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class MaskFormerSwinModelOutputWithPooling(ModelOutput):
"""
Class for MaskFormerSwinModel's outputs that also contains the spatial dimensions of the hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state after a mean pooling operation.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
hidden_states_spatial_dimensions (`tuple(tuple(int, int))`, *optional*):
A tuple containing the spatial dimension of each `hidden_state` needed to reshape the `hidden_states` to
`batch, channels, height, width`. Due to padding, their spatial size cannot be inferred before the
`forward` method.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_spatial_dimensions: Tuple[Tuple[int, int]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 1,419 | 3,446 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,200 |
class MaskFormerSwinBaseModelOutput(ModelOutput):
"""
Class for SwinEncoder's outputs.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
hidden_states_spatial_dimensions (`tuple(tuple(int, int))`, *optional*):
A tuple containing the spatial dimension of each `hidden_state` needed to reshape the `hidden_states` to
`batch, channels, height, width`. Due to padding, their spatial size cannot inferred before the `forward`
method.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_spatial_dimensions: Tuple[Tuple[int, int]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 3,460 | 5,212 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,201 |
class MaskFormerSwinEmbeddings(nn.Module):
"""
Construct the patch and position embeddings.
"""
def __init__(self, config):
super().__init__()
self.patch_embeddings = MaskFormerSwinPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
self.patch_grid = self.patch_embeddings.grid_size
if config.use_absolute_embeddings:
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.embed_dim))
else:
self.position_embeddings = None
self.norm = nn.LayerNorm(config.embed_dim)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.patch_size = config.patch_size
# Copied from transformers.models.vit.modeling_vit.ViTEmbeddings.interpolate_pos_encoding
def interpolate_pos_encoding(self, embeddings: torch.Tensor, height: int, width: int) -> torch.Tensor:
"""
This method allows to interpolate the pre-trained position encodings, to be able to use the model on higher resolution
images. This method is also adapted to support torch.jit tracing.
Adapted from:
- https://github.com/facebookresearch/dino/blob/de9ee3df6cf39fac952ab558447af1fa1365362a/vision_transformer.py#L174-L194, and
- https://github.com/facebookresearch/dinov2/blob/e1277af2ba9496fbadf7aec6eba56e8d882d1e35/dinov2/models/vision_transformer.py#L179-L211
"""
num_patches = embeddings.shape[1] - 1
num_positions = self.position_embeddings.shape[1] - 1
# always interpolate when tracing to ensure the exported model works for dynamic input shapes
if not torch.jit.is_tracing() and num_patches == num_positions and height == width:
return self.position_embeddings
class_pos_embed = self.position_embeddings[:, :1]
patch_pos_embed = self.position_embeddings[:, 1:]
dim = embeddings.shape[-1]
new_height = height // self.patch_size
new_width = width // self.patch_size
sqrt_num_positions = torch_int(num_positions**0.5)
patch_pos_embed = patch_pos_embed.reshape(1, sqrt_num_positions, sqrt_num_positions, dim)
patch_pos_embed = patch_pos_embed.permute(0, 3, 1, 2)
patch_pos_embed = nn.functional.interpolate(
patch_pos_embed,
size=(new_height, new_width),
mode="bicubic",
align_corners=False,
)
patch_pos_embed = patch_pos_embed.permute(0, 2, 3, 1).view(1, -1, dim)
return torch.cat((class_pos_embed, patch_pos_embed), dim=1)
def forward(self, pixel_values, interpolate_pos_encoding):
_, num_channels, height, width = pixel_values.shape
embeddings, output_dimensions = self.patch_embeddings(pixel_values)
embeddings = self.norm(embeddings)
if self.position_embeddings is not None:
if interpolate_pos_encoding:
embeddings = embeddings + self.interpolate_pos_encoding(embeddings, height, width)
else:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings, output_dimensions | class_definition | 7,376 | 10,590 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,202 |
class MaskFormerSwinPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.embed_dim
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.grid_size = (image_size[0] // patch_size[0], image_size[1] // patch_size[1])
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def maybe_pad(self, pixel_values, height, width):
if width % self.patch_size[1] != 0:
pad_values = (0, self.patch_size[1] - width % self.patch_size[1])
pixel_values = nn.functional.pad(pixel_values, pad_values)
if height % self.patch_size[0] != 0:
pad_values = (0, 0, 0, self.patch_size[0] - height % self.patch_size[0])
pixel_values = nn.functional.pad(pixel_values, pad_values)
return pixel_values
def forward(self, pixel_values: Optional[torch.FloatTensor]) -> Tuple[torch.Tensor, Tuple[int]]:
_, num_channels, height, width = pixel_values.shape
# pad the input to be divisible by self.patch_size, if needed
pixel_values = self.maybe_pad(pixel_values, height, width)
embeddings = self.projection(pixel_values)
_, _, height, width = embeddings.shape
output_dimensions = (height, width)
embeddings = embeddings.flatten(2).transpose(1, 2)
return embeddings, output_dimensions | class_definition | 10,692 | 12,882 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,203 |
class MaskFormerSwinPatchMerging(nn.Module):
"""
Patch Merging Layer.
Args:
input_resolution (`Tuple[int]`):
Resolution of input feature.
dim (`int`):
Number of input channels.
norm_layer (`nn.Module`, *optional*, defaults to `nn.LayerNorm`):
Normalization layer class.
"""
def __init__(self, input_resolution: Tuple[int], dim: int, norm_layer: nn.Module = nn.LayerNorm) -> None:
super().__init__()
self.input_resolution = input_resolution
self.dim = dim
self.reduction = nn.Linear(4 * dim, 2 * dim, bias=False)
self.norm = norm_layer(4 * dim)
def maybe_pad(self, input_feature, height, width):
should_pad = (height % 2 == 1) or (width % 2 == 1)
if should_pad:
pad_values = (0, 0, 0, width % 2, 0, height % 2)
input_feature = nn.functional.pad(input_feature, pad_values)
return input_feature
def forward(self, input_feature: torch.Tensor, input_dimensions: Tuple[int, int]) -> torch.Tensor:
height, width = input_dimensions
# `dim` is height * width
batch_size, dim, num_channels = input_feature.shape
input_feature = input_feature.view(batch_size, height, width, num_channels)
# pad input to be disible by width and height, if needed
input_feature = self.maybe_pad(input_feature, height, width)
# [batch_size, height/2, width/2, num_channels]
input_feature_0 = input_feature[:, 0::2, 0::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_1 = input_feature[:, 1::2, 0::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_2 = input_feature[:, 0::2, 1::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_3 = input_feature[:, 1::2, 1::2, :]
# batch_size height/2 width/2 4*num_channels
input_feature = torch.cat([input_feature_0, input_feature_1, input_feature_2, input_feature_3], -1)
input_feature = input_feature.view(batch_size, -1, 4 * num_channels) # batch_size height/2*width/2 4*C
input_feature = self.norm(input_feature)
input_feature = self.reduction(input_feature)
return input_feature | class_definition | 12,955 | 15,243 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,204 |
class MaskFormerSwinDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob) | class_definition | 15,338 | 15,826 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,205 |
class MaskFormerSwinSelfAttention(nn.Module):
def __init__(self, config, dim, num_heads, window_size):
super().__init__()
if dim % num_heads != 0:
raise ValueError(
f"The hidden size ({dim}) is not a multiple of the number of attention heads ({num_heads})"
)
self.num_attention_heads = num_heads
self.attention_head_size = int(dim / num_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.window_size = (
window_size if isinstance(window_size, collections.abc.Iterable) else (window_size, window_size)
)
self.relative_position_bias_table = nn.Parameter(
torch.zeros((2 * self.window_size[0] - 1) * (2 * self.window_size[1] - 1), num_heads)
)
# get pair-wise relative position index for each token inside the window
coords_h = torch.arange(self.window_size[0])
coords_w = torch.arange(self.window_size[1])
coords = torch.stack(meshgrid([coords_h, coords_w], indexing="ij"))
coords_flatten = torch.flatten(coords, 1)
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :]
relative_coords = relative_coords.permute(1, 2, 0).contiguous()
relative_coords[:, :, 0] += self.window_size[0] - 1
relative_coords[:, :, 1] += self.window_size[1] - 1
relative_coords[:, :, 0] *= 2 * self.window_size[1] - 1
relative_position_index = relative_coords.sum(-1)
self.register_buffer("relative_position_index", relative_position_index)
self.query = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
batch_size, dim, num_channels = hidden_states.shape
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
relative_position_bias = self.relative_position_bias_table[self.relative_position_index.view(-1)]
relative_position_bias = relative_position_bias.view(
self.window_size[0] * self.window_size[1], self.window_size[0] * self.window_size[1], -1
)
relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous()
attention_scores = attention_scores + relative_position_bias.unsqueeze(0)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in MaskFormerSwinModel forward() function)
mask_shape = attention_mask.shape[0]
attention_scores = attention_scores.view(
batch_size // mask_shape, mask_shape, self.num_attention_heads, dim, dim
)
attention_scores = attention_scores + attention_mask.unsqueeze(1).unsqueeze(0)
attention_scores = attention_scores.view(-1, self.num_attention_heads, dim, dim)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs | class_definition | 15,926 | 20,813 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,206 |
class MaskFormerSwinSelfOutput(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(dim, dim)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states | class_definition | 20,910 | 21,357 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,207 |
class MaskFormerSwinAttention(nn.Module):
def __init__(self, config, dim, num_heads, window_size):
super().__init__()
self.self = MaskFormerSwinSelfAttention(config, dim, num_heads, window_size)
self.output = MaskFormerSwinSelfOutput(config, dim)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(hidden_states, attention_mask, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs | class_definition | 21,453 | 23,161 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,208 |
class MaskFormerSwinIntermediate(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(dim, int(config.mlp_ratio * dim))
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states | class_definition | 23,260 | 23,828 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,209 |
class MaskFormerSwinOutput(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(int(config.mlp_ratio * dim), dim)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states | class_definition | 23,921 | 24,350 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,210 |
class MaskFormerSwinLayer(nn.Module):
def __init__(self, config, dim, input_resolution, num_heads, drop_path_rate=0.0, shift_size=0):
super().__init__()
self.shift_size = shift_size
self.window_size = config.window_size
self.input_resolution = input_resolution
self.layernorm_before = nn.LayerNorm(dim, eps=config.layer_norm_eps)
self.attention = MaskFormerSwinAttention(config, dim, num_heads, self.window_size)
self.drop_path = MaskFormerSwinDropPath(drop_path_rate) if drop_path_rate > 0.0 else nn.Identity()
self.layernorm_after = nn.LayerNorm(dim, eps=config.layer_norm_eps)
self.intermediate = MaskFormerSwinIntermediate(config, dim)
self.output = MaskFormerSwinOutput(config, dim)
def get_attn_mask(self, input_resolution):
if self.shift_size > 0:
# calculate attention mask for SW-MSA
height, width = input_resolution
img_mask = torch.zeros((1, height, width, 1))
height_slices = (
slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None),
)
width_slices = (
slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None),
)
count = 0
for height_slice in height_slices:
for width_slice in width_slices:
img_mask[:, height_slice, width_slice, :] = count
count += 1
mask_windows = window_partition(img_mask, self.window_size)
mask_windows = mask_windows.view(-1, self.window_size * self.window_size)
attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
attn_mask = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))
else:
attn_mask = None
return attn_mask
def maybe_pad(self, hidden_states, height, width):
pad_left = pad_top = 0
pad_rigth = (self.window_size - width % self.window_size) % self.window_size
pad_bottom = (self.window_size - height % self.window_size) % self.window_size
pad_values = (0, 0, pad_left, pad_rigth, pad_top, pad_bottom)
hidden_states = nn.functional.pad(hidden_states, pad_values)
return hidden_states, pad_values
def forward(self, hidden_states, input_dimensions, head_mask=None, output_attentions=False):
height, width = input_dimensions
batch_size, dim, channels = hidden_states.size()
shortcut = hidden_states
hidden_states = self.layernorm_before(hidden_states)
hidden_states = hidden_states.view(batch_size, height, width, channels)
# pad hidden_states to multiples of window size
hidden_states, pad_values = self.maybe_pad(hidden_states, height, width)
_, height_pad, width_pad, _ = hidden_states.shape
# cyclic shift
if self.shift_size > 0:
shifted_hidden_states = torch.roll(hidden_states, shifts=(-self.shift_size, -self.shift_size), dims=(1, 2))
else:
shifted_hidden_states = hidden_states
# partition windows
hidden_states_windows = window_partition(shifted_hidden_states, self.window_size)
hidden_states_windows = hidden_states_windows.view(-1, self.window_size * self.window_size, channels)
attn_mask = self.get_attn_mask((height_pad, width_pad))
if attn_mask is not None:
attn_mask = attn_mask.to(hidden_states_windows.device)
self_attention_outputs = self.attention(
hidden_states_windows, attn_mask, head_mask, output_attentions=output_attentions
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
attention_windows = attention_output.view(-1, self.window_size, self.window_size, channels)
shifted_windows = window_reverse(
attention_windows, self.window_size, height_pad, width_pad
) # B height' width' C
# reverse cyclic shift
if self.shift_size > 0:
attention_windows = torch.roll(shifted_windows, shifts=(self.shift_size, self.shift_size), dims=(1, 2))
else:
attention_windows = shifted_windows
was_padded = pad_values[3] > 0 or pad_values[5] > 0
if was_padded:
attention_windows = attention_windows[:, :height, :width, :].contiguous()
attention_windows = attention_windows.view(batch_size, height * width, channels)
hidden_states = shortcut + self.drop_path(attention_windows)
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = hidden_states + self.output(layer_output)
outputs = (layer_output,) + outputs
return outputs | class_definition | 24,353 | 29,402 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,211 |
class MaskFormerSwinStage(nn.Module):
# Copied from transformers.models.swin.modeling_swin.SwinStage.__init__ with Swin->MaskFormerSwin
def __init__(self, config, dim, input_resolution, depth, num_heads, drop_path, downsample):
super().__init__()
self.config = config
self.dim = dim
self.blocks = nn.ModuleList(
[
MaskFormerSwinLayer(
config=config,
dim=dim,
input_resolution=input_resolution,
num_heads=num_heads,
drop_path_rate=drop_path[i],
shift_size=0 if (i % 2 == 0) else config.window_size // 2,
)
for i in range(depth)
]
)
# patch merging layer
if downsample is not None:
self.downsample = downsample(input_resolution, dim=dim, norm_layer=nn.LayerNorm)
else:
self.downsample = None
self.pointing = False
def forward(
self, hidden_states, input_dimensions, head_mask=None, output_attentions=False, output_hidden_states=False
):
all_hidden_states = () if output_hidden_states else None
height, width = input_dimensions
for i, block_module in enumerate(self.blocks):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
block_hidden_states = block_module(hidden_states, input_dimensions, layer_head_mask, output_attentions)
hidden_states = block_hidden_states[0]
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.downsample is not None:
height_downsampled, width_downsampled = (height + 1) // 2, (width + 1) // 2
output_dimensions = (height, width, height_downsampled, width_downsampled)
hidden_states = self.downsample(hidden_states, input_dimensions)
else:
output_dimensions = (height, width, height, width)
return hidden_states, output_dimensions, all_hidden_states | class_definition | 29,405 | 31,604 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,212 |
class MaskFormerSwinEncoder(nn.Module):
# Copied from transformers.models.swin.modeling_swin.SwinEncoder.__init__ with Swin->MaskFormerSwin
def __init__(self, config, grid_size):
super().__init__()
self.num_layers = len(config.depths)
self.config = config
dpr = [x.item() for x in torch.linspace(0, config.drop_path_rate, sum(config.depths))]
self.layers = nn.ModuleList(
[
MaskFormerSwinStage(
config=config,
dim=int(config.embed_dim * 2**i_layer),
input_resolution=(grid_size[0] // (2**i_layer), grid_size[1] // (2**i_layer)),
depth=config.depths[i_layer],
num_heads=config.num_heads[i_layer],
drop_path=dpr[sum(config.depths[:i_layer]) : sum(config.depths[: i_layer + 1])],
downsample=MaskFormerSwinPatchMerging if (i_layer < self.num_layers - 1) else None,
)
for i_layer in range(self.num_layers)
]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
input_dimensions,
head_mask=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_input_dimensions = ()
all_self_attentions = () if output_attentions else None
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
for i, layer_module in enumerate(self.layers):
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
layer_hidden_states, output_dimensions, layer_all_hidden_states = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
layer_head_mask,
output_attentions,
)
else:
layer_hidden_states, output_dimensions, layer_all_hidden_states = layer_module(
hidden_states,
input_dimensions,
layer_head_mask,
output_attentions,
output_hidden_states,
)
input_dimensions = (output_dimensions[-2], output_dimensions[-1])
all_input_dimensions += (input_dimensions,)
if output_hidden_states:
all_hidden_states += (layer_all_hidden_states,)
hidden_states = layer_hidden_states
if output_attentions:
all_self_attentions = all_self_attentions + (layer_all_hidden_states[1],)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return MaskFormerSwinBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
hidden_states_spatial_dimensions=all_input_dimensions,
attentions=all_self_attentions,
) | class_definition | 31,607 | 34,813 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,213 |
class MaskFormerSwinPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MaskFormerSwinConfig
base_model_prefix = "model"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
_no_split_modules = ["MaskFormerSwinStage"]
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0) | class_definition | 34,928 | 35,910 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,214 |
class MaskFormerSwinModel(MaskFormerSwinPreTrainedModel):
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.num_layers = len(config.depths)
self.num_features = int(config.embed_dim * 2 ** (self.num_layers - 1))
self.embeddings = MaskFormerSwinEmbeddings(config)
self.encoder = MaskFormerSwinEncoder(config, self.embeddings.patch_grid)
self.layernorm = nn.LayerNorm(self.num_features, eps=config.layer_norm_eps)
self.pooler = nn.AdaptiveAvgPool1d(1) if add_pooling_layer else None
def get_input_embeddings(self):
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
def forward(
self,
pixel_values=None,
head_mask=None,
output_attentions=None,
output_hidden_states=None,
interpolate_pos_encoding=False,
return_dict=None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, len(self.config.depths))
embedding_output, input_dimensions = self.embeddings(
pixel_values, interpolate_pos_encoding=interpolate_pos_encoding
)
encoder_outputs = self.encoder(
embedding_output,
input_dimensions,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs.last_hidden_state if return_dict else encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = None
if self.pooler is not None:
pooled_output = self.pooler(sequence_output.transpose(1, 2))
pooled_output = torch.flatten(pooled_output, 1)
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
hidden_states_spatial_dimensions = (input_dimensions,) + encoder_outputs.hidden_states_spatial_dimensions
return MaskFormerSwinModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
hidden_states_spatial_dimensions=hidden_states_spatial_dimensions,
attentions=encoder_outputs.attentions,
) | class_definition | 35,913 | 39,384 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,215 |
class MaskFormerSwinBackbone(MaskFormerSwinPreTrainedModel, BackboneMixin):
"""
MaskFormerSwin backbone, designed especially for the MaskFormer framework.
This classes reshapes `hidden_states` from (`batch_size, sequence_length, hidden_size)` to (`batch_size,
num_channels, height, width)`). It also adds additional layernorms after each stage.
Args:
config (`MaskFormerSwinConfig`):
The configuration used by [`MaskFormerSwinModel`].
"""
def __init__(self, config: MaskFormerSwinConfig):
super().__init__(config)
super()._init_backbone(config)
self.model = MaskFormerSwinModel(config)
if "stem" in self.out_features:
raise ValueError("This backbone does not support 'stem' in the `out_features`.")
self.num_features = [config.embed_dim] + [int(config.embed_dim * 2**i) for i in range(len(config.depths))]
self.hidden_states_norms = nn.ModuleList(
[nn.LayerNorm(num_channels) for num_channels in self.num_features[1:]]
)
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
pixel_values: Tensor,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> BackboneOutput:
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
outputs = self.model(
pixel_values, output_hidden_states=True, output_attentions=output_attentions, return_dict=True
)
# we skip the stem
hidden_states = outputs.hidden_states[1:]
# we need to reshape the hidden states to their original spatial dimensions
# spatial dimensions contains all the heights and widths of each stage, including after the embeddings
spatial_dimensions: Tuple[Tuple[int, int]] = outputs.hidden_states_spatial_dimensions
feature_maps = ()
for i, (hidden_state, stage, (height, width)) in enumerate(
zip(hidden_states, self.stage_names[1:], spatial_dimensions)
):
norm = self.hidden_states_norms[i]
# the last element corespond to the layer's last block output but before patch merging
hidden_state_unpolled = hidden_state[-1]
hidden_state_norm = norm(hidden_state_unpolled)
# the pixel decoder (FPN) expects 3D tensors (features)
batch_size, _, hidden_size = hidden_state_norm.shape
# reshape "b (h w) d -> b d h w"
hidden_state_permuted = (
hidden_state_norm.permute(0, 2, 1).view((batch_size, hidden_size, height, width)).contiguous()
)
if stage in self.out_features:
feature_maps += (hidden_state_permuted,)
if not return_dict:
output = (feature_maps,)
if output_hidden_states:
output += (outputs.hidden_states,)
if output_attentions:
output += (outputs.attentions,)
return output
return BackboneOutput(
feature_maps=feature_maps,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
) | class_definition | 39,387 | 42,976 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer_swin.py | null | 4,216 |
class TrackedStateDict:
def __init__(self, to_track: Dict):
"""This class "tracks" a python dictionary by keeping track of which item is accessed.
Args:
to_track (Dict): The dictionary we wish to track
"""
self.to_track = to_track
self._seen: Set[str] = set()
def __getitem__(self, key: str) -> Any:
return self.to_track[key]
def __setitem__(self, key: str, item: Any):
self._seen.add(key)
self.to_track[key] = item
def diff(self) -> List[str]:
"""This method returns a set difference between the keys in the tracked state dict and the one we have access so far.
This is an effective method to check if we have update all the keys
Returns:
List[str]: List of keys not yet updated
"""
return set(self.to_track.keys()) - self._seen
def copy(self) -> Dict:
# proxy the call to the internal dictionary
return self.to_track.copy() | class_definition | 1,629 | 2,624 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/convert_maskformer_original_pytorch_checkpoint_to_pytorch.py | null | 4,217 |
class Args:
"""Fake command line arguments needed by maskformer/detectron implementation"""
config_file: str | class_definition | 2,874 | 2,991 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/convert_maskformer_original_pytorch_checkpoint_to_pytorch.py | null | 4,218 |
class OriginalMaskFormerConfigToOursConverter:
def __call__(self, original_config: object) -> MaskFormerConfig:
model = original_config.MODEL
mask_former = model.MASK_FORMER
swin = model.SWIN
dataset_catalog = MetadataCatalog.get(original_config.DATASETS.TEST[0])
id2label = dict(enumerate(dataset_catalog.stuff_classes))
label2id = {label: idx for idx, label in id2label.items()}
config: MaskFormerConfig = MaskFormerConfig(
fpn_feature_size=model.SEM_SEG_HEAD.CONVS_DIM,
mask_feature_size=model.SEM_SEG_HEAD.MASK_DIM,
num_labels=model.SEM_SEG_HEAD.NUM_CLASSES,
no_object_weight=mask_former.NO_OBJECT_WEIGHT,
num_queries=mask_former.NUM_OBJECT_QUERIES,
backbone_config={
"pretrain_img_size": swin.PRETRAIN_IMG_SIZE,
"image_size": swin.PRETRAIN_IMG_SIZE,
"in_channels": 3,
"patch_size": swin.PATCH_SIZE,
"embed_dim": swin.EMBED_DIM,
"depths": swin.DEPTHS,
"num_heads": swin.NUM_HEADS,
"window_size": swin.WINDOW_SIZE,
"drop_path_rate": swin.DROP_PATH_RATE,
"model_type": "swin",
},
dice_weight=mask_former.DICE_WEIGHT,
ce_weight=1.0,
mask_weight=mask_former.MASK_WEIGHT,
decoder_config={
"model_type": "detr",
"max_position_embeddings": 1024,
"encoder_layers": 6,
"encoder_ffn_dim": 2048,
"encoder_attention_heads": 8,
"decoder_layers": mask_former.DEC_LAYERS,
"decoder_ffn_dim": mask_former.DIM_FEEDFORWARD,
"decoder_attention_heads": mask_former.NHEADS,
"encoder_layerdrop": 0.0,
"decoder_layerdrop": 0.0,
"d_model": mask_former.HIDDEN_DIM,
"dropout": mask_former.DROPOUT,
"attention_dropout": 0.0,
"activation_dropout": 0.0,
"init_std": 0.02,
"init_xavier_std": 1.0,
"scale_embedding": False,
"auxiliary_loss": False,
"dilation": False,
# default pretrained config values
},
id2label=id2label,
label2id=label2id,
)
return config | class_definition | 3,232 | 5,690 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/convert_maskformer_original_pytorch_checkpoint_to_pytorch.py | null | 4,219 |
class OriginalMaskFormerConfigToImageProcessorConverter:
def __call__(self, original_config: object) -> MaskFormerImageProcessor:
model = original_config.MODEL
model_input = original_config.INPUT
dataset_catalog = MetadataCatalog.get(original_config.DATASETS.TEST[0])
return MaskFormerImageProcessor(
image_mean=(torch.tensor(model.PIXEL_MEAN) / 255).tolist(),
image_std=(torch.tensor(model.PIXEL_STD) / 255).tolist(),
size=model_input.MIN_SIZE_TEST,
max_size=model_input.MAX_SIZE_TEST,
num_labels=model.SEM_SEG_HEAD.NUM_CLASSES,
ignore_index=dataset_catalog.ignore_label,
size_divisibility=32, # 32 is required by swin
) | class_definition | 5,693 | 6,444 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/convert_maskformer_original_pytorch_checkpoint_to_pytorch.py | null | 4,220 |
class OriginalMaskFormerCheckpointToOursConverter:
def __init__(self, original_model: nn.Module, config: MaskFormerConfig):
self.original_model = original_model
self.config = config
def pop_all(self, renamed_keys: List[Tuple[str, str]], dst_state_dict: StateDict, src_state_dict: StateDict):
for src_key, dst_key in renamed_keys:
dst_state_dict[dst_key] = src_state_dict.pop(src_key)
def replace_backbone(self, dst_state_dict: StateDict, src_state_dict: StateDict, config: MaskFormerConfig):
dst_prefix: str = "pixel_level_module.encoder"
src_prefix: str = "backbone"
renamed_keys = [
(
f"{src_prefix}.patch_embed.proj.weight",
f"{dst_prefix}.model.embeddings.patch_embeddings.projection.weight",
),
(f"{src_prefix}.patch_embed.proj.bias", f"{dst_prefix}.model.embeddings.patch_embeddings.projection.bias"),
(f"{src_prefix}.patch_embed.norm.weight", f"{dst_prefix}.model.embeddings.norm.weight"),
(f"{src_prefix}.patch_embed.norm.bias", f"{dst_prefix}.model.embeddings.norm.bias"),
]
num_layers = len(config.backbone_config.depths)
for layer_idx in range(num_layers):
for block_idx in range(config.backbone_config.depths[layer_idx]):
renamed_keys.extend(
[ # src, dst
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_bias_table",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_bias_table",
),
]
)
# now we need to handle the attentions
# read in weights + bias of input projection layer of cross-attention
src_att_weight = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight"]
src_att_bias = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias"]
size = src_att_weight.shape[0]
offset = size // 3
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.weight"
] = src_att_weight[:offset, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.bias"
] = src_att_bias[:offset]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.weight"
] = src_att_weight[offset : offset * 2, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.bias"
] = src_att_bias[offset : offset * 2]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.weight"
] = src_att_weight[-offset:, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.bias"
] = src_att_bias[-offset:]
# let's pop them
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight")
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias")
# proj
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.bias",
),
]
)
# second norm
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.bias",
),
]
)
# mlp
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.bias",
),
]
)
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_index",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_index",
)
]
)
if layer_idx < num_layers - 1:
# patch merging
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.downsample.reduction.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.reduction.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.norm.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.norm.bias",
),
]
)
# hidden states norms
renamed_keys.extend(
[
(
f"{src_prefix}.norm{layer_idx}.weight",
f"{dst_prefix}.hidden_states_norms.{layer_idx}.weight",
),
(
f"{src_prefix}.norm{layer_idx}.bias",
f"{dst_prefix}.hidden_states_norms.{layer_idx}.bias",
),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def replace_pixel_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "pixel_level_module.decoder"
src_prefix: str = "sem_seg_head.pixel_decoder"
self.replace_backbone(dst_state_dict, src_state_dict, self.config)
def rename_keys_for_conv(detectron_conv: str, mine_conv: str):
return [
(f"{detectron_conv}.weight", f"{mine_conv}.0.weight"),
# 2 cuz the have act in the middle -> rename it
(f"{detectron_conv}.norm.weight", f"{mine_conv}.1.weight"),
(f"{detectron_conv}.norm.bias", f"{mine_conv}.1.bias"),
]
renamed_keys = [
(f"{src_prefix}.mask_features.weight", f"{dst_prefix}.mask_projection.weight"),
(f"{src_prefix}.mask_features.bias", f"{dst_prefix}.mask_projection.bias"),
# the layers in the original one are in reverse order, stem is the last one!
]
renamed_keys.extend(rename_keys_for_conv(f"{src_prefix}.layer_4", f"{dst_prefix}.fpn.stem"))
# add all the fpn layers (here we need some config parameters to know the size in advance)
for src_i, dst_i in zip(range(3, 0, -1), range(0, 3)):
renamed_keys.extend(
rename_keys_for_conv(f"{src_prefix}.adapter_{src_i}", f"{dst_prefix}.fpn.layers.{dst_i}.proj")
)
renamed_keys.extend(
rename_keys_for_conv(f"{src_prefix}.layer_{src_i}", f"{dst_prefix}.fpn.layers.{dst_i}.block")
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def rename_keys_in_detr_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder"
src_prefix: str = "sem_seg_head.predictor.transformer.decoder"
# not sure why we are not popping direcetly here!
# here we list all keys to be renamed (original name on the left, our name on the right)
rename_keys = []
for i in range(self.config.decoder_config.decoder_layers):
# decoder layers: 2 times output projection, 2 feedforward neural networks and 3 layernorms
rename_keys.append(
(
f"{src_prefix}.layers.{i}.self_attn.out_proj.weight",
f"{dst_prefix}.layers.{i}.self_attn.out_proj.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.layers.{i}.self_attn.out_proj.bias",
f"{dst_prefix}.layers.{i}.self_attn.out_proj.bias",
)
)
rename_keys.append(
(
f"{src_prefix}.layers.{i}.multihead_attn.out_proj.weight",
f"{dst_prefix}.layers.{i}.encoder_attn.out_proj.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.layers.{i}.multihead_attn.out_proj.bias",
f"{dst_prefix}.layers.{i}.encoder_attn.out_proj.bias",
)
)
rename_keys.append((f"{src_prefix}.layers.{i}.linear1.weight", f"{dst_prefix}.layers.{i}.fc1.weight"))
rename_keys.append((f"{src_prefix}.layers.{i}.linear1.bias", f"{dst_prefix}.layers.{i}.fc1.bias"))
rename_keys.append((f"{src_prefix}.layers.{i}.linear2.weight", f"{dst_prefix}.layers.{i}.fc2.weight"))
rename_keys.append((f"{src_prefix}.layers.{i}.linear2.bias", f"{dst_prefix}.layers.{i}.fc2.bias"))
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm1.weight", f"{dst_prefix}.layers.{i}.self_attn_layer_norm.weight")
)
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm1.bias", f"{dst_prefix}.layers.{i}.self_attn_layer_norm.bias")
)
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm2.weight", f"{dst_prefix}.layers.{i}.encoder_attn_layer_norm.weight")
)
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm2.bias", f"{dst_prefix}.layers.{i}.encoder_attn_layer_norm.bias")
)
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm3.weight", f"{dst_prefix}.layers.{i}.final_layer_norm.weight")
)
rename_keys.append(
(f"{src_prefix}.layers.{i}.norm3.bias", f"{dst_prefix}.layers.{i}.final_layer_norm.bias")
)
return rename_keys
def replace_q_k_v_in_detr_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder"
src_prefix: str = "sem_seg_head.predictor.transformer.decoder"
for i in range(self.config.decoder_config.decoder_layers):
# read in weights + bias of input projection layer of self-attention
in_proj_weight = src_state_dict.pop(f"{src_prefix}.layers.{i}.self_attn.in_proj_weight")
in_proj_bias = src_state_dict.pop(f"{src_prefix}.layers.{i}.self_attn.in_proj_bias")
# next, add query, keys and values (in that order) to the state dict
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.q_proj.weight"] = in_proj_weight[:256, :]
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.q_proj.bias"] = in_proj_bias[:256]
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.k_proj.weight"] = in_proj_weight[256:512, :]
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.k_proj.bias"] = in_proj_bias[256:512]
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.v_proj.weight"] = in_proj_weight[-256:, :]
dst_state_dict[f"{dst_prefix}.layers.{i}.self_attn.v_proj.bias"] = in_proj_bias[-256:]
# read in weights + bias of input projection layer of cross-attention
in_proj_weight_cross_attn = src_state_dict.pop(f"{src_prefix}.layers.{i}.multihead_attn.in_proj_weight")
in_proj_bias_cross_attn = src_state_dict.pop(f"{src_prefix}.layers.{i}.multihead_attn.in_proj_bias")
# next, add query, keys and values (in that order) of cross-attention to the state dict
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.q_proj.weight"] = in_proj_weight_cross_attn[:256, :]
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.q_proj.bias"] = in_proj_bias_cross_attn[:256]
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.k_proj.weight"] = in_proj_weight_cross_attn[
256:512, :
]
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.k_proj.bias"] = in_proj_bias_cross_attn[256:512]
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.v_proj.weight"] = in_proj_weight_cross_attn[-256:, :]
dst_state_dict[f"{dst_prefix}.layers.{i}.encoder_attn.v_proj.bias"] = in_proj_bias_cross_attn[-256:]
def replace_detr_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder"
src_prefix: str = "sem_seg_head.predictor.transformer.decoder"
renamed_keys = self.rename_keys_in_detr_decoder(dst_state_dict, src_state_dict)
# add more
renamed_keys.extend(
[
(f"{src_prefix}.norm.weight", f"{dst_prefix}.layernorm.weight"),
(f"{src_prefix}.norm.bias", f"{dst_prefix}.layernorm.bias"),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
self.replace_q_k_v_in_detr_decoder(dst_state_dict, src_state_dict)
def replace_transformer_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module"
src_prefix: str = "sem_seg_head.predictor"
self.replace_detr_decoder(dst_state_dict, src_state_dict)
renamed_keys = [
(f"{src_prefix}.query_embed.weight", f"{dst_prefix}.queries_embedder.weight"),
(f"{src_prefix}.input_proj.weight", f"{dst_prefix}.input_projection.weight"),
(f"{src_prefix}.input_proj.bias", f"{dst_prefix}.input_projection.bias"),
]
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def replace_instance_segmentation_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
# NOTE in our case we don't have a prefix, thus we removed the "." from the keys later on!
dst_prefix: str = ""
src_prefix: str = "sem_seg_head.predictor"
renamed_keys = [
(f"{src_prefix}.class_embed.weight", f"{dst_prefix}class_predictor.weight"),
(f"{src_prefix}.class_embed.bias", f"{dst_prefix}class_predictor.bias"),
]
mlp_len = 3
for i in range(mlp_len):
renamed_keys.extend(
[
(f"{src_prefix}.mask_embed.layers.{i}.weight", f"{dst_prefix}mask_embedder.{i}.0.weight"),
(f"{src_prefix}.mask_embed.layers.{i}.bias", f"{dst_prefix}mask_embedder.{i}.0.bias"),
]
)
logger.info(f"Replacing keys {pformat(renamed_keys)}")
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def convert(self, mask_former: MaskFormerModel) -> MaskFormerModel:
dst_state_dict = TrackedStateDict(mask_former.state_dict())
src_state_dict = self.original_model.state_dict()
self.replace_pixel_module(dst_state_dict, src_state_dict)
self.replace_transformer_module(dst_state_dict, src_state_dict)
logger.info(f"Missed keys are {pformat(dst_state_dict.diff())}")
logger.info(f"Not copied keys are {pformat(src_state_dict.keys())}")
logger.info("🙌 Done")
mask_former.load_state_dict(dst_state_dict)
return mask_former
def convert_instance_segmentation(
self, mask_former: MaskFormerForInstanceSegmentation
) -> MaskFormerForInstanceSegmentation:
dst_state_dict = TrackedStateDict(mask_former.state_dict())
src_state_dict = self.original_model.state_dict()
self.replace_instance_segmentation_module(dst_state_dict, src_state_dict)
mask_former.load_state_dict(dst_state_dict)
return mask_former
@staticmethod
def using_dirs(checkpoints_dir: Path, config_dir: Path) -> Iterator[Tuple[object, Path, Path]]:
checkpoints: List[Path] = checkpoints_dir.glob("**/*.pkl")
for checkpoint in checkpoints:
logger.info(f"💪 Converting {checkpoint.stem}")
# find associated config file
config: Path = config_dir / checkpoint.parents[0].stem / "swin" / f"{checkpoint.stem}.yaml"
yield config, checkpoint | class_definition | 6,447 | 25,799 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/convert_maskformer_original_pytorch_checkpoint_to_pytorch.py | null | 4,221 |
class MaskFormerSwinConfig(BackboneConfigMixin, PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`MaskFormerSwinModel`]. It is used to instantiate
a Donut model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the Swin
[microsoft/swin-tiny-patch4-window7-224](https://huggingface.co/microsoft/swin-tiny-patch4-window7-224)
architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 4):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
embed_dim (`int`, *optional*, defaults to 96):
Dimensionality of patch embedding.
depths (`List[int]`, *optional*, defaults to `[2, 2, 6, 2]`):
Depth of each layer in the Transformer encoder.
num_heads (`List[int]`, *optional*, defaults to `[3, 6, 12, 24]`):
Number of attention heads in each layer of the Transformer encoder.
window_size (`int`, *optional*, defaults to 7):
Size of windows.
mlp_ratio (`float`, *optional*, defaults to 4.0):
Ratio of MLP hidden dimensionality to embedding dimensionality.
qkv_bias (`bool`, *optional*, defaults to True):
Whether or not a learnable bias should be added to the queries, keys and values.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings and encoder.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
drop_path_rate (`float`, *optional*, defaults to 0.1):
Stochastic depth rate.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder. If string, `"gelu"`, `"relu"`,
`"selu"` and `"gelu_new"` are supported.
use_absolute_embeddings (`bool`, *optional*, defaults to False):
Whether or not to add absolute position embeddings to the patch embeddings.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
out_features (`List[str]`, *optional*):
If used as backbone, list of features to output. Can be any of `"stem"`, `"stage1"`, `"stage2"`, etc.
(depending on how many stages the model has). If unset and `out_indices` is set, will default to the
corresponding stages. If unset and `out_indices` is unset, will default to the last stage. Must be in the
same order as defined in the `stage_names` attribute.
out_indices (`List[int]`, *optional*):
If used as backbone, list of indices of features to output. Can be any of 0, 1, 2, etc. (depending on how
many stages the model has). If unset and `out_features` is set, will default to the corresponding stages.
If unset and `out_features` is unset, will default to the last stage. Must be in the
same order as defined in the `stage_names` attribute.
Example:
```python
>>> from transformers import MaskFormerSwinConfig, MaskFormerSwinModel
>>> # Initializing a microsoft/swin-tiny-patch4-window7-224 style configuration
>>> configuration = MaskFormerSwinConfig()
>>> # Initializing a model (with random weights) from the microsoft/swin-tiny-patch4-window7-224 style configuration
>>> model = MaskFormerSwinModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "maskformer-swin"
attribute_map = {
"num_attention_heads": "num_heads",
"num_hidden_layers": "num_layers",
}
def __init__(
self,
image_size=224,
patch_size=4,
num_channels=3,
embed_dim=96,
depths=[2, 2, 6, 2],
num_heads=[3, 6, 12, 24],
window_size=7,
mlp_ratio=4.0,
qkv_bias=True,
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
drop_path_rate=0.1,
hidden_act="gelu",
use_absolute_embeddings=False,
initializer_range=0.02,
layer_norm_eps=1e-5,
out_features=None,
out_indices=None,
**kwargs,
):
super().__init__(**kwargs)
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.embed_dim = embed_dim
self.depths = depths
self.num_layers = len(depths)
self.num_heads = num_heads
self.window_size = window_size
self.mlp_ratio = mlp_ratio
self.qkv_bias = qkv_bias
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.drop_path_rate = drop_path_rate
self.hidden_act = hidden_act
self.use_absolute_embeddings = use_absolute_embeddings
self.layer_norm_eps = layer_norm_eps
self.initializer_range = initializer_range
# we set the hidden_size attribute in order to make Swin work with VisionEncoderDecoderModel
# this indicates the channel dimension after the last stage of the model
self.hidden_size = int(embed_dim * 2 ** (len(depths) - 1))
self.stage_names = ["stem"] + [f"stage{idx}" for idx in range(1, len(depths) + 1)]
self._out_features, self._out_indices = get_aligned_output_features_output_indices(
out_features=out_features, out_indices=out_indices, stage_names=self.stage_names
) | class_definition | 904 | 7,215 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/configuration_maskformer_swin.py | null | 4,222 |
class MaskFormerImageProcessor(BaseImageProcessor):
r"""
Constructs a MaskFormer image processor. The image processor can be used to prepare image(s) and optional targets
for the model.
This image processor inherits from [`BaseImageProcessor`] which contains most of the main methods. Users should
refer to this superclass for more information regarding those methods.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the input to a certain `size`.
size (`int`, *optional*, defaults to 800):
Resize the input to the given size. Only has an effect if `do_resize` is set to `True`. If size is a
sequence like `(width, height)`, output size will be matched to this. If size is an int, smaller edge of
the image will be matched to this number. i.e, if `height > width`, then image will be rescaled to `(size *
height / width, size)`.
size_divisor (`int`, *optional*, defaults to 32):
Some backbones need images divisible by a certain number. If not passed, it defaults to the value used in
Swin Transformer.
resample (`int`, *optional*, defaults to `Resampling.BILINEAR`):
An optional resampling filter. This can be one of `PIL.Image.Resampling.NEAREST`,
`PIL.Image.Resampling.BOX`, `PIL.Image.Resampling.BILINEAR`, `PIL.Image.Resampling.HAMMING`,
`PIL.Image.Resampling.BICUBIC` or `PIL.Image.Resampling.LANCZOS`. Only has an effect if `do_resize` is set
to `True`.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the input to a certain `scale`.
rescale_factor (`float`, *optional*, defaults to `1/ 255`):
Rescale the input by the given factor. Only has an effect if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether or not to normalize the input with mean and standard deviation.
image_mean (`int`, *optional*, defaults to `[0.485, 0.456, 0.406]`):
The sequence of means for each channel, to be used when normalizing images. Defaults to the ImageNet mean.
image_std (`int`, *optional*, defaults to `[0.229, 0.224, 0.225]`):
The sequence of standard deviations for each channel, to be used when normalizing images. Defaults to the
ImageNet std.
ignore_index (`int`, *optional*):
Label to be assigned to background pixels in segmentation maps. If provided, segmentation map pixels
denoted with 0 (background) will be replaced with `ignore_index`.
do_reduce_labels (`bool`, *optional*, defaults to `False`):
Whether or not to decrement all label values of segmentation maps by 1. Usually used for datasets where 0
is used for background, and background itself is not included in all classes of a dataset (e.g. ADE20k).
The background label will be replaced by `ignore_index`.
num_labels (`int`, *optional*):
The number of labels in the segmentation map.
"""
model_input_names = ["pixel_values", "pixel_mask"]
@deprecate_kwarg("reduce_labels", new_name="do_reduce_labels", version="4.44.0")
@deprecate_kwarg("size_divisibility", new_name="size_divisor", version="4.41.0")
@deprecate_kwarg("max_size", version="4.27.0", warn_if_greater_or_equal_version=True)
@filter_out_non_signature_kwargs(extra=["max_size", *INIT_SERVICE_KWARGS])
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
size_divisor: int = 32,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_rescale: bool = True,
rescale_factor: float = 1 / 255,
do_normalize: bool = True,
image_mean: Union[float, List[float]] = None,
image_std: Union[float, List[float]] = None,
ignore_index: Optional[int] = None,
do_reduce_labels: bool = False,
num_labels: Optional[int] = None,
**kwargs,
):
super().__init__(**kwargs)
# We make max_size a private attribute so we can pass it as a default value in the preprocess method whilst
# `size` can still be pass in as an int
self._max_size = kwargs.pop("max_size", 1333)
size = size if size is not None else {"shortest_edge": 800, "longest_edge": self._max_size}
size = get_size_dict(size, max_size=self._max_size, default_to_square=False)
self.do_resize = do_resize
self.size = size
self.resample = resample
self.size_divisor = size_divisor
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_DEFAULT_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_DEFAULT_STD
self.ignore_index = ignore_index
self.do_reduce_labels = do_reduce_labels
self.num_labels = num_labels
@classmethod
def from_dict(cls, image_processor_dict: Dict[str, Any], **kwargs):
"""
Overrides the `from_dict` method from the base class to make sure parameters are updated if image processor is
created using from_dict and kwargs e.g. `MaskFormerImageProcessor.from_pretrained(checkpoint, max_size=800)`
"""
image_processor_dict = image_processor_dict.copy()
if "max_size" in kwargs:
image_processor_dict["max_size"] = kwargs.pop("max_size")
if "size_divisibility" in kwargs:
image_processor_dict["size_divisor"] = kwargs.pop("size_divisibility")
if "reduce_labels" in image_processor_dict:
image_processor_dict["do_reduce_labels"] = image_processor_dict.pop("reduce_labels")
return super().from_dict(image_processor_dict, **kwargs)
def to_dict(self) -> Dict[str, Any]:
"""
Serializes this instance to a Python dictionary. This method calls the superclass method and then removes the
`_max_size` attribute from the dictionary.
"""
image_processor_dict = super().to_dict()
image_processor_dict.pop("_max_size", None)
return image_processor_dict
@deprecate_kwarg("max_size", version="4.27.0", warn_if_greater_or_equal_version=True)
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
size_divisor: int = 0,
resample: PILImageResampling = PILImageResampling.BILINEAR,
data_format=None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize the image to the given size. Size can be min_size (scalar) or `(height, width)` tuple. If size is an
int, smaller edge of the image will be matched to this number.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
The size of the output image.
size_divisor (`int`, *optional*, defaults to 0):
If `size_divisor` is given, the output image size will be divisible by the number.
resample (`PILImageResampling` resampling filter, *optional*, defaults to `PILImageResampling.BILINEAR`):
Resampling filter to use when resizing the image.
data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the output image. If unset, the channel dimension format of the input
image is used.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format of the input image. If not provided, it will be inferred.
"""
# Deprecated, backward compatibility
max_size = kwargs.pop("max_size", None)
size = get_size_dict(size, max_size=max_size, default_to_square=False)
if "shortest_edge" in size and "longest_edge" in size:
size, max_size = size["shortest_edge"], size["longest_edge"]
elif "height" in size and "width" in size:
size = (size["height"], size["width"])
max_size = None
else:
raise ValueError(
"Size must contain 'height' and 'width' keys or 'shortest_edge' and 'longest_edge' keys. Got"
f" {size.keys()}."
)
size = get_maskformer_resize_output_image_size(
image=image,
size=size,
max_size=max_size,
size_divisor=size_divisor,
default_to_square=False,
input_data_format=input_data_format,
)
image = resize(
image, size=size, resample=resample, data_format=data_format, input_data_format=input_data_format, **kwargs
)
return image
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.rescale
def rescale(
self,
image: np.ndarray,
rescale_factor: float,
data_format: Optional[Union[str, ChannelDimension]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""
Rescale the image by the given factor. image = image * rescale_factor.
Args:
image (`np.ndarray`):
Image to rescale.
rescale_factor (`float`):
The value to use for rescaling.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format for the output image. If unset, the channel dimension format of the input
image is used. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
input_data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format for the input image. If unset, is inferred from the input image. Can be
one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
"""
return rescale(image, rescale_factor, data_format=data_format, input_data_format=input_data_format)
def convert_segmentation_map_to_binary_masks(
self,
segmentation_map: "np.ndarray",
instance_id_to_semantic_id: Optional[Dict[int, int]] = None,
ignore_index: Optional[int] = None,
do_reduce_labels: bool = False,
):
do_reduce_labels = do_reduce_labels if do_reduce_labels is not None else self.do_reduce_labels
ignore_index = ignore_index if ignore_index is not None else self.ignore_index
return convert_segmentation_map_to_binary_masks(
segmentation_map=segmentation_map,
instance_id_to_semantic_id=instance_id_to_semantic_id,
ignore_index=ignore_index,
do_reduce_labels=do_reduce_labels,
)
def __call__(self, images, segmentation_maps=None, **kwargs) -> BatchFeature:
return self.preprocess(images, segmentation_maps=segmentation_maps, **kwargs)
def _preprocess(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = None,
resample: PILImageResampling = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
):
if do_resize:
image = self.resize(
image, size=size, size_divisor=size_divisor, resample=resample, input_data_format=input_data_format
)
if do_rescale:
image = self.rescale(image, rescale_factor=rescale_factor, input_data_format=input_data_format)
if do_normalize:
image = self.normalize(image, mean=image_mean, std=image_std, input_data_format=input_data_format)
return image
def _preprocess_image(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = None,
resample: PILImageResampling = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
data_format: Optional[Union[str, ChannelDimension]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""Preprocesses a single image."""
# All transformations expect numpy arrays.
image = to_numpy_array(image)
if do_rescale and is_scaled_image(image):
logger.warning_once(
"It looks like you are trying to rescale already rescaled images. If the input"
" images have pixel values between 0 and 1, set `do_rescale=False` to avoid rescaling them again."
)
if input_data_format is None:
input_data_format = infer_channel_dimension_format(image)
image = self._preprocess(
image=image,
do_resize=do_resize,
size=size,
size_divisor=size_divisor,
resample=resample,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
input_data_format=input_data_format,
)
if data_format is not None:
image = to_channel_dimension_format(image, data_format, input_channel_dim=input_data_format)
return image
def _preprocess_mask(
self,
segmentation_map: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = 0,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""Preprocesses a single mask."""
segmentation_map = to_numpy_array(segmentation_map)
# Add channel dimension if missing - needed for certain transformations
if segmentation_map.ndim == 2:
added_channel_dim = True
segmentation_map = segmentation_map[None, ...]
input_data_format = ChannelDimension.FIRST
else:
added_channel_dim = False
if input_data_format is None:
input_data_format = infer_channel_dimension_format(segmentation_map, num_channels=1)
# TODO: (Amy)
# Remork segmentation map processing to include reducing labels and resizing which doesn't
# drop segment IDs > 255.
segmentation_map = self._preprocess(
image=segmentation_map,
do_resize=do_resize,
resample=PILImageResampling.NEAREST,
size=size,
size_divisor=size_divisor,
do_rescale=False,
do_normalize=False,
input_data_format=input_data_format,
)
# Remove extra channel dimension if added for processing
if added_channel_dim:
segmentation_map = segmentation_map.squeeze(0)
return segmentation_map
@deprecate_kwarg("reduce_labels", new_name="do_reduce_labels", version="4.44.0")
@filter_out_non_signature_kwargs()
def preprocess(
self,
images: ImageInput,
segmentation_maps: Optional[ImageInput] = None,
instance_id_to_semantic_id: Optional[Dict[int, int]] = None,
do_resize: Optional[bool] = None,
size: Optional[Dict[str, int]] = None,
size_divisor: Optional[int] = None,
resample: PILImageResampling = None,
do_rescale: Optional[bool] = None,
rescale_factor: Optional[float] = None,
do_normalize: Optional[bool] = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
ignore_index: Optional[int] = None,
do_reduce_labels: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Union[str, ChannelDimension] = ChannelDimension.FIRST,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> BatchFeature:
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(size, default_to_square=False, max_size=self._max_size)
size_divisor = size_divisor if size_divisor is not None else self.size_divisor
resample = resample if resample is not None else self.resample
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
ignore_index = ignore_index if ignore_index is not None else self.ignore_index
do_reduce_labels = do_reduce_labels if do_reduce_labels is not None else self.do_reduce_labels
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
validate_preprocess_arguments(
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
do_resize=do_resize,
size=size,
resample=resample,
)
if segmentation_maps is not None and not valid_images(segmentation_maps):
raise ValueError(
"Invalid segmentation map type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
images = make_list_of_images(images)
if segmentation_maps is not None:
segmentation_maps = make_list_of_images(segmentation_maps, expected_ndims=2)
if segmentation_maps is not None and len(images) != len(segmentation_maps):
raise ValueError("Images and segmentation maps must have the same length.")
images = [
self._preprocess_image(
image,
do_resize=do_resize,
size=size,
size_divisor=size_divisor,
resample=resample,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
data_format=data_format,
input_data_format=input_data_format,
)
for image in images
]
if segmentation_maps is not None:
segmentation_maps = [
self._preprocess_mask(
segmentation_map, do_resize, size, size_divisor, input_data_format=input_data_format
)
for segmentation_map in segmentation_maps
]
encoded_inputs = self.encode_inputs(
images,
segmentation_maps,
instance_id_to_semantic_id,
ignore_index,
do_reduce_labels,
return_tensors,
input_data_format=data_format,
)
return encoded_inputs
# Copied from transformers.models.vilt.image_processing_vilt.ViltImageProcessor._pad_image
def _pad_image(
self,
image: np.ndarray,
output_size: Tuple[int, int],
constant_values: Union[float, Iterable[float]] = 0,
data_format: Optional[ChannelDimension] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""
Pad an image with zeros to the given size.
"""
input_height, input_width = get_image_size(image, channel_dim=input_data_format)
output_height, output_width = output_size
pad_bottom = output_height - input_height
pad_right = output_width - input_width
padding = ((0, pad_bottom), (0, pad_right))
padded_image = pad(
image,
padding,
mode=PaddingMode.CONSTANT,
constant_values=constant_values,
data_format=data_format,
input_data_format=input_data_format,
)
return padded_image
# Copied from transformers.models.vilt.image_processing_vilt.ViltImageProcessor.pad
def pad(
self,
images: List[np.ndarray],
constant_values: Union[float, Iterable[float]] = 0,
return_pixel_mask: bool = True,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Optional[ChannelDimension] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
) -> BatchFeature:
"""
Pads a batch of images to the bottom and right of the image with zeros to the size of largest height and width
in the batch and optionally returns their corresponding pixel mask.
Args:
image (`np.ndarray`):
Image to pad.
constant_values (`float` or `Iterable[float]`, *optional*):
The value to use for the padding if `mode` is `"constant"`.
return_pixel_mask (`bool`, *optional*, defaults to `True`):
Whether to return a pixel mask.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format of the input image. If not provided, it will be inferred.
"""
pad_size = get_max_height_width(images, input_data_format=input_data_format)
padded_images = [
self._pad_image(
image,
pad_size,
constant_values=constant_values,
data_format=data_format,
input_data_format=input_data_format,
)
for image in images
]
data = {"pixel_values": padded_images}
if return_pixel_mask:
masks = [
make_pixel_mask(image=image, output_size=pad_size, input_data_format=input_data_format)
for image in images
]
data["pixel_mask"] = masks
return BatchFeature(data=data, tensor_type=return_tensors)
def encode_inputs(
self,
pixel_values_list: List[ImageInput],
segmentation_maps: ImageInput = None,
instance_id_to_semantic_id: Optional[Union[List[Dict[int, int]], Dict[int, int]]] = None,
ignore_index: Optional[int] = None,
do_reduce_labels: bool = False,
return_tensors: Optional[Union[str, TensorType]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
):
"""
Pad images up to the largest image in a batch and create a corresponding `pixel_mask`.
MaskFormer addresses semantic segmentation with a mask classification paradigm, thus input segmentation maps
will be converted to lists of binary masks and their respective labels. Let's see an example, assuming
`segmentation_maps = [[2,6,7,9]]`, the output will contain `mask_labels =
[[1,0,0,0],[0,1,0,0],[0,0,1,0],[0,0,0,1]]` (four binary masks) and `class_labels = [2,6,7,9]`, the labels for
each mask.
Args:
pixel_values_list (`List[ImageInput]`):
List of images (pixel values) to be padded. Each image should be a tensor of shape `(channels, height,
width)`.
segmentation_maps (`ImageInput`, *optional*):
The corresponding semantic segmentation maps with the pixel-wise annotations.
(`bool`, *optional*, defaults to `True`):
Whether or not to pad images up to the largest image in a batch and create a pixel mask.
If left to the default, will return a pixel mask that is:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
instance_id_to_semantic_id (`List[Dict[int, int]]` or `Dict[int, int]`, *optional*):
A mapping between object instance ids and class ids. If passed, `segmentation_maps` is treated as an
instance segmentation map where each pixel represents an instance id. Can be provided as a single
dictionary with a global/dataset-level mapping or as a list of dictionaries (one per image), to map
instance ids in each image separately.
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of NumPy arrays. If set to `'pt'`, return PyTorch `torch.Tensor`
objects.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **pixel_values** -- Pixel values to be fed to a model.
- **pixel_mask** -- Pixel mask to be fed to a model (when `=True` or if `pixel_mask` is in
`self.model_input_names`).
- **mask_labels** -- Optional list of mask labels of shape `(labels, height, width)` to be fed to a model
(when `annotations` are provided).
- **class_labels** -- Optional list of class labels of shape `(labels)` to be fed to a model (when
`annotations` are provided). They identify the labels of `mask_labels`, e.g. the label of
`mask_labels[i][j]` if `class_labels[i][j]`.
"""
ignore_index = self.ignore_index if ignore_index is None else ignore_index
do_reduce_labels = self.do_reduce_labels if do_reduce_labels is None else do_reduce_labels
pixel_values_list = [to_numpy_array(pixel_values) for pixel_values in pixel_values_list]
if input_data_format is None:
input_data_format = infer_channel_dimension_format(pixel_values_list[0])
encoded_inputs = self.pad(
pixel_values_list, return_tensors=return_tensors, input_data_format=input_data_format
)
if segmentation_maps is not None:
mask_labels = []
class_labels = []
pad_size = get_max_height_width(pixel_values_list, input_data_format=input_data_format)
# Convert to list of binary masks and labels
for idx, segmentation_map in enumerate(segmentation_maps):
segmentation_map = to_numpy_array(segmentation_map)
if isinstance(instance_id_to_semantic_id, list):
instance_id = instance_id_to_semantic_id[idx]
else:
instance_id = instance_id_to_semantic_id
# Use instance2class_id mapping per image
masks, classes = self.convert_segmentation_map_to_binary_masks(
segmentation_map, instance_id, ignore_index=ignore_index, do_reduce_labels=do_reduce_labels
)
# We add an axis to make them compatible with the transformations library
# this will be removed in the future
if masks.shape[0] > 0:
masks = [mask[None, ...] for mask in masks]
masks = [
self._pad_image(
image=mask,
output_size=pad_size,
constant_values=ignore_index,
input_data_format=ChannelDimension.FIRST,
)
for mask in masks
]
masks = np.concatenate(masks, axis=0)
else:
masks = np.zeros((0, *pad_size), dtype=np.float32)
mask_labels.append(torch.from_numpy(masks))
class_labels.append(torch.from_numpy(classes))
# we cannot batch them since they don't share a common class size
encoded_inputs["mask_labels"] = mask_labels
encoded_inputs["class_labels"] = class_labels
return encoded_inputs
def post_process_segmentation(
self, outputs: "MaskFormerForInstanceSegmentationOutput", target_size: Tuple[int, int] = None
) -> "torch.Tensor":
"""
Converts the output of [`MaskFormerForInstanceSegmentationOutput`] into image segmentation predictions. Only
supports PyTorch.
Args:
outputs ([`MaskFormerForInstanceSegmentationOutput`]):
The outputs from [`MaskFormerForInstanceSegmentation`].
target_size (`Tuple[int, int]`, *optional*):
If set, the `masks_queries_logits` will be resized to `target_size`.
Returns:
`torch.Tensor`:
A tensor of shape (`batch_size, num_class_labels, height, width`).
"""
warnings.warn(
"`post_process_segmentation` is deprecated and will be removed in v5 of Transformers, please use"
" `post_process_instance_segmentation`",
FutureWarning,
)
# class_queries_logits has shape [BATCH, QUERIES, CLASSES + 1]
class_queries_logits = outputs.class_queries_logits
# masks_queries_logits has shape [BATCH, QUERIES, HEIGHT, WIDTH]
masks_queries_logits = outputs.masks_queries_logits
if target_size is not None:
masks_queries_logits = torch.nn.functional.interpolate(
masks_queries_logits,
size=target_size,
mode="bilinear",
align_corners=False,
)
# remove the null class `[..., :-1]`
masks_classes = class_queries_logits.softmax(dim=-1)[..., :-1]
# mask probs has shape [BATCH, QUERIES, HEIGHT, WIDTH]
masks_probs = masks_queries_logits.sigmoid()
# now we want to sum over the queries,
# $ out_{c,h,w} = \sum_q p_{q,c} * m_{q,h,w} $
# where $ softmax(p) \in R^{q, c} $ is the mask classes
# and $ sigmoid(m) \in R^{q, h, w}$ is the mask probabilities
# b(atch)q(uery)c(lasses), b(atch)q(uery)h(eight)w(idth)
segmentation = torch.einsum("bqc, bqhw -> bchw", masks_classes, masks_probs)
return segmentation
def post_process_semantic_segmentation(
self, outputs, target_sizes: Optional[List[Tuple[int, int]]] = None
) -> "torch.Tensor":
"""
Converts the output of [`MaskFormerForInstanceSegmentation`] into semantic segmentation maps. Only supports
PyTorch.
Args:
outputs ([`MaskFormerForInstanceSegmentation`]):
Raw outputs of the model.
target_sizes (`List[Tuple[int, int]]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction. If left to None, predictions will not be resized.
Returns:
`List[torch.Tensor]`:
A list of length `batch_size`, where each item is a semantic segmentation map of shape (height, width)
corresponding to the target_sizes entry (if `target_sizes` is specified). Each entry of each
`torch.Tensor` correspond to a semantic class id.
"""
class_queries_logits = outputs.class_queries_logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.masks_queries_logits # [batch_size, num_queries, height, width]
# Remove the null class `[..., :-1]`
masks_classes = class_queries_logits.softmax(dim=-1)[..., :-1]
masks_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Semantic segmentation logits of shape (batch_size, num_classes, height, width)
segmentation = torch.einsum("bqc, bqhw -> bchw", masks_classes, masks_probs)
batch_size = class_queries_logits.shape[0]
# Resize logits and compute semantic segmentation maps
if target_sizes is not None:
if batch_size != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
semantic_segmentation = []
for idx in range(batch_size):
resized_logits = torch.nn.functional.interpolate(
segmentation[idx].unsqueeze(dim=0), size=target_sizes[idx], mode="bilinear", align_corners=False
)
semantic_map = resized_logits[0].argmax(dim=0)
semantic_segmentation.append(semantic_map)
else:
semantic_segmentation = segmentation.argmax(dim=1)
semantic_segmentation = [semantic_segmentation[i] for i in range(semantic_segmentation.shape[0])]
return semantic_segmentation
def post_process_instance_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
target_sizes: Optional[List[Tuple[int, int]]] = None,
return_coco_annotation: Optional[bool] = False,
return_binary_maps: Optional[bool] = False,
) -> List[Dict]:
"""
Converts the output of [`MaskFormerForInstanceSegmentationOutput`] into instance segmentation predictions. Only
supports PyTorch. If instances could overlap, set either return_coco_annotation or return_binary_maps
to `True` to get the correct segmentation result.
Args:
outputs ([`MaskFormerForInstanceSegmentation`]):
Raw outputs of the model.
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction. If left to None, predictions will not be resized.
return_coco_annotation (`bool`, *optional*, defaults to `False`):
If set to `True`, segmentation maps are returned in COCO run-length encoding (RLE) format.
return_binary_maps (`bool`, *optional*, defaults to `False`):
If set to `True`, segmentation maps are returned as a concatenated tensor of binary segmentation maps
(one per detected instance).
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- A tensor of shape `(height, width)` where each pixel represents a `segment_id`, or
`List[List]` run-length encoding (RLE) of the segmentation map if return_coco_annotation is set to
`True`, or a tensor of shape `(num_instances, height, width)` if return_binary_maps is set to `True`.
Set to `None` if no mask if found above `threshold`.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- An integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
if return_coco_annotation and return_binary_maps:
raise ValueError("return_coco_annotation and return_binary_maps can not be both set to True.")
# [batch_size, num_queries, num_classes+1]
class_queries_logits = outputs.class_queries_logits
# [batch_size, num_queries, height, width]
masks_queries_logits = outputs.masks_queries_logits
device = masks_queries_logits.device
num_classes = class_queries_logits.shape[-1] - 1
num_queries = class_queries_logits.shape[-2]
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(class_queries_logits.shape[0]):
mask_pred = masks_queries_logits[i]
mask_cls = class_queries_logits[i]
scores = torch.nn.functional.softmax(mask_cls, dim=-1)[:, :-1]
labels = torch.arange(num_classes, device=device).unsqueeze(0).repeat(num_queries, 1).flatten(0, 1)
scores_per_image, topk_indices = scores.flatten(0, 1).topk(num_queries, sorted=False)
labels_per_image = labels[topk_indices]
topk_indices = torch.div(topk_indices, num_classes, rounding_mode="floor")
mask_pred = mask_pred[topk_indices]
pred_masks = (mask_pred > 0).float()
# Calculate average mask prob
mask_scores_per_image = (mask_pred.sigmoid().flatten(1) * pred_masks.flatten(1)).sum(1) / (
pred_masks.flatten(1).sum(1) + 1e-6
)
pred_scores = scores_per_image * mask_scores_per_image
pred_classes = labels_per_image
segmentation = torch.zeros(masks_queries_logits.shape[2:]) - 1
if target_sizes is not None:
segmentation = torch.zeros(target_sizes[i]) - 1
pred_masks = torch.nn.functional.interpolate(
pred_masks.unsqueeze(0), size=target_sizes[i], mode="nearest"
)[0]
instance_maps, segments = [], []
current_segment_id = 0
for j in range(num_queries):
score = pred_scores[j].item()
if not torch.all(pred_masks[j] == 0) and score >= threshold:
segmentation[pred_masks[j] == 1] = current_segment_id
segments.append(
{
"id": current_segment_id,
"label_id": pred_classes[j].item(),
"was_fused": False,
"score": round(score, 6),
}
)
current_segment_id += 1
instance_maps.append(pred_masks[j])
# Return segmentation map in run-length encoding (RLE) format
if return_coco_annotation:
segmentation = convert_segmentation_to_rle(segmentation)
# Return a concatenated tensor of binary instance maps
if return_binary_maps and len(instance_maps) != 0:
segmentation = torch.stack(instance_maps, dim=0)
results.append({"segmentation": segmentation, "segments_info": segments})
return results
def post_process_panoptic_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
label_ids_to_fuse: Optional[Set[int]] = None,
target_sizes: Optional[List[Tuple[int, int]]] = None,
) -> List[Dict]:
"""
Converts the output of [`MaskFormerForInstanceSegmentationOutput`] into image panoptic segmentation
predictions. Only supports PyTorch.
Args:
outputs ([`MaskFormerForInstanceSegmentationOutput`]):
The outputs from [`MaskFormerForInstanceSegmentation`].
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
label_ids_to_fuse (`Set[int]`, *optional*):
The labels in this state will have all their instances be fused together. For instance we could say
there can only be one sky in an image, but several persons, so the label ID for sky would be in that
set, but not the one for person.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction in batch. If left to None, predictions will not be
resized.
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- a tensor of shape `(height, width)` where each pixel represents a `segment_id`, set
to `None` if no mask if found above `threshold`. If `target_sizes` is specified, segmentation is resized
to the corresponding `target_sizes` entry.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- an integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **was_fused** -- a boolean, `True` if `label_id` was in `label_ids_to_fuse`, `False` otherwise.
Multiple instances of the same class / label were fused and assigned a single `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
if label_ids_to_fuse is None:
logger.warning("`label_ids_to_fuse` unset. No instance will be fused.")
label_ids_to_fuse = set()
class_queries_logits = outputs.class_queries_logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.masks_queries_logits # [batch_size, num_queries, height, width]
batch_size = class_queries_logits.shape[0]
num_labels = class_queries_logits.shape[-1] - 1
mask_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Predicted label and score of each query (batch_size, num_queries)
pred_scores, pred_labels = nn.functional.softmax(class_queries_logits, dim=-1).max(-1)
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(batch_size):
mask_probs_item, pred_scores_item, pred_labels_item = remove_low_and_no_objects(
mask_probs[i], pred_scores[i], pred_labels[i], threshold, num_labels
)
# No mask found
if mask_probs_item.shape[0] <= 0:
height, width = target_sizes[i] if target_sizes is not None else mask_probs_item.shape[1:]
segmentation = torch.zeros((height, width)) - 1
results.append({"segmentation": segmentation, "segments_info": []})
continue
# Get segmentation map and segment information of batch item
target_size = target_sizes[i] if target_sizes is not None else None
segmentation, segments = compute_segments(
mask_probs=mask_probs_item,
pred_scores=pred_scores_item,
pred_labels=pred_labels_item,
mask_threshold=mask_threshold,
overlap_mask_area_threshold=overlap_mask_area_threshold,
label_ids_to_fuse=label_ids_to_fuse,
target_size=target_size,
)
results.append({"segmentation": segmentation, "segments_info": segments})
return results | class_definition | 12,543 | 58,148 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/image_processing_maskformer.py | null | 4,223 |
class DetrDecoderOutput(BaseModelOutputWithCrossAttentions):
"""
Base class for outputs of the DETR decoder. This class adds one attribute to BaseModelOutputWithCrossAttentions,
namely an optional stack of intermediate decoder activations, i.e. the output of each decoder layer, each of them
gone through a layernorm. This is useful when training the model with auxiliary decoding losses.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder's cross-attention layer, after the attention softmax,
used to compute the weighted average in the cross-attention heads.
intermediate_hidden_states (`torch.FloatTensor` of shape `(config.decoder_layers, batch_size, num_queries, hidden_size)`, *optional*, returned when `config.auxiliary_loss=True`):
Intermediate decoder activations, i.e. the output of each decoder layer, each of them gone through a
layernorm.
"""
intermediate_hidden_states: Optional[torch.FloatTensor] = None | class_definition | 2,046 | 4,419 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,224 |
class MaskFormerPixelLevelModuleOutput(ModelOutput):
"""
MaskFormer's pixel level module output. It returns both the last and (optionally) the hidden states from the
`encoder` and `decoder`. By default, the `encoder` is a MaskFormerSwin Transformer and the `decoder` is a Feature
Pyramid Network (FPN).
The `encoder_last_hidden_state` are referred on the paper as **images features**, while `decoder_last_hidden_state`
as **pixel embeddings**
Args:
encoder_last_hidden_state (`torch.FloatTensor` of shape`(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the encoder.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the model at
the output of each stage.
decoder_last_hidden_state (`torch.FloatTensor` of shape`(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the decoder.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the model at
the output of each stage.
"""
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
decoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 4,433 | 6,466 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,225 |
class MaskFormerPixelDecoderOutput(ModelOutput):
"""
MaskFormer's pixel decoder module output, practically a Feature Pyramid Network. It returns the last hidden state
and (optionally) the hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, num_channels, height, width)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights from Detr's decoder after the attention softmax, used to compute the
weighted average in the self-attention heads.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 6,480 | 7,951 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,226 |
class MaskFormerModelOutput(ModelOutput):
"""
Class for outputs of [`MaskFormerModel`]. This class returns all the needed hidden states to compute the logits.
Args:
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the encoder model (backbone).
pixel_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the pixel decoder model (FPN).
transformer_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Last hidden states (final feature map) of the last stage of the transformer decoder model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the encoder
model at the output of each stage.
pixel_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the pixel
decoder model at the output of each stage.
transformer_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states (also called feature maps) of the
transformer decoder at the output of each stage.
hidden_states `tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` containing `encoder_hidden_states`, `pixel_decoder_hidden_states` and
`decoder_hidden_states`
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights from Detr's decoder after the attention softmax, used to compute the
weighted average in the self-attention heads.
"""
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
pixel_decoder_last_hidden_state: Optional[torch.FloatTensor] = None
transformer_decoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
pixel_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
transformer_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 7,965 | 11,502 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,227 |
class MaskFormerForInstanceSegmentationOutput(ModelOutput):
"""
Class for outputs of [`MaskFormerForInstanceSegmentation`].
This output can be directly passed to [`~MaskFormerImageProcessor.post_process_semantic_segmentation`] or or
[`~MaskFormerImageProcessor.post_process_instance_segmentation`] or
[`~MaskFormerImageProcessor.post_process_panoptic_segmentation`] depending on the task. Please, see
[`~MaskFormerImageProcessor] for details regarding usage.
Args:
loss (`torch.Tensor`, *optional*):
The computed loss, returned when labels are present.
class_queries_logits (`torch.FloatTensor`):
A tensor of shape `(batch_size, num_queries, num_labels + 1)` representing the proposed classes for each
query. Note the `+ 1` is needed because we incorporate the null class.
masks_queries_logits (`torch.FloatTensor`):
A tensor of shape `(batch_size, num_queries, height, width)` representing the proposed masks for each
query.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the encoder model (backbone).
pixel_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the pixel decoder model (FPN).
transformer_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Last hidden states (final feature map) of the last stage of the transformer decoder model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the encoder
model at the output of each stage.
pixel_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the pixel
decoder model at the output of each stage.
transformer_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the transformer decoder at the output
of each stage.
hidden_states `tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` containing `encoder_hidden_states`, `pixel_decoder_hidden_states` and
`decoder_hidden_states`.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights from Detr's decoder after the attention softmax, used to compute the
weighted average in the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
class_queries_logits: torch.FloatTensor = None
masks_queries_logits: torch.FloatTensor = None
auxiliary_logits: torch.FloatTensor = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
pixel_decoder_last_hidden_state: Optional[torch.FloatTensor] = None
transformer_decoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
pixel_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
transformer_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None | class_definition | 11,516 | 16,083 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,228 |
class DetrAttention(nn.Module):
"""
Multi-headed attention from 'Attention Is All You Need' paper.
Here, we add position embeddings to the queries and keys (as explained in the DETR paper).
"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if self.head_dim * num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, batch_size: int):
return tensor.view(batch_size, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def with_pos_embed(self, tensor: torch.Tensor, object_queries: Optional[Tensor]):
return tensor if object_queries is None else tensor + object_queries
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
object_queries: Optional[torch.Tensor] = None,
key_value_states: Optional[torch.Tensor] = None,
spatial_position_embeddings: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size, target_len, embed_dim = hidden_states.size()
# add position embeddings to the hidden states before projecting to queries and keys
if object_queries is not None:
hidden_states_original = hidden_states
hidden_states = self.with_pos_embed(hidden_states, object_queries)
# add key-value position embeddings to the key value states
if spatial_position_embeddings is not None:
key_value_states_original = key_value_states
key_value_states = self.with_pos_embed(key_value_states, spatial_position_embeddings)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, batch_size)
value_states = self._shape(self.v_proj(key_value_states_original), -1, batch_size)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, batch_size)
value_states = self._shape(self.v_proj(hidden_states_original), -1, batch_size)
proj_shape = (batch_size * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, target_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
source_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (batch_size * self.num_heads, target_len, source_len):
raise ValueError(
f"Attention weights should be of size {(batch_size * self.num_heads, target_len, source_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (batch_size, 1, target_len, source_len):
raise ValueError(
f"Attention mask should be of size {(batch_size, 1, target_len, source_len)}, but is"
f" {attention_mask.size()}"
)
attn_weights = attn_weights.view(batch_size, self.num_heads, target_len, source_len) + attention_mask
attn_weights = attn_weights.view(batch_size * self.num_heads, target_len, source_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(batch_size, self.num_heads, target_len, source_len)
attn_weights = attn_weights_reshaped.view(batch_size * self.num_heads, target_len, source_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (batch_size * self.num_heads, target_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(batch_size, self.num_heads, target_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(batch_size, self.num_heads, target_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(batch_size, target_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped | class_definition | 22,232 | 28,107 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,229 |
class DetrDecoderLayer(nn.Module):
def __init__(self, config: DetrConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = DetrAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.encoder_attn = DetrAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
object_queries: Optional[torch.Tensor] = None,
query_position_embeddings: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
):
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, target_len, source_len)` where padding elements are indicated by very large negative
values.
object_queries (`torch.FloatTensor`, *optional*):
object_queries that are added to the hidden states
in the cross-attention layer.
query_position_embeddings (`torch.FloatTensor`, *optional*):
position embeddings that are added to the queries and keys
in the self-attention layer.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(batch, seq_len, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, target_len, source_len)` where padding elements are indicated by very large negative
values.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
hidden_states, self_attn_weights = self.self_attn(
hidden_states=hidden_states,
object_queries=query_position_embeddings,
attention_mask=attention_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
hidden_states, cross_attn_weights = self.encoder_attn(
hidden_states=hidden_states,
object_queries=query_position_embeddings,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
spatial_position_embeddings=object_queries,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs | class_definition | 28,180 | 32,884 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,230 |
class DetrDecoder(nn.Module):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`DetrDecoderLayer`].
The decoder updates the query embeddings through multiple self-attention and cross-attention layers.
Some small tweaks for DETR:
- object_queries and query_position_embeddings are added to the forward pass.
- if self.config.auxiliary_loss is set to True, also returns a stack of activations from all decoding layers.
Args:
config: DetrConfig
"""
def __init__(self, config: DetrConfig):
super().__init__()
self.config = config
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.layers = nn.ModuleList([DetrDecoderLayer(config) for _ in range(config.decoder_layers)])
# in DETR, the decoder uses layernorm after the last decoder layer output
self.layernorm = nn.LayerNorm(config.d_model)
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
object_queries=None,
query_position_embeddings=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
The query embeddings that are passed into the decoder.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on certain queries. Mask values selected in `[0, 1]`:
- 1 for queries that are **not masked**,
- 0 for queries that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding pixel_values of the encoder. Mask values selected
in `[0, 1]`:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
object_queries (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Position embeddings that are added to the queries and keys in each cross-attention layer.
query_position_embeddings (`torch.FloatTensor` of shape `(batch_size, num_queries, hidden_size)`):
, *optional*): Position embeddings that are added to the queries and keys in each self-attention layer.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if inputs_embeds is not None:
hidden_states = inputs_embeds
input_shape = inputs_embeds.size()[:-1]
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _prepare_4d_attention_mask(
encoder_attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1]
)
# optional intermediate hidden states
intermediate = () if self.config.auxiliary_loss else None
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop:
continue
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
decoder_layer.__call__,
hidden_states,
None,
encoder_hidden_states,
encoder_attention_mask,
None,
output_attentions,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=None,
object_queries=object_queries,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if self.config.auxiliary_loss:
hidden_states = self.layernorm(hidden_states)
intermediate += (hidden_states,)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# finally, apply layernorm
hidden_states = self.layernorm(hidden_states)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
# stack intermediate decoder activations
if self.config.auxiliary_loss:
intermediate = torch.stack(intermediate)
if not return_dict:
return tuple(
v
for v in [hidden_states, all_hidden_states, all_self_attns, all_cross_attentions, intermediate]
if v is not None
)
return DetrDecoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
intermediate_hidden_states=intermediate,
) | class_definition | 32,887 | 40,297 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,231 |
class MaskFormerHungarianMatcher(nn.Module):
"""This class computes an assignment between the labels and the predictions of the network.
For efficiency reasons, the labels don't include the no_object. Because of this, in general, there are more
predictions than labels. In this case, we do a 1-to-1 matching of the best predictions, while the others are
un-matched (and thus treated as non-objects).
"""
def __init__(self, cost_class: float = 1.0, cost_mask: float = 1.0, cost_dice: float = 1.0):
"""Creates the matcher
Params:
cost_class (float, *optional*, defaults to 1.0):
This is the relative weight of the classification error in the matching cost.
cost_mask (float, *optional*, defaults to 1.0):
This is the relative weight of the focal loss of the binary mask in the matching cost.
cost_dice (float, *optional*, defaults to 1.0):
This is the relative weight of the dice loss of the binary mask in the matching cost
"""
super().__init__()
if cost_class == 0 and cost_mask == 0 and cost_dice == 0:
raise ValueError("All costs cant be 0")
self.cost_class = cost_class
self.cost_mask = cost_mask
self.cost_dice = cost_dice
@torch.no_grad()
def forward(self, masks_queries_logits, class_queries_logits, mask_labels, class_labels) -> List[Tuple[Tensor]]:
"""Performs the matching
Params:
masks_queries_logits (`torch.Tensor`):
A tensor` of dim `batch_size, num_queries, num_labels` with the
classification logits.
class_queries_logits (`torch.Tensor`):
A tensor` of dim `batch_size, num_queries, height, width` with the
predicted masks.
class_labels (`torch.Tensor`):
A tensor` of dim `num_target_boxes` (where num_target_boxes is the number
of ground-truth objects in the target) containing the class labels.
mask_labels (`torch.Tensor`):
A tensor` of dim `num_target_boxes, height, width` containing the target
masks.
Returns:
`List[Tuple[Tensor]]`: A list of size batch_size, containing tuples of (index_i, index_j) where:
- index_i is the indices of the selected predictions (in order)
- index_j is the indices of the corresponding selected labels (in order)
For each batch element, it holds:
len(index_i) = len(index_j) = min(num_queries, num_target_boxes).
"""
indices: List[Tuple[np.array]] = []
preds_masks = masks_queries_logits
preds_probs = class_queries_logits
# iterate through batch size
for pred_probs, pred_mask, target_mask, labels in zip(preds_probs, preds_masks, mask_labels, class_labels):
# downsample the target mask, save memory
target_mask = nn.functional.interpolate(target_mask[:, None], size=pred_mask.shape[-2:], mode="nearest")
pred_probs = pred_probs.softmax(-1)
# Compute the classification cost. Contrary to the loss, we don't use the NLL,
# but approximate it in 1 - proba[target class].
# The 1 is a constant that doesn't change the matching, it can be ommitted.
cost_class = -pred_probs[:, labels]
# flatten spatial dimension "q h w -> q (h w)"
pred_mask_flat = pred_mask.flatten(1) # [num_queries, height*width]
# same for target_mask "c h w -> c (h w)"
target_mask_flat = target_mask[:, 0].flatten(1) # [num_total_labels, height*width]
# compute the focal loss between each mask pairs -> shape (num_queries, num_labels)
cost_mask = pair_wise_sigmoid_focal_loss(pred_mask_flat, target_mask_flat)
# Compute the dice loss betwen each mask pairs -> shape (num_queries, num_labels)
cost_dice = pair_wise_dice_loss(pred_mask_flat, target_mask_flat)
# final cost matrix
cost_matrix = self.cost_mask * cost_mask + self.cost_class * cost_class + self.cost_dice * cost_dice
# do the assigmented using the hungarian algorithm in scipy
assigned_indices: Tuple[np.array] = linear_sum_assignment(cost_matrix.cpu())
indices.append(assigned_indices)
# It could be stacked in one tensor
matched_indices = [
(torch.as_tensor(i, dtype=torch.int64), torch.as_tensor(j, dtype=torch.int64)) for i, j in indices
]
return matched_indices
def __repr__(self):
head = "Matcher " + self.__class__.__name__
body = [
f"cost_class: {self.cost_class}",
f"cost_mask: {self.cost_mask}",
f"cost_dice: {self.cost_dice}",
]
_repr_indent = 4
lines = [head] + [" " * _repr_indent + line for line in body]
return "\n".join(lines) | class_definition | 40,342 | 45,375 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,232 |
class MaskFormerLoss(nn.Module):
def __init__(
self,
num_labels: int,
matcher: MaskFormerHungarianMatcher,
weight_dict: Dict[str, float],
eos_coef: float,
):
"""
The MaskFormer Loss. The loss is computed very similar to DETR. The process happens in two steps: 1) we compute
hungarian assignment between ground truth masks and the outputs of the model 2) we supervise each pair of
matched ground-truth / prediction (supervise class and mask)
Args:
num_labels (`int`):
The number of classes.
matcher (`MaskFormerHungarianMatcher`):
A torch module that computes the assigments between the predictions and labels.
weight_dict (`Dict[str, float]`):
A dictionary of weights to be applied to the different losses.
eos_coef (`float`):
Weight to apply to the null class.
"""
super().__init__()
requires_backends(self, ["scipy"])
self.num_labels = num_labels
self.matcher = matcher
self.weight_dict = weight_dict
self.eos_coef = eos_coef
empty_weight = torch.ones(self.num_labels + 1)
empty_weight[-1] = self.eos_coef
self.register_buffer("empty_weight", empty_weight)
def _max_by_axis(self, the_list: List[List[int]]) -> List[int]:
maxes = the_list[0]
for sublist in the_list[1:]:
for index, item in enumerate(sublist):
maxes[index] = max(maxes[index], item)
return maxes
def _pad_images_to_max_in_batch(self, tensors: List[Tensor]) -> Tuple[Tensor, Tensor]:
# get the maximum size in the batch
max_size = self._max_by_axis([list(tensor.shape) for tensor in tensors])
batch_size = len(tensors)
# compute finel size
batch_shape = [batch_size] + max_size
b, _, h, w = batch_shape
# get metadata
dtype = tensors[0].dtype
device = tensors[0].device
padded_tensors = torch.zeros(batch_shape, dtype=dtype, device=device)
padding_masks = torch.ones((b, h, w), dtype=torch.bool, device=device)
# pad the tensors to the size of the biggest one
for tensor, padded_tensor, padding_mask in zip(tensors, padded_tensors, padding_masks):
padded_tensor[: tensor.shape[0], : tensor.shape[1], : tensor.shape[2]].copy_(tensor)
padding_mask[: tensor.shape[1], : tensor.shape[2]] = False
return padded_tensors, padding_masks
def loss_labels(
self, class_queries_logits: Tensor, class_labels: List[Tensor], indices: Tuple[np.array]
) -> Dict[str, Tensor]:
"""Compute the losses related to the labels using cross entropy.
Args:
class_queries_logits (`torch.Tensor`):
A tensor of shape `batch_size, num_queries, num_labels`
class_labels (`List[torch.Tensor]`):
List of class labels of shape `(labels)`.
indices (`Tuple[np.array])`:
The indices computed by the Hungarian matcher.
Returns:
`Dict[str, Tensor]`: A dict of `torch.Tensor` containing the following key:
- **loss_cross_entropy** -- The loss computed using cross entropy on the predicted and ground truth labels.
"""
pred_logits = class_queries_logits
batch_size, num_queries, _ = pred_logits.shape
criterion = nn.CrossEntropyLoss(weight=self.empty_weight)
idx = self._get_predictions_permutation_indices(indices)
# shape = (batch_size, num_queries)
target_classes_o = torch.cat([target[j] for target, (_, j) in zip(class_labels, indices)])
# shape = (batch_size, num_queries)
target_classes = torch.full(
(batch_size, num_queries), fill_value=self.num_labels, dtype=torch.int64, device=pred_logits.device
)
target_classes[idx] = target_classes_o
# target_classes is a (batch_size, num_labels, num_queries), we need to permute pred_logits "b q c -> b c q"
pred_logits_transposed = pred_logits.transpose(1, 2)
loss_ce = criterion(pred_logits_transposed, target_classes)
losses = {"loss_cross_entropy": loss_ce}
return losses
def loss_masks(
self, masks_queries_logits: Tensor, mask_labels: List[Tensor], indices: Tuple[np.array], num_masks: int
) -> Dict[str, Tensor]:
"""Compute the losses related to the masks using focal and dice loss.
Args:
masks_queries_logits (`torch.Tensor`):
A tensor of shape `batch_size, num_queries, height, width`
mask_labels (`torch.Tensor`):
List of mask labels of shape `(labels, height, width)`.
indices (`Tuple[np.array])`:
The indices computed by the Hungarian matcher.
num_masks (`int)`:
The number of masks, used for normalization.
Returns:
`Dict[str, Tensor]`: A dict of `torch.Tensor` containing two keys:
- **loss_mask** -- The loss computed using sigmoid focal loss on the predicted and ground truth masks.
- **loss_dice** -- The loss computed using dice loss on the predicted on the predicted and ground truth
masks.
"""
src_idx = self._get_predictions_permutation_indices(indices)
tgt_idx = self._get_targets_permutation_indices(indices)
# shape (batch_size * num_queries, height, width)
pred_masks = masks_queries_logits[src_idx]
# shape (batch_size, num_queries, height, width)
# pad all and stack the targets to the num_labels dimension
target_masks, _ = self._pad_images_to_max_in_batch(mask_labels)
target_masks = target_masks[tgt_idx]
# upsample predictions to the target size, we have to add one dim to use interpolate
pred_masks = nn.functional.interpolate(
pred_masks[:, None], size=target_masks.shape[-2:], mode="bilinear", align_corners=False
)
pred_masks = pred_masks[:, 0].flatten(1)
target_masks = target_masks.flatten(1)
losses = {
"loss_mask": sigmoid_focal_loss(pred_masks, target_masks, num_masks),
"loss_dice": dice_loss(pred_masks, target_masks, num_masks),
}
return losses
def _get_predictions_permutation_indices(self, indices):
# permute predictions following indices
batch_indices = torch.cat([torch.full_like(src, i) for i, (src, _) in enumerate(indices)])
predictions_indices = torch.cat([src for (src, _) in indices])
return batch_indices, predictions_indices
def _get_targets_permutation_indices(self, indices):
# permute labels following indices
batch_indices = torch.cat([torch.full_like(tgt, i) for i, (_, tgt) in enumerate(indices)])
target_indices = torch.cat([tgt for (_, tgt) in indices])
return batch_indices, target_indices
def forward(
self,
masks_queries_logits: Tensor,
class_queries_logits: Tensor,
mask_labels: List[Tensor],
class_labels: List[Tensor],
auxiliary_predictions: Optional[Dict[str, Tensor]] = None,
) -> Dict[str, Tensor]:
"""
This performs the loss computation.
Args:
masks_queries_logits (`torch.Tensor`):
A tensor of shape `batch_size, num_queries, height, width`
class_queries_logits (`torch.Tensor`):
A tensor of shape `batch_size, num_queries, num_labels`
mask_labels (`torch.Tensor`):
List of mask labels of shape `(labels, height, width)`.
class_labels (`List[torch.Tensor]`):
List of class labels of shape `(labels)`.
auxiliary_predictions (`Dict[str, torch.Tensor]`, *optional*):
if `use_auxiliary_loss` was set to `true` in [`MaskFormerConfig`], then it contains the logits from the
inner layers of the Detr's Decoder.
Returns:
`Dict[str, Tensor]`: A dict of `torch.Tensor` containing two keys:
- **loss_cross_entropy** -- The loss computed using cross entropy on the predicted and ground truth labels.
- **loss_mask** -- The loss computed using sigmoid focal loss on the predicted and ground truth masks.
- **loss_dice** -- The loss computed using dice loss on the predicted on the predicted and ground truth
masks.
if `use_auxiliary_loss` was set to `true` in [`MaskFormerConfig`], the dictionary contains addional losses
for each auxiliary predictions.
"""
# retrieve the matching between the outputs of the last layer and the labels
indices = self.matcher(masks_queries_logits, class_queries_logits, mask_labels, class_labels)
# compute the average number of target masks for normalization purposes
num_masks: Number = self.get_num_masks(class_labels, device=class_labels[0].device)
# get all the losses
losses: Dict[str, Tensor] = {
**self.loss_masks(masks_queries_logits, mask_labels, indices, num_masks),
**self.loss_labels(class_queries_logits, class_labels, indices),
}
# in case of auxiliary losses, we repeat this process with the output of each intermediate layer.
if auxiliary_predictions is not None:
for idx, aux_outputs in enumerate(auxiliary_predictions):
masks_queries_logits = aux_outputs["masks_queries_logits"]
class_queries_logits = aux_outputs["class_queries_logits"]
loss_dict = self.forward(masks_queries_logits, class_queries_logits, mask_labels, class_labels)
loss_dict = {f"{key}_{idx}": value for key, value in loss_dict.items()}
losses.update(loss_dict)
return losses
def get_num_masks(self, class_labels: torch.Tensor, device: torch.device) -> torch.Tensor:
"""
Computes the average number of target masks across the batch, for normalization purposes.
"""
num_masks = sum([len(classes) for classes in class_labels])
num_masks = torch.as_tensor(num_masks, dtype=torch.float, device=device)
world_size = 1
if is_accelerate_available():
if PartialState._shared_state != {}:
num_masks = reduce(num_masks)
world_size = PartialState().num_processes
num_masks = torch.clamp(num_masks / world_size, min=1)
return num_masks | class_definition | 45,428 | 56,093 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,233 |
class MaskFormerFPNConvLayer(nn.Module):
def __init__(self, in_features: int, out_features: int, kernel_size: int = 3, padding: int = 1):
"""
A basic module that executes conv - norm - in sequence used in MaskFormer.
Args:
in_features (`int`):
The number of input features (channels).
out_features (`int`):
The number of outputs features (channels).
"""
super().__init__()
self.layers = [
nn.Conv2d(in_features, out_features, kernel_size=kernel_size, padding=padding, bias=False),
nn.GroupNorm(32, out_features),
nn.ReLU(inplace=True),
]
for i, layer in enumerate(self.layers):
# Provide backwards compatibility from when the class inherited from nn.Sequential
# In nn.Sequential subclasses, the name given to the layer is its index in the sequence.
# In nn.Module subclasses they derived from the instance attribute they are assigned to e.g.
# self.my_layer_name = Layer()
# We can't give instance attributes integer names i.e. self.0 is not permitted and so need to register
# explicitly
self.add_module(str(i), layer)
def forward(self, input: Tensor) -> Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state | class_definition | 56,096 | 57,548 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,234 |
class MaskFormerFPNLayer(nn.Module):
def __init__(self, in_features: int, lateral_features: int):
"""
A Feature Pyramid Network Layer (FPN) layer. It creates a feature map by aggregating features from the previous
and backbone layer. Due to the spatial mismatch, the tensor coming from the previous layer is upsampled.
Args:
in_features (`int`):
The number of input features (channels).
lateral_features (`int`):
The number of lateral features (channels).
"""
super().__init__()
self.proj = nn.Sequential(
nn.Conv2d(lateral_features, in_features, kernel_size=1, padding=0, bias=False),
nn.GroupNorm(32, in_features),
)
self.block = MaskFormerFPNConvLayer(in_features, in_features)
def forward(self, down: Tensor, left: Tensor) -> Tensor:
left = self.proj(left)
down = nn.functional.interpolate(down, size=left.shape[-2:], mode="nearest")
down += left
down = self.block(down)
return down | class_definition | 57,551 | 58,640 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,235 |
class MaskFormerFPNModel(nn.Module):
def __init__(self, in_features: int, lateral_widths: List[int], feature_size: int = 256):
"""
Feature Pyramid Network, given an input tensor and a set of feature map of different feature/spatial size, it
creates a list of feature maps with the same feature size.
Args:
in_features (`int`):
The number of input features (channels).
lateral_widths (`List[int]`):
A list with the features (channels) size of each lateral connection.
feature_size (int, *optional*, defaults to 256):
The features (channels) of the resulting feature maps.
"""
super().__init__()
self.stem = MaskFormerFPNConvLayer(in_features, feature_size)
self.layers = nn.Sequential(
*[MaskFormerFPNLayer(feature_size, lateral_width) for lateral_width in lateral_widths[::-1]]
)
def forward(self, features: List[Tensor]) -> List[Tensor]:
fpn_features = []
last_feature = features[-1]
other_features = features[:-1]
output = self.stem(last_feature)
for layer, left in zip(self.layers, other_features[::-1]):
output = layer(output, left)
fpn_features.append(output)
return fpn_features | class_definition | 58,643 | 59,977 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,236 |
class MaskFormerPixelDecoder(nn.Module):
def __init__(self, *args, feature_size: int = 256, mask_feature_size: int = 256, **kwargs):
r"""
Pixel Decoder Module proposed in [Per-Pixel Classification is Not All You Need for Semantic
Segmentation](https://arxiv.org/abs/2107.06278). It first runs the backbone's features into a Feature Pyramid
Network creating a list of feature maps. Then, it projects the last one to the correct `mask_size`.
Args:
feature_size (`int`, *optional*, defaults to 256):
The feature size (channel dimension) of the FPN feature maps.
mask_feature_size (`int`, *optional*, defaults to 256):
The features (channels) of the target masks size \\(C_{\epsilon}\\) in the paper.
"""
super().__init__()
self.fpn = MaskFormerFPNModel(*args, feature_size=feature_size, **kwargs)
self.mask_projection = nn.Conv2d(feature_size, mask_feature_size, kernel_size=3, padding=1)
def forward(
self, features: List[Tensor], output_hidden_states: bool = False, return_dict: bool = True
) -> MaskFormerPixelDecoderOutput:
fpn_features = self.fpn(features)
# we use the last feature map
last_feature_projected = self.mask_projection(fpn_features[-1])
if not return_dict:
return (last_feature_projected, tuple(fpn_features)) if output_hidden_states else (last_feature_projected,)
return MaskFormerPixelDecoderOutput(
last_hidden_state=last_feature_projected, hidden_states=tuple(fpn_features) if output_hidden_states else ()
) | class_definition | 59,980 | 61,632 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,237 |
class MaskFormerSinePositionEmbedding(nn.Module):
"""
This is a more standard version of the position embedding, very similar to the one used by the Attention is all you
need paper, generalized to work on images.
"""
def __init__(
self, num_pos_feats: int = 64, temperature: int = 10000, normalize: bool = False, scale: Optional[float] = None
):
super().__init__()
if scale is not None and normalize is False:
raise ValueError("normalize should be True if scale is passed")
self.num_pos_feats = num_pos_feats
self.temperature = temperature
self.normalize = normalize
self.scale = 2 * math.pi if scale is None else scale
def forward(self, x: Tensor, mask: Optional[Tensor] = None) -> Tensor:
if mask is None:
mask = torch.zeros((x.size(0), x.size(2), x.size(3)), device=x.device, dtype=torch.bool)
not_mask = (~mask).to(x.dtype)
y_embed = not_mask.cumsum(1)
x_embed = not_mask.cumsum(2)
if self.normalize:
eps = 1e-6
y_embed = y_embed / (y_embed[:, -1:, :] + eps) * self.scale
x_embed = x_embed / (x_embed[:, :, -1:] + eps) * self.scale
dim_t = torch.arange(self.num_pos_feats, dtype=torch.int64, device=x.device).type_as(x)
dim_t = self.temperature ** (2 * torch.div(dim_t, 2, rounding_mode="floor") / self.num_pos_feats)
pos_x = x_embed[:, :, :, None] / dim_t
pos_y = y_embed[:, :, :, None] / dim_t
pos_x = torch.stack((pos_x[:, :, :, 0::2].sin(), pos_x[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos_y = torch.stack((pos_y[:, :, :, 0::2].sin(), pos_y[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos = torch.cat((pos_y, pos_x), dim=3).permute(0, 3, 1, 2)
return pos | class_definition | 61,738 | 63,551 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,238 |
class PredictionBlock(nn.Module):
def __init__(self, in_dim: int, out_dim: int, activation: nn.Module) -> None:
super().__init__()
self.layers = [nn.Linear(in_dim, out_dim), activation]
# Maintain submodule indexing as if part of a Sequential block
for i, layer in enumerate(self.layers):
self.add_module(str(i), layer)
def forward(self, input: Tensor) -> Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state | class_definition | 63,554 | 64,108 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,239 |
class MaskformerMLPPredictionHead(nn.Module):
def __init__(self, input_dim: int, hidden_dim: int, output_dim: int, num_layers: int = 3):
"""
A classic Multi Layer Perceptron (MLP).
Args:
input_dim (`int`):
The input dimensions.
hidden_dim (`int`):
The hidden dimensions.
output_dim (`int`):
The output dimensions.
num_layers (int, *optional*, defaults to 3):
The number of layers.
"""
super().__init__()
in_dims = [input_dim] + [hidden_dim] * (num_layers - 1)
out_dims = [hidden_dim] * (num_layers - 1) + [output_dim]
self.layers = []
for i, (in_dim, out_dim) in enumerate(zip(in_dims, out_dims)):
activation = nn.ReLU() if i < num_layers - 1 else nn.Identity()
layer = PredictionBlock(in_dim, out_dim, activation=activation)
self.layers.append(layer)
# Provide backwards compatibility from when the class inherited from nn.Sequential
# In nn.Sequential subclasses, the name given to the layer is its index in the sequence.
# In nn.Module subclasses they derived from the instance attribute they are assigned to e.g.
# self.my_layer_name = Layer()
# We can't give instance attributes integer names i.e. self.0 is not permitted and so need to register
# explicitly
self.add_module(str(i), layer)
def forward(self, input: Tensor) -> Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state | class_definition | 64,111 | 65,802 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,240 |
class MaskFormerPixelLevelModule(nn.Module):
def __init__(self, config: MaskFormerConfig):
"""
Pixel Level Module proposed in [Per-Pixel Classification is Not All You Need for Semantic
Segmentation](https://arxiv.org/abs/2107.06278). It runs the input image through a backbone and a pixel
decoder, generating an image feature map and pixel embeddings.
Args:
config ([`MaskFormerConfig`]):
The configuration used to instantiate this model.
"""
super().__init__()
if getattr(config, "backbone_config") is not None and config.backbone_config.model_type == "swin":
# for backwards compatibility
backbone_config = config.backbone_config
backbone_config = MaskFormerSwinConfig.from_dict(backbone_config.to_dict())
backbone_config.out_features = ["stage1", "stage2", "stage3", "stage4"]
config.backbone_config = backbone_config
self.encoder = load_backbone(config)
feature_channels = self.encoder.channels
self.decoder = MaskFormerPixelDecoder(
in_features=feature_channels[-1],
feature_size=config.fpn_feature_size,
mask_feature_size=config.mask_feature_size,
lateral_widths=feature_channels[:-1],
)
def forward(
self, pixel_values: Tensor, output_hidden_states: bool = False, return_dict: bool = True
) -> MaskFormerPixelLevelModuleOutput:
features = self.encoder(pixel_values).feature_maps
decoder_output = self.decoder(features, output_hidden_states, return_dict=return_dict)
if not return_dict:
last_hidden_state = decoder_output[0]
outputs = (features[-1], last_hidden_state)
if output_hidden_states:
hidden_states = decoder_output[1]
outputs = outputs + (tuple(features),) + (hidden_states,)
return outputs
return MaskFormerPixelLevelModuleOutput(
# the last feature is actually the output from the last layer
encoder_last_hidden_state=features[-1],
decoder_last_hidden_state=decoder_output.last_hidden_state,
encoder_hidden_states=tuple(features) if output_hidden_states else (),
decoder_hidden_states=decoder_output.hidden_states if output_hidden_states else (),
) | class_definition | 65,805 | 68,208 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,241 |
class MaskFormerTransformerModule(nn.Module):
"""
The MaskFormer's transformer module.
"""
def __init__(self, in_features: int, config: MaskFormerConfig):
super().__init__()
hidden_size = config.decoder_config.hidden_size
should_project = in_features != hidden_size
self.position_embedder = MaskFormerSinePositionEmbedding(num_pos_feats=hidden_size // 2, normalize=True)
self.queries_embedder = nn.Embedding(config.decoder_config.num_queries, hidden_size)
self.input_projection = nn.Conv2d(in_features, hidden_size, kernel_size=1) if should_project else None
self.decoder = DetrDecoder(config=config.decoder_config)
def forward(
self,
image_features: Tensor,
output_hidden_states: bool = False,
output_attentions: bool = False,
return_dict: Optional[bool] = None,
) -> DetrDecoderOutput:
if self.input_projection is not None:
image_features = self.input_projection(image_features)
object_queries = self.position_embedder(image_features)
# repeat the queries "q c -> b q c"
batch_size = image_features.shape[0]
queries_embeddings = self.queries_embedder.weight.unsqueeze(0).repeat(batch_size, 1, 1)
inputs_embeds = torch.zeros_like(queries_embeddings, requires_grad=True)
batch_size, num_channels, height, width = image_features.shape
# rearrange both image_features and object_queries "b c h w -> b (h w) c"
image_features = image_features.view(batch_size, num_channels, height * width).permute(0, 2, 1)
object_queries = object_queries.view(batch_size, num_channels, height * width).permute(0, 2, 1)
decoder_output: DetrDecoderOutput = self.decoder(
inputs_embeds=inputs_embeds,
attention_mask=None,
encoder_hidden_states=image_features,
encoder_attention_mask=None,
object_queries=object_queries,
query_position_embeddings=queries_embeddings,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return decoder_output | class_definition | 68,211 | 70,431 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,242 |
class MaskFormerPreTrainedModel(PreTrainedModel):
config_class = MaskFormerConfig
base_model_prefix = "model"
main_input_name = "pixel_values"
def _init_weights(self, module: nn.Module):
xavier_std = self.config.init_xavier_std
std = self.config.init_std
if isinstance(module, MaskFormerTransformerModule):
if module.input_projection is not None:
nn.init.xavier_uniform_(module.input_projection.weight, gain=xavier_std)
nn.init.constant_(module.input_projection.bias, 0)
# FPN
elif isinstance(module, MaskFormerFPNModel):
nn.init.xavier_uniform_(module.stem.get_submodule("0").weight, gain=xavier_std)
elif isinstance(module, MaskFormerFPNLayer):
nn.init.xavier_uniform_(module.proj[0].weight, gain=xavier_std)
elif isinstance(module, MaskFormerFPNConvLayer):
nn.init.xavier_uniform_(module.get_submodule("0").weight, gain=xavier_std)
# The MLP head
elif isinstance(module, MaskformerMLPPredictionHead):
# I was not able to find the correct initializer in the original implementation
# we'll use xavier
for submodule in module.modules():
if isinstance(submodule, nn.Linear):
nn.init.xavier_uniform_(submodule.weight, gain=xavier_std)
nn.init.constant_(submodule.bias, 0)
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
# copied from DETR
if isinstance(module, (nn.Linear, nn.Conv2d, nn.BatchNorm2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_() | class_definition | 72,227 | 74,400 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,243 |
class MaskFormerModel(MaskFormerPreTrainedModel):
def __init__(self, config: MaskFormerConfig):
super().__init__(config)
self.pixel_level_module = MaskFormerPixelLevelModule(config)
self.transformer_module = MaskFormerTransformerModule(
in_features=self.pixel_level_module.encoder.channels[-1], config=config
)
self.post_init()
@add_start_docstrings_to_model_forward(MASKFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=MaskFormerModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Tensor,
pixel_mask: Optional[Tensor] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> MaskFormerModelOutput:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, MaskFormerModel
>>> from PIL import Image
>>> import requests
>>> # load MaskFormer fine-tuned on ADE20k semantic segmentation
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/maskformer-swin-base-ade")
>>> model = MaskFormerModel.from_pretrained("facebook/maskformer-swin-base-ade")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(image, return_tensors="pt")
>>> # forward pass
>>> outputs = model(**inputs)
>>> # the decoder of MaskFormer outputs hidden states of shape (batch_size, num_queries, hidden_size)
>>> transformer_decoder_last_hidden_state = outputs.transformer_decoder_last_hidden_state
>>> list(transformer_decoder_last_hidden_state.shape)
[1, 100, 256]
```"""
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
batch_size, _, height, width = pixel_values.shape
if pixel_mask is None:
pixel_mask = torch.ones((batch_size, height, width), device=pixel_values.device)
pixel_level_module_output = self.pixel_level_module(
pixel_values, output_hidden_states, return_dict=return_dict
)
image_features = pixel_level_module_output[0]
pixel_embeddings = pixel_level_module_output[1]
transformer_module_output = self.transformer_module(image_features, output_hidden_states, output_attentions)
queries = transformer_module_output.last_hidden_state
encoder_hidden_states = None
pixel_decoder_hidden_states = None
transformer_decoder_hidden_states = None
hidden_states = None
if output_hidden_states:
encoder_hidden_states = pixel_level_module_output[2]
pixel_decoder_hidden_states = pixel_level_module_output[3]
transformer_decoder_hidden_states = transformer_module_output[1]
hidden_states = encoder_hidden_states + pixel_decoder_hidden_states + transformer_decoder_hidden_states
output = MaskFormerModelOutput(
encoder_last_hidden_state=image_features,
pixel_decoder_last_hidden_state=pixel_embeddings,
transformer_decoder_last_hidden_state=queries,
encoder_hidden_states=encoder_hidden_states,
pixel_decoder_hidden_states=pixel_decoder_hidden_states,
transformer_decoder_hidden_states=transformer_decoder_hidden_states,
hidden_states=hidden_states,
attentions=transformer_module_output.attentions,
)
if not return_dict:
output = tuple(v for v in output.values())
return output | class_definition | 74,556 | 78,685 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,244 |
class MaskFormerForInstanceSegmentation(MaskFormerPreTrainedModel):
def __init__(self, config: MaskFormerConfig):
super().__init__(config)
self.model = MaskFormerModel(config)
hidden_size = config.decoder_config.hidden_size
# + 1 because we add the "null" class
self.class_predictor = nn.Linear(hidden_size, config.num_labels + 1)
self.mask_embedder = MaskformerMLPPredictionHead(hidden_size, hidden_size, config.mask_feature_size)
self.matcher = MaskFormerHungarianMatcher(
cost_class=1.0, cost_dice=config.dice_weight, cost_mask=config.mask_weight
)
self.weight_dict: Dict[str, float] = {
"loss_cross_entropy": config.cross_entropy_weight,
"loss_mask": config.mask_weight,
"loss_dice": config.dice_weight,
}
self.criterion = MaskFormerLoss(
config.num_labels,
matcher=self.matcher,
weight_dict=self.weight_dict,
eos_coef=config.no_object_weight,
)
self.post_init()
def get_loss_dict(
self,
masks_queries_logits: Tensor,
class_queries_logits: Tensor,
mask_labels: Tensor,
class_labels: Tensor,
auxiliary_logits: Dict[str, Tensor],
) -> Dict[str, Tensor]:
loss_dict: Dict[str, Tensor] = self.criterion(
masks_queries_logits, class_queries_logits, mask_labels, class_labels, auxiliary_logits
)
# weight each loss by `self.weight_dict[<LOSS_NAME>]` including auxiliary losses
for key, weight in self.weight_dict.items():
for loss_key, loss in loss_dict.items():
if key in loss_key:
loss *= weight
return loss_dict
def get_loss(self, loss_dict: Dict[str, Tensor]) -> Tensor:
return sum(loss_dict.values())
def get_logits(self, outputs: MaskFormerModelOutput) -> Tuple[Tensor, Tensor, Dict[str, Tensor]]:
pixel_embeddings = outputs.pixel_decoder_last_hidden_state
# get the auxiliary predictions (one for each decoder's layer)
auxiliary_logits: List[str, Tensor] = []
is_tracing = torch.jit.is_tracing() or isinstance(outputs, torch.fx.Proxy) or is_torchdynamo_compiling()
# This code is a little bit cumbersome, an improvement can be to return a list of predictions. If we have auxiliary loss then we are going to return more than one element in the list
if self.config.use_auxiliary_loss:
stacked_transformer_decoder_outputs = torch.stack(outputs.transformer_decoder_hidden_states)
classes = self.class_predictor(stacked_transformer_decoder_outputs)
class_queries_logits = classes[-1]
# get the masks
mask_embeddings = self.mask_embedder(stacked_transformer_decoder_outputs)
if is_tracing and not is_torch_greater_or_equal_than_2_1:
# Equivalent to einsum('lbqc, bchw -> lbqhw') but jit friendly
num_embeddings, batch_size, num_queries, num_channels = mask_embeddings.shape
_, _, height, width = pixel_embeddings.shape
binaries_masks = torch.zeros(
(num_embeddings, batch_size, num_queries, height, width), device=mask_embeddings.device
)
for c in range(num_channels):
binaries_masks += mask_embeddings[..., c][..., None, None] * pixel_embeddings[None, :, None, c]
else:
binaries_masks = torch.einsum("lbqc, bchw -> lbqhw", mask_embeddings, pixel_embeddings)
masks_queries_logits = binaries_masks[-1]
# go til [:-1] because the last one is always used
for aux_binary_masks, aux_classes in zip(binaries_masks[:-1], classes[:-1]):
auxiliary_logits.append(
{"masks_queries_logits": aux_binary_masks, "class_queries_logits": aux_classes}
)
else:
transformer_decoder_hidden_states = outputs.transformer_decoder_last_hidden_state
classes = self.class_predictor(transformer_decoder_hidden_states)
class_queries_logits = classes
# get the masks
mask_embeddings = self.mask_embedder(transformer_decoder_hidden_states)
# sum up over the channels
if is_tracing and not is_torch_greater_or_equal_than_2_1:
# Equivalent to einsum('bqc, bchw -> bqhw') but jit friendly
batch_size, num_queries, num_channels = mask_embeddings.shape
_, _, height, width = pixel_embeddings.shape
masks_queries_logits = torch.zeros(
(batch_size, num_queries, height, width), device=mask_embeddings.device
)
for c in range(num_channels):
masks_queries_logits += mask_embeddings[..., c][..., None, None] * pixel_embeddings[:, None, c]
else:
masks_queries_logits = torch.einsum("bqc, bchw -> bqhw", mask_embeddings, pixel_embeddings)
return class_queries_logits, masks_queries_logits, auxiliary_logits
@add_start_docstrings_to_model_forward(MASKFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=MaskFormerForInstanceSegmentationOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Tensor,
mask_labels: Optional[List[Tensor]] = None,
class_labels: Optional[List[Tensor]] = None,
pixel_mask: Optional[Tensor] = None,
output_auxiliary_logits: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> MaskFormerForInstanceSegmentationOutput:
r"""
mask_labels (`List[torch.Tensor]`, *optional*):
List of mask labels of shape `(num_labels, height, width)` to be fed to a model
class_labels (`List[torch.LongTensor]`, *optional*):
list of target class labels of shape `(num_labels, height, width)` to be fed to a model. They identify the
labels of `mask_labels`, e.g. the label of `mask_labels[i][j]` if `class_labels[i][j]`.
Returns:
Examples:
Semantic segmentation example:
```python
>>> from transformers import AutoImageProcessor, MaskFormerForInstanceSegmentation
>>> from PIL import Image
>>> import requests
>>> # load MaskFormer fine-tuned on ADE20k semantic segmentation
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/maskformer-swin-base-ade")
>>> model = MaskFormerForInstanceSegmentation.from_pretrained("facebook/maskformer-swin-base-ade")
>>> url = (
... "https://huggingface.co/datasets/hf-internal-testing/fixtures_ade20k/resolve/main/ADE_val_00000001.jpg"
... )
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # model predicts class_queries_logits of shape `(batch_size, num_queries)`
>>> # and masks_queries_logits of shape `(batch_size, num_queries, height, width)`
>>> class_queries_logits = outputs.class_queries_logits
>>> masks_queries_logits = outputs.masks_queries_logits
>>> # you can pass them to image_processor for postprocessing
>>> predicted_semantic_map = image_processor.post_process_semantic_segmentation(
... outputs, target_sizes=[(image.height, image.width)]
... )[0]
>>> # we refer to the demo notebooks for visualization (see "Resources" section in the MaskFormer docs)
>>> list(predicted_semantic_map.shape)
[512, 683]
```
Panoptic segmentation example:
```python
>>> from transformers import AutoImageProcessor, MaskFormerForInstanceSegmentation
>>> from PIL import Image
>>> import requests
>>> # load MaskFormer fine-tuned on COCO panoptic segmentation
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/maskformer-swin-base-coco")
>>> model = MaskFormerForInstanceSegmentation.from_pretrained("facebook/maskformer-swin-base-coco")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # model predicts class_queries_logits of shape `(batch_size, num_queries)`
>>> # and masks_queries_logits of shape `(batch_size, num_queries, height, width)`
>>> class_queries_logits = outputs.class_queries_logits
>>> masks_queries_logits = outputs.masks_queries_logits
>>> # you can pass them to image_processor for postprocessing
>>> result = image_processor.post_process_panoptic_segmentation(outputs, target_sizes=[(image.height, image.width)])[0]
>>> # we refer to the demo notebooks for visualization (see "Resources" section in the MaskFormer docs)
>>> predicted_panoptic_map = result["segmentation"]
>>> list(predicted_panoptic_map.shape)
[480, 640]
```
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
raw_outputs = self.model(
pixel_values,
pixel_mask,
output_hidden_states=output_hidden_states or self.config.use_auxiliary_loss,
return_dict=return_dict,
output_attentions=output_attentions,
)
# We need to have raw_outputs optionally be returned as a dict to use torch.compile. For backwards
# compatibility we convert to a dataclass for the rest of the model logic
outputs = MaskFormerModelOutput(
encoder_last_hidden_state=raw_outputs[0],
pixel_decoder_last_hidden_state=raw_outputs[1],
transformer_decoder_last_hidden_state=raw_outputs[2],
encoder_hidden_states=raw_outputs[3] if output_hidden_states else None,
pixel_decoder_hidden_states=raw_outputs[4] if output_hidden_states else None,
transformer_decoder_hidden_states=raw_outputs[5] if output_hidden_states else None,
hidden_states=raw_outputs[6] if output_hidden_states else None,
attentions=raw_outputs[-1] if output_attentions else None,
)
loss, loss_dict, auxiliary_logits = None, None, None
class_queries_logits, masks_queries_logits, auxiliary_logits = self.get_logits(outputs)
if mask_labels is not None and class_labels is not None:
loss_dict: Dict[str, Tensor] = self.get_loss_dict(
masks_queries_logits, class_queries_logits, mask_labels, class_labels, auxiliary_logits
)
loss = self.get_loss(loss_dict)
output_auxiliary_logits = (
self.config.output_auxiliary_logits if output_auxiliary_logits is None else output_auxiliary_logits
)
if not output_auxiliary_logits:
auxiliary_logits = None
if not return_dict:
output = tuple(
v
for v in (loss, class_queries_logits, masks_queries_logits, auxiliary_logits, *outputs.values())
if v is not None
)
return output
return MaskFormerForInstanceSegmentationOutput(
loss=loss,
**outputs,
class_queries_logits=class_queries_logits,
masks_queries_logits=masks_queries_logits,
auxiliary_logits=auxiliary_logits,
) | class_definition | 78,688 | 90,773 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/modeling_maskformer.py | null | 4,245 |
class MaskFormerConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`MaskFormerModel`]. It is used to instantiate a
MaskFormer model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the MaskFormer
[facebook/maskformer-swin-base-ade](https://huggingface.co/facebook/maskformer-swin-base-ade) architecture trained
on [ADE20k-150](https://huggingface.co/datasets/scene_parse_150).
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Currently, MaskFormer only supports the [Swin Transformer](swin) as backbone.
Args:
mask_feature_size (`int`, *optional*, defaults to 256):
The masks' features size, this value will also be used to specify the Feature Pyramid Network features'
size.
no_object_weight (`float`, *optional*, defaults to 0.1):
Weight to apply to the null (no object) class.
use_auxiliary_loss(`bool`, *optional*, defaults to `False`):
If `True` [`MaskFormerForInstanceSegmentationOutput`] will contain the auxiliary losses computed using the
logits from each decoder's stage.
backbone_config (`Dict`, *optional*):
The configuration passed to the backbone, if unset, the configuration corresponding to
`swin-base-patch4-window12-384` will be used.
backbone (`str`, *optional*):
Name of backbone to use when `backbone_config` is `None`. If `use_pretrained_backbone` is `True`, this
will load the corresponding pretrained weights from the timm or transformers library. If `use_pretrained_backbone`
is `False`, this loads the backbone's config and uses that to initialize the backbone with random weights.
use_pretrained_backbone (`bool`, *optional*, `False`):
Whether to use pretrained weights for the backbone.
use_timm_backbone (`bool`, *optional*, `False`):
Whether to load `backbone` from the timm library. If `False`, the backbone is loaded from the transformers
library.
backbone_kwargs (`dict`, *optional*):
Keyword arguments to be passed to AutoBackbone when loading from a checkpoint
e.g. `{'out_indices': (0, 1, 2, 3)}`. Cannot be specified if `backbone_config` is set.
decoder_config (`Dict`, *optional*):
The configuration passed to the transformer decoder model, if unset the base config for `detr-resnet-50`
will be used.
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
init_xavier_std (`float`, *optional*, defaults to 1):
The scaling factor used for the Xavier initialization gain in the HM Attention map module.
dice_weight (`float`, *optional*, defaults to 1.0):
The weight for the dice loss.
cross_entropy_weight (`float`, *optional*, defaults to 1.0):
The weight for the cross entropy loss.
mask_weight (`float`, *optional*, defaults to 20.0):
The weight for the mask loss.
output_auxiliary_logits (`bool`, *optional*):
Should the model output its `auxiliary_logits` or not.
Raises:
`ValueError`:
Raised if the backbone model type selected is not in `["swin"]` or the decoder model type selected is not
in `["detr"]`
Examples:
```python
>>> from transformers import MaskFormerConfig, MaskFormerModel
>>> # Initializing a MaskFormer facebook/maskformer-swin-base-ade configuration
>>> configuration = MaskFormerConfig()
>>> # Initializing a model (with random weights) from the facebook/maskformer-swin-base-ade style configuration
>>> model = MaskFormerModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```
"""
model_type = "maskformer"
attribute_map = {"hidden_size": "mask_feature_size"}
backbones_supported = ["resnet", "swin"]
decoders_supported = ["detr"]
def __init__(
self,
fpn_feature_size: int = 256,
mask_feature_size: int = 256,
no_object_weight: float = 0.1,
use_auxiliary_loss: bool = False,
backbone_config: Optional[Dict] = None,
decoder_config: Optional[Dict] = None,
init_std: float = 0.02,
init_xavier_std: float = 1.0,
dice_weight: float = 1.0,
cross_entropy_weight: float = 1.0,
mask_weight: float = 20.0,
output_auxiliary_logits: Optional[bool] = None,
backbone: Optional[str] = None,
use_pretrained_backbone: bool = False,
use_timm_backbone: bool = False,
backbone_kwargs: Optional[Dict] = None,
**kwargs,
):
if backbone_config is None and backbone is None:
# fall back to https://huggingface.co/microsoft/swin-base-patch4-window12-384-in22k
backbone_config = SwinConfig(
image_size=384,
num_channels=3,
patch_size=4,
embed_dim=128,
depths=[2, 2, 18, 2],
num_heads=[4, 8, 16, 32],
window_size=12,
drop_path_rate=0.3,
out_features=["stage1", "stage2", "stage3", "stage4"],
)
elif isinstance(backbone_config, dict):
backbone_model_type = backbone_config.pop("model_type")
config_class = CONFIG_MAPPING[backbone_model_type]
backbone_config = config_class.from_dict(backbone_config)
verify_backbone_config_arguments(
use_timm_backbone=use_timm_backbone,
use_pretrained_backbone=use_pretrained_backbone,
backbone=backbone,
backbone_config=backbone_config,
backbone_kwargs=backbone_kwargs,
)
# verify that the backbone is supported
if backbone_config is not None and backbone_config.model_type not in self.backbones_supported:
logger.warning_once(
f"Backbone {backbone_config.model_type} is not a supported model and may not be compatible with MaskFormer. "
f"Supported model types: {','.join(self.backbones_supported)}"
)
if decoder_config is None:
# fall back to https://huggingface.co/facebook/detr-resnet-50
decoder_config = DetrConfig()
else:
# verify that the decoder is supported
decoder_type = (
decoder_config.pop("model_type") if isinstance(decoder_config, dict) else decoder_config.model_type
)
if decoder_type not in self.decoders_supported:
raise ValueError(
f"Transformer Decoder {decoder_type} not supported, please use one of"
f" {','.join(self.decoders_supported)}"
)
if isinstance(decoder_config, dict):
config_class = CONFIG_MAPPING[decoder_type]
decoder_config = config_class.from_dict(decoder_config)
self.backbone_config = backbone_config
self.decoder_config = decoder_config
# main feature dimension for the model
self.fpn_feature_size = fpn_feature_size
self.mask_feature_size = mask_feature_size
# initializer
self.init_std = init_std
self.init_xavier_std = init_xavier_std
# Hungarian matcher && loss
self.cross_entropy_weight = cross_entropy_weight
self.dice_weight = dice_weight
self.mask_weight = mask_weight
self.use_auxiliary_loss = use_auxiliary_loss
self.no_object_weight = no_object_weight
self.output_auxiliary_logits = output_auxiliary_logits
self.num_attention_heads = self.decoder_config.encoder_attention_heads
self.num_hidden_layers = self.decoder_config.num_hidden_layers
self.backbone = backbone
self.use_pretrained_backbone = use_pretrained_backbone
self.use_timm_backbone = use_timm_backbone
self.backbone_kwargs = backbone_kwargs
super().__init__(**kwargs)
@classmethod
def from_backbone_and_decoder_configs(
cls, backbone_config: PretrainedConfig, decoder_config: PretrainedConfig, **kwargs
):
"""Instantiate a [`MaskFormerConfig`] (or a derived class) from a pre-trained backbone model configuration and DETR model
configuration.
Args:
backbone_config ([`PretrainedConfig`]):
The backbone configuration.
decoder_config ([`PretrainedConfig`]):
The transformer decoder configuration to use.
Returns:
[`MaskFormerConfig`]: An instance of a configuration object
"""
return cls(
backbone_config=backbone_config,
decoder_config=decoder_config,
**kwargs,
) | class_definition | 1,009 | 10,259 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/maskformer/configuration_maskformer.py | null | 4,246 |
class XPathEmbeddings(nn.Module):
"""Construct the embeddings from xpath tags and subscripts.
We drop tree-id in this version, as its info can be covered by xpath.
"""
def __init__(self, config):
super(XPathEmbeddings, self).__init__()
self.max_depth = config.max_depth
self.xpath_unitseq2_embeddings = nn.Linear(config.xpath_unit_hidden_size * self.max_depth, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.activation = nn.ReLU()
self.xpath_unitseq2_inner = nn.Linear(config.xpath_unit_hidden_size * self.max_depth, 4 * config.hidden_size)
self.inner2emb = nn.Linear(4 * config.hidden_size, config.hidden_size)
self.xpath_tag_sub_embeddings = nn.ModuleList(
[
nn.Embedding(config.max_xpath_tag_unit_embeddings, config.xpath_unit_hidden_size)
for _ in range(self.max_depth)
]
)
self.xpath_subs_sub_embeddings = nn.ModuleList(
[
nn.Embedding(config.max_xpath_subs_unit_embeddings, config.xpath_unit_hidden_size)
for _ in range(self.max_depth)
]
)
def forward(self, xpath_tags_seq=None, xpath_subs_seq=None):
xpath_tags_embeddings = []
xpath_subs_embeddings = []
for i in range(self.max_depth):
xpath_tags_embeddings.append(self.xpath_tag_sub_embeddings[i](xpath_tags_seq[:, :, i]))
xpath_subs_embeddings.append(self.xpath_subs_sub_embeddings[i](xpath_subs_seq[:, :, i]))
xpath_tags_embeddings = torch.cat(xpath_tags_embeddings, dim=-1)
xpath_subs_embeddings = torch.cat(xpath_subs_embeddings, dim=-1)
xpath_embeddings = xpath_tags_embeddings + xpath_subs_embeddings
xpath_embeddings = self.inner2emb(self.dropout(self.activation(self.xpath_unitseq2_inner(xpath_embeddings))))
return xpath_embeddings | class_definition | 1,622 | 3,573 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,247 |
class MarkupLMEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super(MarkupLMEmbeddings, self).__init__()
self.config = config
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.max_depth = config.max_depth
self.xpath_embeddings = XPathEmbeddings(config)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaEmbeddings.create_position_ids_from_inputs_embeds
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
token_type_ids=None,
position_ids=None,
inputs_embeds=None,
past_key_values_length=0,
):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# prepare xpath seq
if xpath_tags_seq is None:
xpath_tags_seq = self.config.tag_pad_id * torch.ones(
tuple(list(input_shape) + [self.max_depth]), dtype=torch.long, device=device
)
if xpath_subs_seq is None:
xpath_subs_seq = self.config.subs_pad_id * torch.ones(
tuple(list(input_shape) + [self.max_depth]), dtype=torch.long, device=device
)
words_embeddings = inputs_embeds
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
xpath_embeddings = self.xpath_embeddings(xpath_tags_seq, xpath_subs_seq)
embeddings = words_embeddings + position_embeddings + token_type_embeddings + xpath_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings | class_definition | 4,343 | 8,244 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,248 |
class MarkupLMSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states | class_definition | 8,335 | 8,945 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,249 |
class MarkupLMIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states | class_definition | 9,018 | 9,587 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,250 |
class MarkupLMOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states | class_definition | 9,674 | 10,286 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,251 |
class MarkupLMPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output | class_definition | 10,353 | 10,916 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,252 |
class MarkupLMPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states | class_definition | 11,020 | 11,724 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,253 |
class MarkupLMLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = MarkupLMPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def _tie_weights(self):
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states | class_definition | 11,821 | 12,661 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,254 |
class MarkupLMOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MarkupLMLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores | class_definition | 12,753 | 13,075 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,255 |
class MarkupLMSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
use_cache = past_key_value is not None
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
query_length, key_length = query_layer.shape[2], key_layer.shape[2]
if use_cache:
position_ids_l = torch.tensor(key_length - 1, dtype=torch.long, device=hidden_states.device).view(
-1, 1
)
else:
position_ids_l = torch.arange(query_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(key_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in MarkupLMModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs | class_definition | 13,169 | 20,519 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,256 |
class MarkupLMAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = MARKUPLM_SELF_ATTENTION_CLASSES[config._attn_implementation](
config, position_embedding_type=position_embedding_type
)
self.output = MarkupLMSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs | class_definition | 20,700 | 22,834 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,257 |
class MarkupLMLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = MarkupLMAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = MarkupLMAttention(config, position_embedding_type="absolute")
self.intermediate = MarkupLMIntermediate(config)
self.output = MarkupLMOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output | class_definition | 22,920 | 26,847 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,258 |
class MarkupLMEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([MarkupLMLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
) | class_definition | 26,935 | 30,733 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,259 |
class MarkupLMPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MarkupLMConfig
base_model_prefix = "markuplm"
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights with Bert->MarkupLM
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Optional[Union[str, os.PathLike]], *model_args, **kwargs):
return super(MarkupLMPreTrainedModel, cls).from_pretrained(
pretrained_model_name_or_path, *model_args, **kwargs
) | class_definition | 30,736 | 32,200 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,260 |
class MarkupLMModel(MarkupLMPreTrainedModel):
# Copied from transformers.models.clap.modeling_clap.ClapTextModel.__init__ with ClapText->MarkupLM
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = MarkupLMEmbeddings(config)
self.encoder = MarkupLMEncoder(config)
self.pooler = MarkupLMPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BaseModelOutputWithPoolingAndCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
xpath_tags_seq: Optional[torch.LongTensor] = None,
xpath_subs_seq: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, MarkupLMModel
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base")
>>> model = MarkupLMModel.from_pretrained("microsoft/markuplm-base")
>>> html_string = "<html> <head> <title>Page Title</title> </head> </html>"
>>> encoding = processor(html_string, return_tensors="pt")
>>> outputs = model(**encoding)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 4, 768]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
extended_attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
extended_attention_mask = extended_attention_mask.to(dtype=self.dtype)
extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0
if head_mask is not None:
if head_mask.dim() == 1:
head_mask = head_mask.unsqueeze(0).unsqueeze(0).unsqueeze(-1).unsqueeze(-1)
head_mask = head_mask.expand(self.config.num_hidden_layers, -1, -1, -1, -1)
elif head_mask.dim() == 2:
head_mask = head_mask.unsqueeze(1).unsqueeze(-1).unsqueeze(-1)
head_mask = head_mask.to(dtype=next(self.parameters()).dtype)
else:
head_mask = [None] * self.config.num_hidden_layers
embedding_output = self.embeddings(
input_ids=input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
)
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertModel._reorder_cache
def _reorder_cache(self, past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past),
)
return reordered_past | class_definition | 35,995 | 42,099 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,261 |
class MarkupLMForQuestionAnswering(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertForQuestionAnswering.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.markuplm = MarkupLMModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=QuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
xpath_tags_seq: Optional[torch.Tensor] = None,
xpath_subs_seq: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
start_positions: Optional[torch.Tensor] = None,
end_positions: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, MarkupLMForQuestionAnswering
>>> import torch
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base-finetuned-websrc")
>>> model = MarkupLMForQuestionAnswering.from_pretrained("microsoft/markuplm-base-finetuned-websrc")
>>> html_string = "<html> <head> <title>My name is Niels</title> </head> </html>"
>>> question = "What's his name?"
>>> encoding = processor(html_string, questions=question, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_tokens = encoding.input_ids[0, answer_start_index : answer_end_index + 1]
>>> processor.decode(predict_answer_tokens).strip()
'Niels'
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions.clamp_(0, ignored_index)
end_positions.clamp_(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
) | class_definition | 42,394 | 47,821 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,262 |
class MarkupLMForTokenClassification(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertForTokenClassification.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.markuplm = MarkupLMModel(config, add_pooling_layer=False)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
xpath_tags_seq: Optional[torch.Tensor] = None,
xpath_subs_seq: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AutoModelForTokenClassification
>>> import torch
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base")
>>> processor.parse_html = False
>>> model = AutoModelForTokenClassification.from_pretrained("microsoft/markuplm-base", num_labels=7)
>>> nodes = ["hello", "world"]
>>> xpaths = ["/html/body/div/li[1]/div/span", "/html/body/div/li[1]/div/span"]
>>> node_labels = [1, 2]
>>> encoding = processor(nodes=nodes, xpaths=xpaths, node_labels=node_labels, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.classifier(sequence_output) # (batch_size, seq_length, node_type_size)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(
prediction_scores.view(-1, self.config.num_labels),
labels.view(-1),
)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
) | class_definition | 47,937 | 51,951 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,263 |
class MarkupLMForSequenceClassification(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertForSequenceClassification.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.markuplm = MarkupLMModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
xpath_tags_seq: Optional[torch.Tensor] = None,
xpath_subs_seq: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AutoModelForSequenceClassification
>>> import torch
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base")
>>> model = AutoModelForSequenceClassification.from_pretrained("microsoft/markuplm-base", num_labels=7)
>>> html_string = "<html> <head> <title>Page Title</title> </head> </html>"
>>> encoding = processor(html_string, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
) | class_definition | 52,181 | 57,126 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/modeling_markuplm.py | null | 4,264 |
class MarkupLMTokenizer(PreTrainedTokenizer):
r"""
Construct a MarkupLM tokenizer. Based on byte-level Byte-Pair-Encoding (BPE). [`MarkupLMTokenizer`] can be used to
turn HTML strings into to token-level `input_ids`, `attention_mask`, `token_type_ids`, `xpath_tags_seq` and
`xpath_tags_seq`. This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods.
Users should refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
errors (`str`, *optional*, defaults to `"replace"`):
Paradigm to follow when decoding bytes to UTF-8. See
[bytes.decode](https://docs.python.org/3/library/stdtypes.html#bytes.decode) for more information.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
add_prefix_space (`bool`, *optional*, defaults to `False`):
Whether or not to add an initial space to the input. This allows to treat the leading word just as any
other word. (RoBERTa tokenizer detect beginning of words by the preceding space).
"""
vocab_files_names = VOCAB_FILES_NAMES
def __init__(
self,
vocab_file,
merges_file,
tags_dict,
errors="replace",
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
add_prefix_space=False,
max_depth=50,
max_width=1000,
pad_width=1001,
pad_token_label=-100,
only_label_first_subword=True,
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.tags_dict = tags_dict
self.decoder = {v: k for k, v in self.encoder.items()}
self.errors = errors # how to handle errors in decoding
self.byte_encoder = bytes_to_unicode()
self.byte_decoder = {v: k for k, v in self.byte_encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
bpe_merges = merges_handle.read().split("\n")[1:-1]
bpe_merges = [tuple(merge.split()) for merge in bpe_merges]
self.bpe_ranks = dict(zip(bpe_merges, range(len(bpe_merges))))
self.cache = {}
self.add_prefix_space = add_prefix_space
# Should have added re.IGNORECASE so BPE merges can happen for capitalized versions of contractions
self.pat = re.compile(r"""'s|'t|'re|'ve|'m|'ll|'d| ?\p{L}+| ?\p{N}+| ?[^\s\p{L}\p{N}]+|\s+(?!\S)|\s+""")
# additional properties
self.max_depth = max_depth
self.max_width = max_width
self.pad_width = pad_width
self.unk_tag_id = len(self.tags_dict)
self.pad_tag_id = self.unk_tag_id + 1
self.pad_xpath_tags_seq = [self.pad_tag_id] * self.max_depth
self.pad_xpath_subs_seq = [self.pad_width] * self.max_depth
super().__init__(
vocab_file=vocab_file,
merges_file=merges_file,
tags_dict=tags_dict,
errors=errors,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
add_prefix_space=add_prefix_space,
max_depth=max_depth,
max_width=max_width,
pad_width=pad_width,
pad_token_label=pad_token_label,
only_label_first_subword=only_label_first_subword,
**kwargs,
)
self.pad_token_label = pad_token_label
self.only_label_first_subword = only_label_first_subword
def get_xpath_seq(self, xpath):
"""
Given the xpath expression of one particular node (like "/html/body/div/li[1]/div/span[2]"), return a list of
tag IDs and corresponding subscripts, taking into account max depth.
"""
xpath_tags_list = []
xpath_subs_list = []
xpath_units = xpath.split("/")
for unit in xpath_units:
if not unit.strip():
continue
name_subs = unit.strip().split("[")
tag_name = name_subs[0]
sub = 0 if len(name_subs) == 1 else int(name_subs[1][:-1])
xpath_tags_list.append(self.tags_dict.get(tag_name, self.unk_tag_id))
xpath_subs_list.append(min(self.max_width, sub))
xpath_tags_list = xpath_tags_list[: self.max_depth]
xpath_subs_list = xpath_subs_list[: self.max_depth]
xpath_tags_list += [self.pad_tag_id] * (self.max_depth - len(xpath_tags_list))
xpath_subs_list += [self.pad_width] * (self.max_depth - len(xpath_subs_list))
return xpath_tags_list, xpath_subs_list
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
vocab = self.encoder.copy()
vocab.update(self.added_tokens_encoder)
return vocab
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
bpe_tokens = []
for token in re.findall(self.pat, text):
token = "".join(
self.byte_encoder[b] for b in token.encode("utf-8")
) # Maps all our bytes to unicode strings, avoiding control tokens of the BPE (spaces in our case)
bpe_tokens.extend(bpe_token for bpe_token in self.bpe(token).split(" "))
return bpe_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
logger.warning(
"MarkupLM now does not support generative tasks, decoding is experimental and subject to change."
)
text = "".join(tokens)
text = bytearray([self.byte_decoder[c] for c in text]).decode("utf-8", errors=self.errors)
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
# save vocab_file
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
# save merge_file
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
def prepare_for_tokenization(self, text, is_split_into_words=False, **kwargs):
add_prefix_space = kwargs.pop("add_prefix_space", self.add_prefix_space)
if (is_split_into_words or add_prefix_space) and (len(text) > 0 and not text[0].isspace()):
text = " " + text
return (text, kwargs)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A RoBERTa sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def build_xpath_tags_with_special_tokens(
self, xpath_tags_0: List[int], xpath_tags_1: Optional[List[int]] = None
) -> List[int]:
pad = [self.pad_xpath_tags_seq]
if len(xpath_tags_1) == 0:
return pad + xpath_tags_0 + pad
return pad + xpath_tags_0 + pad + xpath_tags_1 + pad
def build_xpath_subs_with_special_tokens(
self, xpath_subs_0: List[int], xpath_subs_1: Optional[List[int]] = None
) -> List[int]:
pad = [self.pad_xpath_subs_seq]
if len(xpath_subs_1) == 0:
return pad + xpath_subs_0 + pad
return pad + xpath_subs_0 + pad + xpath_subs_1 + pad
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Args:
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. RoBERTa does not
make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + token_ids_1 + sep) * [0]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
text: Union[TextInput, PreTokenizedInput, List[TextInput], List[PreTokenizedInput]],
text_pair: Optional[Union[PreTokenizedInput, List[PreTokenizedInput]]] = None,
xpaths: Union[List[List[int]], List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences with node-level xpaths and optional labels.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string, a list of strings
(nodes of a single example or questions of a batch of examples) or a list of list of strings (batch of
nodes).
text_pair (`List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence should be a list of strings
(pretokenized string).
xpaths (`List[List[int]]`, `List[List[List[int]]]`):
Node-level xpaths.
node_labels (`List[int]`, `List[List[int]]`, *optional*):
Node-level integer labels (for token classification tasks).
"""
# Input type checking for clearer error
def _is_valid_text_input(t):
if isinstance(t, str):
# Strings are fine
return True
elif isinstance(t, (list, tuple)):
# List are fine as long as they are...
if len(t) == 0:
# ... empty
return True
elif isinstance(t[0], str):
# ... list of strings
return True
elif isinstance(t[0], (list, tuple)):
# ... list with an empty list or with a list of strings
return len(t[0]) == 0 or isinstance(t[0][0], str)
else:
return False
else:
return False
if text_pair is not None:
# in case text + text_pair are provided, text = questions, text_pair = nodes
if not _is_valid_text_input(text):
raise ValueError("text input must of type `str` (single example) or `List[str]` (batch of examples). ")
if not isinstance(text_pair, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
else:
# in case only text is provided => must be nodes
if not isinstance(text, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
if text_pair is not None:
is_batched = isinstance(text, (list, tuple))
else:
is_batched = isinstance(text, (list, tuple)) and text and isinstance(text[0], (list, tuple))
nodes = text if text_pair is None else text_pair
assert xpaths is not None, "You must provide corresponding xpaths"
if is_batched:
assert len(nodes) == len(xpaths), "You must provide nodes and xpaths for an equal amount of examples"
for nodes_example, xpaths_example in zip(nodes, xpaths):
assert len(nodes_example) == len(xpaths_example), "You must provide as many nodes as there are xpaths"
else:
assert len(nodes) == len(xpaths), "You must provide as many nodes as there are xpaths"
if is_batched:
if text_pair is not None and len(text) != len(text_pair):
raise ValueError(
f"batch length of `text`: {len(text)} does not match batch length of `text_pair`:"
f" {len(text_pair)}."
)
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
is_pair = bool(text_pair is not None)
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[List[List[int]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
batch_outputs = self._batch_prepare_for_model(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=return_tensors,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def _batch_prepare_for_model(
self,
batch_text_or_text_pairs,
is_pair: bool = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[List[int]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
"""
Prepares a sequence of input id, or a pair of sequences of inputs ids so that it can be used by the model. It
adds special tokens, truncates sequences if overflowing while taking into account the special tokens and
manages a moving window (with user defined stride) for overflowing tokens.
Args:
batch_ids_pairs: list of tokenized input ids or input ids pairs
"""
batch_outputs = {}
for idx, example in enumerate(zip(batch_text_or_text_pairs, xpaths)):
batch_text_or_text_pair, xpaths_example = example
outputs = self.prepare_for_model(
batch_text_or_text_pair[0] if is_pair else batch_text_or_text_pair,
batch_text_or_text_pair[1] if is_pair else None,
xpaths_example,
node_labels=node_labels[idx] if node_labels is not None else None,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterward
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterward
padding_side=None, # we pad in batch afterward
return_attention_mask=False, # we pad in batch afterward
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING)
def encode(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> List[int]:
encoded_inputs = self.encode_plus(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
return encoded_inputs["input_ids"]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Tokenize and prepare for the model a sequence or a pair of sequences. .. warning:: This method is deprecated,
`__call__` should be used instead.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The first sequence to be encoded. This can be a string, a list of strings or a list of list of strings.
text_pair (`List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a list of strings (nodes of a single example) or a
list of list of strings (nodes of a batch of examples).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._encode_plus(
text=text,
xpaths=xpaths,
text_pair=text_pair,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
return self.prepare_for_model(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def prepare_for_model(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
"""
Prepares a sequence or a pair of sequences so that it can be used by the model. It adds special tokens,
truncates sequences if overflowing while taking into account the special tokens and manages a moving window
(with user defined stride) for overflowing tokens. Please Note, for *text_pair* different than `None` and
*truncation_strategy = longest_first* or `True`, it is not possible to return overflowing tokens. Such a
combination of arguments will raise an error.
Node-level `xpaths` are turned into token-level `xpath_tags_seq` and `xpath_subs_seq`. If provided, node-level
`node_labels` are turned into token-level `labels`. The node label is used for the first token of the node,
while remaining tokens are labeled with -100, such that they will be ignored by the loss function.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The first sequence to be encoded. This can be a string, a list of strings or a list of list of strings.
text_pair (`List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a list of strings (nodes of a single example) or a
list of list of strings (nodes of a batch of examples).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
tokens = []
pair_tokens = []
xpath_tags_seq = []
xpath_subs_seq = []
pair_xpath_tags_seq = []
pair_xpath_subs_seq = []
labels = []
if text_pair is None:
if node_labels is None:
# CASE 1: web page classification (training + inference) + CASE 2: token classification (inference)
for word, xpath in zip(text, xpaths):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
else:
# CASE 2: token classification (training)
for word, xpath, label in zip(text, xpaths, node_labels):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
if self.only_label_first_subword:
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
labels.extend([label] + [self.pad_token_label] * (len(word_tokens) - 1))
else:
labels.extend([label] * len(word_tokens))
else:
# CASE 3: web page question answering (inference)
# text = question
# text_pair = nodes
tokens = self.tokenize(text)
xpath_tags_seq = [self.pad_xpath_tags_seq for _ in range(len(tokens))]
xpath_subs_seq = [self.pad_xpath_subs_seq for _ in range(len(tokens))]
for word, xpath in zip(text_pair, xpaths):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
pair_tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
pair_xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
pair_xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
# Create ids + pair_ids
ids = self.convert_tokens_to_ids(tokens)
pair_ids = self.convert_tokens_to_ids(pair_tokens) if pair_tokens else None
if (
return_overflowing_tokens
and truncation_strategy == TruncationStrategy.LONGEST_FIRST
and pair_ids is not None
):
raise ValueError(
"Not possible to return overflowing tokens for pair of sequences with the "
"`longest_first`. Please select another truncation strategy than `longest_first`, "
"for instance `only_second` or `only_first`."
)
# Compute the total size of the returned encodings
pair = bool(pair_ids is not None)
len_ids = len(ids)
len_pair_ids = len(pair_ids) if pair else 0
total_len = len_ids + len_pair_ids + (self.num_special_tokens_to_add(pair=pair) if add_special_tokens else 0)
# Truncation: Handle max sequence length
overflowing_tokens = []
overflowing_xpath_tags_seq = []
overflowing_xpath_subs_seq = []
overflowing_labels = []
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and max_length and total_len > max_length:
(
ids,
xpath_tags_seq,
xpath_subs_seq,
pair_ids,
pair_xpath_tags_seq,
pair_xpath_subs_seq,
labels,
overflowing_tokens,
overflowing_xpath_tags_seq,
overflowing_xpath_subs_seq,
overflowing_labels,
) = self.truncate_sequences(
ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
pair_ids=pair_ids,
pair_xpath_tags_seq=pair_xpath_tags_seq,
pair_xpath_subs_seq=pair_xpath_subs_seq,
labels=labels,
num_tokens_to_remove=total_len - max_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
if return_token_type_ids and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
encoded_inputs = {}
if return_overflowing_tokens:
encoded_inputs["overflowing_tokens"] = overflowing_tokens
encoded_inputs["overflowing_xpath_tags_seq"] = overflowing_xpath_tags_seq
encoded_inputs["overflowing_xpath_subs_seq"] = overflowing_xpath_subs_seq
encoded_inputs["overflowing_labels"] = overflowing_labels
encoded_inputs["num_truncated_tokens"] = total_len - max_length
# Add special tokens
if add_special_tokens:
sequence = self.build_inputs_with_special_tokens(ids, pair_ids)
token_type_ids = self.create_token_type_ids_from_sequences(ids, pair_ids)
xpath_tags_ids = self.build_xpath_tags_with_special_tokens(xpath_tags_seq, pair_xpath_tags_seq)
xpath_subs_ids = self.build_xpath_subs_with_special_tokens(xpath_subs_seq, pair_xpath_subs_seq)
if labels:
labels = [self.pad_token_label] + labels + [self.pad_token_label]
else:
sequence = ids + pair_ids if pair else ids
token_type_ids = [0] * len(ids) + ([0] * len(pair_ids) if pair else [])
xpath_tags_ids = xpath_tags_seq + pair_xpath_tags_seq if pair else xpath_tags_seq
xpath_subs_ids = xpath_subs_seq + pair_xpath_subs_seq if pair else xpath_subs_seq
# Build output dictionary
encoded_inputs["input_ids"] = sequence
encoded_inputs["xpath_tags_seq"] = xpath_tags_ids
encoded_inputs["xpath_subs_seq"] = xpath_subs_ids
if return_token_type_ids:
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(ids, pair_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(sequence)
if labels:
encoded_inputs["labels"] = labels
# Check lengths
self._eventual_warn_about_too_long_sequence(encoded_inputs["input_ids"], max_length, verbose)
# Padding
if padding_strategy != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
padding=padding_strategy.value,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
def truncate_sequences(
self,
ids: List[int],
xpath_tags_seq: List[List[int]],
xpath_subs_seq: List[List[int]],
pair_ids: Optional[List[int]] = None,
pair_xpath_tags_seq: Optional[List[List[int]]] = None,
pair_xpath_subs_seq: Optional[List[List[int]]] = None,
labels: Optional[List[int]] = None,
num_tokens_to_remove: int = 0,
truncation_strategy: Union[str, TruncationStrategy] = "longest_first",
stride: int = 0,
) -> Tuple[List[int], List[int], List[int]]:
"""
Args:
Truncates a sequence pair in-place following the strategy.
ids (`List[int]`):
Tokenized input ids of the first sequence. Can be obtained from a string by chaining the `tokenize` and
`convert_tokens_to_ids` methods.
xpath_tags_seq (`List[List[int]]`):
XPath tag IDs of the first sequence.
xpath_subs_seq (`List[List[int]]`):
XPath sub IDs of the first sequence.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence. Can be obtained from a string by chaining the `tokenize`
and `convert_tokens_to_ids` methods.
pair_xpath_tags_seq (`List[List[int]]`, *optional*):
XPath tag IDs of the second sequence.
pair_xpath_subs_seq (`List[List[int]]`, *optional*):
XPath sub IDs of the second sequence.
num_tokens_to_remove (`int`, *optional*, defaults to 0):
Number of tokens to remove using the truncation strategy.
truncation_strategy (`str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to
`False`):
The strategy to follow for truncation. Can be:
- `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will truncate
token by token, removing a token from the longest sequence in the pair if a pair of sequences (or a
batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths greater
than the model maximum admissible input size).
stride (`int`, *optional*, defaults to 0):
If set to a positive number, the overflowing tokens returned will contain some tokens from the main
sequence returned. The value of this argument defines the number of additional tokens.
Returns:
`Tuple[List[int], List[int], List[int]]`: The truncated `ids`, the truncated `pair_ids` and the list of
overflowing tokens. Note: The *longest_first* strategy returns empty list of overflowing tokens if a pair
of sequences (or a batch of pairs) is provided.
"""
if num_tokens_to_remove <= 0:
return ids, xpath_tags_seq, xpath_subs_seq, pair_ids, pair_xpath_tags_seq, pair_xpath_subs_seq, [], [], []
if not isinstance(truncation_strategy, TruncationStrategy):
truncation_strategy = TruncationStrategy(truncation_strategy)
overflowing_tokens = []
overflowing_xpath_tags_seq = []
overflowing_xpath_subs_seq = []
overflowing_labels = []
if truncation_strategy == TruncationStrategy.ONLY_FIRST or (
truncation_strategy == TruncationStrategy.LONGEST_FIRST and pair_ids is None
):
if len(ids) > num_tokens_to_remove:
window_len = min(len(ids), stride + num_tokens_to_remove)
overflowing_tokens = ids[-window_len:]
overflowing_xpath_tags_seq = xpath_tags_seq[-window_len:]
overflowing_xpath_subs_seq = xpath_subs_seq[-window_len:]
ids = ids[:-num_tokens_to_remove]
xpath_tags_seq = xpath_tags_seq[:-num_tokens_to_remove]
xpath_subs_seq = xpath_subs_seq[:-num_tokens_to_remove]
labels = labels[:-num_tokens_to_remove]
else:
error_msg = (
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the first sequence has a length {len(ids)}. "
)
if truncation_strategy == TruncationStrategy.ONLY_FIRST:
error_msg = (
error_msg + "Please select another truncation strategy than "
f"{truncation_strategy}, for instance 'longest_first' or 'only_second'."
)
logger.error(error_msg)
elif truncation_strategy == TruncationStrategy.LONGEST_FIRST:
logger.warning(
"Be aware, overflowing tokens are not returned for the setting you have chosen,"
f" i.e. sequence pairs with the '{TruncationStrategy.LONGEST_FIRST.value}' "
"truncation strategy. So the returned list will always be empty even if some "
"tokens have been removed."
)
for _ in range(num_tokens_to_remove):
if pair_ids is None or len(ids) > len(pair_ids):
ids = ids[:-1]
xpath_tags_seq = xpath_tags_seq[:-1]
xpath_subs_seq = xpath_subs_seq[:-1]
labels = labels[:-1]
else:
pair_ids = pair_ids[:-1]
pair_xpath_tags_seq = pair_xpath_tags_seq[:-1]
pair_xpath_subs_seq = pair_xpath_subs_seq[:-1]
elif truncation_strategy == TruncationStrategy.ONLY_SECOND and pair_ids is not None:
if len(pair_ids) > num_tokens_to_remove:
window_len = min(len(pair_ids), stride + num_tokens_to_remove)
overflowing_tokens = pair_ids[-window_len:]
overflowing_xpath_tags_seq = pair_xpath_tags_seq[-window_len:]
overflowing_xpath_subs_seq = pair_xpath_subs_seq[-window_len:]
pair_ids = pair_ids[:-num_tokens_to_remove]
pair_xpath_tags_seq = pair_xpath_tags_seq[:-num_tokens_to_remove]
pair_xpath_subs_seq = pair_xpath_subs_seq[:-num_tokens_to_remove]
else:
logger.error(
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the second sequence has a length {len(pair_ids)}. "
f"Please select another truncation strategy than {truncation_strategy}, "
"for instance 'longest_first' or 'only_first'."
)
return (
ids,
xpath_tags_seq,
xpath_subs_seq,
pair_ids,
pair_xpath_tags_seq,
pair_xpath_subs_seq,
labels,
overflowing_tokens,
overflowing_xpath_tags_seq,
overflowing_xpath_subs_seq,
overflowing_labels,
)
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Args:
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
padding_side:
The side on which the model should have padding applied. Should be selected between ['right', 'left'].
Default value is picked from the class attribute of the same name.
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
required_input = encoded_inputs[self.model_input_names[0]]
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(required_input)
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and len(required_input) != max_length
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(required_input)
if needs_to_be_padded:
difference = max_length - len(required_input)
padding_side = padding_side if padding_side is not None else self.padding_side
if padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [self.pad_token_type_id] * difference
)
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = (
encoded_inputs["xpath_tags_seq"] + [self.pad_xpath_tags_seq] * difference
)
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = (
encoded_inputs["xpath_subs_seq"] + [self.pad_xpath_subs_seq] * difference
)
if "labels" in encoded_inputs:
encoded_inputs["labels"] = encoded_inputs["labels"] + [self.pad_token_label] * difference
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs[self.model_input_names[0]] = required_input + [self.pad_token_id] * difference
elif padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [self.pad_token_type_id] * difference + encoded_inputs[
"token_type_ids"
]
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = [self.pad_xpath_tags_seq] * difference + encoded_inputs[
"xpath_tags_seq"
]
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = [self.pad_xpath_subs_seq] * difference + encoded_inputs[
"xpath_subs_seq"
]
if "labels" in encoded_inputs:
encoded_inputs["labels"] = [self.pad_token_label] * difference + encoded_inputs["labels"]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs[self.model_input_names[0]] = [self.pad_token_id] * difference + required_input
else:
raise ValueError("Invalid padding strategy:" + str(padding_side))
return encoded_inputs | class_definition | 6,591 | 70,107 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/tokenization_markuplm.py | null | 4,265 |
class MarkupLMConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`MarkupLMModel`]. It is used to instantiate a
MarkupLM model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the MarkupLM
[microsoft/markuplm-base](https://huggingface.co/microsoft/markuplm-base) architecture.
Configuration objects inherit from [`BertConfig`] and can be used to control the model outputs. Read the
documentation from [`BertConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the MarkupLM model. Defines the different tokens that can be represented by the
*inputs_ids* passed to the forward method of [`MarkupLMModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed into [`MarkupLMModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
max_tree_id_unit_embeddings (`int`, *optional*, defaults to 1024):
The maximum value that the tree id unit embedding might ever use. Typically set this to something large
just in case (e.g., 1024).
max_xpath_tag_unit_embeddings (`int`, *optional*, defaults to 256):
The maximum value that the xpath tag unit embedding might ever use. Typically set this to something large
just in case (e.g., 256).
max_xpath_subs_unit_embeddings (`int`, *optional*, defaults to 1024):
The maximum value that the xpath subscript unit embedding might ever use. Typically set this to something
large just in case (e.g., 1024).
tag_pad_id (`int`, *optional*, defaults to 216):
The id of the padding token in the xpath tags.
subs_pad_id (`int`, *optional*, defaults to 1001):
The id of the padding token in the xpath subscripts.
xpath_tag_unit_hidden_size (`int`, *optional*, defaults to 32):
The hidden size of each tree id unit. One complete tree index will have
(50*xpath_tag_unit_hidden_size)-dim.
max_depth (`int`, *optional*, defaults to 50):
The maximum depth in xpath.
Examples:
```python
>>> from transformers import MarkupLMModel, MarkupLMConfig
>>> # Initializing a MarkupLM microsoft/markuplm-base style configuration
>>> configuration = MarkupLMConfig()
>>> # Initializing a model from the microsoft/markuplm-base style configuration
>>> model = MarkupLMModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "markuplm"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
bos_token_id=0,
eos_token_id=2,
max_xpath_tag_unit_embeddings=256,
max_xpath_subs_unit_embeddings=1024,
tag_pad_id=216,
subs_pad_id=1001,
xpath_unit_hidden_size=32,
max_depth=50,
position_embedding_type="absolute",
use_cache=True,
classifier_dropout=None,
**kwargs,
):
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
**kwargs,
)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_size = type_vocab_size
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
self.classifier_dropout = classifier_dropout
# additional properties
self.max_depth = max_depth
self.max_xpath_tag_unit_embeddings = max_xpath_tag_unit_embeddings
self.max_xpath_subs_unit_embeddings = max_xpath_subs_unit_embeddings
self.tag_pad_id = tag_pad_id
self.subs_pad_id = subs_pad_id
self.xpath_unit_hidden_size = xpath_unit_hidden_size | class_definition | 788 | 7,310 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/configuration_markuplm.py | null | 4,266 |
class MarkupLMProcessor(ProcessorMixin):
r"""
Constructs a MarkupLM processor which combines a MarkupLM feature extractor and a MarkupLM tokenizer into a single
processor.
[`MarkupLMProcessor`] offers all the functionalities you need to prepare data for the model.
It first uses [`MarkupLMFeatureExtractor`] to extract nodes and corresponding xpaths from one or more HTML strings.
Next, these are provided to [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`], which turns them into token-level
`input_ids`, `attention_mask`, `token_type_ids`, `xpath_tags_seq` and `xpath_subs_seq`.
Args:
feature_extractor (`MarkupLMFeatureExtractor`):
An instance of [`MarkupLMFeatureExtractor`]. The feature extractor is a required input.
tokenizer (`MarkupLMTokenizer` or `MarkupLMTokenizerFast`):
An instance of [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`]. The tokenizer is a required input.
parse_html (`bool`, *optional*, defaults to `True`):
Whether or not to use `MarkupLMFeatureExtractor` to parse HTML strings into nodes and corresponding xpaths.
"""
feature_extractor_class = "MarkupLMFeatureExtractor"
tokenizer_class = ("MarkupLMTokenizer", "MarkupLMTokenizerFast")
parse_html = True
def __call__(
self,
html_strings=None,
nodes=None,
xpaths=None,
node_labels=None,
questions=None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> BatchEncoding:
"""
This method first forwards the `html_strings` argument to [`~MarkupLMFeatureExtractor.__call__`]. Next, it
passes the `nodes` and `xpaths` along with the additional arguments to [`~MarkupLMTokenizer.__call__`] and
returns the output.
Optionally, one can also provide a `text` argument which is passed along as first sequence.
Please refer to the docstring of the above two methods for more information.
"""
# first, create nodes and xpaths
if self.parse_html:
if html_strings is None:
raise ValueError("Make sure to pass HTML strings in case `parse_html` is set to `True`")
if nodes is not None or xpaths is not None or node_labels is not None:
raise ValueError(
"Please don't pass nodes, xpaths nor node labels in case `parse_html` is set to `True`"
)
features = self.feature_extractor(html_strings)
nodes = features["nodes"]
xpaths = features["xpaths"]
else:
if html_strings is not None:
raise ValueError("You have passed HTML strings but `parse_html` is set to `False`.")
if nodes is None or xpaths is None:
raise ValueError("Make sure to pass nodes and xpaths in case `parse_html` is set to `False`")
# # second, apply the tokenizer
if questions is not None and self.parse_html:
if isinstance(questions, str):
questions = [questions] # add batch dimension (as the feature extractor always adds a batch dimension)
encoded_inputs = self.tokenizer(
text=questions if questions is not None else nodes,
text_pair=nodes if questions is not None else None,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to TrOCRTokenizer's [`~PreTrainedTokenizer.batch_decode`]. Please refer
to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to TrOCRTokenizer's [`~PreTrainedTokenizer.decode`]. Please refer to the
docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
@property
def model_input_names(self):
tokenizer_input_names = self.tokenizer.model_input_names
return tokenizer_input_names | class_definition | 856 | 6,348 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/processing_markuplm.py | null | 4,267 |
class MarkupLMFeatureExtractor(FeatureExtractionMixin):
r"""
Constructs a MarkupLM feature extractor. This can be used to get a list of nodes and corresponding xpaths from HTML
strings.
This feature extractor inherits from [`~feature_extraction_utils.PreTrainedFeatureExtractor`] which contains most
of the main methods. Users should refer to this superclass for more information regarding those methods.
"""
def __init__(self, **kwargs):
requires_backends(self, ["bs4"])
super().__init__(**kwargs)
def xpath_soup(self, element):
xpath_tags = []
xpath_subscripts = []
child = element if element.name else element.parent
for parent in child.parents: # type: bs4.element.Tag
siblings = parent.find_all(child.name, recursive=False)
xpath_tags.append(child.name)
xpath_subscripts.append(
0 if 1 == len(siblings) else next(i for i, s in enumerate(siblings, 1) if s is child)
)
child = parent
xpath_tags.reverse()
xpath_subscripts.reverse()
return xpath_tags, xpath_subscripts
def get_three_from_single(self, html_string):
html_code = BeautifulSoup(html_string, "html.parser")
all_doc_strings = []
string2xtag_seq = []
string2xsubs_seq = []
for element in html_code.descendants:
if isinstance(element, bs4.element.NavigableString):
if type(element.parent) is not bs4.element.Tag:
continue
text_in_this_tag = html.unescape(element).strip()
if not text_in_this_tag:
continue
all_doc_strings.append(text_in_this_tag)
xpath_tags, xpath_subscripts = self.xpath_soup(element)
string2xtag_seq.append(xpath_tags)
string2xsubs_seq.append(xpath_subscripts)
if len(all_doc_strings) != len(string2xtag_seq):
raise ValueError("Number of doc strings and xtags does not correspond")
if len(all_doc_strings) != len(string2xsubs_seq):
raise ValueError("Number of doc strings and xsubs does not correspond")
return all_doc_strings, string2xtag_seq, string2xsubs_seq
def construct_xpath(self, xpath_tags, xpath_subscripts):
xpath = ""
for tagname, subs in zip(xpath_tags, xpath_subscripts):
xpath += f"/{tagname}"
if subs != 0:
xpath += f"[{subs}]"
return xpath
def __call__(self, html_strings) -> BatchFeature:
"""
Main method to prepare for the model one or several HTML strings.
Args:
html_strings (`str`, `List[str]`):
The HTML string or batch of HTML strings from which to extract nodes and corresponding xpaths.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **nodes** -- Nodes.
- **xpaths** -- Corresponding xpaths.
Examples:
```python
>>> from transformers import MarkupLMFeatureExtractor
>>> page_name_1 = "page1.html"
>>> page_name_2 = "page2.html"
>>> page_name_3 = "page3.html"
>>> with open(page_name_1) as f:
... single_html_string = f.read()
>>> feature_extractor = MarkupLMFeatureExtractor()
>>> # single example
>>> encoding = feature_extractor(single_html_string)
>>> print(encoding.keys())
>>> # dict_keys(['nodes', 'xpaths'])
>>> # batched example
>>> multi_html_strings = []
>>> with open(page_name_2) as f:
... multi_html_strings.append(f.read())
>>> with open(page_name_3) as f:
... multi_html_strings.append(f.read())
>>> encoding = feature_extractor(multi_html_strings)
>>> print(encoding.keys())
>>> # dict_keys(['nodes', 'xpaths'])
```"""
# Input type checking for clearer error
valid_strings = False
# Check that strings has a valid type
if isinstance(html_strings, str):
valid_strings = True
elif isinstance(html_strings, (list, tuple)):
if len(html_strings) == 0 or isinstance(html_strings[0], str):
valid_strings = True
if not valid_strings:
raise ValueError(
"HTML strings must of type `str`, `List[str]` (batch of examples), "
f"but is of type {type(html_strings)}."
)
is_batched = bool(isinstance(html_strings, (list, tuple)) and (isinstance(html_strings[0], str)))
if not is_batched:
html_strings = [html_strings]
# Get nodes + xpaths
nodes = []
xpaths = []
for html_string in html_strings:
all_doc_strings, string2xtag_seq, string2xsubs_seq = self.get_three_from_single(html_string)
nodes.append(all_doc_strings)
xpath_strings = []
for node, tag_list, sub_list in zip(all_doc_strings, string2xtag_seq, string2xsubs_seq):
xpath_string = self.construct_xpath(tag_list, sub_list)
xpath_strings.append(xpath_string)
xpaths.append(xpath_strings)
# return as Dict
data = {"nodes": nodes, "xpaths": xpaths}
encoded_inputs = BatchFeature(data=data, tensor_type=None)
return encoded_inputs | class_definition | 924 | 6,407 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/feature_extraction_markuplm.py | null | 4,268 |
class MarkupLMTokenizerFast(PreTrainedTokenizerFast):
r"""
Construct a MarkupLM tokenizer. Based on byte-level Byte-Pair-Encoding (BPE).
[`MarkupLMTokenizerFast`] can be used to turn HTML strings into to token-level `input_ids`, `attention_mask`,
`token_type_ids`, `xpath_tags_seq` and `xpath_tags_seq`. This tokenizer inherits from [`PreTrainedTokenizer`] which
contains most of the main methods.
Users should refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
errors (`str`, *optional*, defaults to `"replace"`):
Paradigm to follow when decoding bytes to UTF-8. See
[bytes.decode](https://docs.python.org/3/library/stdtypes.html#bytes.decode) for more information.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
add_prefix_space (`bool`, *optional*, defaults to `False`):
Whether or not to add an initial space to the input. This allows to treat the leading word just as any
other word. (RoBERTa tokenizer detect beginning of words by the preceding space).
"""
vocab_files_names = VOCAB_FILES_NAMES
slow_tokenizer_class = MarkupLMTokenizer
def __init__(
self,
vocab_file,
merges_file,
tags_dict,
tokenizer_file=None,
errors="replace",
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
add_prefix_space=False,
max_depth=50,
max_width=1000,
pad_width=1001,
pad_token_label=-100,
only_label_first_subword=True,
trim_offsets=False,
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
super().__init__(
vocab_file=vocab_file,
merges_file=merges_file,
tags_dict=tags_dict,
tokenizer_file=tokenizer_file,
errors=errors,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
add_prefix_space=add_prefix_space,
trim_offsets=trim_offsets,
max_depth=max_depth,
max_width=max_width,
pad_width=pad_width,
pad_token_label=pad_token_label,
only_label_first_subword=only_label_first_subword,
**kwargs,
)
if trim_offsets:
# Not implemented yet, because we need to chain two post processors which is not possible yet
# We need to wait for https://github.com/huggingface/tokenizers/pull/1005
# With `trim_offsets=False` we don't need to do add `processors.ByteLevel(trim_offsets=False)`
# because it's not doing anything
raise NotImplementedError(
"`trim_offsets=True` is not implemented for MarkupLMTokenizerFast. Please set it to False."
)
self.tags_dict = tags_dict
tokenizer_component = "post_processor"
tokenizer_component_instance = getattr(self.backend_tokenizer, tokenizer_component, None)
if tokenizer_component_instance:
state = json.loads(tokenizer_component_instance.__getstate__())
# The lists 'sep' and 'cls' must be cased in tuples for the object `post_processor_class`
if "sep" in state:
state["sep"] = tuple(state["sep"])
if "cls" in state:
state["cls"] = tuple(state["cls"])
changes_to_apply = False
if state.get("add_prefix_space", add_prefix_space) != add_prefix_space:
state["add_prefix_space"] = add_prefix_space
changes_to_apply = True
if changes_to_apply:
component_class = getattr(processors, state.pop("type"))
new_value = component_class(**state)
setattr(self.backend_tokenizer, tokenizer_component, new_value)
# additional properties
self.max_depth = max_depth
self.max_width = max_width
self.pad_width = pad_width
self.unk_tag_id = len(self.tags_dict)
self.pad_tag_id = self.unk_tag_id + 1
self.pad_xpath_tags_seq = [self.pad_tag_id] * self.max_depth
self.pad_xpath_subs_seq = [self.pad_width] * self.max_depth
self.pad_token_label = pad_token_label
self.only_label_first_subword = only_label_first_subword
def get_xpath_seq(self, xpath):
"""
Given the xpath expression of one particular node (like "/html/body/div/li[1]/div/span[2]"), return a list of
tag IDs and corresponding subscripts, taking into account max depth.
"""
xpath_tags_list = []
xpath_subs_list = []
xpath_units = xpath.split("/")
for unit in xpath_units:
if not unit.strip():
continue
name_subs = unit.strip().split("[")
tag_name = name_subs[0]
sub = 0 if len(name_subs) == 1 else int(name_subs[1][:-1])
xpath_tags_list.append(self.tags_dict.get(tag_name, self.unk_tag_id))
xpath_subs_list.append(min(self.max_width, sub))
xpath_tags_list = xpath_tags_list[: self.max_depth]
xpath_subs_list = xpath_subs_list[: self.max_depth]
xpath_tags_list += [self.pad_tag_id] * (self.max_depth - len(xpath_tags_list))
xpath_subs_list += [self.pad_width] * (self.max_depth - len(xpath_subs_list))
return xpath_tags_list, xpath_subs_list
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
text: Union[TextInput, PreTokenizedInput, List[TextInput], List[PreTokenizedInput]],
text_pair: Optional[Union[PreTokenizedInput, List[PreTokenizedInput]]] = None,
xpaths: Union[List[List[int]], List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences with nodes, xpaths and optional labels.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string, a list of strings
(words of a single example or questions of a batch of examples) or a list of list of strings (batch of
words).
text_pair (`List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence should be a list of strings
(pretokenized string).
xpaths (`List[List[int]]`, `List[List[List[int]]]`):
Node-level xpaths. Each bounding box should be normalized to be on a 0-1000 scale.
node_labels (`List[int]`, `List[List[int]]`, *optional*):
Node-level integer labels (for token classification tasks).
"""
# Input type checking for clearer error
def _is_valid_text_input(t):
if isinstance(t, str):
# Strings are fine
return True
elif isinstance(t, (list, tuple)):
# List are fine as long as they are...
if len(t) == 0:
# ... empty
return True
elif isinstance(t[0], str):
# ... list of strings
return True
elif isinstance(t[0], (list, tuple)):
# ... list with an empty list or with a list of strings
return len(t[0]) == 0 or isinstance(t[0][0], str)
else:
return False
else:
return False
if text_pair is not None:
# in case text + text_pair are provided, text = questions, text_pair = nodes
if not _is_valid_text_input(text):
raise ValueError("text input must of type `str` (single example) or `List[str]` (batch of examples). ")
if not isinstance(text_pair, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
else:
# in case only text is provided => must be nodes
if not isinstance(text, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
if text_pair is not None:
is_batched = isinstance(text, (list, tuple))
else:
is_batched = isinstance(text, (list, tuple)) and text and isinstance(text[0], (list, tuple))
nodes = text if text_pair is None else text_pair
assert xpaths is not None, "You must provide corresponding xpaths"
if is_batched:
assert len(nodes) == len(xpaths), "You must provide nodes and xpaths for an equal amount of examples"
for nodes_example, xpaths_example in zip(nodes, xpaths):
assert len(nodes_example) == len(xpaths_example), "You must provide as many nodes as there are xpaths"
else:
assert len(nodes) == len(xpaths), "You must provide as many nodes as there are xpaths"
if is_batched:
if text_pair is not None and len(text) != len(text_pair):
raise ValueError(
f"batch length of `text`: {len(text)} does not match batch length of `text_pair`:"
f" {len(text_pair)}."
)
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
is_pair = bool(text_pair is not None)
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def tokenize(self, text: str, pair: Optional[str] = None, add_special_tokens: bool = False, **kwargs) -> List[str]:
batched_input = [(text, pair)] if pair else [text]
encodings = self._tokenizer.encode_batch(
batched_input, add_special_tokens=add_special_tokens, is_pretokenized=False, **kwargs
)
return encodings[0].tokens
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Tokenize and prepare for the model a sequence or a pair of sequences. .. warning:: This method is deprecated,
`__call__` should be used instead.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The first sequence to be encoded. This can be a string, a list of strings or a list of list of strings.
text_pair (`List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a list of strings (words of a single example) or a
list of list of strings (words of a batch of examples).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._encode_plus(
text=text,
xpaths=xpaths,
text_pair=text_pair,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[List[List[int]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
if not isinstance(batch_text_or_text_pairs, list):
raise TypeError(f"batch_text_or_text_pairs has to be a list (got {type(batch_text_or_text_pairs)})")
# Set the truncation and padding strategy and restore the initial configuration
self.set_truncation_and_padding(
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
)
if is_pair:
batch_text_or_text_pairs = [([text], text_pair) for text, text_pair in batch_text_or_text_pairs]
encodings = self._tokenizer.encode_batch(
batch_text_or_text_pairs,
add_special_tokens=add_special_tokens,
is_pretokenized=True, # we set this to True as MarkupLM always expects pretokenized inputs
)
# Convert encoding to dict
# `Tokens` is a tuple of (List[Dict[str, List[List[int]]]] or List[Dict[str, 2D-Tensor]],
# List[EncodingFast]) with nested dimensions corresponding to batch, overflows, sequence length
tokens_and_encodings = [
self._convert_encoding(
encoding=encoding,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=True
if node_labels is not None
else return_offsets_mapping, # we use offsets to create the labels
return_length=return_length,
verbose=verbose,
)
for encoding in encodings
]
# Convert the output to have dict[list] from list[dict] and remove the additional overflows dimension
# From (variable) shape (batch, overflows, sequence length) to ~ (batch * overflows, sequence length)
# (we say ~ because the number of overflow varies with the example in the batch)
#
# To match each overflowing sample with the original sample in the batch
# we add an overflow_to_sample_mapping array (see below)
sanitized_tokens = {}
for key in tokens_and_encodings[0][0].keys():
stack = [e for item, _ in tokens_and_encodings for e in item[key]]
sanitized_tokens[key] = stack
sanitized_encodings = [e for _, item in tokens_and_encodings for e in item]
# If returning overflowing tokens, we need to return a mapping
# from the batch idx to the original sample
if return_overflowing_tokens:
overflow_to_sample_mapping = []
for i, (toks, _) in enumerate(tokens_and_encodings):
overflow_to_sample_mapping += [i] * len(toks["input_ids"])
sanitized_tokens["overflow_to_sample_mapping"] = overflow_to_sample_mapping
for input_ids in sanitized_tokens["input_ids"]:
self._eventual_warn_about_too_long_sequence(input_ids, max_length, verbose)
# create the token-level xpaths tags and subscripts
xpath_tags_seq = []
xpath_subs_seq = []
for batch_index in range(len(sanitized_tokens["input_ids"])):
if return_overflowing_tokens:
original_index = sanitized_tokens["overflow_to_sample_mapping"][batch_index]
else:
original_index = batch_index
xpath_tags_seq_example = []
xpath_subs_seq_example = []
for id, sequence_id, word_id in zip(
sanitized_tokens["input_ids"][batch_index],
sanitized_encodings[batch_index].sequence_ids,
sanitized_encodings[batch_index].word_ids,
):
if word_id is not None:
if is_pair and sequence_id == 0:
xpath_tags_seq_example.append(self.pad_xpath_tags_seq)
xpath_subs_seq_example.append(self.pad_xpath_subs_seq)
else:
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpaths[original_index][word_id])
xpath_tags_seq_example.extend([xpath_tags_list])
xpath_subs_seq_example.extend([xpath_subs_list])
else:
if id in [self.cls_token_id, self.sep_token_id, self.pad_token_id]:
xpath_tags_seq_example.append(self.pad_xpath_tags_seq)
xpath_subs_seq_example.append(self.pad_xpath_subs_seq)
else:
raise ValueError("Id not recognized")
xpath_tags_seq.append(xpath_tags_seq_example)
xpath_subs_seq.append(xpath_subs_seq_example)
sanitized_tokens["xpath_tags_seq"] = xpath_tags_seq
sanitized_tokens["xpath_subs_seq"] = xpath_subs_seq
# optionally, create the labels
if node_labels is not None:
labels = []
for batch_index in range(len(sanitized_tokens["input_ids"])):
if return_overflowing_tokens:
original_index = sanitized_tokens["overflow_to_sample_mapping"][batch_index]
else:
original_index = batch_index
labels_example = []
for id, offset, word_id in zip(
sanitized_tokens["input_ids"][batch_index],
sanitized_tokens["offset_mapping"][batch_index],
sanitized_encodings[batch_index].word_ids,
):
if word_id is not None:
if self.only_label_first_subword:
if offset[0] == 0:
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
labels_example.append(node_labels[original_index][word_id])
else:
labels_example.append(self.pad_token_label)
else:
labels_example.append(node_labels[original_index][word_id])
else:
labels_example.append(self.pad_token_label)
labels.append(labels_example)
sanitized_tokens["labels"] = labels
# finally, remove offsets if the user didn't want them
if not return_offsets_mapping:
del sanitized_tokens["offset_mapping"]
return BatchEncoding(sanitized_tokens, sanitized_encodings, tensor_type=return_tensors)
def _encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[bool] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
# make it a batched input
# 2 options:
# 1) only text, in case text must be a list of str
# 2) text + text_pair, in which case text = str and text_pair a list of str
batched_input = [(text, text_pair)] if text_pair else [text]
batched_xpaths = [xpaths]
batched_node_labels = [node_labels] if node_labels is not None else None
batched_output = self._batch_encode_plus(
batched_input,
is_pair=bool(text_pair is not None),
xpaths=batched_xpaths,
node_labels=batched_node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
# Return tensor is None, then we can remove the leading batch axis
# Overflowing tokens are returned as a batch of output so we keep them in this case
if return_tensors is None and not return_overflowing_tokens:
batched_output = BatchEncoding(
{
key: value[0] if len(value) > 0 and isinstance(value[0], list) else value
for key, value in batched_output.items()
},
batched_output.encodings,
)
self._eventual_warn_about_too_long_sequence(batched_output["input_ids"], max_length, verbose)
return batched_output
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Args:
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
padding_side:
The side on which the model should have padding applied. Should be selected between ['right', 'left'].
Default value is picked from the class attribute of the same name.
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
required_input = encoded_inputs[self.model_input_names[0]]
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(required_input)
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and len(required_input) != max_length
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(required_input)
if needs_to_be_padded:
difference = max_length - len(required_input)
padding_side = padding_side if padding_side is not None else self.padding_side
if padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [self.pad_token_type_id] * difference
)
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = (
encoded_inputs["xpath_tags_seq"] + [self.pad_xpath_tags_seq] * difference
)
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = (
encoded_inputs["xpath_subs_seq"] + [self.pad_xpath_subs_seq] * difference
)
if "labels" in encoded_inputs:
encoded_inputs["labels"] = encoded_inputs["labels"] + [self.pad_token_label] * difference
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs[self.model_input_names[0]] = required_input + [self.pad_token_id] * difference
elif padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [self.pad_token_type_id] * difference + encoded_inputs[
"token_type_ids"
]
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = [self.pad_xpath_tags_seq] * difference + encoded_inputs[
"xpath_tags_seq"
]
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = [self.pad_xpath_subs_seq] * difference + encoded_inputs[
"xpath_subs_seq"
]
if "labels" in encoded_inputs:
encoded_inputs["labels"] = [self.pad_token_label] * difference + encoded_inputs["labels"]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs[self.model_input_names[0]] = [self.pad_token_id] * difference + required_input
else:
raise ValueError("Invalid padding strategy:" + str(padding_side))
return encoded_inputs
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A RoBERTa sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. RoBERTa does not
make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + token_ids_1 + sep) * [0]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
files = self._tokenizer.model.save(save_directory, name=filename_prefix)
return tuple(files) | class_definition | 2,829 | 43,285 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/markuplm/tokenization_markuplm_fast.py | null | 4,269 |
class WordpieceTokenizer:
def __init__(self, vocab, unk_token="<unk>", max_input_chars_per_word=200):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, token):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
return [self.unk_token]
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
sub_tokens.append(self.unk_token)
start += 1
else:
sub_tokens.append(cur_substr)
start = end
return sub_tokens | class_definition | 1,387 | 2,351 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/tokenization_cpmant.py | null | 4,270 |
class CpmAntTokenizer(PreTrainedTokenizer):
"""
Construct a CPMAnt tokenizer. Based on byte-level Byte-Pair-Encoding.
Args:
vocab_file (`str`):
Path to the vocabulary file.
bod_token (`str`, *optional*, defaults to `"<d>"`):
The beginning of document token.
eod_token (`str`, *optional*, defaults to `"</d>"`):
The end of document token.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token.
line_token (`str`, *optional*, defaults to `"</n>"`):
The line token.
space_token (`str`, *optional*, defaults to `"</_>"`):
The space token.
"""
vocab_files_names = VOCAB_FILES_NAMES
model_input_names = ["input_ids", "attention_mask"]
add_prefix_space = False
def __init__(
self,
vocab_file,
bod_token="<d>",
eod_token="</d>",
bos_token="<s>",
eos_token="</s>",
pad_token="<pad>",
unk_token="<unk>",
line_token="</n>",
space_token="</_>",
padding_side="left",
**kwargs,
):
requires_backends(self, ["jieba"])
self.bod_token = bod_token
self.eod_token = eod_token
self.encoder = load_vocab(vocab_file)
self.encoder[" "] = self.encoder[space_token]
self.encoder["\n"] = self.encoder[line_token]
del self.encoder[space_token]
del self.encoder[line_token]
self.encoder = collections.OrderedDict(sorted(self.encoder.items(), key=lambda x: x[1]))
self.decoder = {v: k for k, v in self.encoder.items()}
self.wordpiece_tokenizer = WordpieceTokenizer(vocab=self.encoder, unk_token=unk_token)
super().__init__(
bod_token=bod_token,
eod_token=eod_token,
bos_token=bos_token,
eos_token=eos_token,
pad_token=pad_token,
unk_token=unk_token,
line_token=line_token,
space_token=space_token,
padding_side=padding_side,
**kwargs,
)
@property
def bod_token_id(self):
return self.encoder[self.bod_token]
@property
def eod_token_id(self):
return self.encoder[self.eod_token]
@property
def newline_id(self):
return self.encoder["\n"]
@property
def vocab_size(self) -> int:
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def _tokenize(self, text):
"""Tokenize a string."""
output_tokens = []
for x in jieba.cut(text, cut_all=False):
output_tokens.extend(self.wordpiece_tokenizer.tokenize(x))
return output_tokens
def _decode(self, token_ids, **kwargs):
"""Decode ids into a string."""
token_ids = [i for i in token_ids if i >= 0]
token_ids = [
x for x in token_ids if x != self.pad_token_id and x != self.eos_token_id and x != self.bos_token_id
]
return super()._decode(token_ids, **kwargs)
def check(self, token):
return token in self.encoder
def convert_tokens_to_string(self, tokens: List[str]) -> str:
return "".join(tokens)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if os.path.isdir(save_directory):
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
index = 0
if " " in self.encoder:
self.encoder["</_>"] = self.encoder[" "]
del self.encoder[" "]
if "\n" in self.encoder:
self.encoder["</n>"] = self.encoder["\n"]
del self.encoder["\n"]
self.encoder = collections.OrderedDict(sorted(self.encoder.items(), key=lambda x: x[1]))
with open(vocab_file, "w", encoding="utf-8") as writer:
for token, token_index in self.encoder.items():
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
def build_inputs_with_special_tokens(self, token_ids_0: List[int], token_ids_1: List[int] = None) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A CPMAnt sequence has the following format:
- single sequence: `[BOS] Sequence`.
Args:
token_ids_0 (`List[int]`): The first tokenized sequence that special tokens will be added.
token_ids_1 (`List[int]`): The optional second tokenized sequence that special tokens will be added.
Returns:
`List[int]`: The model input with special tokens.
"""
if token_ids_1 is None:
return [self.bos_token_id] + token_ids_0
return [self.bos_token_id] + token_ids_0 + [self.bos_token_id] + token_ids_1
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`): List of IDs.
token_ids_1 (`List[int]`, *optional*): Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1))
return [1] + ([0] * len(token_ids_0)) | class_definition | 2,354 | 9,703 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/tokenization_cpmant.py | null | 4,271 |
class CpmAntConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`CpmAntModel`]. It is used to instantiate an
CPMAnt model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the CPMAnt
[openbmb/cpm-ant-10b](https://huggingface.co/openbmb/cpm-ant-10b) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30720):
Vocabulary size of the CPMAnt model. Defines the number of different tokens that can be represented by the
`input` passed when calling [`CpmAntModel`].
hidden_size (`int`, *optional*, defaults to 4096):
Dimension of the encoder layers.
num_attention_heads (`int`, *optional*, defaults to 32):
Number of attention heads in the Transformer encoder.
dim_head (`int`, *optional*, defaults to 128):
Dimension of attention heads for each attention layer in the Transformer encoder.
dim_ff (`int`, *optional*, defaults to 10240):
Dimension of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
num_hidden_layers (`int`, *optional*, defaults to 48):
Number of layers of the Transformer encoder.
dropout_p (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder.
position_bias_num_buckets (`int`, *optional*, defaults to 512):
The number of position_bias buckets.
position_bias_max_distance (`int`, *optional*, defaults to 2048):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
eps (`float`, *optional*, defaults to 1e-06):
The epsilon used by the layer normalization layers.
init_std (`float`, *optional*, defaults to 1.0):
Initialize parameters with std = init_std.
prompt_types (`int`, *optional*, defaults to 32):
The type of prompt.
prompt_length (`int`, *optional*, defaults to 32):
The length of prompt.
segment_types (`int`, *optional*, defaults to 32):
The type of segment.
use_cache (`bool`, *optional*, defaults to `True`):
Whether to use cache.
Example:
```python
>>> from transformers import CpmAntModel, CpmAntConfig
>>> # Initializing a CPMAnt cpm-ant-10b style configuration
>>> configuration = CpmAntConfig()
>>> # Initializing a model from the cpm-ant-10b style configuration
>>> model = CpmAntModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "cpmant"
def __init__(
self,
vocab_size: int = 30720,
hidden_size: int = 4096,
num_attention_heads: int = 32,
dim_head: int = 128,
dim_ff: int = 10240,
num_hidden_layers: int = 48,
dropout_p: int = 0.0,
position_bias_num_buckets: int = 512,
position_bias_max_distance: int = 2048,
eps: int = 1e-6,
init_std: float = 1.0,
prompt_types: int = 32,
prompt_length: int = 32,
segment_types: int = 32,
use_cache: bool = True,
**kwargs,
):
super().__init__(**kwargs)
self.prompt_types = prompt_types
self.prompt_length = prompt_length
self.segment_types = segment_types
self.hidden_size = hidden_size
self.num_attention_heads = num_attention_heads
self.dim_head = dim_head
self.dim_ff = dim_ff
self.num_hidden_layers = num_hidden_layers
self.position_bias_num_buckets = position_bias_num_buckets
self.position_bias_max_distance = position_bias_max_distance
self.dropout_p = dropout_p
self.eps = eps
self.use_cache = use_cache
self.vocab_size = vocab_size
self.init_std = init_std | class_definition | 804 | 5,115 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/configuration_cpmant.py | null | 4,272 |
class CpmAntLayerNorm(nn.Module):
"""
We use Root Mean Square (RMS) Layer Normalization, please see https://arxiv.org/abs/1910.07467 for details."
"""
def __init__(self, config: CpmAntConfig):
super().__init__()
self.eps = config.eps
self.dim_norm = config.hidden_size
self.weight = nn.Parameter(torch.empty(config.hidden_size))
def forward(self, hidden_states: torch.Tensor):
"""
Args:
hidden_states (`torch.Tensor` of shape `(batch, seq_len, dim_in)`)
"""
if hidden_states.size(-1) != self.dim_norm:
raise AssertionError("hidden_states.size(-1) != self.dim_norm")
old_dtype = hidden_states.dtype
variance = hidden_states.to(torch.float32).pow(2).mean(dim=-1, keepdim=True)
hidden_states = (hidden_states * torch.rsqrt(variance + self.eps)).to(old_dtype) * self.weight
return hidden_states | class_definition | 1,352 | 2,285 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,273 |
class CpmAntAttention(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.dim_model = config.hidden_size
self.num_heads = config.num_attention_heads
self.dim_head = config.dim_head
self.project_q = nn.Linear(self.dim_model, self.num_heads * self.dim_head, bias=False)
self.project_k = nn.Linear(self.dim_model, self.num_heads * self.dim_head, bias=False)
self.project_v = nn.Linear(self.dim_model, self.num_heads * self.dim_head, bias=False)
self.attention_out = nn.Linear(self.num_heads * self.dim_head, self.dim_model, bias=False)
self.softmax = torch.nn.Softmax(dim=-1)
if config.dropout_p is not None:
self.dropout = torch.nn.Dropout(p=config.dropout_p)
else:
self.dropout = None
def forward(
self,
hidden_q: torch.Tensor,
hidden_kv: torch.Tensor,
attention_mask: torch.BoolTensor,
position_bias: torch.Tensor,
output_attentions: Optional[bool] = False,
past_key_values: Optional[Tuple[torch.Tensor, torch.Tensor]] = None,
use_cache: Optional[bool] = None,
):
"""
Args:
hidden_q (`torch.Tensor`):
Input of transformer block(self-attention block). It can be the raw embedding of a batch of sequences.
hidden_kv (`torch.Tensor` of shape `(batch, len_k, dim_model)`)):
Tensor *key_value* and *query* of shape `(batch, len_k, dim_model)`
attention_mask (`torch.Tensor` of shape `(batch, len_seq, len_seq)`):
Avoid invalid areas to participate in the calculation of self-attention.
position_bias (`torch.Tensor` of shape `(batch, len_seq, len_seq)`):
Provide positional information to self-attention block.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
past_key_values (`Tuple[torch.Tensor, torch.Tensor]`, *optional*):
Cached past key and value projection states.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
"""
batch_size = hidden_q.size(0)
len_q = hidden_q.size(1)
len_k = hidden_kv.size(1)
query = self.project_q(hidden_q)
key = self.project_k(hidden_kv)
value = self.project_v(hidden_kv)
query = query.view(batch_size, len_q, self.num_heads, self.dim_head).permute(0, 2, 1, 3)
key = key.view(batch_size, len_k, self.num_heads, self.dim_head).permute(0, 2, 1, 3)
value = value.view(batch_size, len_k, self.num_heads, self.dim_head).permute(0, 2, 1, 3)
if past_key_values is not None:
key = torch.cat([past_key_values[0], key], dim=-2)
value = torch.cat([past_key_values[1], value], dim=-2)
len_k = key.size(-2)
# (batch_size, num_heads, len_q, dim_head) @ (batch_size, num_heads, dim_head, len_k) -> (batch_size, num_heads, len_q, len_k)
score = torch.matmul(query, key.transpose(-1, -2)) / math.sqrt(self.dim_head)
score = score + position_bias
score = torch.masked_fill(
score,
attention_mask.view(batch_size, 1, len_q, len_k) == torch.tensor(False),
torch.scalar_tensor(float("-inf"), device=score.device, dtype=score.dtype),
)
score = self.softmax(score)
score = torch.masked_fill(
score,
attention_mask.view(batch_size, 1, len_q, len_k) == torch.tensor(False),
torch.scalar_tensor(0, device=score.device, dtype=score.dtype),
)
if output_attentions:
attn_weights = score
else:
attn_weights = None
if self.dropout is not None:
score = self.dropout(score)
# (batch_size, num_heads, len_q, len_k) @ (batch_size, num_heads, len_k, dim_head) -> (batch_size, num_heads, len_q, dim_head)
score = torch.matmul(score, value)
score = score.view(batch_size, self.num_heads, len_q, self.dim_head).permute(0, 2, 1, 3)
score = score.contiguous().view(batch_size, len_q, self.num_heads * self.dim_head)
score = self.attention_out(score)
past_key_values = None
if use_cache:
past_key_values = (key, value)
return score, attn_weights, past_key_values | class_definition | 2,288 | 6,866 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,274 |
class CpmAntSelfAttentionBlock(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.layernorm_before_attention = CpmAntLayerNorm(config)
self.self_attention = CpmAntAttention(config)
if config.dropout_p:
self.dropout = torch.nn.Dropout(config.dropout_p)
else:
self.dropout = None
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
position_bias: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
past_key_values: Optional[Tuple[torch.Tensor, torch.Tensor]] = None,
use_cache: Optional[bool] = None,
):
"""
Args:
hidden_states (`torch.Tensor` of shape `(batch, len_seq, dim_model)`):
Input of transformer block(self-attention block). It can be the raw embedding of a batch of sequences.
attention_mask (`torch.Tensor` of shape `(batch, len_seq, len_seq)`):
Avoid invalid areas to participate in the calculation of self-attention.
position_bias (`torch.Tensor` of shape `(batch, len_seq, len_seq)`):
Provide positional information to self-attention block.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
past_key_values (`Tuple(torch.FloatTensor)`, *optional*):
Cached past key and value projection states.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
"""
outputs = self.layernorm_before_attention(hidden_states)
outputs = self.self_attention(
outputs, outputs, attention_mask, position_bias, output_attentions, past_key_values, use_cache
)
outputs, attn_weights, current_key_value = outputs
if self.dropout is not None:
outputs = self.dropout(outputs)
hidden_states = hidden_states + outputs
return hidden_states, attn_weights, current_key_value | class_definition | 6,869 | 9,093 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,275 |
class CpmAntDenseGatedACT(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.w_0 = nn.Linear(config.hidden_size, config.dim_ff, bias=False)
self.w_1 = nn.Linear(config.hidden_size, config.dim_ff, bias=False)
self.act = torch.nn.GELU()
def forward(self, hidden_states: torch.Tensor):
"""Transform an input tensor from one feature space to another via a nonlinear operation
Args:
hidden_states (`torch.Tensor` of shape `(batch, seq_len, dim_in)`)
"""
gate_score = self.act(self.w_0(hidden_states))
hidden_states = self.w_1(hidden_states)
hidden_states = gate_score * hidden_states
return hidden_states | class_definition | 9,096 | 9,833 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,276 |
class CpmAntFeedForward(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.w_in = CpmAntDenseGatedACT(config)
if config.dropout_p is not None:
self.dropout = torch.nn.Dropout(config.dropout_p)
else:
self.dropout = None
self.w_out = nn.Linear(config.dim_ff, config.hidden_size, bias=False)
def forward(self, hidden_states: torch.Tensor):
"""
Args:
hidden_states (`torch.Tensor` of shape `(batch, seq_len, dim_in)`)
"""
hidden_states = self.w_in(hidden_states)
if self.dropout is not None:
hidden_states = self.dropout(hidden_states)
hidden_states = self.w_out(hidden_states)
return hidden_states | class_definition | 9,836 | 10,614 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,277 |
class CpmAntFFNBlock(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.layernorm_before_ffn = CpmAntLayerNorm(config)
self.ffn = CpmAntFeedForward(config)
if config.dropout_p:
self.dropout = torch.nn.Dropout(config.dropout_p)
else:
self.dropout = None
def forward(
self,
hidden_states: torch.Tensor,
):
"""
Args:
hidden_states (`torch.Tensor` of shape `(batch, len_seq, dim_model)`):
Hidden states before feed forward layer.
"""
ln_outputs = self.layernorm_before_ffn(hidden_states)
outputs = self.ffn(ln_outputs)
if self.dropout is not None:
outputs = self.dropout(outputs)
hidden_states = hidden_states + outputs
return hidden_states | class_definition | 10,617 | 11,477 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,278 |
class CpmAntTransformerBlock(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.self_att = CpmAntSelfAttentionBlock(config)
self.ffn = CpmAntFFNBlock(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
position_bias: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
past_key_values: Optional[Tuple[torch.Tensor, torch.Tensor]] = None,
use_cache: Optional[bool] = None,
):
"""
Args:
hidden_states (`torch.Tensor`):
Input to the layer of shape `(batch, seq_len, dim_model)`
attention_mask (`torch.Tensor`):
Avoid invalid areas to participate in the calculation of shape `(batch, seq_len, seq_len)`
position_bias (`torch.Tensor`):
Provides position information to attention mechanism of shape `(num_heads, seq_len, seq_len)`
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
past_key_values (`Tuple[torch.Tensor, torch.Tensor])`, *optional*):
Cached past key and value projection states
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
"""
hidden_states = self.self_att(
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
past_key_values=past_key_values,
use_cache=use_cache,
)
hidden_states, attn_weights, current_key_value = hidden_states
hidden_states = self.ffn(hidden_states)
return hidden_states, attn_weights, current_key_value | class_definition | 11,480 | 13,448 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,279 |
class CpmAntEncoder(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.num_layers = config.num_hidden_layers
self.layers = nn.ModuleList([CpmAntTransformerBlock(config) for ith in range(self.num_layers)])
self.output_layernorm = CpmAntLayerNorm(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
position_bias: torch.Tensor,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
past_key_values: Optional[Tuple[torch.Tensor, torch.Tensor]] = None,
use_cache: Optional[bool] = None,
):
"""
Args:
hidden_states (`torch.Tensor`):
Input to the layer of shape `(batch, seq_len, dim_model)`
attention_mask (`torch.Tensor`):
Avoid invalid areas to participate in the calculation of shape `(batch, seq_len, seq_len)`
position_bias (`torch.Tensor`):
Provides position information to attention mechanism of shape `(num_heads, seq_len, seq_len)`
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers.
past_key_values (`Tuple[torch.Tensor, torch.Tensor])`, *optional*):
Cached past key and value projection states
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
"""
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
current_key_values = () if use_cache else None
for i, layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
layer_outputs = layer(
hidden_states,
attention_mask,
position_bias,
output_attentions=output_attentions,
past_key_values=past_key_values[i] if past_key_values else None,
use_cache=use_cache,
)
hidden_states, attn_weights, current_key_value = layer_outputs
if output_attentions:
all_self_attns += (attn_weights,)
if current_key_value is not None:
current_key_values = current_key_values + (current_key_value,)
hidden_states = self.output_layernorm(hidden_states)
if output_hidden_states:
all_hidden_states += (hidden_states,)
return hidden_states, current_key_values, all_hidden_states, all_self_attns | class_definition | 13,451 | 16,364 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,280 |
class CpmAntIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states | class_definition | 16,455 | 17,022 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,281 |
class CpmAntSegmentPositionEmbedding(nn.Module):
def __init__(self, config: CpmAntConfig):
super().__init__()
self.num_heads = config.num_attention_heads
self.num_buckets = config.position_bias_num_buckets
self.max_distance = config.position_bias_max_distance
self.num_segments = config.segment_types
self.relative_attention_bias = nn.Parameter(
torch.empty(
config.segment_types * config.segment_types + config.position_bias_num_buckets,
config.num_attention_heads,
)
)
def forward(
self,
key_pos: torch.Tensor,
query_pos: torch.Tensor,
key_segment: torch.Tensor,
query_segment: torch.Tensor,
):
with torch.no_grad():
batch = key_pos.size(0)
keylen = key_pos.size(1)
querylen = query_pos.size(1)
if key_pos.size(0) != query_pos.size(0):
raise AssertionError(
f"key_pos.size(0) should be equal to query_pos.size(0), but got {key_pos.size(0)} and {query_pos.size(0)}!"
)
if keylen != key_segment.size(1) or querylen != query_segment.size(1):
raise AssertionError(
f"keylen should be equal to key_segment.size(1), but got {keylen} and {key_segment.size(1)}!"
)
if querylen != query_segment.size(1):
raise AssertionError(
f"querylen should be equal to query_segment.size(1), but got {querylen} and {query_segment.szie(1)}!"
)
key_pos = key_pos.view(batch, -1, keylen)
query_pos = query_pos.view(batch, querylen, -1)
key_segment = key_segment.view(batch, -1, keylen)
query_segment = query_segment.view(batch, querylen, -1)
relative_position_bucket = self._segment_relative_position_bucket(query_segment, key_segment)
relative_position_bucket = relative_position_bucket + self.num_buckets
# (batch, len_q, len_k)
absolute_position_bucket = self._position_bucket(
torch.arange(keylen, dtype=torch.int32, device=relative_position_bucket.device)[None, :]
- torch.arange(querylen, dtype=torch.int32, device=relative_position_bucket.device)[:, None],
num_buckets=self.num_buckets,
max_distance=self.max_distance,
)
relative_position_bucket = torch.where(
(key_segment == query_segment),
absolute_position_bucket[None, :, :],
relative_position_bucket,
)
# (batch, len_q, len_k, num_heads)
embeds = F.embedding(relative_position_bucket, self.relative_attention_bias)
# (batch, num_heads, len_q, len_k)
embeds = embeds.permute(0, 3, 1, 2).contiguous()
return embeds
def _segment_relative_position_bucket(self, query_segment, key_segment):
return query_segment * self.num_segments + key_segment
def _position_bucket(self, relative_position, num_buckets=32, max_distance=128):
relative_buckets = 0
# always bidirectional in CPMAnt
num_buckets //= 2
relative_buckets = (relative_position > 0).to(torch.int32) * num_buckets
relative_position = torch.abs(relative_position)
max_exact = num_buckets // 2
is_small = relative_position < max_exact
relative_postion_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.int32)
relative_postion_if_large = torch.min(
relative_postion_if_large,
torch.full_like(relative_postion_if_large, num_buckets - 1),
)
relative_buckets += torch.where(is_small, relative_position.to(torch.int32), relative_postion_if_large)
return relative_buckets | class_definition | 17,025 | 21,055 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,282 |
class CpmAntOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states | class_definition | 21,140 | 21,750 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,283 |
class CpmAntPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CpmAntConfig
base_model_prefix = "cpmant"
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, CpmAntLayerNorm):
module.weight.data.fill_(1.0)
elif isinstance(module, CpmAntSegmentPositionEmbedding):
module.relative_attention_bias.data.normal_(mean=0.0, std=self.config.init_std) | class_definition | 21,753 | 22,889 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,284 |
class CpmAntModel(CpmAntPreTrainedModel):
def __init__(self, config: CpmAntConfig):
super().__init__(config)
self.encoder = CpmAntEncoder(config)
self.segment_embedding = nn.Embedding(config.segment_types, config.hidden_size)
self.input_embedding = nn.Embedding(
config.vocab_size + config.prompt_types * config.prompt_length, config.hidden_size
)
self.position_bias = CpmAntSegmentPositionEmbedding(config)
self.prompt_length = config.prompt_length
self.vocab_size = config.vocab_size
self.post_init()
def get_input_embeddings(self):
return self.input_embedding
def set_input_embeddings(self, embeddings, **kwargs):
self.input_embedding = embeddings
def _prepare_attention_mask(self, input_ids, span, context, length):
batch = input_ids.size(0)
seqlen = input_ids.size(1)
device = input_ids.device
directional_mask_2d = torch.arange(seqlen, device=device) <= torch.arange(seqlen, device=device).view(-1, 1)
attention_mask = context[:, None, :] | (
context[:, :, None].logical_not() & directional_mask_2d.view(1, seqlen, seqlen)
)
attention_mask = attention_mask & (span[:, None, :] == span[:, :, None])
# mask for left padding
mask_1d = (
torch.tensor(list(range(seqlen - self.prompt_length))[::-1], device=device)[None, :].repeat(batch, 1)
< length[:, None]
)
mask_1d = torch.cat((torch.ones(batch, self.prompt_length, device=device).bool(), mask_1d), dim=1)
attention_mask = mask_1d.view(batch, seqlen, 1) & mask_1d.view(batch, 1, seqlen) & attention_mask
return attention_mask
@add_start_docstrings_to_model_forward(CPMANT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
use_cache: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPast]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
use_cache = use_cache if use_cache is not None else self.config.use_cache
# add prompts ahead
if input_ids.dtype != torch.int32:
input_ids = input_ids.to(torch.int32)
dtype, device = input_ids.dtype, input_ids.device
segment = torch.where(input_ids != 0, 2, 0).to(dtype=dtype, device=device)
length = (segment != 0).sum(-1).to(dtype=dtype, device=device)
input_ids = torch.cat(
(
torch.arange(
self.prompt_length * 2 + self.vocab_size,
self.prompt_length * 3 + self.vocab_size,
dtype=dtype,
device=device,
).repeat(input_ids.size(0), 1),
input_ids,
),
dim=1,
)
batch, seq_length = input_ids.size()
segment = torch.cat((torch.zeros(batch, self.prompt_length, dtype=dtype, device=device), segment), dim=1)
context = torch.full((batch, seq_length), 1, dtype=dtype, device=device)
position = torch.arange(seq_length, dtype=dtype, device=device).repeat(batch, 1)
span = torch.full((batch, seq_length), 0, dtype=dtype, device=device)
if past_key_values is None:
past_length = 0
past_key_values = tuple([None] * self.encoder.num_layers)
input_ids = input_ids.contiguous()
hidden_states = self.input_embedding(input_ids)
segment_states = self.segment_embedding(segment)
hidden_states = hidden_states + segment_states
else:
past_length = past_key_values[0][0].size(-2)
segment_states = self.segment_embedding(segment)
hidden_states = self.input_embedding(input_ids) + segment_states[:, -1:, :]
attention_mask = self._prepare_attention_mask(input_ids, span, context, length)
position_bias = self.position_bias(position, position, segment, segment)
attention_mask = attention_mask[:, past_length:, :]
position_bias = position_bias[:, :, past_length:, :]
hidden_states = hidden_states[:, past_length:, :]
hidden_states, present_key_values, all_hidden_states, all_attentions = self.encoder(
hidden_states,
attention_mask,
position_bias,
output_attentions,
output_hidden_states,
past_key_values,
use_cache,
)
if past_length == 0:
hidden_states = hidden_states[:, self.prompt_length :, :]
# drop the prompt
if all_attentions is not None:
new_attentions = ()
for attention in all_attentions:
new_attentions += (attention[:, :, self.prompt_length :, self.prompt_length :],)
all_attentions = new_attentions
if all_hidden_states is not None:
new_hidden_states = ()
for hidden_state in all_hidden_states:
new_hidden_states += (hidden_state[:, self.prompt_length :, :],)
all_hidden_states = new_hidden_states
if not return_dict:
return tuple(
v for v in [hidden_states, present_key_values, all_hidden_states, all_attentions] if v is not None
)
return BaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=present_key_values,
hidden_states=all_hidden_states,
attentions=all_attentions,
) | class_definition | 24,991 | 31,282 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,285 |
class CpmAntForCausalLM(CpmAntPreTrainedModel, GenerationMixin):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config: CpmAntConfig):
super().__init__(config)
self.cpmant = CpmAntModel(config)
# lm_head.weight is tied to cpmant.input_embedding.weight
self.lm_head = nn.Linear(
config.hidden_size, config.vocab_size + config.prompt_types * config.prompt_length, bias=False
)
self.post_init()
@add_start_docstrings_to_model_forward(CPMANT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
past_key_values: Optional[List[Tuple[torch.Tensor, torch.Tensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
labels: Optional[torch.Tensor] = None,
return_dict: Optional[bool] = None,
attention_mask: Optional[torch.Tensor] = None, # dummy parameter for text-generation pipeline
**kwargs,
) -> Union[Tuple, CausalLMOutputWithPast]:
r"""
Args:
input_ids (`torch.Tensor` of shape `(batch_size, seq_len)`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`CPMAntTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers.
labels (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
CPMAnt will process attention mask automatically, this parameter is a dummy parameter for
text-generation pipeline.
Example:
Text Generation with CpmAntForCausalLM.
```python
>>> from transformers import CPMAntTokenizer, CpmAntForCausalLM
>>> texts = "今天天气不错，"
>>> model = CpmAntForCausalLM.from_pretrained("openbmb/cpm-ant-10b")
>>> tokenizer = CPMAntTokenizer.from_pretrained("openbmb/cpm-ant-10b")
>>> input_ids = tokenizer(texts, return_tensors="pt")
>>> outputs = model.generate(**input_ids)
>>> output_texts = tokenizer.batch_decode(outputs)
>>> print(output_texts)
['今天天气不错，阳光明媚，我和妈妈一起去超市买东西。\n在超市里，我看到了一个很好玩的玩具，它的名字叫“机器人”。它有一个圆圆的脑袋，两只圆圆的眼睛，还有一个圆圆的']
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
model_output = self.cpmant(
input_ids, output_attentions, output_hidden_states, past_key_values, use_cache, return_dict
)
hidden_states = model_output.last_hidden_state if return_dict else model_output[0]
logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
loss_func = CrossEntropyLoss()
loss = loss_func(logits.view(-1, logits.size(-1)), labels.view(-1))
if not return_dict:
output = (logits,) + model_output[1:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutputWithPast(
loss=loss,
logits=logits,
past_key_values=model_output.past_key_values,
hidden_states=model_output.hidden_states,
attentions=model_output.attentions,
)
def get_input_embeddings(self):
return self.cpmant.input_embedding
def set_input_embeddings(self, embeddings):
self.cpmant.input_embedding = embeddings
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def _reorder_cache(self, past_key_values, beam_idx):
past_key_values = [list(each) if each is not None else each for each in past_key_values]
for key_value_layer in past_key_values:
key_value_layer[0] = key_value_layer[0][beam_idx]
key_value_layer[1] = key_value_layer[1][beam_idx]
return past_key_values | class_definition | 31,471 | 37,037 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/cpmant/modeling_cpmant.py | null | 4,286 |
class TFLEDLearnedPositionalEmbedding(keras.layers.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int, **kwargs):
super().__init__(num_embeddings, embedding_dim, **kwargs)
def call(self, input_shape: tf.TensorShape, past_key_values_length: int = 0):
"""Input is expected to be of size [bsz x seqlen]."""
seq_len = input_shape[1]
position_ids = tf.range(seq_len, delta=1, name="range")
position_ids += past_key_values_length
return super().call(tf.cast(position_ids, dtype=tf.int32)) | class_definition | 4,036 | 4,686 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,287 |
class TFLEDEncoderSelfAttention(keras.layers.Layer):
def __init__(self, config, layer_id, **kwargs):
super().__init__(**kwargs)
self.config = config
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads}"
)
self.num_heads = config.num_attention_heads
self.head_dim = int(config.hidden_size / config.num_attention_heads)
self.embed_dim = config.hidden_size
self.query = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="query",
)
self.key = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="key",
)
self.value = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="value",
)
# separate projection layers for tokens with global attention
self.query_global = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="query_global",
)
self.key_global = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="key_global",
)
self.value_global = keras.layers.Dense(
self.embed_dim,
kernel_initializer=get_initializer(config.initializer_range),
name="value_global",
)
self.dropout = keras.layers.Dropout(config.attention_probs_dropout_prob)
self.global_dropout = keras.layers.Dropout(config.attention_probs_dropout_prob)
self.layer_id = layer_id
attention_window = config.attention_window[self.layer_id]
assert (
attention_window % 2 == 0
), f"`attention_window` for layer {self.layer_id} has to be an even value. Given {attention_window}"
assert (
attention_window > 0
), f"`attention_window` for layer {self.layer_id} has to be positive. Given {attention_window}"
self.one_sided_attn_window_size = attention_window // 2
def build(self, input_shape=None):
if not self.built:
with tf.name_scope("query_global"):
self.query_global.build((self.config.hidden_size,))
with tf.name_scope("key_global"):
self.key_global.build((self.config.hidden_size,))
with tf.name_scope("value_global"):
self.value_global.build((self.config.hidden_size,))
if self.built:
return
self.built = True
if getattr(self, "query", None) is not None:
with tf.name_scope(self.query.name):
self.query.build([None, None, self.config.hidden_size])
if getattr(self, "key", None) is not None:
with tf.name_scope(self.key.name):
self.key.build([None, None, self.config.hidden_size])
if getattr(self, "value", None) is not None:
with tf.name_scope(self.value.name):
self.value.build([None, None, self.config.hidden_size])
if getattr(self, "query_global", None) is not None:
with tf.name_scope(self.query_global.name):
self.query_global.build([None, None, self.config.hidden_size])
if getattr(self, "key_global", None) is not None:
with tf.name_scope(self.key_global.name):
self.key_global.build([None, None, self.config.hidden_size])
if getattr(self, "value_global", None) is not None:
with tf.name_scope(self.value_global.name):
self.value_global.build([None, None, self.config.hidden_size])
def call(
self,
inputs,
training=False,
):
"""
LongformerSelfAttention expects *len(hidden_states)* to be multiple of *attention_window*. Padding to
*attention_window* happens in LongformerModel.forward to avoid redoing the padding on each layer.
The *attention_mask* is changed in [`LongformerModel.forward`] from 0, 1, 2 to:
- -10000: no attention
- 0: local attention
- +10000: global attention
"""
# retrieve input args
(
hidden_states,
attention_mask,
layer_head_mask,
is_index_masked,
is_index_global_attn,
is_global_attn,
) = inputs
# project hidden states
query_vectors = self.query(hidden_states)
key_vectors = self.key(hidden_states)
value_vectors = self.value(hidden_states)
batch_size, seq_len, embed_dim = shape_list(hidden_states)
tf.debugging.assert_equal(
embed_dim,
self.embed_dim,
message=f"hidden_states should have embed_dim = {self.embed_dim}, but has {embed_dim}",
)
# normalize query
query_vectors /= tf.math.sqrt(tf.cast(self.head_dim, dtype=query_vectors.dtype))
query_vectors = tf.reshape(query_vectors, (batch_size, seq_len, self.num_heads, self.head_dim))
key_vectors = tf.reshape(key_vectors, (batch_size, seq_len, self.num_heads, self.head_dim))
# attn_probs = (batch_size, seq_len, num_heads, window*2+1)
attn_scores = self._sliding_chunks_query_key_matmul(
query_vectors, key_vectors, self.one_sided_attn_window_size
)
# values to pad for attention probs
remove_from_windowed_attention_mask = attention_mask != 0
# cast to fp32/fp16 then replace 1's with -inf
float_mask = tf.cast(remove_from_windowed_attention_mask, dtype=query_vectors.dtype) * LARGE_NEGATIVE
# diagonal mask with zeros everywhere and -inf inplace of padding
diagonal_mask = self._sliding_chunks_query_key_matmul(
tf.ones(shape_list(attention_mask)),
float_mask,
self.one_sided_attn_window_size,
)
# pad local attention probs
attn_scores += diagonal_mask
tf.debugging.assert_equal(
shape_list(attn_scores),
[batch_size, seq_len, self.num_heads, self.one_sided_attn_window_size * 2 + 1],
message=(
f"attn_probs should be of size ({batch_size}, {seq_len}, {self.num_heads},"
f" {self.one_sided_attn_window_size * 2 + 1}), but is of size {shape_list(attn_scores)}"
),
)
# compute global attn indices required through out forward fn
(
max_num_global_attn_indices,
is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero,
) = self._get_global_attn_indices(is_index_global_attn)
# this function is only relevant for global attention
if is_global_attn:
attn_scores = self._concat_with_global_key_attn_probs(
attn_scores=attn_scores,
query_vectors=query_vectors,
key_vectors=key_vectors,
max_num_global_attn_indices=max_num_global_attn_indices,
is_index_global_attn_nonzero=is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero=is_local_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero=is_local_index_no_global_attn_nonzero,
)
attn_probs = stable_softmax(attn_scores, axis=-1)
# softmax sometimes inserts NaN if all positions are masked, replace them with 0
# Make sure to create a mask with the proper shape:
# if is_global_attn==True => [batch_size, seq_len, self.num_heads, self.one_sided_attn_window_size * 2 + max_num_global_attn_indices + 1]
# if is_global_attn==False => [batch_size, seq_len, self.num_heads, self.one_sided_attn_window_size * 2 + 1]
if is_global_attn:
masked_index = tf.tile(
is_index_masked[:, :, None, None],
(1, 1, self.num_heads, self.one_sided_attn_window_size * 2 + max_num_global_attn_indices + 1),
)
else:
masked_index = tf.tile(
is_index_masked[:, :, None, None],
(1, 1, self.num_heads, self.one_sided_attn_window_size * 2 + 1),
)
attn_probs = tf.where(
masked_index,
tf.zeros(shape_list(masked_index), dtype=attn_probs.dtype),
attn_probs,
)
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
attn_probs = tf.reshape(layer_head_mask, (1, 1, -1, 1)) * attn_probs
# apply dropout
attn_probs = self.dropout(attn_probs, training=training)
value_vectors = tf.reshape(value_vectors, (batch_size, seq_len, self.num_heads, self.head_dim))
# if global attention, compute sum of global and local attn
if is_global_attn:
attn_output = self._compute_attn_output_with_global_indices(
value_vectors=value_vectors,
attn_probs=attn_probs,
max_num_global_attn_indices=max_num_global_attn_indices,
is_index_global_attn_nonzero=is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero=is_local_index_global_attn_nonzero,
)
else:
attn_output = self._sliding_chunks_matmul_attn_probs_value(
attn_probs, value_vectors, self.one_sided_attn_window_size
)
tf.debugging.assert_equal(
shape_list(attn_output), [batch_size, seq_len, self.num_heads, self.head_dim], message="Unexpected size"
)
attn_output = tf.reshape(attn_output, (batch_size, seq_len, embed_dim))
# compute value for global attention and overwrite to attention output
if is_global_attn:
attn_output, global_attn_probs = self._compute_global_attn_output_from_hidden(
attn_output=attn_output,
hidden_states=hidden_states,
max_num_global_attn_indices=max_num_global_attn_indices,
layer_head_mask=layer_head_mask,
is_local_index_global_attn_nonzero=is_local_index_global_attn_nonzero,
is_index_global_attn_nonzero=is_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero=is_local_index_no_global_attn_nonzero,
is_index_masked=is_index_masked,
training=training,
)
else:
# Leave attn_output unchanged
global_attn_probs = tf.zeros((batch_size, self.num_heads, max_num_global_attn_indices, seq_len))
# make sure that local attention probabilities are set to 0 for indices of global attn
# Make sure to create a mask with the proper shape:
# if is_global_attn==True => [batch_size, seq_len, self.num_heads, self.one_sided_attn_window_size * 2 + max_num_global_attn_indices + 1]
# if is_global_attn==False => [batch_size, seq_len, self.num_heads, self.one_sided_attn_window_size * 2 + 1]
if is_global_attn:
masked_global_attn_index = tf.tile(
is_index_global_attn[:, :, None, None],
(1, 1, self.num_heads, self.one_sided_attn_window_size * 2 + max_num_global_attn_indices + 1),
)
else:
masked_global_attn_index = tf.tile(
is_index_global_attn[:, :, None, None],
(1, 1, self.num_heads, self.one_sided_attn_window_size * 2 + 1),
)
attn_probs = tf.where(
masked_global_attn_index,
tf.zeros(shape_list(masked_global_attn_index), dtype=attn_probs.dtype),
attn_probs,
)
outputs = (attn_output, attn_probs, global_attn_probs)
return outputs
def _sliding_chunks_query_key_matmul(self, query, key, window_overlap):
"""
Matrix multiplication of query and key tensors using with a sliding window attention pattern. This
implementation splits the input into overlapping chunks of size 2w (e.g. 512 for pretrained Longformer) with an
overlap of size window_overlap
"""
batch_size, seq_len, num_heads, head_dim = shape_list(query)
tf.debugging.assert_equal(
seq_len % (window_overlap * 2),
0,
message=f"Sequence length should be multiple of {window_overlap * 2}. Given {seq_len}",
)
tf.debugging.assert_equal(
shape_list(query),
shape_list(key),
message=(
f"Shape of query and key should be equal, but got query: {shape_list(query)} and key:"
f" {shape_list(key)}"
),
)
chunks_count = seq_len // window_overlap - 1
# group batch_size and num_heads dimensions into one, then chunk seq_len into chunks of size window_overlap * 2
query = tf.reshape(
tf.transpose(query, (0, 2, 1, 3)),
(batch_size * num_heads, seq_len, head_dim),
)
key = tf.reshape(tf.transpose(key, (0, 2, 1, 3)), (batch_size * num_heads, seq_len, head_dim))
chunked_query = self._chunk(query, window_overlap)
chunked_key = self._chunk(key, window_overlap)
# matrix multiplication
# bcxd: batch_size * num_heads x chunks x 2window_overlap x head_dim
# bcyd: batch_size * num_heads x chunks x 2window_overlap x head_dim
# bcxy: batch_size * num_heads x chunks x 2window_overlap x 2window_overlap
chunked_query = tf.cast(chunked_query, dtype=chunked_key.dtype)
chunked_attention_scores = tf.einsum("bcxd,bcyd->bcxy", chunked_query, chunked_key) # multiply
# convert diagonals into columns
paddings = tf.convert_to_tensor([[0, 0], [0, 0], [0, 1], [0, 0]])
diagonal_chunked_attention_scores = self._pad_and_transpose_last_two_dims(chunked_attention_scores, paddings)
# allocate space for the overall attention matrix where the chunks are combined. The last dimension
# has (window_overlap * 2 + 1) columns. The first (window_overlap) columns are the window_overlap lower triangles (attention from a word to
# window_overlap previous words). The following column is attention score from each word to itself, then
# followed by window_overlap columns for the upper triangle.
# copy parts from diagonal_chunked_attention_scores into the combined matrix of attentions
# - copying the main diagonal and the upper triangle
# TODO: This code is most likely not very efficient and should be improved
diagonal_attn_scores_up_triang = tf.concat(
[
diagonal_chunked_attention_scores[:, :, :window_overlap, : window_overlap + 1],
diagonal_chunked_attention_scores[:, -1:, window_overlap:, : window_overlap + 1],
],
axis=1,
)
# - copying the lower triangle
diagonal_attn_scores_low_triang = tf.concat(
[
tf.zeros(
(batch_size * num_heads, 1, window_overlap, window_overlap),
dtype=diagonal_chunked_attention_scores.dtype,
),
diagonal_chunked_attention_scores[:, :, -(window_overlap + 1) : -1, window_overlap + 1 :],
],
axis=1,
)
diagonal_attn_scores_first_chunk = tf.concat(
[
tf.roll(
diagonal_chunked_attention_scores,
shift=[1, window_overlap],
axis=[2, 3],
)[:, :, :window_overlap, :window_overlap],
tf.zeros(
(batch_size * num_heads, 1, window_overlap, window_overlap),
dtype=diagonal_chunked_attention_scores.dtype,
),
],
axis=1,
)
first_chunk_mask = (
tf.tile(
tf.range(chunks_count + 1, dtype=tf.int64)[None, :, None, None],
(batch_size * num_heads, 1, window_overlap, window_overlap),
)
< 1
)
diagonal_attn_scores_low_triang = tf.where(
first_chunk_mask,
diagonal_attn_scores_first_chunk,
diagonal_attn_scores_low_triang,
)
# merging upper and lower triangle
diagonal_attention_scores = tf.concat(
[diagonal_attn_scores_low_triang, diagonal_attn_scores_up_triang], axis=-1
)
# separate batch_size and num_heads dimensions again
diagonal_attention_scores = tf.transpose(
tf.reshape(
diagonal_attention_scores,
(batch_size, num_heads, seq_len, 2 * window_overlap + 1),
),
(0, 2, 1, 3),
)
diagonal_attention_scores = self._mask_invalid_locations(diagonal_attention_scores, window_overlap)
return diagonal_attention_scores
@staticmethod
def _mask_invalid_locations(input_tensor, window_overlap):
# create correct upper triangle bool mask
mask_2d_upper = tf.reverse(
tf.linalg.band_part(tf.ones(shape=(window_overlap, window_overlap + 1)), -1, 0),
axis=[0],
)
# pad to full matrix
padding = tf.convert_to_tensor(
[[0, shape_list(input_tensor)[1] - window_overlap], [0, shape_list(input_tensor)[3] - window_overlap - 1]]
)
# create lower mask
mask_2d = tf.pad(mask_2d_upper, padding)
# combine with upper mask
mask_2d = mask_2d + tf.reverse(mask_2d, axis=[0, 1])
# broadcast to full matrix
mask_4d = tf.tile(mask_2d[None, :, None, :], (shape_list(input_tensor)[0], 1, 1, 1))
# inf tensor used for masking
inf_tensor = -float("inf") * tf.ones_like(input_tensor)
# mask
input_tensor = tf.where(tf.math.greater(mask_4d, 0), inf_tensor, input_tensor)
return input_tensor
def _sliding_chunks_matmul_attn_probs_value(self, attn_probs, value, window_overlap):
"""
Same as _sliding_chunks_query_key_matmul but for attn_probs and value tensors. Returned tensor will be of the
same shape as `attn_probs`
"""
batch_size, seq_len, num_heads, head_dim = shape_list(value)
tf.debugging.assert_equal(
seq_len % (window_overlap * 2), 0, message="Seq_len has to be multiple of 2 * window_overlap"
)
tf.debugging.assert_equal(
shape_list(attn_probs)[:3],
shape_list(value)[:3],
message="value and attn_probs must have same dims (except head_dim)",
)
tf.debugging.assert_equal(
shape_list(attn_probs)[3],
2 * window_overlap + 1,
message="attn_probs last dim has to be 2 * window_overlap + 1",
)
chunks_count = seq_len // window_overlap - 1
# group batch_size and num_heads dimensions into one, then chunk seq_len into chunks of size 2 window overlap
chunked_attn_probs = tf.reshape(
tf.transpose(attn_probs, (0, 2, 1, 3)),
(
batch_size * num_heads,
seq_len // window_overlap,
window_overlap,
2 * window_overlap + 1,
),
)
# group batch_size and num_heads dimensions into one
value = tf.reshape(
tf.transpose(value, (0, 2, 1, 3)),
(batch_size * num_heads, seq_len, head_dim),
)
# pad seq_len with w at the beginning of the sequence and another window overlap at the end
paddings = tf.convert_to_tensor([[0, 0], [window_overlap, window_overlap], [0, 0]])
padded_value = tf.pad(value, paddings, constant_values=-1)
# chunk padded_value into chunks of size 3 window overlap and an overlap of size window overlap
frame_size = 3 * window_overlap * head_dim
frame_hop_size = (shape_list(padded_value)[1] * head_dim - frame_size) // chunks_count
chunked_value = tf.signal.frame(
tf.reshape(padded_value, (batch_size * num_heads, -1)),
frame_size,
frame_hop_size,
)
chunked_value = tf.reshape(
chunked_value,
(batch_size * num_heads, chunks_count + 1, 3 * window_overlap, head_dim),
)
tf.debugging.assert_equal(
shape_list(chunked_value),
[batch_size * num_heads, chunks_count + 1, 3 * window_overlap, head_dim],
message="Chunked value has the wrong shape",
)
chunked_attn_probs = self._pad_and_diagonalize(chunked_attn_probs)
context = tf.einsum("bcwd,bcdh->bcwh", chunked_attn_probs, chunked_value)
context = tf.transpose(
tf.reshape(context, (batch_size, num_heads, seq_len, head_dim)),
(0, 2, 1, 3),
)
return context
@staticmethod
def _pad_and_transpose_last_two_dims(hidden_states_padded, paddings):
"""pads rows and then flips rows and columns"""
hidden_states_padded = tf.pad(
hidden_states_padded, paddings
) # padding value is not important because it will be overwritten
batch_size, chunk_size, seq_length, hidden_dim = shape_list(hidden_states_padded)
hidden_states_padded = tf.reshape(hidden_states_padded, (batch_size, chunk_size, hidden_dim, seq_length))
return hidden_states_padded
@staticmethod
def _pad_and_diagonalize(chunked_hidden_states):
"""
shift every row 1 step right, converting columns into diagonals.
Example:
```python
chunked_hidden_states: [
0.4983,
2.6918,
-0.0071,
1.0492,
-1.8348,
0.7672,
0.2986,
0.0285,
-0.7584,
0.4206,
-0.0405,
0.1599,
2.0514,
-1.1600,
0.5372,
0.2629,
]
window_overlap = num_rows = 4
```
(pad & diagonalize) => [ 0.4983, 2.6918, -0.0071, 1.0492, 0.0000, 0.0000, 0.0000
0.0000, -1.8348, 0.7672, 0.2986, 0.0285, 0.0000, 0.0000 0.0000, 0.0000, -0.7584, 0.4206,
-0.0405, 0.1599, 0.0000 0.0000, 0.0000, 0.0000, 2.0514, -1.1600, 0.5372, 0.2629 ]
"""
total_num_heads, num_chunks, window_overlap, hidden_dim = shape_list(chunked_hidden_states)
paddings = tf.convert_to_tensor([[0, 0], [0, 0], [0, 0], [0, window_overlap + 1]])
chunked_hidden_states = tf.pad(
chunked_hidden_states, paddings
) # total_num_heads x num_chunks x window_overlap x (hidden_dim+window_overlap+1). Padding value is not important because it'll be overwritten
chunked_hidden_states = tf.reshape(
chunked_hidden_states, (total_num_heads, num_chunks, -1)
) # total_num_heads x num_chunks x window_overlapL+window_overlapwindow_overlap+window_overlap
chunked_hidden_states = chunked_hidden_states[
:, :, :-window_overlap
] # total_num_heads x num_chunks x window_overlapL+window_overlapwindow_overlap
chunked_hidden_states = tf.reshape(
chunked_hidden_states,
(total_num_heads, num_chunks, window_overlap, window_overlap + hidden_dim),
) # total_num_heads x num_chunks, window_overlap x hidden_dim+window_overlap
chunked_hidden_states = chunked_hidden_states[:, :, :, :-1]
return chunked_hidden_states
@staticmethod
def _chunk(hidden_states, window_overlap):
"""convert into overlapping chunks. Chunk size = 2w, overlap size = w"""
batch_size, seq_length, hidden_dim = shape_list(hidden_states)
num_output_chunks = 2 * (seq_length // (2 * window_overlap)) - 1
# define frame size and frame stride (similar to convolution)
frame_hop_size = window_overlap * hidden_dim
frame_size = 2 * frame_hop_size
hidden_states = tf.reshape(hidden_states, (batch_size, seq_length * hidden_dim))
# chunk with overlap
chunked_hidden_states = tf.signal.frame(hidden_states, frame_size, frame_hop_size)
tf.debugging.assert_equal(
shape_list(chunked_hidden_states),
[batch_size, num_output_chunks, frame_size],
message=(
"Make sure chunking is correctly applied. `Chunked hidden states should have output dimension"
f" {[batch_size, frame_size, num_output_chunks]}, but got {shape_list(chunked_hidden_states)}."
),
)
chunked_hidden_states = tf.reshape(
chunked_hidden_states,
(batch_size, num_output_chunks, 2 * window_overlap, hidden_dim),
)
return chunked_hidden_states
@staticmethod
def _get_global_attn_indices(is_index_global_attn):
"""compute global attn indices required throughout forward pass"""
# helper variable
num_global_attn_indices = tf.math.count_nonzero(is_index_global_attn, axis=1)
num_global_attn_indices = tf.cast(num_global_attn_indices, dtype=tf.constant(1).dtype)
# max number of global attn indices in batch
max_num_global_attn_indices = tf.reduce_max(num_global_attn_indices)
# indices of global attn
is_index_global_attn_nonzero = tf.where(is_index_global_attn)
# helper variable
is_local_index_global_attn = tf.range(max_num_global_attn_indices) < tf.expand_dims(
num_global_attn_indices, axis=-1
)
# location of the non-padding values within global attention indices
is_local_index_global_attn_nonzero = tf.where(is_local_index_global_attn)
# location of the padding values within global attention indices
is_local_index_no_global_attn_nonzero = tf.where(tf.math.logical_not(is_local_index_global_attn))
return (
max_num_global_attn_indices,
is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero,
)
def _concat_with_global_key_attn_probs(
self,
attn_scores,
key_vectors,
query_vectors,
max_num_global_attn_indices,
is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero,
):
batch_size = shape_list(key_vectors)[0]
# select global key vectors
global_key_vectors = tf.gather_nd(key_vectors, is_index_global_attn_nonzero)
# create only global key vectors
key_vectors_only_global = tf.scatter_nd(
is_local_index_global_attn_nonzero,
global_key_vectors,
shape=(
batch_size,
max_num_global_attn_indices,
self.num_heads,
self.head_dim,
),
)
# (batch_size, seq_len, num_heads, max_num_global_attn_indices)
attn_probs_from_global_key = tf.einsum("blhd,bshd->blhs", query_vectors, key_vectors_only_global)
# (batch_size, max_num_global_attn_indices, seq_len, num_heads)
attn_probs_from_global_key_trans = tf.transpose(attn_probs_from_global_key, (0, 3, 1, 2))
mask_shape = (shape_list(is_local_index_no_global_attn_nonzero)[0],) + tuple(
shape_list(attn_probs_from_global_key_trans)[-2:]
)
mask = tf.ones(mask_shape) * -10000.0
mask = tf.cast(mask, dtype=attn_probs_from_global_key_trans.dtype)
# scatter mask
attn_probs_from_global_key_trans = tf.tensor_scatter_nd_update(
attn_probs_from_global_key_trans,
is_local_index_no_global_attn_nonzero,
mask,
)
# (batch_size, seq_len, num_heads, max_num_global_attn_indices)
attn_probs_from_global_key = tf.transpose(attn_probs_from_global_key_trans, (0, 2, 3, 1))
# concat to attn_probs
# (batch_size, seq_len, num_heads, extra attention count + 2*window+1)
attn_scores = tf.concat((attn_probs_from_global_key, attn_scores), axis=-1)
return attn_scores
def _compute_attn_output_with_global_indices(
self,
value_vectors,
attn_probs,
max_num_global_attn_indices,
is_index_global_attn_nonzero,
is_local_index_global_attn_nonzero,
):
batch_size = shape_list(attn_probs)[0]
# cut local attn probs to global only
attn_probs_only_global = attn_probs[:, :, :, :max_num_global_attn_indices]
# select global value vectors
global_value_vectors = tf.gather_nd(value_vectors, is_index_global_attn_nonzero)
# create only global value vectors
value_vectors_only_global = tf.scatter_nd(
is_local_index_global_attn_nonzero,
global_value_vectors,
shape=(
batch_size,
max_num_global_attn_indices,
self.num_heads,
self.head_dim,
),
)
# compute attn output only global
attn_output_only_global = tf.einsum("blhs,bshd->blhd", attn_probs_only_global, value_vectors_only_global)
# reshape attn probs
attn_probs_without_global = attn_probs[:, :, :, max_num_global_attn_indices:]
# compute attn output with global
attn_output_without_global = self._sliding_chunks_matmul_attn_probs_value(
attn_probs_without_global, value_vectors, self.one_sided_attn_window_size
)
return attn_output_only_global + attn_output_without_global
def _compute_global_attn_output_from_hidden(
self,
attn_output,
hidden_states,
max_num_global_attn_indices,
layer_head_mask,
is_local_index_global_attn_nonzero,
is_index_global_attn_nonzero,
is_local_index_no_global_attn_nonzero,
is_index_masked,
training,
):
batch_size, seq_len = shape_list(hidden_states)[:2]
# prepare global hidden states
global_attn_hidden_states = tf.gather_nd(hidden_states, is_index_global_attn_nonzero)
global_attn_hidden_states = tf.scatter_nd(
is_local_index_global_attn_nonzero,
global_attn_hidden_states,
shape=(batch_size, max_num_global_attn_indices, self.embed_dim),
)
# global key, query, value
global_query_vectors_only_global = self.query_global(global_attn_hidden_states)
global_key_vectors = self.key_global(hidden_states)
global_value_vectors = self.value_global(hidden_states)
# normalize
global_query_vectors_only_global /= tf.math.sqrt(
tf.cast(self.head_dim, dtype=global_query_vectors_only_global.dtype)
)
global_query_vectors_only_global = self.reshape_and_transpose(global_query_vectors_only_global, batch_size)
global_key_vectors = self.reshape_and_transpose(global_key_vectors, batch_size)
global_value_vectors = self.reshape_and_transpose(global_value_vectors, batch_size)
# compute attn scores
global_attn_scores = tf.matmul(global_query_vectors_only_global, global_key_vectors, transpose_b=True)
tf.debugging.assert_equal(
shape_list(global_attn_scores),
[batch_size * self.num_heads, max_num_global_attn_indices, seq_len],
message=(
"global_attn_scores have the wrong size. Size should be"
f" {(batch_size * self.num_heads, max_num_global_attn_indices, seq_len)}, but is"
f" {shape_list(global_attn_scores)}."
),
)
global_attn_scores = tf.reshape(
global_attn_scores,
(batch_size, self.num_heads, max_num_global_attn_indices, seq_len),
)
global_attn_scores_trans = tf.transpose(global_attn_scores, (0, 2, 1, 3))
mask_shape = (shape_list(is_local_index_no_global_attn_nonzero)[0],) + tuple(
shape_list(global_attn_scores_trans)[-2:]
)
global_attn_mask = tf.ones(mask_shape) * -10000.0
global_attn_mask = tf.cast(global_attn_mask, dtype=global_attn_scores_trans.dtype)
# scatter mask
global_attn_scores_trans = tf.tensor_scatter_nd_update(
global_attn_scores_trans,
is_local_index_no_global_attn_nonzero,
global_attn_mask,
)
global_attn_scores = tf.transpose(global_attn_scores_trans, (0, 2, 1, 3))
# mask global attn scores
attn_mask = tf.tile(is_index_masked[:, None, None, :], (1, shape_list(global_attn_scores)[1], 1, 1))
global_attn_scores = tf.where(attn_mask, -10000.0, global_attn_scores)
global_attn_scores = tf.reshape(
global_attn_scores,
(batch_size * self.num_heads, max_num_global_attn_indices, seq_len),
)
# compute global attn probs
global_attn_probs_float = stable_softmax(global_attn_scores, axis=-1)
# apply layer head masking
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
global_attn_probs_float = tf.reshape(layer_head_mask, (1, -1, 1, 1)) * tf.reshape(
global_attn_probs_float, (batch_size, self.num_heads, max_num_global_attn_indices, seq_len)
)
global_attn_probs_float = tf.reshape(
global_attn_probs_float, (batch_size * self.num_heads, max_num_global_attn_indices, seq_len)
)
# dropout
global_attn_probs = self.global_dropout(global_attn_probs_float, training=training)
# global attn output
global_attn_output = tf.matmul(global_attn_probs, global_value_vectors)
tf.debugging.assert_equal(
shape_list(global_attn_output),
[batch_size * self.num_heads, max_num_global_attn_indices, self.head_dim],
message=(
"global_attn_output tensor has the wrong size. Size should be"
f" {(batch_size * self.num_heads, max_num_global_attn_indices, self.head_dim)}, but is"
f" {shape_list(global_attn_output)}."
),
)
global_attn_output = tf.reshape(
global_attn_output,
(batch_size, self.num_heads, max_num_global_attn_indices, self.head_dim),
)
# get only non zero global attn output
nonzero_global_attn_output = tf.gather_nd(
tf.transpose(global_attn_output, (0, 2, 1, 3)),
is_local_index_global_attn_nonzero,
)
nonzero_global_attn_output = tf.reshape(
nonzero_global_attn_output,
(shape_list(is_local_index_global_attn_nonzero)[0], -1),
)
# overwrite values with global attention
attn_output = tf.tensor_scatter_nd_update(
attn_output, is_index_global_attn_nonzero, nonzero_global_attn_output
)
global_attn_probs = tf.reshape(
global_attn_probs, (batch_size, self.num_heads, max_num_global_attn_indices, seq_len)
)
return attn_output, global_attn_probs
def reshape_and_transpose(self, vector, batch_size):
return tf.reshape(
tf.transpose(
tf.reshape(vector, (batch_size, -1, self.num_heads, self.head_dim)),
(0, 2, 1, 3),
),
(batch_size * self.num_heads, -1, self.head_dim),
) | class_definition | 4,815 | 41,333 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,288 |
class TFLEDEncoderAttention(keras.layers.Layer):
def __init__(self, config, layer_id, **kwargs):
super().__init__(**kwargs)
self.longformer_self_attn = TFLEDEncoderSelfAttention(config, layer_id=layer_id, name="longformer_self_attn")
self.output_dense = keras.layers.Dense(config.d_model, use_bias=True, name="output")
self.config = config
def call(self, inputs, training=False):
(
hidden_states,
attention_mask,
layer_head_mask,
is_index_masked,
is_index_global_attn,
is_global_attn,
) = inputs
self_outputs = self.longformer_self_attn(
[hidden_states, attention_mask, layer_head_mask, is_index_masked, is_index_global_attn, is_global_attn],
training=training,
)
attention_output = self.output_dense(self_outputs[0], training=training)
outputs = (attention_output,) + self_outputs[1:]
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "longformer_self_attn", None) is not None:
with tf.name_scope(self.longformer_self_attn.name):
self.longformer_self_attn.build(None)
if getattr(self, "output_dense", None) is not None:
with tf.name_scope(self.output_dense.name):
self.output_dense.build([None, None, self.config.d_model]) | class_definition | 41,336 | 42,817 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,289 |
class TFLEDDecoderAttention(keras.layers.Layer):
"""Multi-headed attention from "Attention Is All You Need"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
**kwargs,
):
super().__init__(**kwargs)
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = keras.layers.Dropout(dropout)
self.head_dim = embed_dim // num_heads
assert self.head_dim * num_heads == self.embed_dim, "embed_dim must be divisible by num_heads"
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = keras.layers.Dense(embed_dim, use_bias=bias, name="k_proj")
self.q_proj = keras.layers.Dense(embed_dim, use_bias=bias, name="q_proj")
self.v_proj = keras.layers.Dense(embed_dim, use_bias=bias, name="v_proj")
self.out_proj = keras.layers.Dense(embed_dim, use_bias=bias, name="out_proj")
def _shape(self, tensor: tf.Tensor, seq_len: int, bsz: int):
return tf.transpose(tf.reshape(tensor, (bsz, seq_len, self.num_heads, self.head_dim)), (0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
key_value_states: tf.Tensor | None = None,
past_key_value: Tuple[Tuple[tf.Tensor]] | None = None,
attention_mask: tf.Tensor | None = None,
layer_head_mask: tf.Tensor | None = None,
training=False,
) -> Tuple[tf.Tensor, tf.Tensor | None]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, embed_dim = shape_list(hidden_states)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = tf.concat([past_key_value[0], key_states], axis=2)
value_states = tf.concat([past_key_value[1], value_states], axis=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = tf.reshape(self._shape(query_states, tgt_len, bsz), proj_shape)
key_states = tf.reshape(key_states, proj_shape)
value_states = tf.reshape(value_states, proj_shape)
src_len = shape_list(key_states)[1]
attn_weights = tf.matmul(query_states, key_states, transpose_b=True)
tf.debugging.assert_equal(
shape_list(attn_weights),
[bsz * self.num_heads, tgt_len, src_len],
message=(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {shape_list(attn_weights)}"
),
)
if attention_mask is not None:
tf.debugging.assert_equal(
shape_list(attention_mask),
[bsz, 1, tgt_len, src_len],
message=(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {shape_list(attention_mask)}"
),
)
attn_weights = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len)) + tf.cast(
attention_mask, dtype=attn_weights.dtype
)
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_weights = stable_softmax(attn_weights, axis=-1)
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
attn_weights = tf.reshape(layer_head_mask, (1, -1, 1, 1)) * tf.reshape(
attn_weights, (bsz, self.num_heads, tgt_len, src_len)
)
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_probs = self.dropout(attn_weights, training=training)
attn_output = tf.matmul(attn_probs, value_states)
tf.debugging.assert_equal(
shape_list(attn_output),
[bsz * self.num_heads, tgt_len, self.head_dim],
message=(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {shape_list(attn_output)}"
),
)
attn_output = tf.transpose(
tf.reshape(attn_output, (bsz, self.num_heads, tgt_len, self.head_dim)), (0, 2, 1, 3)
)
attn_output = tf.reshape(attn_output, (bsz, tgt_len, embed_dim))
attn_output = self.out_proj(attn_output)
attn_weights: tf.Tensor = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len))
return attn_output, attn_weights, past_key_value
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "k_proj", None) is not None:
with tf.name_scope(self.k_proj.name):
self.k_proj.build([None, None, self.embed_dim])
if getattr(self, "q_proj", None) is not None:
with tf.name_scope(self.q_proj.name):
self.q_proj.build([None, None, self.embed_dim])
if getattr(self, "v_proj", None) is not None:
with tf.name_scope(self.v_proj.name):
self.v_proj.build([None, None, self.embed_dim])
if getattr(self, "out_proj", None) is not None:
with tf.name_scope(self.out_proj.name):
self.out_proj.build([None, None, self.embed_dim]) | class_definition | 42,820 | 50,224 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,290 |
class TFLEDEncoderLayer(keras.layers.Layer):
def __init__(self, config: LEDConfig, layer_id: int, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.d_model
self.self_attn = TFLEDEncoderAttention(config, layer_id, name="self_attn")
self.self_attn_layer_norm = keras.layers.LayerNormalization(epsilon=1e-5, name="self_attn_layer_norm")
self.dropout = keras.layers.Dropout(config.dropout)
self.activation_fn = get_tf_activation(config.activation_function)
self.activation_dropout = keras.layers.Dropout(config.activation_dropout)
self.fc1 = keras.layers.Dense(config.encoder_ffn_dim, name="fc1")
self.fc2 = keras.layers.Dense(self.embed_dim, name="fc2")
self.final_layer_norm = keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
self.config = config
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
layer_head_mask: tf.Tensor,
is_index_masked: tf.Tensor,
is_index_global_attn: tf.Tensor,
is_global_attn: bool,
training=False,
):
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape *(batch, seq_len, embed_dim)*
attention_mask (`tf.Tensor`): attention mask of size
*(batch, 1, tgt_len, src_len)* where padding elements are indicated by very large negative values.
layer_head_mask (`tf.Tensor`): mask for attention heads in a given layer of size
*(config.encoder_attention_heads,)*.
"""
residual = hidden_states
layer_outputs = self.self_attn(
[hidden_states, attention_mask, layer_head_mask, is_index_masked, is_index_global_attn, is_global_attn],
training=training,
)
hidden_states = layer_outputs[0]
tf.debugging.assert_equal(
shape_list(hidden_states),
shape_list(residual),
message=f"Self attn modified the shape of query {shape_list(residual)} to {shape_list(hidden_states)}",
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout(hidden_states, training=training)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
return (hidden_states,) + layer_outputs[1:]
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "self_attn", None) is not None:
with tf.name_scope(self.self_attn.name):
self.self_attn.build(None)
if getattr(self, "self_attn_layer_norm", None) is not None:
with tf.name_scope(self.self_attn_layer_norm.name):
self.self_attn_layer_norm.build([None, None, self.embed_dim])
if getattr(self, "fc1", None) is not None:
with tf.name_scope(self.fc1.name):
self.fc1.build([None, None, self.embed_dim])
if getattr(self, "fc2", None) is not None:
with tf.name_scope(self.fc2.name):
self.fc2.build([None, None, self.config.encoder_ffn_dim])
if getattr(self, "final_layer_norm", None) is not None:
with tf.name_scope(self.final_layer_norm.name):
self.final_layer_norm.build([None, None, self.embed_dim]) | class_definition | 50,227 | 53,991 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,291 |
class TFLEDDecoderLayer(keras.layers.Layer):
def __init__(self, config: LEDConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.d_model
self.self_attn = TFLEDDecoderAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
name="self_attn",
is_decoder=True,
)
self.dropout = keras.layers.Dropout(config.dropout)
self.activation_fn = get_tf_activation(config.activation_function)
self.activation_dropout = keras.layers.Dropout(config.activation_dropout)
self.self_attn_layer_norm = keras.layers.LayerNormalization(epsilon=1e-5, name="self_attn_layer_norm")
self.encoder_attn = TFLEDDecoderAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
name="encoder_attn",
is_decoder=True,
)
self.encoder_attn_layer_norm = keras.layers.LayerNormalization(epsilon=1e-5, name="encoder_attn_layer_norm")
self.fc1 = keras.layers.Dense(config.decoder_ffn_dim, name="fc1")
self.fc2 = keras.layers.Dense(self.embed_dim, name="fc2")
self.final_layer_norm = keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
self.config = config
def call(
self,
hidden_states,
attention_mask: tf.Tensor | None = None,
encoder_hidden_states: tf.Tensor | None = None,
encoder_attention_mask: tf.Tensor | None = None,
layer_head_mask: tf.Tensor | None = None,
encoder_layer_head_mask: tf.Tensor | None = None,
past_key_value: Tuple[tf.Tensor] | None = None,
training=False,
) -> Tuple[tf.Tensor, tf.Tensor, tf.Tensor, Tuple[Tuple[tf.Tensor]]]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape *(batch, seq_len, embed_dim)*
attention_mask (`tf.Tensor`): attention mask of size
*(batch, 1, tgt_len, src_len)* where padding elements are indicated by very large negative values.
encoder_hidden_states (`tf.Tensor`):
cross attention input to the layer of shape *(batch, seq_len, embed_dim)*
encoder_attention_mask (`tf.Tensor`): encoder attention mask of size
*(batch, 1, tgt_len, src_len)* where padding elements are indicated by very large negative values.
layer_head_mask (`tf.Tensor`): mask for attention heads in a given layer of size
*(config.encoder_attention_heads,)*.
encoder_layer_head_mask (`tf.Tensor`): mask for encoder attention heads in a given layer of
size *(config.encoder_attention_heads,)*.
past_key_value (`Tuple(tf.Tensor)`): cached past key and value projection states
"""
residual = hidden_states
# Self-Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=encoder_layer_head_mask,
past_key_value=cross_attn_past_key_value,
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout(hidden_states, training=training)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
return (
hidden_states,
self_attn_weights,
cross_attn_weights,
present_key_value,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "self_attn", None) is not None:
with tf.name_scope(self.self_attn.name):
self.self_attn.build(None)
if getattr(self, "self_attn_layer_norm", None) is not None:
with tf.name_scope(self.self_attn_layer_norm.name):
self.self_attn_layer_norm.build([None, None, self.embed_dim])
if getattr(self, "encoder_attn", None) is not None:
with tf.name_scope(self.encoder_attn.name):
self.encoder_attn.build(None)
if getattr(self, "encoder_attn_layer_norm", None) is not None:
with tf.name_scope(self.encoder_attn_layer_norm.name):
self.encoder_attn_layer_norm.build([None, None, self.embed_dim])
if getattr(self, "fc1", None) is not None:
with tf.name_scope(self.fc1.name):
self.fc1.build([None, None, self.embed_dim])
if getattr(self, "fc2", None) is not None:
with tf.name_scope(self.fc2.name):
self.fc2.build([None, None, self.config.decoder_ffn_dim])
if getattr(self, "final_layer_norm", None) is not None:
with tf.name_scope(self.final_layer_norm.name):
self.final_layer_norm.build([None, None, self.embed_dim]) | class_definition | 53,994 | 60,789 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,292 |
class TFLEDPreTrainedModel(TFPreTrainedModel):
config_class = LEDConfig
base_model_prefix = "led"
@property
def input_signature(self):
sig = super().input_signature
sig["global_attention_mask"] = tf.TensorSpec((None, None), tf.int32, name="global_attention_mask")
return sig | class_definition | 60,792 | 61,107 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,293 |
class TFLEDEncoderBaseModelOutput(ModelOutput):
"""
Base class for Longformer's outputs, with potential hidden states, local and global attentions.
Args:
last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length, x +
attention_window + 1)`, where `x` is the number of tokens with global attention mask.
Local attentions weights after the attention softmax, used to compute the weighted average in the
self-attention heads. Those are the attention weights from every token in the sequence to every token with
global attention (first `x` values) and to every token in the attention window (remaining `attention_window
+ 1` values). Note that the first `x` values refer to tokens with fixed positions in the text, but the
remaining `attention_window + 1` values refer to tokens with relative positions: the attention weight of a
token to itself is located at index `x + attention_window / 2` and the `attention_window / 2` preceding
(succeeding) values are the attention weights to the `attention_window / 2` preceding (succeeding) tokens.
If the attention window contains a token with global attention, the attention weight at the corresponding
index is set to 0; the value should be accessed from the first `x` attention weights. If a token has global
attention, the attention weights to all other tokens in `attentions` is set to 0, the values should be
accessed from `global_attentions`.
global_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length, x)`, where `x`
is the number of tokens with global attention mask.
Global attentions weights after the attention softmax, used to compute the weighted average in the
self-attention heads. Those are the attention weights from every token with global attention to every token
in the sequence.
"""
last_hidden_state: tf.Tensor = None
hidden_states: Tuple[tf.Tensor, ...] | None = None
attentions: Tuple[tf.Tensor, ...] | None = None
global_attentions: Tuple[tf.Tensor, ...] | None = None | class_definition | 61,249 | 64,403 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,294 |
class TFLEDSeq2SeqModelOutput(ModelOutput):
"""
Base class for model encoder's outputs that also contains : pre-computed hidden states that can speed up sequential
decoding.
Args:
last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`List[tf.Tensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `tf.Tensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size, num_heads,
sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
encoder_global_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length, x)`, where `x`
is the number of tokens with global attention mask.
Global attentions weights after the attention softmax, used to compute the weighted average in the
self-attention heads. Those are the attention weights from every token with global attention to every token
in the sequence.
"""
last_hidden_state: tf.Tensor = None
past_key_values: List[tf.Tensor] | None = None
decoder_hidden_states: Tuple[tf.Tensor, ...] | None = None
decoder_attentions: Tuple[tf.Tensor, ...] | None = None
cross_attentions: Tuple[tf.Tensor, ...] | None = None
encoder_last_hidden_state: tf.Tensor | None = None
encoder_hidden_states: Tuple[tf.Tensor, ...] | None = None
encoder_attentions: Tuple[tf.Tensor, ...] | None = None
encoder_global_attentions: Tuple[tf.Tensor, ...] | None = None | class_definition | 64,417 | 69,024 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,295 |
class TFLEDSeq2SeqLMOutput(ModelOutput):
"""
Base class for sequence-to-sequence language models outputs.
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`tf.Tensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
past_key_values (`List[tf.Tensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `tf.Tensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size, num_heads,
sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
encoder_global_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length, x)`, where `x`
is the number of tokens with global attention mask.
Global attentions weights after the attention softmax, used to compute the weighted average in the
self-attention heads. Those are the attention weights from every token with global attention to every token
in the sequence.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
past_key_values: List[tf.Tensor] | None = None
decoder_hidden_states: Tuple[tf.Tensor, ...] | None = None
decoder_attentions: Tuple[tf.Tensor, ...] | None = None
cross_attentions: Tuple[tf.Tensor, ...] | None = None
encoder_last_hidden_state: tf.Tensor | None = None
encoder_hidden_states: Tuple[tf.Tensor, ...] | None = None
encoder_attentions: Tuple[tf.Tensor, ...] | None = None
encoder_global_attentions: Tuple[tf.Tensor, ...] | None = None | class_definition | 69,038 | 73,582 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,296 |
class TFLEDEncoder(keras.layers.Layer):
config_class = LEDConfig
"""
Transformer encoder consisting of *config.encoder_layers* self-attention layers. Each layer is a
[`TFLEDEncoderLayer`].
Args:
config: LEDConfig
"""
def __init__(self, config: LEDConfig, embed_tokens: Optional[keras.layers.Embedding] = None, **kwargs):
super().__init__(**kwargs)
self.config = config
self.dropout = keras.layers.Dropout(config.dropout)
if config.encoder_layerdrop > 0:
logger.warning("Layerdrop is currently disabled in TFLED models.")
self.layerdrop = 0.0
self.padding_idx = config.pad_token_id
if isinstance(config.attention_window, int):
assert config.attention_window % 2 == 0, "`config.attention_window` has to be an even value"
assert config.attention_window > 0, "`config.attention_window` has to be positive"
config.attention_window = [config.attention_window] * config.num_hidden_layers # one value per layer
else:
assert len(config.attention_window) == config.num_hidden_layers, (
"`len(config.attention_window)` should equal `config.num_hidden_layers`. "
f"Expected {config.num_hidden_layers}, given {len(config.attention_window)}"
)
self.attention_window = config.attention_window
self.embed_tokens = embed_tokens
self.embed_positions = TFLEDLearnedPositionalEmbedding(
config.max_encoder_position_embeddings,
config.d_model,
name="embed_positions",
)
self.layers = [TFLEDEncoderLayer(config, i, name=f"layers.{i}") for i in range(config.encoder_layers)]
self.layernorm_embedding = keras.layers.LayerNormalization(epsilon=1e-5, name="layernorm_embedding")
self.embed_dim = config.d_model
def get_embed_tokens(self):
return self.embed_tokens
def set_embed_tokens(self, embed_tokens):
self.embed_tokens = embed_tokens
@unpack_inputs
def call(
self,
input_ids=None,
inputs_embeds=None,
attention_mask=None,
global_attention_mask=None,
head_mask=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
"""
Args:
input_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
check_embeddings_within_bounds(input_ids, self.embed_tokens.input_dim)
inputs_embeds = self.embed_tokens(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(input_shape, 1)
# merge `global_attention_mask` and `attention_mask`
if global_attention_mask is not None:
attention_mask = attention_mask * tf.cast((global_attention_mask + 1), dtype=attention_mask.dtype)
padding_len, input_ids, attention_mask, inputs_embeds = self._pad_to_window_size(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
pad_token_id=self.padding_idx,
)
input_shape = shape_list(attention_mask)
# is index masked or global attention
is_index_masked = tf.math.less(tf.cast(attention_mask, tf.int8), 1)
is_index_global_attn = tf.math.greater(tf.cast(attention_mask, tf.int8), 1)
is_global_attn = tf.math.reduce_any(is_index_global_attn)
embed_pos = self.embed_positions(input_shape)
hidden_states = inputs_embeds + embed_pos
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
# check attention mask and invert
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask)[:, 0, 0, :]
attention_mask = attention_mask[:, :, None, None]
encoder_states = () if output_hidden_states else None
all_attentions = all_global_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
tf.debugging.assert_equal(
shape_list(head_mask)[0],
len(self.layers),
message=(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {shape_list(head_mask)[0]}."
),
)
# encoder layers
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
hidden_states_to_add = self.compute_hidden_states(hidden_states, padding_len)
encoder_states = encoder_states + (hidden_states_to_add,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = random.uniform(0, 1)
if training and (dropout_probability < self.layerdrop): # skip the layer
continue
layer_outputs = encoder_layer(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=head_mask[idx] if head_mask is not None else None,
is_index_masked=is_index_masked,
is_index_global_attn=is_index_global_attn,
is_global_attn=is_global_attn,
)
hidden_states = layer_outputs[0]
if output_attentions:
# bzs x seq_len x num_attn_heads x (num_global_attn + attention_window_len + 1) => bzs x num_attn_heads x seq_len x (num_global_attn + attention_window_len + 1)
all_attentions = all_attentions + (tf.transpose(layer_outputs[1], (0, 2, 1, 3)),)
# bzs x num_attn_heads x num_global_attn x seq_len => bzs x num_attn_heads x seq_len x num_global_attn
all_global_attentions = all_global_attentions + (tf.transpose(layer_outputs[2], (0, 1, 3, 2)),)
# undo padding
# unpad `hidden_states` because the calling function is expecting a length == input_ids.size(1)
hidden_states = self.compute_hidden_states(hidden_states, padding_len)
# undo padding
if output_attentions:
all_attentions = (
tuple([state[:, :, :-padding_len, :] for state in all_attentions])
if padding_len > 0
else all_attentions
)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return TFLEDEncoderBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=encoder_states,
attentions=all_attentions,
global_attentions=all_global_attentions,
)
@tf.function
def compute_hidden_states(self, hidden_states, padding_len):
return hidden_states[:, :-padding_len] if padding_len > 0 else hidden_states
def _pad_to_window_size(
self,
input_ids,
attention_mask,
inputs_embeds,
pad_token_id,
):
"""A helper function to pad tokens and mask to work with implementation of Longformer selfattention."""
# padding
attention_window = (
self.attention_window if isinstance(self.attention_window, int) else max(self.attention_window)
)
assert attention_window % 2 == 0, f"`attention_window` should be an even value. Given {attention_window}"
input_shape = shape_list(input_ids) if input_ids is not None else shape_list(inputs_embeds)
batch_size, seq_len = input_shape[:2]
padding_len = (attention_window - seq_len % attention_window) % attention_window
if padding_len > 0:
logger.warning_once(
f"Input ids are automatically padded from {seq_len} to {seq_len + padding_len} to be a multiple of "
f"`config.attention_window`: {attention_window}"
)
paddings = tf.convert_to_tensor([[0, 0], [0, padding_len]])
if input_ids is not None:
input_ids = tf.pad(input_ids, paddings, constant_values=pad_token_id)
if inputs_embeds is not None:
if padding_len > 0:
input_ids_padding = tf.fill((batch_size, padding_len), pad_token_id)
inputs_embeds_padding = self.embed_tokens(input_ids_padding)
inputs_embeds = tf.concat([inputs_embeds, inputs_embeds_padding], axis=-2)
attention_mask = tf.pad(attention_mask, paddings, constant_values=False) # no attention on the padding tokens
return (
padding_len,
input_ids,
attention_mask,
inputs_embeds,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "embed_positions", None) is not None:
with tf.name_scope(self.embed_positions.name):
self.embed_positions.build(None)
if getattr(self, "layernorm_embedding", None) is not None:
with tf.name_scope(self.layernorm_embedding.name):
self.layernorm_embedding.build([None, None, self.embed_dim])
if getattr(self, "layers", None) is not None:
for layer in self.layers:
with tf.name_scope(layer.name):
layer.build(None) | class_definition | 80,384 | 92,528 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,297 |
class TFLEDDecoder(keras.layers.Layer):
config_class = LEDConfig
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`TFLEDDecoderLayer`]
Args:
config: LEDConfig
embed_tokens: output embedding
"""
def __init__(self, config: LEDConfig, embed_tokens: Optional[keras.layers.Embedding] = None, **kwargs):
super().__init__(**kwargs)
self.config = config
self.padding_idx = config.pad_token_id
self.embed_tokens = embed_tokens
if config.decoder_layerdrop > 0:
logger.warning("Layerdrop is currently disabled in TFLED models.")
self.layerdrop = 0.0
self.embed_positions = TFLEDLearnedPositionalEmbedding(
config.max_decoder_position_embeddings,
config.d_model,
name="embed_positions",
)
self.layers = [TFLEDDecoderLayer(config, name=f"layers.{i}") for i in range(config.decoder_layers)]
self.layernorm_embedding = keras.layers.LayerNormalization(epsilon=1e-5, name="layernorm_embedding")
self.dropout = keras.layers.Dropout(config.dropout)
def set_embed_tokens(self, embed_tokens):
self.embed_tokens = embed_tokens
@unpack_inputs
def call(
self,
input_ids=None,
inputs_embeds=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
head_mask=None,
encoder_head_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
r"""
Args:
input_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it. Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details. [What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`tf.Tensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`tf.Tensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_head_mask (`tf.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in encoder to avoid performing cross-attention
on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers` with each tuple having 2 tuples each of which has 2 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up
decoding. If `past_key_values` are used, the user can optionally input only the last
`decoder_input_ids` (those that don't have their past key value states given to this model) of shape
`(batch_size, 1)` instead of all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
past_key_values_length = shape_list(past_key_values[0][0])[2] if past_key_values is not None else 0
# embed positions
positions = self.embed_positions(input_shape, past_key_values_length)
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.embed_tokens.input_dim)
inputs_embeds = self.embed_tokens(input_ids)
hidden_states = inputs_embeds
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(input_shape, past_key_values_length=past_key_values_length)
else:
combined_attention_mask = _expand_mask(
tf.ones((input_shape[0], input_shape[1] + past_key_values_length)), tgt_len=input_shape[-1]
)
if attention_mask is not None and input_shape[-1] > 1:
combined_attention_mask = combined_attention_mask + _expand_mask(attention_mask, tgt_len=input_shape[-1])
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, tgt_len=input_shape[-1])
hidden_states = self.layernorm_embedding(hidden_states + positions)
hidden_states = self.dropout(hidden_states, training=training)
# decoder layers
all_hidden_states = ()
all_self_attns = ()
all_cross_attentions = ()
present_key_values = ()
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
tf.debugging.assert_equal(
shape_list(head_mask)[0],
len(self.layers),
message=(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {shape_list(head_mask)[0]}."
),
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
dropout_probability = random.uniform(0, 1)
if training and (dropout_probability < self.layerdrop):
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
hidden_states, layer_self_attn, layer_cross_attn, present_key_value = decoder_layer(
hidden_states,
attention_mask=combined_attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=head_mask[idx] if head_mask is not None else None,
encoder_layer_head_mask=encoder_head_mask[idx] if encoder_head_mask is not None else None,
past_key_value=past_key_value,
)
if use_cache:
present_key_values += (present_key_value,)
if output_attentions:
all_self_attns += (layer_self_attn,)
all_cross_attentions += (layer_cross_attn,)
if output_hidden_states:
all_hidden_states += (hidden_states,)
else:
all_hidden_states = None
all_self_attns = all_self_attns if output_attentions else None
all_cross_attentions = all_cross_attentions if output_attentions else None
present_key_values = present_key_values if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, present_key_values, all_hidden_states, all_self_attns, all_cross_attentions]
if v is not None
)
else:
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=present_key_values,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "embed_positions", None) is not None:
with tf.name_scope(self.embed_positions.name):
self.embed_positions.build(None)
if getattr(self, "layernorm_embedding", None) is not None:
with tf.name_scope(self.layernorm_embedding.name):
self.layernorm_embedding.build([None, None, self.config.d_model])
if getattr(self, "layers", None) is not None:
for layer in self.layers:
with tf.name_scope(layer.name):
layer.build(None) | class_definition | 92,551 | 103,515 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,298 |
class TFLEDMainLayer(keras.layers.Layer):
config_class = LEDConfig
def __init__(self, config: LEDConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.shared = keras.layers.Embedding(
input_dim=config.vocab_size,
output_dim=config.d_model,
embeddings_initializer=keras.initializers.TruncatedNormal(stddev=self.config.init_std),
name="led.shared",
)
# Additional attribute to specify the expected name scope of the layer (for loading/storing weights)
self.shared.load_weight_prefix = "led.shared"
self.encoder = TFLEDEncoder(config, self.shared, name="encoder")
self.decoder = TFLEDDecoder(config, self.shared, name="decoder")
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.embed_tokens = self.shared
self.decoder.embed_tokens = self.shared
@unpack_inputs
def call(
self,
input_ids=None,
attention_mask=None,
decoder_input_ids=None,
decoder_attention_mask=None,
head_mask=None,
decoder_head_mask=None,
encoder_outputs: Optional[Union[Tuple, TFLEDEncoderBaseModelOutput]] = None,
global_attention_mask=None,
past_key_values=None,
inputs_embeds=None,
decoder_inputs_embeds=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
**kwargs,
):
if decoder_input_ids is None and decoder_inputs_embeds is None:
use_cache = False
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
global_attention_mask=global_attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a TFLEDEncoderBaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, TFLEDEncoderBaseModelOutput):
encoder_outputs = TFLEDEncoderBaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# If the user passed a TFLEDEncoderBaseModelOutput for encoder_outputs, we wrap it in a tuple when return_dict=False
elif not return_dict and not isinstance(encoder_outputs, tuple):
encoder_outputs = encoder_outputs.to_tuple()
decoder_outputs = self.decoder(
decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
encoder_head_mask=head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return TFLEDSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
encoder_global_attentions=encoder_outputs.global_attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
# The shared/tied weights expect to be in the model base namespace
# Adding "/" to the end (not the start!) of a tf.name_scope puts it in the root namespace rather than
# the current one.
with tf.name_scope(self.shared.load_weight_prefix + "/" + self.shared.name + "/"):
self.shared.build(None)
if getattr(self, "encoder", None) is not None:
with tf.name_scope(self.encoder.name):
self.encoder.build(None)
if getattr(self, "decoder", None) is not None:
with tf.name_scope(self.decoder.name):
self.decoder.build(None) | class_definition | 103,538 | 108,618 | 0 | /Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/led/modeling_tf_led.py | null | 4,299 |
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