT" } ]
2007-06-06T00:00:00
[ [ "Csaba", "Béla", "", "Anal. and Stoch. Res. Group, HAS" ], [ "Pluhár", "András S.", "", "Dept. of Comp. Sci., Univ. of Szeged" ] ]
0706.0046
Jingchao Chen
Jing-Chao Chen
Symmetry Partition Sort
null
null
null
null
cs.DS
null
In this paper, we propose a useful replacement for quicksort-style utility functions. The replacement is called Symmetry Partition Sort, which has essentially the same principle as Proportion Extend Sort. The maximal difference between them is that the new algorithm always places already partially sorted inputs (used...
[ { "version": "v1", "created": "Fri, 1 Jun 2007 01:47:06 GMT" } ]
2007-06-04T00:00:00
[ [ "Chen", "Jing-Chao", "" ] ]
0706.0489
Markus Jalsenius
Markus Jalsenius
Sampling Colourings of the Triangular Lattice
42 pages. Added appendix that describes implementation. Added ancillary files
null
null
null
math-ph cs.DM cs.DS math.MP
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
We show that the Glauber dynamics on proper 9-colourings of the triangular lattice is rapidly mixing, which allows for efficient sampling. Consequently, there is a fully polynomial randomised approximation scheme (FPRAS) for counting proper 9-colourings of the triangular lattice. Proper colourings correspond to confi...
[ { "version": "v1", "created": "Mon, 4 Jun 2007 17:49:25 GMT" }, { "version": "v2", "created": "Mon, 22 Mar 2010 17:49:43 GMT" }, { "version": "v3", "created": "Tue, 26 Oct 2010 02:09:02 GMT" } ]
2010-10-27T00:00:00
[ [ "Jalsenius", "Markus", "" ] ]
0706.1063
Matthias Brust R.
Matthias R. Brust, Steffen Rothkugel
Small Worlds: Strong Clustering in Wireless Networks
To appear in: 1st International Workshop on Localized Algorithms and Protocols for Wireless Sensor Networks (LOCALGOS 2007), 2007, IEEE Compuster Society Press
null
null
null
cs.NI cs.DC cs.DS
null
Small-worlds represent efficient communication networks that obey two distinguishing characteristics: a high clustering coefficient together with a small characteristic path length. This paper focuses on an interesting paradox, that removing links in a network can increase the overall clustering coefficient. Reckful ...
[ { "version": "v1", "created": "Thu, 7 Jun 2007 19:42:51 GMT" }, { "version": "v2", "created": "Mon, 11 Jun 2007 05:36:04 GMT" } ]
2007-06-11T00:00:00
[ [ "Brust", "Matthias R.", "" ], [ "Rothkugel", "Steffen", "" ] ]
0706.1084
Adam D. Smith
Sofya Raskhodnikova and Dana Ron and Ronitt Rubinfeld and Adam Smith
Sublinear Algorithms for Approximating String Compressibility
To appear in the proceedings of RANDOM 2007
null
null
null
cs.DS
null
We raise the question of approximating the compressibility of a string with respect to a fixed compression scheme, in sublinear time. We study this question in detail for two popular lossless compression schemes: run-length encoding (RLE) and Lempel-Ziv (LZ), and present sublinear algorithms for approximating compres...
[ { "version": "v1", "created": "Fri, 8 Jun 2007 02:58:28 GMT" } ]
2007-06-11T00:00:00
[ [ "Raskhodnikova", "Sofya", "" ], [ "Ron", "Dana", "" ], [ "Rubinfeld", "Ronitt", "" ], [ "Smith", "Adam", "" ] ]
0706.1318
John Tomlin
S. Sathiya Keerthi and John A. Tomlin
Constructing a maximum utility slate of on-line advertisements
null
null
null
null
cs.DM cs.DS
null
We present an algorithm for constructing an optimal slate of sponsored search advertisements which respects the ordering that is the outcome of a generalized second price auction, but which must also accommodate complicating factors such as overall budget constraints. The algorithm is easily fast enough to use on the...
[ { "version": "v1", "created": "Sat, 9 Jun 2007 16:18:45 GMT" } ]
2007-06-12T00:00:00
[ [ "Keerthi", "S. Sathiya", "" ], [ "Tomlin", "John A.", "" ] ]
0706.2155
Greg Sepesi
Greg Sepesi
Dualheap Selection Algorithm: Efficient, Inherently Parallel and Somewhat Mysterious
5 pages, 6 figures
null
null
null
cs.DS cs.CC cs.DC
null
An inherently parallel algorithm is proposed that efficiently performs selection: finding the K-th largest member of a set of N members. Selection is a common component of many more complex algorithms and therefore is a widely studied problem. Not much is new in the proposed dualheap selection algorithm: the heap d...
[ { "version": "v1", "created": "Thu, 14 Jun 2007 16:11:24 GMT" } ]
2007-06-15T00:00:00
[ [ "Sepesi", "Greg", "" ] ]
0706.2725
Guohun Zhu
Guohun Zhu
The Complexity of Determining Existence a Hamiltonian Cycle is $O(n^3)$
6 papers
null
null
null
cs.DS cs.CC cs.DM
null
The Hamiltonian cycle problem in digraph is mapped into a matching cover bipartite graph. Based on this mapping, it is proved that determining existence a Hamiltonian cycle in graph is $O(n^3)$.
[ { "version": "v1", "created": "Tue, 19 Jun 2007 07:57:51 GMT" } ]
2007-06-20T00:00:00
[ [ "Zhu", "Guohun", "" ] ]
0706.2839
Rajeev Raman
Naila Rahman and Rajeev Raman
Cache Analysis of Non-uniform Distribution Sorting Algorithms
The full version of our ESA 2000 paper (LNCS 1879) on this subject
null
null
null
cs.DS cs.PF
null
We analyse the average-case cache performance of distribution sorting algorithms in the case when keys are independently but not necessarily uniformly distributed. The analysis is for both `in-place' and `out-of-place' distribution sorting algorithms and is more accurate than the analysis presented in \cite{RRESA00}....
[ { "version": "v1", "created": "Tue, 19 Jun 2007 17:12:47 GMT" }, { "version": "v2", "created": "Mon, 13 Aug 2007 22:57:01 GMT" } ]
2007-08-14T00:00:00
[ [ "Rahman", "Naila", "" ], [ "Raman", "Rajeev", "" ] ]
0706.2893
Greg Sepesi
Greg Sepesi
Dualheap Sort Algorithm: An Inherently Parallel Generalization of Heapsort
4 pages, 4 figures
null
null
null
cs.DS cs.CC cs.DC
null
A generalization of the heapsort algorithm is proposed. At the expense of about 50% more comparison and move operations for typical cases, the dualheap sort algorithm offers several advantages over heapsort: improved cache performance, better performance if the input happens to be already sorted, and easier parallel ...
[ { "version": "v1", "created": "Wed, 20 Jun 2007 14:42:45 GMT" } ]
2007-06-21T00:00:00
[ [ "Sepesi", "Greg", "" ] ]
0706.3104
Cristina Toninelli
Marc Mezard, Cristina Toninelli
Group Testing with Random Pools: optimal two-stage algorithms
12 pages
null
null
null
cs.DS cond-mat.dis-nn cond-mat.stat-mech cs.IT math.IT
null
We study Probabilistic Group Testing of a set of N items each of which is defective with probability p. We focus on the double limit of small defect probability, p<<1, and large number of variables, N>>1, taking either p->0 after $N\to\infty$ or $p=1/N^{\beta}$ with $\beta\in(0,1/2)$. In both settings the optimal num...
[ { "version": "v1", "created": "Thu, 21 Jun 2007 08:57:44 GMT" } ]
2007-11-14T00:00:00
[ [ "Mezard", "Marc", "" ], [ "Toninelli", "Cristina", "" ] ]
0706.3565
Anatoly Plotnikov
Anatoly D. Plotnikov
Experimental Algorithm for the Maximum Independent Set Problem
From author's book "Discrete mathematics",3-th ed., Moscow,New knowledge,2007, 18 pages, 8 figures
Cybernetics and Systems Analysis: Volume 48, Issue 5 (2012), Page 673-680
null
null
cs.DS
null
We develop an experimental algorithm for the exact solving of the maximum independent set problem. The algorithm consecutively finds the maximal independent sets of vertices in an arbitrary undirected graph such that the next such set contains more elements than the preceding one. For this purpose, we use a technique...
[ { "version": "v1", "created": "Mon, 25 Jun 2007 06:45:49 GMT" }, { "version": "v2", "created": "Mon, 2 Jul 2007 02:16:12 GMT" } ]
2016-03-02T00:00:00
[ [ "Plotnikov", "Anatoly D.", "" ] ]
0706.4107
Mihai Patrascu
Gianni Franceschini, S. Muthukrishnan and Mihai Patrascu
Radix Sorting With No Extra Space
Full version of paper accepted to ESA 2007. (17 pages)
null
null
null
cs.DS
null
It is well known that n integers in the range [1,n^c] can be sorted in O(n) time in the RAM model using radix sorting. More generally, integers in any range [1,U] can be sorted in O(n sqrt{loglog n}) time. However, these algorithms use O(n) words of extra memory. Is this necessary? We present a simple, stable, inte...
[ { "version": "v1", "created": "Wed, 27 Jun 2007 22:04:40 GMT" } ]
2007-06-29T00:00:00
[ [ "Franceschini", "Gianni", "" ], [ "Muthukrishnan", "S.", "" ], [ "Patrascu", "Mihai", "" ] ]
0707.0282
Igor Razgon
Igor Razgon and Barry O'Sullivan
Directed Feedback Vertex Set is Fixed-Parameter Tractable
14 pages
null
null
null
cs.DS cs.CC
null
We resolve positively a long standing open question regarding the fixed-parameter tractability of the parameterized Directed Feedback Vertex Set problem. In particular, we propose an algorithm which solves this problem in $O(8^kk!*poly(n))$.
[ { "version": "v1", "created": "Mon, 2 Jul 2007 17:56:53 GMT" } ]
2007-07-03T00:00:00
[ [ "Razgon", "Igor", "" ], [ "O'Sullivan", "Barry", "" ] ]
0707.0421
Riccardo Dondi
Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi
The $k$-anonymity Problem is Hard
21 pages, A short version of this paper has been accepted in FCT 2009 - 17th International Symposium on Fundamentals of Computation Theory
null
null
null
cs.DB cs.CC cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
The problem of publishing personal data without giving up privacy is becoming increasingly important. An interesting formalization recently proposed is the k-anonymity. This approach requires that the rows in a table are clustered in sets of size at least k and that all the rows in a cluster become the same tuple, af...
[ { "version": "v1", "created": "Tue, 3 Jul 2007 14:17:49 GMT" }, { "version": "v2", "created": "Tue, 2 Jun 2009 16:40:37 GMT" } ]
2009-06-02T00:00:00
[ [ "Bonizzoni", "Paola", "" ], [ "Della Vedova", "Gianluca", "" ], [ "Dondi", "Riccardo", "" ] ]
0707.0546
Juli\'an Mestre
Juli\'an Mestre
Weighted Popular Matchings
14 pages, 3 figures. A preliminary version appeared in the Proceedings of the 33rd International Colloquium on Automata, Languages and Programming (ICALP)
null
null
null
cs.DS
null
We study the problem of assigning jobs to applicants. Each applicant has a weight and provides a preference list ranking a subset of the jobs. A matching M is popular if there is no other matching M' such that the weight of the applicants who prefer M' over M exceeds the weight of those who prefer M over M'. This pap...
[ { "version": "v1", "created": "Wed, 4 Jul 2007 06:55:43 GMT" } ]
2007-07-05T00:00:00
[ [ "Mestre", "Julián", "" ] ]
0707.0644
Ali Akhavi
Ali Akhavi (GREYC), C\'eline Moreira (GREYC)
Another view of the Gaussian algorithm
null
Proceedings of Latin'04 (04/2004) 474--487
null
null
cs.DS cs.DM
null
We introduce here a rewrite system in the group of unimodular matrices, \emph{i.e.}, matrices with integer entries and with determinant equal to $\pm 1$. We use this rewrite system to precisely characterize the mechanism of the Gaussian algorithm, that finds shortest vectors in a two--dimensional lattice given by any...
[ { "version": "v1", "created": "Wed, 4 Jul 2007 15:37:15 GMT" } ]
2007-07-05T00:00:00
[ [ "Akhavi", "Ali", "", "GREYC" ], [ "Moreira", "Céline", "", "GREYC" ] ]
0707.0648
Viswanath Nagarajan
Anupam Gupta, MohammadTaghi Hajiaghayi, Viswanath Nagarajan, R. Ravi
Dial a Ride from k-forest
Preliminary version in Proc. European Symposium on Algorithms, 2007
null
null
null
cs.DS
null
The k-forest problem is a common generalization of both the k-MST and the dense-$k$-subgraph problems. Formally, given a metric space on $n$ vertices $V$, with $m$ demand pairs $\subseteq V \times V$ and a ``target'' $k\le m$, the goal is to find a minimum cost subgraph that connects at least $k$ demand pairs. In thi...
[ { "version": "v1", "created": "Wed, 4 Jul 2007 16:08:40 GMT" } ]
2007-07-05T00:00:00
[ [ "Gupta", "Anupam", "" ], [ "Hajiaghayi", "MohammadTaghi", "" ], [ "Nagarajan", "Viswanath", "" ], [ "Ravi", "R.", "" ] ]
0707.1051
Mark Braverman
Mark Braverman, Elchanan Mossel
Noisy Sorting Without Resampling
null
null
null
null
cs.DS
null
In this paper we study noisy sorting without re-sampling. In this problem there is an unknown order $a_{\pi(1)} < ... < a_{\pi(n)}$ where $\pi$ is a permutation on $n$ elements. The input is the status of $n \choose 2$ queries of the form $q(a_i,x_j)$, where $q(a_i,a_j) = +$ with probability at least $1/2+\ga$ if $\p...
[ { "version": "v1", "created": "Fri, 6 Jul 2007 21:30:24 GMT" } ]
2007-07-10T00:00:00
[ [ "Braverman", "Mark", "" ], [ "Mossel", "Elchanan", "" ] ]
0707.1095
Gregory Gutin
Noga Alon, Fedor V. Fomin, Gregory Gutin, Michael Krivelevich, Saket Saurabh
Better Algorithms and Bounds for Directed Maximum Leaf Problems
null
null
null
null
cs.DS cs.DM
null
The {\sc Directed Maximum Leaf Out-Branching} problem is to find an out-branching (i.e. a rooted oriented spanning tree) in a given digraph with the maximum number of leaves. In this paper, we improve known parameterized algorithms and combinatorial bounds on the number of leaves in out-branchings. We show that \be...
[ { "version": "v1", "created": "Sat, 7 Jul 2007 15:52:29 GMT" } ]
2007-07-10T00:00:00
[ [ "Alon", "Noga", "" ], [ "Fomin", "Fedor V.", "" ], [ "Gutin", "Gregory", "" ], [ "Krivelevich", "Michael", "" ], [ "Saurabh", "Saket", "" ] ]
0707.1532
Samantha Riesenfeld
Constantinos Daskalakis (1), Richard M. Karp (1), Elchanan Mossel (1), Samantha Riesenfeld (1), Elad Verbin (2) ((1) U.C. Berkeley, (2) Tel Aviv University)
Sorting and Selection in Posets
24 pages
null
null
null
cs.DS cs.DM
null
Classical problems of sorting and searching assume an underlying linear ordering of the objects being compared. In this paper, we study a more general setting, in which some pairs of objects are incomparable. This generalization is relevant in applications related to rankings in sports, college admissions, or confere...
[ { "version": "v1", "created": "Tue, 10 Jul 2007 21:52:17 GMT" } ]
2007-07-12T00:00:00
[ [ "Daskalakis", "Constantinos", "" ], [ "Karp", "Richard M.", "" ], [ "Mossel", "Elchanan", "" ], [ "Riesenfeld", "Samantha", "" ], [ "Verbin", "Elad", "" ] ]
0707.1714
Michael Mahoney
Anirban Dasgupta, Petros Drineas, Boulos Harb, Ravi Kumar, and Michael W. Mahoney
Sampling Algorithms and Coresets for Lp Regression
19 pages, 1 figure
null
null
null
cs.DS
null
The Lp regression problem takes as input a matrix $A \in \Real^{n \times d}$, a vector $b \in \Real^n$, and a number $p \in [1,\infty)$, and it returns as output a number ${\cal Z}$ and a vector $x_{opt} \in \Real^d$ such that ${\cal Z} = \min_{x \in \Real^d} ||Ax -b||_p = ||Ax_{opt}-b||_p$. In this paper, we constru...
[ { "version": "v1", "created": "Wed, 11 Jul 2007 22:04:18 GMT" } ]
2007-07-13T00:00:00
[ [ "Dasgupta", "Anirban", "" ], [ "Drineas", "Petros", "" ], [ "Harb", "Boulos", "" ], [ "Kumar", "Ravi", "" ], [ "Mahoney", "Michael W.", "" ] ]
0707.2160
Seth Pettie
Seth Pettie
Splay Trees, Davenport-Schinzel Sequences, and the Deque Conjecture
null
null
null
null
cs.DS
null
We introduce a new technique to bound the asymptotic performance of splay trees. The basic idea is to transcribe, in an indirect fashion, the rotations performed by the splay tree as a Davenport-Schinzel sequence S, none of whose subsequences are isomorphic to fixed forbidden subsequence. We direct this technique tow...
[ { "version": "v1", "created": "Sat, 14 Jul 2007 16:38:08 GMT" } ]
2007-07-17T00:00:00
[ [ "Pettie", "Seth", "" ] ]
0707.2701
Gernot Schaller
Gernot Schaller
A fixed point iteration for computing the matrix logarithm
4 pages, 3 figures, comments welcome
null
null
null
cs.NA cs.DS
null
In various areas of applied numerics, the problem of calculating the logarithm of a matrix A emerges. Since series expansions of the logarithm usually do not converge well for matrices far away from the identity, the standard numerical method calculates successive square roots. In this article, a new algorithm is pre...
[ { "version": "v1", "created": "Wed, 18 Jul 2007 11:04:27 GMT" } ]
2007-07-19T00:00:00
[ [ "Schaller", "Gernot", "" ] ]
0707.3407
Alexander Tiskin
Alexander Tiskin
Faster subsequence recognition in compressed strings
null
null
null
null
cs.DS cs.CC cs.DM
null
Computation on compressed strings is one of the key approaches to processing massive data sets. We consider local subsequence recognition problems on strings compressed by straight-line programs (SLP), which is closely related to Lempel--Ziv compression. For an SLP-compressed text of length $\bar m$, and an uncompres...
[ { "version": "v1", "created": "Mon, 23 Jul 2007 16:26:24 GMT" }, { "version": "v2", "created": "Tue, 6 Nov 2007 14:16:07 GMT" }, { "version": "v3", "created": "Fri, 11 Jan 2008 21:54:54 GMT" }, { "version": "v4", "created": "Fri, 18 Jan 2008 10:20:48 GMT" } ]
2011-11-10T00:00:00
[ [ "Tiskin", "Alexander", "" ] ]
0707.3409
Alexander Tiskin
Alexander Tiskin
Faster exon assembly by sparse spliced alignment
null
null
null
null
cs.DS cs.CC cs.CE q-bio.QM
null
Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is \emph{spliced alignment}, proposed by Gelfand et al., which scores different candidate exon chains within a DNA sequence of length $m$ by comparing them to a known related g...
[ { "version": "v1", "created": "Mon, 23 Jul 2007 16:35:54 GMT" } ]
2007-07-24T00:00:00
[ [ "Tiskin", "Alexander", "" ] ]
0707.3619
Alexander Tiskin
Alexander Tiskin
Semi-local string comparison: algorithmic techniques and applications
null
null
null
null
cs.DS cs.DM
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
A classical measure of string comparison is given by the longest common subsequence (LCS) problem on a pair of strings. We consider its generalisation, called the semi-local LCS problem, which arises naturally in many string-related problems. The semi-local LCS problem asks for the LCS scores for each of the input st...
[ { "version": "v1", "created": "Tue, 24 Jul 2007 19:12:23 GMT" }, { "version": "v10", "created": "Wed, 5 Aug 2009 16:07:43 GMT" }, { "version": "v11", "created": "Thu, 20 Aug 2009 22:16:33 GMT" }, { "version": "v12", "created": "Mon, 31 Aug 2009 13:08:55 GMT" }, { ...
2015-03-13T00:00:00
[ [ "Tiskin", "Alexander", "" ] ]
0707.3622
Yaoyun Shi
Igor Markov (University of Michigan) and Yaoyun Shi (University of Michigan)
Constant-degree graph expansions that preserve the treewidth
12 pages, 6 figures, the main result used by quant-ph/0511070
Algorithmica, Volume 59, Number 4, 461-470,2011
10.1007/s00453-009-9312-5
null
cs.DM cs.DS math.CO quant-ph
null
Many hard algorithmic problems dealing with graphs, circuits, formulas and constraints admit polynomial-time upper bounds if the underlying graph has small treewidth. The same problems often encourage reducing the maximal degree of vertices to simplify theoretical arguments or address practical concerns. Such degree ...
[ { "version": "v1", "created": "Tue, 24 Jul 2007 19:56:27 GMT" } ]
2011-11-04T00:00:00
[ [ "Markov", "Igor", "", "University of Michigan" ], [ "Shi", "Yaoyun", "", "University of\n Michigan" ] ]
0707.4448
Mohamed-Ali Belabbas
Mohamed-Ali Belabbas and Patrick J. Wolfe
On sparse representations of linear operators and the approximation of matrix products
6 pages, 3 figures; presented at the 42nd Annual Conference on Information Sciences and Systems (CISS 2008)
null
10.1109/CISS.2008.4558532
null
cs.DS cs.CC
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Thus far, sparse representations have been exploited largely in the context of robustly estimating functions in a noisy environment from a few measurements. In this context, the existence of a basis in which the signal class under consideration is sparse is used to decrease the number of necessary measurements while ...
[ { "version": "v1", "created": "Mon, 30 Jul 2007 17:20:23 GMT" }, { "version": "v2", "created": "Fri, 26 Jun 2009 12:04:44 GMT" } ]
2009-06-26T00:00:00
[ [ "Belabbas", "Mohamed-Ali", "" ], [ "Wolfe", "Patrick J.", "" ] ]
0708.0600
Michael Lee
Michael J. Lee
Complementary algorithms for graphs and percolation
5 pages, 3 figures, poster version presented at statphys23 (2007)
null
10.1103/PhysRevE.76.027702
null
cs.DS
null
A pair of complementary algorithms are presented. One of the pair is a fast method for connecting graphs with an edge. The other is a fast method for removing edges from a graph. Both algorithms employ the same tree based graph representation and so, in concert, can arbitrarily modify any graph. Since the clusters of...
[ { "version": "v1", "created": "Sat, 4 Aug 2007 02:56:13 GMT" } ]
2009-11-13T00:00:00
[ [ "Lee", "Michael J.", "" ] ]
0708.0909
Sebastien Tixeuil
L\'elia Blin (IBISC), Maria Gradinariu Potop-Butucaru (INRIA Rocquencourt, LIP6), S\'ebastien Tixeuil (INRIA Futurs, LRI)
On the Self-stabilization of Mobile Robots in Graphs
null
null
null
null
cs.DS cs.DC
null
Self-stabilization is a versatile technique to withstand any transient fault in a distributed system. Mobile robots (or agents) are one of the emerging trends in distributed computing as they mimic autonomous biologic entities. The contribution of this paper is threefold. First, we present a new model for studying mo...
[ { "version": "v1", "created": "Tue, 7 Aug 2007 09:34:14 GMT" }, { "version": "v2", "created": "Wed, 8 Aug 2007 09:11:22 GMT" } ]
2009-09-29T00:00:00
[ [ "Blin", "Lélia", "", "IBISC" ], [ "Potop-Butucaru", "Maria Gradinariu", "", "INRIA\n Rocquencourt, LIP6" ], [ "Tixeuil", "Sébastien", "", "INRIA Futurs, LRI" ] ]
0708.2351
Judit Nagy-Gy\"orgy
Judit Nagy-Gy\"orgy
Randomized algorithm for the k-server problem on decomposable spaces
11 pages
null
null
null
cs.DS cs.DM
null
We study the randomized k-server problem on metric spaces consisting of widely separated subspaces. We give a method which extends existing algorithms to larger spaces with the growth rate of the competitive quotients being at most O(log k). This method yields o(k)-competitive algorithms solving the randomized k-serv...
[ { "version": "v1", "created": "Fri, 17 Aug 2007 11:54:44 GMT" } ]
2007-08-20T00:00:00
[ [ "Nagy-György", "Judit", "" ] ]
0708.2544
Gregory Gutin
G. Gutin and E.J. Kim
On the Complexity of the Minimum Cost Homomorphism Problem for Reflexive Multipartite Tournaments
null
null
null
null
cs.DM cs.DS
null
For digraphs $D$ and $H$, a mapping $f: V(D)\dom V(H)$ is a homomorphism of $D$ to $H$ if $uv\in A(D)$ implies $f(u)f(v)\in A(H).$ For a fixed digraph $H$, the homomorphism problem is to decide whether an input digraph $D$ admits a homomorphism to $H$ or not, and is denoted as HOMP($H$). Digraphs are allowed to have ...
[ { "version": "v1", "created": "Sun, 19 Aug 2007 13:00:59 GMT" } ]
2007-08-21T00:00:00
[ [ "Gutin", "G.", "" ], [ "Kim", "E. J.", "" ] ]
0708.2545
Gregory Gutin
E.J. Kim and G. Gutin
Complexity of the Minimum Cost Homomorphism Problem for Semicomplete Digraphs with Possible Loops
null
null
null
null
cs.DM cs.DS
null
For digraphs $D$ and $H$, a mapping $f: V(D)\dom V(H)$ is a homomorphism of $D$ to $H$ if $uv\in A(D)$ implies $f(u)f(v)\in A(H).$ For a fixed digraph $H$, the homomorphism problem is to decide whether an input digraph $D$ admits a homomorphism to $H$ or not, and is denoted as HOM($H$). An optimization version of t...
[ { "version": "v1", "created": "Sun, 19 Aug 2007 13:47:00 GMT" } ]
2007-08-21T00:00:00
[ [ "Kim", "E. J.", "" ], [ "Gutin", "G.", "" ] ]
0708.2936
David P{\l}aneta S
David S. Planeta
Priority Queue Based on Multilevel Prefix Tree
null
null
null
null
cs.DS
null
Tree structures are very often used data structures. Among ordered types of trees there are many variants whose basic operations such as insert, delete, search, delete-min are characterized by logarithmic time complexity. In the article I am going to present the structure whose time complexity for each of the above o...
[ { "version": "v1", "created": "Tue, 21 Aug 2007 22:59:49 GMT" } ]
2007-08-23T00:00:00
[ [ "Planeta", "David S.", "" ] ]
0708.3259
Rasmus Pagh
Philip Bille, Anna Pagh, Rasmus Pagh
Fast evaluation of union-intersection expressions
null
null
null
null
cs.DS cs.DB cs.IR
null
We show how to represent sets in a linear space data structure such that expressions involving unions and intersections of sets can be computed in a worst-case efficient way. This problem has applications in e.g. information retrieval and database systems. We mainly consider the RAM model of computation, and sets of ...
[ { "version": "v1", "created": "Thu, 23 Aug 2007 22:23:04 GMT" } ]
2007-08-27T00:00:00
[ [ "Bille", "Philip", "" ], [ "Pagh", "Anna", "" ], [ "Pagh", "Rasmus", "" ] ]
0708.3408
David P{\l}aneta S
David S. Planeta
Linear Time Algorithms Based on Multilevel Prefix Tree for Finding Shortest Path with Positive Weights and Minimum Spanning Tree in a Networks
null
null
null
null
cs.DS
null
In this paper I present general outlook on questions relevant to the basic graph algorithms; Finding the Shortest Path with Positive Weights and Minimum Spanning Tree. I will show so far known solution set of basic graph problems and present my own. My solutions to graph problems are characterized by their linear wor...
[ { "version": "v1", "created": "Fri, 24 Aug 2007 21:58:29 GMT" } ]
2007-08-28T00:00:00
[ [ "Planeta", "David S.", "" ] ]
0708.3696
Michael Mahoney
Petros Drineas, Michael W. Mahoney and S. Muthukrishnan
Relative-Error CUR Matrix Decompositions
40 pages, 10 figures
null
null
null
cs.DS
null
Many data analysis applications deal with large matrices and involve approximating the matrix using a small number of ``components.'' Typically, these components are linear combinations of the rows and columns of the matrix, and are thus difficult to interpret in terms of the original features of the input data. In t...
[ { "version": "v1", "created": "Mon, 27 Aug 2007 23:34:50 GMT" } ]
2007-08-29T00:00:00
[ [ "Drineas", "Petros", "" ], [ "Mahoney", "Michael W.", "" ], [ "Muthukrishnan", "S.", "" ] ]
0708.4284
Mariano Zelke
Mariano Zelke
Optimal Per-Edge Processing Times in the Semi-Streaming Model
8 pages, 1 table
Information Processing Letters, Volume 104, Issue 3, 2007, Pages 106-112
null
null
cs.DM cs.DS
null
We present semi-streaming algorithms for basic graph problems that have optimal per-edge processing times and therefore surpass all previous semi-streaming algorithms for these tasks. The semi-streaming model, which is appropriate when dealing with massive graphs, forbids random access to the input and restricts the ...
[ { "version": "v1", "created": "Fri, 31 Aug 2007 07:19:27 GMT" } ]
2007-09-03T00:00:00
[ [ "Zelke", "Mariano", "" ] ]
0708.4288
Philip Bille
Philip Bille
Pattern Matching in Trees and Strings
PhD dissertation, 140 pages
null
null
null
cs.DS
null
We study the design of efficient algorithms for combinatorial pattern matching. More concretely, we study algorithms for tree matching, string matching, and string matching in compressed texts.
[ { "version": "v1", "created": "Fri, 31 Aug 2007 08:07:32 GMT" } ]
2007-09-03T00:00:00
[ [ "Bille", "Philip", "" ] ]
0708.4399
Steven G. Johnson
Xuancheng Shao and Steven G. Johnson
Type-IV DCT, DST, and MDCT algorithms with reduced numbers of arithmetic operations
11 pages
Signal Processing vol. 88, issue 6, p. 1313-1326 (2008)
10.1016/j.sigpro.2007.11.024
null
cs.DS cs.NA
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
We present algorithms for the type-IV discrete cosine transform (DCT-IV) and discrete sine transform (DST-IV), as well as for the modified discrete cosine transform (MDCT) and its inverse, that achieve a lower count of real multiplications and additions than previously published algorithms, without sacrificing numeri...
[ { "version": "v1", "created": "Fri, 31 Aug 2007 18:00:33 GMT" }, { "version": "v2", "created": "Thu, 29 Jan 2009 19:18:21 GMT" } ]
2009-01-29T00:00:00
[ [ "Shao", "Xuancheng", "" ], [ "Johnson", "Steven G.", "" ] ]
0709.0511
Oskar Sandberg
Oskar Sandberg
Double Clustering and Graph Navigability
null
null
null
null
math.PR cs.DS math.CO
null
Graphs are called navigable if one can find short paths through them using only local knowledge. It has been shown that for a graph to be navigable, its construction needs to meet strict criteria. Since such graphs nevertheless seem to appear in nature, it is of interest to understand why these criteria should be ful...
[ { "version": "v1", "created": "Tue, 4 Sep 2007 19:38:14 GMT" } ]
2007-09-05T00:00:00
[ [ "Sandberg", "Oskar", "" ] ]
0709.0624
Martin Ziegler
Katharina L\"urwer-Br\"uggemeier and Martin Ziegler
On Faster Integer Calculations using Non-Arithmetic Primitives
null
null
null
null
cs.DS
null
The unit cost model is both convenient and largely realistic for describing integer decision algorithms over (+,*). Additional operations like division with remainder or bitwise conjunction, although equally supported by computing hardware, may lead to a considerable drop in complexity. We show a variety of concrete ...
[ { "version": "v1", "created": "Wed, 5 Sep 2007 11:34:54 GMT" } ]
2007-09-06T00:00:00
[ [ "Lürwer-Brüggemeier", "Katharina", "" ], [ "Ziegler", "Martin", "" ] ]
0709.0670
Daniil Ryabko
Daniil Ryabko, Juergen Schmidhuber
Using Data Compressors to Construct Rank Tests
null
Applied Mathematics Letters, 22:7, 1029-1032, 2009
null
null
cs.DS cs.IT math.IT
null
Nonparametric rank tests for homogeneity and component independence are proposed, which are based on data compressors. For homogeneity testing the idea is to compress the binary string obtained by ordering the two joint samples and writing 0 if the element is from the first sample and 1 if it is from the second sampl...
[ { "version": "v1", "created": "Wed, 5 Sep 2007 15:06:04 GMT" } ]
2012-02-28T00:00:00
[ [ "Ryabko", "Daniil", "" ], [ "Schmidhuber", "Juergen", "" ] ]
0709.0677
Binhai Zhu
Binhai Zhu
On the Complexity of Protein Local Structure Alignment Under the Discrete Fr\'echet Distance
11 pages, 2 figures
null
null
null
cs.CC cs.DS
null
We show that given $m$ proteins (or protein backbones, which are modeled as 3D polygonal chains each of length O(n)) the problem of protein local structure alignment under the discrete Fr\'{e}chet distance is as hard as Independent Set. So the problem does not admit any approximation of factor $n^{1-\epsilon}$. This ...
[ { "version": "v1", "created": "Wed, 5 Sep 2007 15:30:54 GMT" } ]
2007-09-06T00:00:00
[ [ "Zhu", "Binhai", "" ] ]
0709.0974
Sergey Gubin
Sergey Gubin
Finding Paths and Cycles in Graphs
11 pages
null
null
null
cs.DM cs.CC cs.DS math.CO
null
A polynomial time algorithm which detects all paths and cycles of all lengths in form of vertex pairs (start, finish).
[ { "version": "v1", "created": "Fri, 7 Sep 2007 00:04:20 GMT" } ]
2007-09-10T00:00:00
[ [ "Gubin", "Sergey", "" ] ]
0709.1227
Yanghua Xiao
Yanghua Xiao, Wentao Wu, Wei Wang and Zhengying He
Efficient Algorithms for Node Disjoint Subgraph Homeomorphism Determination
15 pages, 11 figures, submitted to DASFAA 2008
In Proceeding of 13th International Conference on Database Systems for Advanced Applications, 2008
10.1007/978-3-540-78568-2
null
cs.DS cs.DB
null
Recently, great efforts have been dedicated to researches on the management of large scale graph based data such as WWW, social networks, biological networks. In the study of graph based data management, node disjoint subgraph homeomorphism relation between graphs is more suitable than (sub)graph isomorphism in many ...
[ { "version": "v1", "created": "Sat, 8 Sep 2007 18:14:47 GMT" } ]
2008-10-09T00:00:00
[ [ "Xiao", "Yanghua", "" ], [ "Wu", "Wentao", "" ], [ "Wang", "Wei", "" ], [ "He", "Zhengying", "" ] ]
0709.2016
Konstantin Avrachenkov
Konstantin Avrachenkov, Nelly Litvak, Kim Son Pham
Distribution of PageRank Mass Among Principle Components of the Web
null
null
null
null
cs.NI cs.DS
null
We study the PageRank mass of principal components in a bow-tie Web Graph, as a function of the damping factor c. Using a singular perturbation approach, we show that the PageRank share of IN and SCC components remains high even for very large values of the damping factor, in spite of the fact that it drops to zero w...
[ { "version": "v1", "created": "Thu, 13 Sep 2007 08:29:53 GMT" } ]
2007-09-14T00:00:00
[ [ "Avrachenkov", "Konstantin", "" ], [ "Litvak", "Nelly", "" ], [ "Pham", "Kim Son", "" ] ]
0709.2562
Paolo Laureti
Marcel Blattner, Alexander Hunziker, Paolo Laureti
When are recommender systems useful?
null
null
null
null
cs.IR cs.CY cs.DL cs.DS physics.data-an physics.soc-ph
null
Recommender systems are crucial tools to overcome the information overload brought about by the Internet. Rigorous tests are needed to establish to what extent sophisticated methods can improve the quality of the predictions. Here we analyse a refined correlation-based collaborative filtering algorithm and compare it...
[ { "version": "v1", "created": "Mon, 17 Sep 2007 09:27:07 GMT" } ]
2007-09-19T00:00:00
[ [ "Blattner", "Marcel", "" ], [ "Hunziker", "Alexander", "" ], [ "Laureti", "Paolo", "" ] ]
0709.2961
Andreas Schutt
Andreas Schutt and Peter J. Stuckey
Incremental Satisfiability and Implication for UTVPI Constraints
14 pages, 1 figure
null
null
null
cs.DS cs.CG cs.LO
null
Unit two-variable-per-inequality (UTVPI) constraints form one of the largest class of integer constraints which are polynomial time solvable (unless P=NP). There is considerable interest in their use for constraint solving, abstract interpretation, spatial databases, and theorem proving. In this paper we develop a ne...
[ { "version": "v1", "created": "Wed, 19 Sep 2007 06:58:05 GMT" } ]
2007-09-20T00:00:00
[ [ "Schutt", "Andreas", "" ], [ "Stuckey", "Peter J.", "" ] ]
0709.3034
Anastasia Analyti
Carlo Meghini, Yannis Tzitzikas, Anastasia Analyti
Query Evaluation in P2P Systems of Taxonomy-based Sources: Algorithms, Complexity, and Optimizations
null
null
null
null
cs.DB cs.DC cs.DS cs.LO
null
In this study, we address the problem of answering queries over a peer-to-peer system of taxonomy-based sources. A taxonomy states subsumption relationships between negation-free DNF formulas on terms and negation-free conjunctions of terms. To the end of laying the foundations of our study, we first consider the cen...
[ { "version": "v1", "created": "Wed, 19 Sep 2007 15:10:05 GMT" } ]
2007-09-20T00:00:00
[ [ "Meghini", "Carlo", "" ], [ "Tzitzikas", "Yannis", "" ], [ "Analyti", "Anastasia", "" ] ]
0709.3384
Mariano Zelke
Mariano Zelke
Weighted Matching in the Semi-Streaming Model
12 pages, 2 figures
Proceedings of the 25th Annual Symposium on the Theoretical Aspects of Computer Science - STACS 2008, Bordeaux : France (2008)
null
null
cs.DM cs.DS
null
We reduce the best known approximation ratio for finding a weighted matching of a graph using a one-pass semi-streaming algorithm from 5.828 to 5.585. The semi-streaming model forbids random access to the input and restricts the memory to O(n*polylog(n)) bits. It was introduced by Muthukrishnan in 2003 and is appropr...
[ { "version": "v1", "created": "Fri, 21 Sep 2007 09:34:19 GMT" } ]
2008-02-25T00:00:00
[ [ "Zelke", "Mariano", "" ] ]
0709.4273
Sergey Gubin
Sergey Gubin
Set Matrices and The Path/Cycle Problem
7 pages
null
null
null
cs.DM cs.CC cs.DS math.CO
null
Presentation of set matrices and demonstration of their efficiency as a tool using the path/cycle problem.
[ { "version": "v1", "created": "Wed, 26 Sep 2007 21:44:10 GMT" } ]
2007-09-28T00:00:00
[ [ "Gubin", "Sergey", "" ] ]
0710.0083
Andrew McGregor
Stanislav Angelov, Keshav Kunal, Andrew McGregor
Sorting and Selection with Random Costs
null
null
null
null
cs.DS
null
There is a growing body of work on sorting and selection in models other than the unit-cost comparison model. This work is the first treatment of a natural stochastic variant of the problem where the cost of comparing two elements is a random variable. Each cost is chosen independently and is known to the algorithm. ...
[ { "version": "v1", "created": "Sat, 29 Sep 2007 18:10:28 GMT" } ]
2007-10-02T00:00:00
[ [ "Angelov", "Stanislav", "" ], [ "Kunal", "Keshav", "" ], [ "McGregor", "Andrew", "" ] ]
0710.0262
Sebastian Roch
Elchanan Mossel and Sebastien Roch
Incomplete Lineage Sorting: Consistent Phylogeny Estimation From Multiple Loci
Added a section on more general distance-based methods
null
null
null
q-bio.PE cs.CE cs.DS math.PR math.ST stat.TH
null
We introduce a simple algorithm for reconstructing phylogenies from multiple gene trees in the presence of incomplete lineage sorting, that is, when the topology of the gene trees may differ from that of the species tree. We show that our technique is statistically consistent under standard stochastic assumptions, th...
[ { "version": "v1", "created": "Mon, 1 Oct 2007 11:11:43 GMT" }, { "version": "v2", "created": "Fri, 2 Nov 2007 03:41:04 GMT" } ]
2011-09-30T00:00:00
[ [ "Mossel", "Elchanan", "" ], [ "Roch", "Sebastien", "" ] ]
0710.0318
Alexander Tiskin
Vladimir Deineko and Alexander Tiskin
Fast minimum-weight double-tree shortcutting for Metric TSP: Is the best one good enough?
null
null
null
null
cs.DS cs.CC
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
The Metric Traveling Salesman Problem (TSP) is a classical NP-hard optimization problem. The double-tree shortcutting method for Metric TSP yields an exponentially-sized space of TSP tours, each of which approximates the optimal solution within at most a factor of 2. We consider the problem of finding among these tou...
[ { "version": "v1", "created": "Mon, 1 Oct 2007 15:25:18 GMT" }, { "version": "v2", "created": "Sat, 20 Jun 2009 16:17:30 GMT" }, { "version": "v3", "created": "Thu, 16 Jul 2009 16:17:25 GMT" } ]
2009-07-16T00:00:00
[ [ "Deineko", "Vladimir", "" ], [ "Tiskin", "Alexander", "" ] ]
0710.0539
Anthony A. Ruffa
Anthony A. Ruffa
A Novel Solution to the ATT48 Benchmark Problem
null
null
null
null
cs.DS cs.CC
null
A solution to the benchmark ATT48 Traveling Salesman Problem (from the TSPLIB95 library) results from isolating the set of vertices into ten open-ended zones with nine lengthwise boundaries. In each zone, a minimum-length Hamiltonian Path (HP) is found for each combination of boundary vertices, leading to an approxim...
[ { "version": "v1", "created": "Tue, 2 Oct 2007 14:26:33 GMT" } ]
2007-10-03T00:00:00
[ [ "Ruffa", "Anthony A.", "" ] ]
0710.1001
Vitaliy Kurlin
V. Kurlin, L. Mihaylova
Connectivity of Random 1-Dimensional Networks
12 pages, 10 figures
null
null
null
cs.IT cs.DS math.IT stat.AP
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
An important problem in wireless sensor networks is to find the minimal number of randomly deployed sensors making a network connected with a given probability. In practice sensors are often deployed one by one along a trajectory of a vehicle, so it is natural to assume that arbitrary probability density functions of...
[ { "version": "v1", "created": "Thu, 4 Oct 2007 12:57:34 GMT" }, { "version": "v2", "created": "Fri, 9 Oct 2009 21:01:10 GMT" } ]
2009-10-10T00:00:00
[ [ "Kurlin", "V.", "" ], [ "Mihaylova", "L.", "" ] ]
0710.1435
Michael Mahoney
Petros Drineas, Michael W. Mahoney, S. Muthukrishnan, and Tamas Sarlos
Faster Least Squares Approximation
25 pages; minor changes from previous version; this version will appear in Numerische Mathematik
null
null
null
cs.DS
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Least squares approximation is a technique to find an approximate solution to a system of linear equations that has no exact solution. In a typical setting, one lets $n$ be the number of constraints and $d$ be the number of variables, with $n \gg d$. Then, existing exact methods find a solution vector in $O(nd^2)$ ti...
[ { "version": "v1", "created": "Sun, 7 Oct 2007 17:37:37 GMT" }, { "version": "v2", "created": "Mon, 25 May 2009 23:01:43 GMT" }, { "version": "v3", "created": "Mon, 3 May 2010 06:55:54 GMT" }, { "version": "v4", "created": "Sun, 26 Sep 2010 18:36:00 GMT" } ]
2010-09-28T00:00:00
[ [ "Drineas", "Petros", "" ], [ "Mahoney", "Michael W.", "" ], [ "Muthukrishnan", "S.", "" ], [ "Sarlos", "Tamas", "" ] ]
0710.1525
Sebastiano Vigna
Sebastiano Vigna, Paolo Boldi
Efficient Optimally Lazy Algorithms for Minimal-Interval Semantics
24 pages, 4 figures. A preliminary (now outdated) version was presented at SPIRE 2006
null
null
null
cs.DS cs.IR
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Minimal-interval semantics associates with each query over a document a set of intervals, called witnesses, that are incomparable with respect to inclusion (i.e., they form an antichain): witnesses define the minimal regions of the document satisfying the query. Minimal-interval semantics makes it easy to define and ...
[ { "version": "v1", "created": "Mon, 8 Oct 2007 12:15:48 GMT" }, { "version": "v2", "created": "Thu, 11 Aug 2016 08:57:30 GMT" } ]
2016-08-12T00:00:00
[ [ "Vigna", "Sebastiano", "" ], [ "Boldi", "Paolo", "" ] ]
0710.1842
Frank Ruskey
Frank Ruskey and Aaron Williams
An explicit universal cycle for the (n-1)-permutations of an n-set
null
null
null
null
cs.DM cs.DS
null
We show how to construct an explicit Hamilton cycle in the directed Cayley graph Cay({\sigma_n, sigma_{n-1}} : \mathbb{S}_n), where \sigma_k = (1 2 >... k). The existence of such cycles was shown by Jackson (Discrete Mathematics, 149 (1996) 123-129) but the proof only shows that a certain directed graph is Eulerian, ...
[ { "version": "v1", "created": "Tue, 9 Oct 2007 18:06:05 GMT" } ]
2007-10-10T00:00:00
[ [ "Ruskey", "Frank", "" ], [ "Williams", "Aaron", "" ] ]
0710.2532
Maxwell Young
Valerie King, Cynthia Phillips, Jared Saia and Maxwell Young
Sleeping on the Job: Energy-Efficient Broadcast for Radio Networks
15 pages, 1 figure
null
null
null
cs.DS
null
We address the problem of minimizing power consumption when performing reliable broadcast on a radio network under the following popular model. Each node in the network is located on a point in a two dimensional grid, and whenever a node sends a message, all awake nodes within distance r receive the message. In the b...
[ { "version": "v1", "created": "Fri, 12 Oct 2007 19:56:45 GMT" } ]
2007-10-15T00:00:00
[ [ "King", "Valerie", "" ], [ "Phillips", "Cynthia", "" ], [ "Saia", "Jared", "" ], [ "Young", "Maxwell", "" ] ]
0710.3246
John Talbot
David Talbot and John Talbot
Bloom maps
15 pages
null
null
null
cs.DS cs.IT math.IT
null
We consider the problem of succinctly encoding a static map to support approximate queries. We derive upper and lower bounds on the space requirements in terms of the error rate and the entropy of the distribution of values over keys: our bounds differ by a factor log e. For the upper bound we introduce a novel data ...
[ { "version": "v1", "created": "Wed, 17 Oct 2007 09:35:14 GMT" } ]
2007-10-18T00:00:00
[ [ "Talbot", "David", "" ], [ "Talbot", "John", "" ] ]
0710.3603
Jakub Mare\v{c}ek
Edmund K. Burke, Jakub Marecek, Andrew J. Parkes, and Hana Rudova
On a Clique-Based Integer Programming Formulation of Vertex Colouring with Applications in Course Timetabling
null
Annals of Operations Research (2010) 179(1), 105-130
10.1007/s10479-010-0716-z
null
cs.DM cs.DS math.CO
http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Vertex colouring is a well-known problem in combinatorial optimisation, whose alternative integer programming formulations have recently attracted considerable attention. This paper briefly surveys seven known formulations of vertex colouring and introduces a formulation of vertex colouring using a suitable clique pa...
[ { "version": "v1", "created": "Thu, 18 Oct 2007 21:38:37 GMT" }, { "version": "v2", "created": "Sat, 10 Nov 2007 19:03:39 GMT" }, { "version": "v3", "created": "Tue, 7 Jul 2009 19:55:23 GMT" } ]
2014-04-10T00:00:00
[ [ "Burke", "Edmund K.", "" ], [ "Marecek", "Jakub", "" ], [ "Parkes", "Andrew J.", "" ], [ "Rudova", "Hana", "" ] ]
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