label int64 0 1 | func1 stringlengths 173 53.1k | func2 stringlengths 173 53.1k | id int64 0 901k |
|---|---|---|---|
1 | private void copyFileToPhotoFolder(File photo, String personId) { try { FileChannel in = new FileInputStream(photo).getChannel(); File dirServer = new File(Constants.PHOTO_DIR); if (!dirServer.exists()) { dirServer.mkdirs(); } File fileServer = new File(Constants.PHOTO_DIR + personId + ".jpg"); if (!fileServer.exists()) { fileServer.createNewFile(); } in.transferTo(0, in.size(), new FileOutputStream(fileServer).getChannel()); in.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } | public static void unzip2(String strZipFile, String folder) throws IOException, ArchiveException { FileUtil.fileExists(strZipFile, true); final InputStream is = new FileInputStream(strZipFile); ArchiveInputStream in = new ArchiveStreamFactory().createArchiveInputStream("zip", is); ZipArchiveEntry entry = null; OutputStream out = null; while ((entry = (ZipArchiveEntry) in.getNextEntry()) != null) { File zipPath = new File(folder); File destinationFilePath = new File(zipPath, entry.getName()); destinationFilePath.getParentFile().mkdirs(); if (entry.isDirectory()) { continue; } else { out = new FileOutputStream(new File(folder, entry.getName())); IOUtils.copy(in, out); out.close(); } } in.close(); } | 15,700 |
1 | static void linkBlocks(File from, File to, int oldLV) throws IOException { if (!from.isDirectory()) { if (from.getName().startsWith(COPY_FILE_PREFIX)) { IOUtils.copyBytes(new FileInputStream(from), new FileOutputStream(to), 16 * 1024, true); } else { if (oldLV >= PRE_GENERATIONSTAMP_LAYOUT_VERSION) { to = new File(convertMetatadataFileName(to.getAbsolutePath())); } HardLink.createHardLink(from, to); } return; } if (!to.mkdir()) throw new IOException("Cannot create directory " + to); String[] blockNames = from.list(new java.io.FilenameFilter() { public boolean accept(File dir, String name) { return name.startsWith(BLOCK_SUBDIR_PREFIX) || name.startsWith(BLOCK_FILE_PREFIX) || name.startsWith(COPY_FILE_PREFIX); } }); for (int i = 0; i < blockNames.length; i++) linkBlocks(new File(from, blockNames[i]), new File(to, blockNames[i]), oldLV); } | public static void compress(final File zip, final Map<InputStream, String> entries) throws IOException { if (zip == null || entries == null || CollectionUtils.isEmpty(entries.keySet())) throw new IllegalArgumentException("One ore more parameters are empty!"); if (zip.exists()) zip.delete(); else if (!zip.getParentFile().exists()) zip.getParentFile().mkdirs(); ZipOutputStream out = new ZipOutputStream(new BufferedOutputStream(new FileOutputStream(zip))); out.setLevel(Deflater.BEST_COMPRESSION); InputStream in = null; try { for (InputStream inputStream : entries.keySet()) { in = inputStream; ZipEntry zipEntry = new ZipEntry(skipBeginningSlash(entries.get(in))); out.putNextEntry(zipEntry); IOUtils.copy(in, out); out.closeEntry(); in.close(); } } finally { IOUtils.closeQuietly(in); IOUtils.closeQuietly(out); } } | 15,701 |
1 | public static String openldapDigestMd5(final String password) { String base64; try { MessageDigest digest = MessageDigest.getInstance("MD5"); digest.update(password.getBytes()); base64 = fr.cnes.sitools.util.Base64.encodeBytes(digest.digest()); } catch (NoSuchAlgorithmException e) { throw new RuntimeException(e); } return OPENLDAP_MD5_PREFIX + base64; } | static String encodeEmailAsUserId(String email) { try { MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.update(email.toLowerCase().getBytes()); StringBuilder builder = new StringBuilder(); builder.append("1"); for (byte b : md5.digest()) { builder.append(String.format("%02d", new Object[] { Integer.valueOf(b & 0xFF) })); } return builder.toString().substring(0, 20); } catch (NoSuchAlgorithmException ex) { } return ""; } | 15,702 |
0 | public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } } | public boolean checkPassword(String password, String digest) { boolean passwordMatch = false; MessageDigest sha = null; try { sha = MessageDigest.getInstance("SHA-1"); if (digest.regionMatches(true, 0, "{SHA}", 0, 5)) { digest = digest.substring(5); } else if (digest.regionMatches(true, 0, "{SSHA}", 0, 6)) { digest = digest.substring(6); } byte[][] hs = split(Base64.decode(digest.getBytes()), 20); byte[] hash = hs[0]; byte[] salt = hs[1]; sha.reset(); sha.update(password.getBytes()); sha.update(salt); byte[] pwhash = sha.digest(); if (MessageDigest.isEqual(hash, pwhash)) { passwordMatch = true; } } catch (NoSuchAlgorithmException nsae) { CofaxToolsUtil.log("Algorithme SHA-1 non supporte a la verification du password" + nsae + id); } return passwordMatch; } | 15,703 |
0 | private byte[] cacheInputStream(URL url) throws IOException { InputStream ins = url.openStream(); ByteArrayOutputStream bout = new ByteArrayOutputStream(); byte[] buf = new byte[256]; while (true) { int n = ins.read(buf); if (n == -1) break; bout.write(buf, 0, n); } return bout.toByteArray(); } | public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } } | 15,704 |
0 | @SuppressWarnings("static-access") public FastCollection<String> load(Link link) { URL url = null; FastCollection<String> links = new FastList<String>(); FTPClient ftp = null; try { String address = link.getURI(); address = JGetFileUtils.removeTrailingString(address, "/"); url = new URL(address); host = url.getHost(); String folder = url.getPath(); logger.info("Traversing: " + address); ftp = new FTPClient(host); if (!ftp.connected()) { ftp.connect(); } ftp.login("anonymous", "me@mymail.com"); logger.info("Connected to " + host + "."); logger.debug("changing dir to " + folder); ftp.chdir(folder); String[] files = ftp.dir(); for (String file : files) { links.add(address + "/" + file); } } catch (Exception e) { logger.error(e.getMessage()); logger.debug(e.getStackTrace()); } finally { try { ftp.quit(); } catch (Exception e) { logger.error("Failed to logout or disconnect from the ftp server: ftp://" + host); } } return links; } | public static AudioFileFormat getAudioFileFormat(URL url) throws UnsupportedAudioFileException, IOException { InputStream inputStream = null; if (useragent != null) { URLConnection myCon = url.openConnection(); myCon.setUseCaches(false); myCon.setDoInput(true); myCon.setDoOutput(true); myCon.setAllowUserInteraction(false); myCon.setRequestProperty("User-Agent", useragent); myCon.setRequestProperty("Accept", "*/*"); myCon.setRequestProperty("Icy-Metadata", "1"); myCon.setRequestProperty("Connection", "close"); inputStream = new BufferedInputStream(myCon.getInputStream()); } else { inputStream = new BufferedInputStream(url.openStream()); } try { if (DEBUG == true) { System.err.println("Using AppletMpegSPIWorkaround to get codec (AudioFileFormat:url)"); } return getAudioFileFormatForUrl(inputStream); } finally { inputStream.close(); } } | 15,705 |
0 | public boolean login() { if (super.isAuthenticated()) return true; try { if (client == null) { client = new FTPClient(); FTPClientConfig config = new FTPClientConfig(); client.configure(config); } if (!client.isConnected()) { client.connect(super.getStoreConfig().getServerName(), new Integer(super.getStoreConfig().getServerPort()).intValue()); } if (client.login(super.getStoreConfig().getUserName(), super.getStoreConfig().getPassword(), super.getStoreConfig().getServerName())) { super.setAuthenticated(true); return true; } log.error("Login ftp server error"); } catch (Exception e) { log.info("FTPStore.login", e); } return false; } | private IProject createCopyProject(IProject project, IWorkspace ws, IProgressMonitor pm) throws CoreException { pm.beginTask("Creating temp project", 1); final String pName = "translation_" + project.getName() + "_" + new Date().toString().replace(" ", "_").replace(":", "_"); final IProgressMonitor npm = new NullProgressMonitor(); final IPath destination = new Path(pName); project.copy(destination, false, npm); final IJavaProject oldJavaproj = JavaCore.create(project); final IClasspathEntry[] classPath = oldJavaproj.getRawClasspath(); final IProject newProject = ResourcesPlugin.getWorkspace().getRoot().getProject("NewProjectName"); final IProjectDescription desc = project.getDescription(); desc.setNatureIds(new String[] { JavaCore.NATURE_ID }); project.setDescription(desc, null); final IJavaProject javaproj = JavaCore.create(newProject); javaproj.setOutputLocation(project.getFullPath(), null); final List<IClasspathEntry> newClassPath = new ArrayList<IClasspathEntry>(); for (final IClasspathEntry cEntry : newClassPath) { switch(cEntry.getContentKind()) { case IClasspathEntry.CPE_SOURCE: System.out.println("Source folder " + cEntry.getPath()); break; default: newClassPath.add(cEntry); } } javaproj.setRawClasspath(classPath, pm); final IProject newP = ws.getRoot().getProject(pName); return newP; } | 15,706 |
1 | private static void readAndWriteFile(File source, File target) { try { FileInputStream in = new FileInputStream(source); FileOutputStream out = new FileOutputStream(target); int c; while ((c = in.read()) != -1) out.write(c); in.close(); out.close(); } catch (Exception e) { } } | public void readEntry(String name, InputStream input) throws Exception { File file = new File(this.directory, name); OutputStream output = new BufferedOutputStream(FileUtils.openOutputStream(file)); try { org.apache.commons.io.IOUtils.copy(input, output); } finally { output.close(); } } | 15,707 |
0 | private SecretKey getSecretKey() { try { String path = "/org.dbreplicator/repconsole/secretKey.obj"; java.net.URL url1 = getClass().getResource(path); ObjectInputStream ois = new ObjectInputStream(new BufferedInputStream(url1.openStream())); SecretKey sk = (SecretKey) ois.readObject(); return sk; } catch (IOException ex) { } catch (ClassNotFoundException ex) { } return null; } | @Override public void onCreate(Bundle savedInstanceState) { super.onCreate(savedInstanceState); TextView tv = new TextView(this); HttpClient client = new DefaultHttpClient(); HttpGet httpGetRequest = new HttpGet("http://www.google.com/"); String line = "", responseString = ""; try { HttpResponse response = client.execute(httpGetRequest); if (response.getStatusLine().getStatusCode() == HttpStatus.SC_OK) { BufferedReader br = new BufferedReader(new InputStreamReader(response.getEntity().getContent())); while ((line = br.readLine()) != null) { responseString += line; } br.close(); } } catch (ClientProtocolException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } tv.setText(responseString); setContentView(tv); } | 15,708 |
0 | public RemotePolicyMigrator createRemotePolicyMigrator() { return new RemotePolicyMigrator() { public String migratePolicy(InputStream stream, String url) throws ResourceMigrationException, IOException { ByteArrayOutputCreator oc = new ByteArrayOutputCreator(); IOUtils.copyAndClose(stream, oc.getOutputStream()); return oc.getOutputStream().toString(); } }; } | public boolean searchEntity(String login, String password, String searcheId, OutputStream os) throws SynchronizationException { HttpClient client = new SSLHttpClient(); try { StringBuilder builder = new StringBuilder(url).append("?" + CMD_PARAM + "=" + CMD_SEARCH).append("&" + LOGIN_PARAM + "=" + URLEncoder.encode(login, "UTF-8")).append("&" + PASSWD_PARAM + "=" + URLEncoder.encode(password, "UTF-8")).append("&" + SEARCH_PARAM + "=" + searcheId); HttpGet method = httpGetMethod(builder.toString()); HttpResponse response = client.execute(method); Header header = response.getFirstHeader(HEADER_NAME); if (header != null && HEADER_VALUE.equals(HEADER_VALUE)) { int code = response.getStatusLine().getStatusCode(); if (code == HttpStatus.SC_OK) { long expectedLength = response.getEntity().getContentLength(); InputStream is = response.getEntity().getContent(); FileUtils.writeInFile(is, os, expectedLength); return true; } else { throw new SynchronizationException("Command 'search' : HTTP error code returned." + code, SynchronizationException.ERROR_SEARCH); } } else { throw new SynchronizationException("HTTP header is invalid", SynchronizationException.ERROR_SEARCH); } } catch (Exception e) { throw new SynchronizationException("Command 'search' -> ", e, SynchronizationException.ERROR_SEARCH); } } | 15,709 |
0 | private void copyFile(File file, File dir) throws IOException { BufferedReader in = new BufferedReader(new FileReader(file)); BufferedWriter out = new BufferedWriter(new FileWriter(new File(dir.getAbsolutePath() + File.separator + file.getName()))); char[] buffer = new char[512]; int read = -1; while ((read = in.read(buffer)) > 0) { out.write(buffer, 0, read); } in.close(); out.close(); } | public static final int executeSql(final Connection conn, final String sql, final boolean rollback) throws SQLException { if (null == sql) return 0; Statement stmt = null; try { stmt = conn.createStatement(); final int updated = stmt.executeUpdate(sql); return updated; } catch (final SQLException e) { if (rollback) conn.rollback(); throw e; } finally { closeAll(null, stmt, null); } } | 15,710 |
1 | public static void copyFile(File srcFile, File dstFile) { logger.info("Create file : " + dstFile.getPath()); try { FileChannel srcChannel = new FileInputStream(srcFile).getChannel(); FileChannel dstChannel = new FileOutputStream(dstFile).getChannel(); dstChannel.transferFrom(srcChannel, 0, srcChannel.size()); srcChannel.close(); dstChannel.close(); } catch (IOException e) { e.printStackTrace(); } } | private void copyFile(File file, File dir) throws IOException { BufferedReader in = new BufferedReader(new FileReader(file)); BufferedWriter out = new BufferedWriter(new FileWriter(new File(dir.getAbsolutePath() + File.separator + file.getName()))); char[] buffer = new char[512]; int read = -1; while ((read = in.read(buffer)) > 0) { out.write(buffer, 0, read); } in.close(); out.close(); } | 15,711 |
1 | public void write(URL exportUrl, OutputStream output) throws Exception { if (exportUrl == null || output == null) { throw new DocumentListException("null passed in for required parameters"); } MediaContent mc = new MediaContent(); mc.setUri(exportUrl.toString()); MediaSource ms = service.getMedia(mc); InputStream input = ms.getInputStream(); IOUtils.copy(input, output); } | public static void copyFile(File src, File dest) throws IOException { FileInputStream fis = new FileInputStream(src); FileOutputStream fos = new FileOutputStream(dest); java.nio.channels.FileChannel channelSrc = fis.getChannel(); java.nio.channels.FileChannel channelDest = fos.getChannel(); channelSrc.transferTo(0, channelSrc.size(), channelDest); fis.close(); fos.close(); } | 15,712 |
1 | public static String md5(String input) throws NoSuchAlgorithmException, UnsupportedEncodingException { StringBuffer result = new StringBuffer(); MessageDigest md = MessageDigest.getInstance("MD5"); md.update(input.getBytes("utf-8")); byte[] digest = md.digest(); for (byte b : digest) { result.append(String.format("%02X ", b & 0xff)); } return result.toString(); } | public static boolean verify(final String password, final String encryptedPassword) { MessageDigest digest = null; int size = 0; String base64 = null; if (encryptedPassword.regionMatches(true, 0, "{CRYPT}", 0, 7)) { throw new InternalError("Not implemented"); } else if (encryptedPassword.regionMatches(true, 0, "{SHA}", 0, 5)) { size = 20; base64 = encryptedPassword.substring(5); try { digest = MessageDigest.getInstance("SHA-1"); } catch (final NoSuchAlgorithmException e) { throw new InternalError("Invalid algorithm"); } } else if (encryptedPassword.regionMatches(true, 0, "{SSHA}", 0, 6)) { size = 20; base64 = encryptedPassword.substring(6); try { digest = MessageDigest.getInstance("SHA-1"); } catch (final NoSuchAlgorithmException e) { throw new InternalError("Invalid algorithm"); } } else if (encryptedPassword.regionMatches(true, 0, "{MD5}", 0, 5)) { size = 16; base64 = encryptedPassword.substring(5); try { digest = MessageDigest.getInstance("MD5"); } catch (final NoSuchAlgorithmException e) { throw new InternalError("Invalid algorithm"); } } else if (encryptedPassword.regionMatches(true, 0, "{SMD5}", 0, 6)) { size = 16; base64 = encryptedPassword.substring(6); try { digest = MessageDigest.getInstance("MD5"); } catch (final NoSuchAlgorithmException e) { throw new InternalError("Invalid algorithm"); } } else { return false; } final byte[] data = Base64.decode(base64.toCharArray()); final byte[] orig = new byte[size]; System.arraycopy(data, 0, orig, 0, size); digest.reset(); digest.update(password.getBytes()); if (data.length > size) { digest.update(data, size, data.length - size); } return MessageDigest.isEqual(digest.digest(), orig); } | 15,713 |
0 | public static void copyFile(File source, String target) throws FileNotFoundException, IOException { File fout = new File(target); fout.mkdirs(); fout.delete(); fout = new File(target); FileChannel in = new FileInputStream(source).getChannel(); FileChannel out = new FileOutputStream(target).getChannel(); in.transferTo(0, in.size(), out); in.close(); out.close(); } | public PluginLoader(URL pluginLocation, ClassLoader loader) { Loader = loader; url = pluginLocation; try { if (url.toString().substring(0, 3).compareTo("http") == 0) { System.out.println("url location is =" + url.toString()); InputStream ips = url.openStream(); Reader r = new InputStreamReader(ips); ParserDelegator parser = new ParserDelegator(); HTMLEditorKit.ParserCallback callback = new HTMLEditorKit.ParserCallback() { public void handleText(char[] dat, int pos) { String data = new String(dat); if (accept(new File("."), data)) fileList.addElement(data); System.out.println("\ngot a file in list" + data); } }; parser.parse(r, callback, false); } else { file = new File(url.getPath()); System.out.println("File location is =" + file.getPath()); String[] tempList = file.list(this); for (int i = 0; i < tempList.length; i++) fileList.add(tempList[i]); } } catch (Exception e) { e.printStackTrace(); } classLoader = new SimpleClassLoader(url, Loader); System.out.println(file.getAbsolutePath()); fillVectors(); } | 15,714 |
0 | public static void main(String[] args) throws Exception { if (args.length != 2) { System.out.println("arguments: sourcefile destfile"); System.exit(1); } FileChannel in = new FileInputStream(args[0]).getChannel(), out = new FileOutputStream(args[1]).getChannel(); in.transferTo(0, in.size(), out); } | public synchronized FTPClient getFTPClient(String User, String Password) throws IOException { if (logger.isDebugEnabled()) { logger.debug("getFTPClient(String, String) - start"); } while ((counter >= maxClients)) { try { wait(); } catch (InterruptedException e) { logger.error("getFTPClient(String, String)", e); e.printStackTrace(); } } FTPClient result = null; String key = User.concat(Password); logger.debug("versuche vorhandenen FTPClient aus Liste zu lesen"); if (Clients != null) { if (Clients.containsKey(key)) { LinkedList ClientList = (LinkedList) Clients.get(key); if (!ClientList.isEmpty()) do { result = (FTPClient) ClientList.getLast(); logger.debug("-- hole einen Client aus der Liste: " + result.toString()); ClientList.removeLast(); if (!result.isConnected()) { logger.debug("---- nicht mehr verbunden."); result = null; } else { try { result.changeWorkingDirectory("/"); } catch (IOException e) { logger.debug("---- schmei�t Exception bei Zugriff."); result = null; } } } while (result == null && !ClientList.isEmpty()); if (ClientList.isEmpty()) { Clients.remove(key); } } else { } } else logger.debug("-- keine Liste vorhanden."); if (result == null) { logger.debug("Kein FTPCLient verf�gbar, erstelle einen neuen."); result = new FTPClient(); logger.debug("-- Versuche Connect"); result.connect(Host); logger.debug("-- Versuche Login"); result.login(User, Password); result.setFileType(FTPClient.BINARY_FILE_TYPE); if (counter == maxClients - 1) { RemoveBufferedClient(); } } logger.debug("OK: neuer FTPClient ist " + result.toString()); ; counter++; if (logger.isDebugEnabled()) { logger.debug("getFTPClient(String, String) - end"); } return result; } | 15,715 |
1 | void copyFile(File src, File dst) throws IOException { InputStream in = new FileInputStream(src); OutputStream out = new FileOutputStream(dst); byte[] buf = new byte[1024]; int len; while ((len = in.read(buf)) > 0) out.write(buf, 0, len); in.close(); out.close(); } | public void addEntry(InputStream jis, JarEntry entry) throws IOException, URISyntaxException { File target = new File(this.target.getPath() + entry.getName()).getAbsoluteFile(); if (!target.exists()) { target.createNewFile(); } if ((new File(this.source.toURI())).isDirectory()) { File sourceEntry = new File(this.source.getPath() + entry.getName()); FileInputStream fis = new FileInputStream(sourceEntry); byte[] classBytes = new byte[fis.available()]; fis.read(classBytes); (new FileOutputStream(target)).write(classBytes); } else { readwriteStreams(jis, (new FileOutputStream(target))); } } | 15,716 |
1 | public static void main(String[] args) throws IOException { System.setProperty("java.protocol.xfile", "com.luzan.common.nfs"); if (args.length < 1) usage(); final String cmd = args[0]; if ("delete".equalsIgnoreCase(cmd)) { final String path = getParameter(args, 1); XFile xfile = new XFile(path); if (!xfile.exists()) { System.out.print("File doean't exist.\n"); System.exit(1); } xfile.delete(); } else if ("copy".equalsIgnoreCase(cmd)) { final String pathFrom = getParameter(args, 1); final String pathTo = getParameter(args, 2); final XFile xfileFrom = new XFile(pathFrom); final XFile xfileTo = new XFile(pathTo); if (!xfileFrom.exists()) { System.out.print("File doesn't exist.\n"); System.exit(1); } final String mime = getParameter(args, 3, null); final XFileInputStream in = new XFileInputStream(xfileFrom); final XFileOutputStream xout = new XFileOutputStream(xfileTo); if (!StringUtils.isEmpty(mime)) { final com.luzan.common.nfs.s3.XFileExtensionAccessor xfa = ((com.luzan.common.nfs.s3.XFileExtensionAccessor) xfileTo.getExtensionAccessor()); if (xfa != null) { xfa.setMimeType(mime); xfa.setContentLength(xfileFrom.length()); } } IOUtils.copy(in, xout); xout.flush(); xout.close(); in.close(); } } | public static void main(String[] args) { File file = null; try { file = File.createTempFile("TestFileChannel", ".dat"); final ByteBuffer buffer = ByteBuffer.allocateDirect(4); final ByteChannel output = new FileOutputStream(file).getChannel(); buffer.putInt(MAGIC_INT); buffer.flip(); output.write(buffer); output.close(); final ByteChannel input = new FileInputStream(file).getChannel(); buffer.clear(); while (buffer.hasRemaining()) { input.read(buffer); } input.close(); buffer.flip(); final int file_int = buffer.getInt(); if (file_int != MAGIC_INT) { System.out.println("TestFileChannel FAILURE"); System.out.println("Wrote " + Integer.toHexString(MAGIC_INT) + " but read " + Integer.toHexString(file_int)); } else { System.out.println("TestFileChannel SUCCESS"); } } catch (Exception e) { System.out.println("TestFileChannel FAILURE"); e.printStackTrace(System.out); } finally { if (null != file) { file.delete(); } } } | 15,717 |
0 | public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; } | public void elimina(Cliente cli) throws errorSQL, errorConexionBD { System.out.println("GestorCliente.elimina()"); int id = cli.getId(); String sql; Statement stmt = null; try { gd.begin(); sql = "DELETE FROM cliente WHERE cod_cliente =" + id; System.out.println("Ejecutando: " + sql); stmt = gd.getConexion().createStatement(); stmt.executeUpdate(sql); System.out.println("executeUpdate"); sql = "DELETE FROM persona WHERE id =" + id; System.out.println("Ejecutando: " + sql); stmt.executeUpdate(sql); gd.commit(); System.out.println("commit"); stmt.close(); } catch (SQLException e) { gd.rollback(); throw new errorSQL(e.toString()); } catch (errorConexionBD e) { System.err.println("Error en GestorCliente.elimina(): " + e); } catch (errorSQL e) { System.err.println("Error en GestorCliente.elimina(): " + e); } } | 15,718 |
1 | public static void main(String[] args) throws IOException { String paramFileName = args[0]; BufferedReader inFile_params = new BufferedReader(new FileReader(paramFileName)); String cands_fileName = (inFile_params.readLine().split("\\s+"))[0]; String alignSrcCand_phrasal_fileName = (inFile_params.readLine().split("\\s+"))[0]; String alignSrcCand_word_fileName = (inFile_params.readLine().split("\\s+"))[0]; String source_fileName = (inFile_params.readLine().split("\\s+"))[0]; String trainSrc_fileName = (inFile_params.readLine().split("\\s+"))[0]; String trainTgt_fileName = (inFile_params.readLine().split("\\s+"))[0]; String trainAlign_fileName = (inFile_params.readLine().split("\\s+"))[0]; String alignCache_fileName = (inFile_params.readLine().split("\\s+"))[0]; String alignmentsType = "AlignmentGrids"; int maxCacheSize = 1000; inFile_params.close(); int numSentences = countLines(source_fileName); InputStream inStream_src = new FileInputStream(new File(source_fileName)); BufferedReader srcFile = new BufferedReader(new InputStreamReader(inStream_src, "utf8")); String[] srcSentences = new String[numSentences]; for (int i = 0; i < numSentences; ++i) { srcSentences[i] = srcFile.readLine(); } srcFile.close(); println("Creating src vocabulary @ " + (new Date())); srcVocab = new Vocabulary(); int[] sourceWordsSentences = Vocabulary.initializeVocabulary(trainSrc_fileName, srcVocab, true); int numSourceWords = sourceWordsSentences[0]; int numSourceSentences = sourceWordsSentences[1]; println("Reading src corpus @ " + (new Date())); srcCorpusArray = SuffixArrayFactory.createCorpusArray(trainSrc_fileName, srcVocab, numSourceWords, numSourceSentences); println("Creating src SA @ " + (new Date())); srcSA = SuffixArrayFactory.createSuffixArray(srcCorpusArray, maxCacheSize); println("Creating tgt vocabulary @ " + (new Date())); tgtVocab = new Vocabulary(); int[] targetWordsSentences = Vocabulary.initializeVocabulary(trainTgt_fileName, tgtVocab, true); int numTargetWords = targetWordsSentences[0]; int numTargetSentences = targetWordsSentences[1]; println("Reading tgt corpus @ " + (new Date())); tgtCorpusArray = SuffixArrayFactory.createCorpusArray(trainTgt_fileName, tgtVocab, numTargetWords, numTargetSentences); println("Creating tgt SA @ " + (new Date())); tgtSA = SuffixArrayFactory.createSuffixArray(tgtCorpusArray, maxCacheSize); int trainingSize = srcCorpusArray.getNumSentences(); if (trainingSize != tgtCorpusArray.getNumSentences()) { throw new RuntimeException("Source and target corpora have different number of sentences. This is bad."); } println("Reading alignment data @ " + (new Date())); alignments = null; if ("AlignmentArray".equals(alignmentsType)) { alignments = SuffixArrayFactory.createAlignments(trainAlign_fileName, srcSA, tgtSA); } else if ("AlignmentGrids".equals(alignmentsType) || "AlignmentsGrid".equals(alignmentsType)) { alignments = new AlignmentGrids(new Scanner(new File(trainAlign_fileName)), srcCorpusArray, tgtCorpusArray, trainingSize, true); } else if ("MemoryMappedAlignmentGrids".equals(alignmentsType)) { alignments = new MemoryMappedAlignmentGrids(trainAlign_fileName, srcCorpusArray, tgtCorpusArray); } if (!fileExists(alignCache_fileName)) { alreadyResolved_srcSet = new HashMap<String, TreeSet<Integer>>(); alreadyResolved_tgtSet = new HashMap<String, TreeSet<Integer>>(); } else { try { ObjectInputStream in = new ObjectInputStream(new FileInputStream(alignCache_fileName)); alreadyResolved_srcSet = (HashMap<String, TreeSet<Integer>>) in.readObject(); alreadyResolved_tgtSet = (HashMap<String, TreeSet<Integer>>) in.readObject(); in.close(); } catch (FileNotFoundException e) { System.err.println("FileNotFoundException in AlignCandidates.main(String[]): " + e.getMessage()); System.exit(99901); } catch (IOException e) { System.err.println("IOException in AlignCandidates.main(String[]): " + e.getMessage()); System.exit(99902); } catch (ClassNotFoundException e) { System.err.println("ClassNotFoundException in AlignCandidates.main(String[]): " + e.getMessage()); System.exit(99904); } } println("Processing candidates @ " + (new Date())); PrintWriter outFile_alignSrcCand_phrasal = new PrintWriter(alignSrcCand_phrasal_fileName); PrintWriter outFile_alignSrcCand_word = new PrintWriter(alignSrcCand_word_fileName); InputStream inStream_cands = new FileInputStream(new File(cands_fileName)); BufferedReader candsFile = new BufferedReader(new InputStreamReader(inStream_cands, "utf8")); String line = ""; String cand = ""; line = candsFile.readLine(); int countSatisfied = 0; int countAll = 0; int countSatisfied_sizeOne = 0; int countAll_sizeOne = 0; int prev_i = -1; String srcSent = ""; String[] srcWords = null; int candsRead = 0; int C50count = 0; while (line != null) { ++candsRead; println("Read candidate on line #" + candsRead); int i = toInt((line.substring(0, line.indexOf("|||"))).trim()); if (i != prev_i) { srcSent = srcSentences[i]; srcWords = srcSent.split("\\s+"); prev_i = i; println("New value for i: " + i + " seen @ " + (new Date())); C50count = 0; } else { ++C50count; } line = (line.substring(line.indexOf("|||") + 3)).trim(); cand = (line.substring(0, line.indexOf("|||"))).trim(); cand = cand.substring(cand.indexOf(" ") + 1, cand.length() - 1); JoshuaDerivationTree DT = new JoshuaDerivationTree(cand, 0); String candSent = DT.toSentence(); String[] candWords = candSent.split("\\s+"); String alignSrcCand = DT.alignments(); outFile_alignSrcCand_phrasal.println(alignSrcCand); println(" i = " + i + ", alignSrcCand: " + alignSrcCand); String alignSrcCand_res = ""; String[] linksSrcCand = alignSrcCand.split("\\s+"); for (int k = 0; k < linksSrcCand.length; ++k) { String link = linksSrcCand[k]; if (link.indexOf(',') == -1) { alignSrcCand_res += " " + link.replaceFirst("--", "-"); } else { alignSrcCand_res += " " + resolve(link, srcWords, candWords); } } alignSrcCand_res = alignSrcCand_res.trim(); println(" i = " + i + ", alignSrcCand_res: " + alignSrcCand_res); outFile_alignSrcCand_word.println(alignSrcCand_res); if (C50count == 50) { println("50C @ " + (new Date())); C50count = 0; } line = candsFile.readLine(); } outFile_alignSrcCand_phrasal.close(); outFile_alignSrcCand_word.close(); candsFile.close(); println("Finished processing candidates @ " + (new Date())); try { ObjectOutputStream out = new ObjectOutputStream(new FileOutputStream(alignCache_fileName)); out.writeObject(alreadyResolved_srcSet); out.writeObject(alreadyResolved_tgtSet); out.flush(); out.close(); } catch (IOException e) { System.err.println("IOException in AlignCandidates.main(String[]): " + e.getMessage()); System.exit(99902); } } | public void test() throws Exception { TranslationResponseStorage r = new TranslationResponseStorage(mockStorage, "UTF-8"); MockResponseStateObserver observer = new MockResponseStateObserver(); r.addStateObserver(observer); assertEquals("UTF-8", r.getCharacterEncoding()); assertEquals(-1L, r.getLastModified()); assertEquals(0, r.getTranslationCount()); r.setTranslationCount(10); assertEquals(10, r.getTranslationCount()); assertNotNull(r.getHeadersStorage()); assertNull(r.getHeaders()); r.setLastModified(100000L); assertEquals(100000L, r.getLastModified()); assertFalse(r.getHeaders().isEmpty()); { Set<ResponseHeader> set = new TreeSet<ResponseHeader>(); set.add(new ResponseHeaderImpl("Last-Modified", new String[] { DateUtil.formatDate(new Date(200000L)) })); r.addHeaders(set); } assertEquals(1, r.getHeaders().size()); assertEquals(200000L, r.getLastModified()); { Set<ResponseHeader> set = new TreeSet<ResponseHeader>(); set.add(new ResponseHeaderImpl("Last-Modified", new String[] { DateUtil.formatDate(new Date(310000L)) })); set.add(new ResponseHeaderImpl("User-Agent", new String[] { "Pinoccio" })); r.addHeaders(set); } assertEquals(2, r.getHeaders().size()); int ii = 0; for (ResponseHeader h : r.getHeaders()) { ii++; if (ii == 1) { assertEquals("Last-Modified", h.getName()); assertEquals(Arrays.toString(new String[] { DateUtil.formatDate(new Date(310000L)) }), Arrays.toString(h.getValues())); } else if (ii == 2) { assertEquals("User-Agent", h.getName()); assertEquals(Arrays.toString(new String[] { "Pinoccio" }), Arrays.toString(h.getValues())); } } r.addText("This is an example"); r.addText(" and another one."); assertEquals("This is an example and another one.", mockStorage.getText()); InputStream input = r.getInputStream(); StringWriter writer = new StringWriter(); try { IOUtils.copy(input, writer, "UTF-8"); } finally { input.close(); writer.close(); } assertEquals("This is an example and another one.", writer.toString()); { OutputStream output = r.getOutputStream(); output.write(" and another line".getBytes("UTF-8")); assertEquals("This is an example and another one. and another line", r.getText()); } { Writer output = r.getWriter(); output.write(" and write some more"); assertEquals("This is an example and another one. and another line and write some more", r.getText()); } assertFalse(r.hasEnded()); assertNull(r.getEndState()); assertEquals(0L, observer.getHits()); r.setEndState(ResponseStateOk.getInstance()); assertEquals(ResponseStateOk.getInstance(), r.getEndState()); assertTrue(r.hasEnded()); assertEquals(1L, observer.getHits()); try { r.getOutputStream(); fail("Previous line should throw IOException as result closed."); } catch (IOException e) { } try { r.getWriter(); fail("Previous line should throw IOException as result closed."); } catch (IOException e) { } } | 15,719 |
1 | @Override protected void doPost(HttpServletRequest request, HttpServletResponse response) throws ServletException { PrintWriter writer = null; InputStream is = null; FileOutputStream fos = null; try { writer = response.getWriter(); } catch (IOException ex) { log(OctetStreamReader.class.getName() + "has thrown an exception: " + ex.getMessage()); } String filename = request.getHeader("X-File-Name"); try { is = request.getInputStream(); fos = new FileOutputStream(new File(targetPath + filename)); IOUtils.copy(is, fos); response.setStatus(HttpServletResponse.SC_OK); writer.print("{success: true}"); } catch (FileNotFoundException ex) { response.setStatus(HttpServletResponse.SC_INTERNAL_SERVER_ERROR); writer.print("{success: false}"); log(OctetStreamReader.class.getName() + "has thrown an exception: " + ex.getMessage()); } catch (IOException ex) { response.setStatus(HttpServletResponse.SC_INTERNAL_SERVER_ERROR); writer.print("{success: false}"); log(OctetStreamReader.class.getName() + "has thrown an exception: " + ex.getMessage()); } finally { try { fos.close(); is.close(); } catch (IOException ignored) { } } writer.flush(); writer.close(); } | private void displayDiffResults() throws IOException { File outFile = File.createTempFile("diff", ".htm"); outFile.deleteOnExit(); FileOutputStream outStream = new FileOutputStream(outFile); BufferedWriter out = new BufferedWriter(new OutputStreamWriter(outStream)); out.write("<html><head><title>LOC Differences</title>\n" + SCRIPT + "</head>\n" + "<body bgcolor='#ffffff'>\n" + "<div onMouseOver=\"window.defaultStatus='Metrics'\">\n"); if (addedTable.length() > 0) { out.write("<table border><tr><th>Files Added:</th>" + "<th>Add</th><th>Type</th></tr>"); out.write(addedTable.toString()); out.write("</table><br><br>"); } if (modifiedTable.length() > 0) { out.write("<table border><tr><th>Files Modified:</th>" + "<th>Base</th><th>Del</th><th>Mod</th><th>Add</th>" + "<th>Total</th><th>Type</th></tr>"); out.write(modifiedTable.toString()); out.write("</table><br><br>"); } if (deletedTable.length() > 0) { out.write("<table border><tr><th>Files Deleted:</th>" + "<th>Del</th><th>Type</th></tr>"); out.write(deletedTable.toString()); out.write("</table><br><br>"); } out.write("<table name=METRICS BORDER>\n"); if (modifiedTable.length() > 0 || deletedTable.length() > 0) { out.write("<tr><td>Base: </td><td>"); out.write(Long.toString(base)); out.write("</td></tr>\n<tr><td>Deleted: </td><td>"); out.write(Long.toString(deleted)); out.write("</td></tr>\n<tr><td>Modified: </td><td>"); out.write(Long.toString(modified)); out.write("</td></tr>\n<tr><td>Added: </td><td>"); out.write(Long.toString(added)); out.write("</td></tr>\n<tr><td>New & Changed: </td><td>"); out.write(Long.toString(added + modified)); out.write("</td></tr>\n"); } out.write("<tr><td>Total: </td><td>"); out.write(Long.toString(total)); out.write("</td></tr>\n</table></div>"); redlinesOut.close(); out.flush(); InputStream redlines = new FileInputStream(redlinesTempFile); byte[] buffer = new byte[4096]; int bytesRead; while ((bytesRead = redlines.read(buffer)) != -1) outStream.write(buffer, 0, bytesRead); outStream.write("</BODY></HTML>".getBytes()); outStream.close(); Browser.launch(outFile.toURL().toString()); } | 15,720 |
0 | private void loadDefaultDrivers() { final URL url = _app.getResources().getDefaultDriversUrl(); try { InputStreamReader isr = new InputStreamReader(url.openStream()); try { _cache.load(isr); } finally { isr.close(); } } catch (Exception ex) { final Logger logger = _app.getLogger(); logger.showMessage(Logger.ILogTypes.ERROR, "Error loading default driver file: " + url != null ? url.toExternalForm() : ""); logger.showMessage(Logger.ILogTypes.ERROR, ex); } } | public InputStream getFtpInputStream() throws IOException { try { URL url = getURL(); URLConnection urlc = url.openConnection(); return urlc.getInputStream(); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } return null; } | 15,721 |
0 | static Collection<InetSocketAddress> getAddresses(Context ctx, long userId) throws Exception { AGLog.d(TAG, "Connecting to HTTP service to obtain IP addresses"); String host = (String) ctx.getResources().getText(R.string.gg_webservice_addr); String ver = App.getInstance().getGGClientVersion(); String url = host + "?fmnumber=" + Long.toString(userId) + "&lastmsg=0&version=" + ver; HttpClient httpClient = new DefaultHttpClient(); AGLog.d(TAG, "connecting to http service at " + url); HttpGet request = new HttpGet(url); HttpResponse response = httpClient.execute(request); AGLog.d(TAG, "response status:" + response.getStatusLine().getReasonPhrase()); HttpEntity ent = response.getEntity(); if (ent == null) { AGLog.e(TAG, "No response entity"); throw new ClientProtocolException("No response entity"); } InputStream content = ent.getContent(); BufferedReader reader = new BufferedReader(new InputStreamReader(content)); String line = reader.readLine(); AGLog.d(TAG, "response: " + line); StringTokenizer tokenizer = new StringTokenizer(line, " "); @SuppressWarnings("unused") String status = tokenizer.nextToken(); @SuppressWarnings("unused") String unknown = tokenizer.nextToken(); ArrayList<InetSocketAddress> result = new ArrayList<InetSocketAddress>(); while (tokenizer.hasMoreTokens()) { StringTokenizer addrport = new StringTokenizer(tokenizer.nextToken(), ":"); String addrStr = addrport.nextToken(); if (InetAddressUtils.isIPv4Address(addrStr)) { AGLog.d(TAG, "Address decoded successfully: " + addrStr); } else { AGLog.w(TAG, "Failed to decode address: " + addrStr); continue; } String portStr; if (addrport.hasMoreTokens()) { portStr = addrport.nextToken(); } else { portStr = (String) ctx.getResources().getText(R.string.gg_default_port); } AGLog.d(TAG, "Port decoded successfully: " + portStr); short port = Short.decode(portStr); result.add(new InetSocketAddress(addrStr, port)); } return result; } | String openUrlAsString(String address, int maxLines) { StringBuffer sb; try { URL url = new URL(address); InputStream in = url.openStream(); BufferedReader br = new BufferedReader(new InputStreamReader(in)); sb = new StringBuffer(); int count = 0; String line; while ((line = br.readLine()) != null && count++ < maxLines) sb.append(line + "\n"); in.close(); } catch (IOException e) { sb = null; } return sb != null ? new String(sb) : null; } | 15,722 |
0 | public void write(HttpServletRequest req, HttpServletResponse res, Object bean) throws IntrospectionException, IllegalAccessException, NoSuchMethodException, InvocationTargetException, IOException { res.setContentType(contentType); final Object r; if (HttpRpcServer.HttpRpcOutput.class.isAssignableFrom(bean.getClass())) { HttpRpcServer.HttpRpcOutput output = (HttpRpcServer.HttpRpcOutput) bean; r = output.getResult(); } else r = bean; if (r != null) { if (File.class.isAssignableFrom(r.getClass())) { File file = (File) r; InputStream in = null; try { in = new FileInputStream(file); IOUtils.copy(in, res.getOutputStream()); } finally { if (in != null) in.close(); } } else if (InputStream.class.isAssignableFrom(r.getClass())) { InputStream in = null; try { in = (InputStream) r; IOUtils.copy(in, res.getOutputStream()); } finally { if (in != null) in.close(); } } else if (XFile.class.isAssignableFrom(r.getClass())) { XFile file = (XFile) r; InputStream in = null; try { in = new XFileInputStream(file); IOUtils.copy(in, res.getOutputStream()); } finally { if (in != null) in.close(); } } res.getOutputStream().flush(); } } | public FTPClient sample2(String server, String username, String password) throws IllegalStateException, IOException, FTPIllegalReplyException, FTPException { FTPClient ftpClient = new FTPClient(); ftpClient.connect(server); ftpClient.login(username, password); return ftpClient; } | 15,723 |
1 | private byte[] hash(String toHash) { try { MessageDigest md5 = MessageDigest.getInstance("MD5", "BC"); md5.update(toHash.getBytes("ISO-8859-1")); return md5.digest(); } catch (Exception ex) { ex.printStackTrace(); return null; } } | private void getRandomGUID(boolean secure) { MessageDigest md5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(128); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { logger.error("Error: " + e); } try { long time = System.currentTimeMillis(); long rand = 0; if (secure) { rand = mySecureRand.nextLong(); } else { rand = myRand.nextLong(); } sbValueBeforeMD5.append(s_id); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte[] array = md5.digest(); StringBuffer sb = new StringBuffer(32); for (int j = 0; j < array.length; ++j) { int b = array[j] & TWO_BYTES; if (b < PAD_BELOW) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { logger.error("Error:" + e); } } | 15,724 |
1 | static String getMD5Hash(String str) throws NoSuchAlgorithmException { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(str.getBytes()); byte[] b = md.digest(); StringBuffer sb = new StringBuffer(); for (int i = 0; i < b.length; i++) { int v = (int) b[i]; v = v < 0 ? 0x100 + v : v; String cc = Integer.toHexString(v); if (cc.length() == 1) sb.append('0'); sb.append(cc); } return sb.toString(); } | public static String sha1Hash(String input) { try { MessageDigest sha1Digest = MessageDigest.getInstance("SHA-1"); sha1Digest.update(input.getBytes()); return byteArrayToString(sha1Digest.digest()); } catch (Exception e) { logger.error(e.getMessage(), e); } return ""; } | 15,725 |
1 | public int[] sort() { int i, tmp; int[] newIndex = new int[nrows]; for (i = 0; i < nrows; i++) { newIndex[i] = i; } boolean change = true; if (this.ascending) { if (data[0][column] instanceof Comparable) { while (change) { change = false; for (i = 0; i < nrows - 1; i++) { if (((Comparable) data[newIndex[i]][column]).compareTo((Comparable) data[newIndex[i + 1]][column]) > 0) { tmp = newIndex[i]; newIndex[i] = newIndex[i + 1]; newIndex[i + 1] = tmp; change = true; } } } return newIndex; } if (data[0][column] instanceof String || data[0][column] instanceof ClassLabel) { while (change) { change = false; for (i = 0; i < nrows - 1; i++) { if ((data[newIndex[i]][column].toString()).compareTo(data[newIndex[i + 1]][column].toString()) > 0) { tmp = newIndex[i]; newIndex[i] = newIndex[i + 1]; newIndex[i + 1] = tmp; change = true; } } } } return newIndex; } if (!this.ascending) { if (data[0][column] instanceof Comparable) { while (change) { change = false; for (i = 0; i < nrows - 1; i++) { if (((Comparable) data[newIndex[i]][column]).compareTo((Comparable) data[newIndex[i + 1]][column]) < 0) { tmp = newIndex[i]; newIndex[i] = newIndex[i + 1]; newIndex[i + 1] = tmp; change = true; } } } return newIndex; } if (data[0][column] instanceof String || data[0][column] instanceof ClassLabel) { while (change) { change = false; for (i = 0; i < nrows - 1; i++) { if ((data[newIndex[i]][column].toString()).compareTo(data[newIndex[i + 1]][column].toString()) < 0) { tmp = newIndex[i]; newIndex[i] = newIndex[i + 1]; newIndex[i + 1] = tmp; change = true; } } } } return newIndex; } else return newIndex; } | public void Sort(int a[]) { for (int i = a.length; --i >= 0; ) { for (int j = 0; j < i; j++) { if (a[j] > a[j + 1]) { int temp = a[j]; a[j] = a[j + 1]; a[j + 1] = temp; } } } } | 15,726 |
0 | public static byte[] SHA1(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("SHA-1"); byte[] sha1hash = new byte[40]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); sha1hash = md.digest(); return sha1hash; } | public static void copyFile(String sourceFilePath, String destFilePath) throws IOException { FileChannel in = null; FileChannel out = null; try { in = new FileInputStream(sourceFilePath).getChannel(); out = new FileOutputStream(destFilePath).getChannel(); long inputSize = in.size(); in.transferTo(0, inputSize, out); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, inputSize); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } } | 15,727 |
0 | @Override protected void setUp() throws Exception { super.setUp(); FTPConf = new FTPClientConfig(FTPClientConfig.SYST_UNIX); FTPConf.setServerTimeZoneId("GMT"); FTP.configure(FTPConf); try { FTP.connect("tgftp.nws.noaa.gov"); FTP.login("anonymous", "testing@apache.org"); FTP.changeWorkingDirectory("SL.us008001/DF.an/DC.sflnd/DS.metar"); FTP.enterLocalPassiveMode(); } catch (SocketException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } | public void execute() { File sourceFile = new File(oarfilePath); File destinationFile = new File(deploymentDirectory + File.separator + sourceFile.getName()); try { FileInputStream fis = new FileInputStream(sourceFile); FileOutputStream fos = new FileOutputStream(destinationFile); byte[] readArray = new byte[2048]; while (fis.read(readArray) != -1) { fos.write(readArray); } fis.close(); fos.flush(); fos.close(); } catch (IOException ioe) { logger.severe("failed to copy the file:" + ioe); } } | 15,728 |
0 | private static boolean initLOG4JProperties(String homeDir) { String Log4jURL = homeDir + LOG4J_URL; try { URL log4jurl = getURL(Log4jURL); InputStream inStreamLog4j = log4jurl.openStream(); Properties propertiesLog4j = new Properties(); try { propertiesLog4j.load(inStreamLog4j); PropertyConfigurator.configure(propertiesLog4j); } catch (IOException e) { e.printStackTrace(); } } catch (Exception e) { logger.info("Failed to initialize LOG4J with properties file."); return false; } return true; } | public static void copyFile(File in, File out) throws IOException { try { FileReader inf = new FileReader(in); OutputStreamWriter outf = new OutputStreamWriter(new FileOutputStream(out), "UTF-8"); int c; while ((c = inf.read()) != -1) outf.write(c); inf.close(); outf.close(); } catch (UnsupportedEncodingException e) { e.printStackTrace(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } | 15,729 |
0 | public void saveProjectFile(File aFile) { SimpleDateFormat sdf = new SimpleDateFormat("yyMMddHHmmss"); File destDir = new File(theProjectsDirectory, sdf.format(Calendar.getInstance().getTime())); if (destDir.mkdirs()) { File outFile = new File(destDir, "project.xml"); try { FileChannel sourceChannel = new FileInputStream(aFile).getChannel(); FileChannel destinationChannel = new FileOutputStream(outFile).getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel); sourceChannel.close(); destinationChannel.close(); } catch (IOException e) { e.printStackTrace(); } finally { aFile.delete(); } } } | public boolean checkConnection() { int tries = 3; for (int i = 0; i < tries; i++) { try { final URL url = new URL(wsURL); final URLConnection conn = url.openConnection(); conn.setReadTimeout(3000); conn.getContent(); return true; } catch (IOException ex) { Logger.getLogger(ExternalSalesHelper.class.getName()).log(Level.SEVERE, null, ex); } try { Thread.currentThread().sleep(2000); } catch (InterruptedException ex) { Logger.getLogger(OrdersSync.class.getName()).log(Level.SEVERE, null, ex); } } return false; } | 15,730 |
1 | public static String analyze(List<String> stackLines) { final MessageDigest messageDigest; try { messageDigest = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { return null; } final Iterator<String> iterator = stackLines.iterator(); if (!iterator.hasNext()) { return null; } try { final String messageLine = iterator.next(); final String exceptionClass = getExceptionClass(messageLine); messageDigest.update(exceptionClass.getBytes("UTF-8")); analyze(exceptionClass, iterator, messageDigest); final byte[] bytes = messageDigest.digest(); final BigInteger bigInt = new BigInteger(1, bytes); final String ret = bigInt.toString(36); return ret; } catch (UnsupportedEncodingException e) { throw new IllegalStateException(e.getMessage(), e); } } | public static String MD5(String text) { byte[] md5hash = new byte[32]; try { MessageDigest md; md = MessageDigest.getInstance("MD5"); md.update(text.getBytes("iso-8859-1"), 0, text.length()); md5hash = md.digest(); } catch (Exception e) { e.printStackTrace(); } return convertToHex(md5hash); } | 15,731 |
0 | public void postProcess() throws StopWriterVisitorException { dxfWriter.postProcess(); try { FileChannel fcinDxf = new FileInputStream(fTemp).getChannel(); FileChannel fcoutDxf = new FileOutputStream(m_Fich).getChannel(); DriverUtilities.copy(fcinDxf, fcoutDxf); fTemp.delete(); } catch (FileNotFoundException e) { throw new StopWriterVisitorException(getName(), e); } catch (IOException e) { throw new StopWriterVisitorException(getName(), e); } } | @Override public void vote(String urlString, Map<String, String> headData, Map<String, String> paramData) { HttpURLConnection httpConn = null; try { URL url = new URL(urlString); httpConn = (HttpURLConnection) url.openConnection(); String cookies = getCookies(httpConn); System.out.println(cookies); BufferedReader post = new BufferedReader(new InputStreamReader(httpConn.getInputStream(), "GB2312")); String text = null; while ((text = post.readLine()) != null) { System.out.println(text); } } catch (MalformedURLException e) { e.printStackTrace(); throw new VoteBeanException("网址不正确", e); } catch (IOException e) { e.printStackTrace(); throw new VoteBeanException("不能打开网址", e); } } | 15,732 |
0 | public void setRandom(boolean random) { this.random = random; if (random) { possibleScores = new int[NUM_SCORES]; for (int i = 0; i < NUM_SCORES - 1; i++) { getRandomScore: while (true) { int score = (int) (Math.random() * 20) + 1; for (int j = 0; j < i; j++) { if (score == possibleScores[j]) { continue getRandomScore; } } possibleScores[i] = score; break; } } possibleScores[NUM_SCORES - 1] = 25; boolean sorted = false; while (!sorted) { sorted = true; for (int i = 0; i < NUM_SCORES - 1; i++) { if (possibleScores[i] > possibleScores[i + 1]) { int t = possibleScores[i]; possibleScores[i] = possibleScores[i + 1]; possibleScores[i + 1] = t; sorted = false; } } } setPossibleScores(possibleScores); } } | public int read(String name) { status = STATUS_OK; try { name = name.trim().toLowerCase(); if ((name.indexOf("file:") >= 0) || (name.indexOf(":/") > 0)) { URL url = new URL(name); in = new BufferedInputStream(url.openStream()); } else { in = new BufferedInputStream(new FileInputStream(name)); } status = read(in); } catch (IOException e) { status = STATUS_OPEN_ERROR; } return status; } | 15,733 |
1 | public String getResourceAsString(String name) throws IOException { String content = null; InputStream stream = aClass.getResourceAsStream(name); if (stream != null) { ByteArrayOutputStream buffer = new ByteArrayOutputStream(); IOUtils.copyAndClose(stream, buffer); content = buffer.toString(); } else { Assert.fail("Resource not available: " + name); } return content; } | public static void ExtraeArchivoJAR(String Archivo, String DirJAR, String DirDestino) { FileInputStream entrada = null; FileOutputStream salida = null; try { File f = new File(DirDestino + separador + Archivo); try { f.createNewFile(); } catch (Exception sad) { sad.printStackTrace(); } InputStream source = OP_Proced.class.getResourceAsStream(DirJAR + "/" + Archivo); BufferedInputStream in = new BufferedInputStream(source); FileOutputStream out = new FileOutputStream(f); int ch; while ((ch = in.read()) != -1) out.write(ch); in.close(); out.close(); } catch (IOException ex) { System.out.println(ex); } finally { if (entrada != null) { try { entrada.close(); } catch (IOException ex) { ex.printStackTrace(); } } if (salida != null) { try { salida.close(); } catch (IOException ex) { ex.printStackTrace(); } } } } | 15,734 |
0 | private void validateODFDoc(String url, String ver, ValidationReport commentary) throws IOException, MalformedURLException { logger.debug("Beginning document validation ..."); synchronized (ODFValidationSession.class) { PropertyMapBuilder builder = new PropertyMapBuilder(); String[] segments = url.split("/"); CommentatingErrorHandler h = new CommentatingErrorHandler(commentary, segments[segments.length - 1]); ValidateProperty.ERROR_HANDLER.put(builder, h); ValidationDriver driver = new ValidationDriver(builder.toPropertyMap()); InputStream candidateStream = null; try { logger.debug("Loading schema version " + ver); byte[] schemaBytes = getSchemaForVersion(ver); driver.loadSchema(new InputSource(new ByteArrayInputStream(schemaBytes))); URLConnection conn = new URL(url).openConnection(); candidateStream = conn.getInputStream(); logger.debug("Calling validate()"); commentary.incIndent(); boolean isValid = driver.validate(new InputSource(candidateStream)); logger.debug("Errors in instance:" + h.getInstanceErrCount()); if (h.getInstanceErrCount() > CommentatingErrorHandler.THRESHOLD) { commentary.addComment("(<i>" + (h.getInstanceErrCount() - CommentatingErrorHandler.THRESHOLD) + " error(s) omitted for the sake of brevity</i>)"); } commentary.decIndent(); if (isValid) { commentary.addComment("The document is valid"); } else { commentary.addComment("ERROR", "The document is invalid"); } } catch (SAXException e) { commentary.addComment("FATAL", "The resource is not conformant XML: " + e.getMessage()); logger.error(e.getMessage()); } finally { Utils.streamClose(candidateStream); } } } | public void testGetContentInputStream() { URL url; try { url = new URL("http://www.wurzer.org/" + "Homepage/Publikationen/Eintrage/2009/10/7_Wissen_dynamisch_organisieren_files/" + "KnowTech%202009%20-%20Wissen%20dynamisch%20organisieren.pdf"); InputStream in = url.openStream(); Content c = provider.getContent(in); assertNotNull(c); assertTrue(!c.getFulltext().isEmpty()); assertTrue(c.getModificationDate() < System.currentTimeMillis()); assertTrue(c.getAttributes().size() > 0); assertEquals("KnowTech 2009 - Wissen dynamisch organisieren", c.getAttributeByName("Title").getValue()); assertEquals("Joerg Wurzer", c.getAttributeByName("Author").getValue()); assertEquals("Pages", c.getAttributeByName("Creator").getValue()); assertNull(c.getAttributeByName("Keywords")); assertTrue(c.getFulltext().startsWith("Wissen dynamisch organisieren")); assertTrue(c.getAttributeByName("Author").isKey()); assertTrue(!c.getAttributeByName("Producer").isKey()); } catch (MalformedURLException e) { fail("Malformed url - " + e.getMessage()); } catch (IOException e) { fail("Couldn't read file - " + e.getMessage()); } } | 15,735 |
1 | public void copieFichier(String fileIn, String fileOut) { FileChannel in = null; FileChannel out = null; try { in = new FileInputStream(fileIn).getChannel(); out = new FileOutputStream(fileOut).getChannel(); in.transferTo(0, in.size(), out); } catch (Exception e) { e.printStackTrace(); } finally { if (in != null) { try { in.close(); } catch (IOException e) { } } if (out != null) { try { out.close(); } catch (IOException e) { } } } } | private String processFileUploadOperation(boolean isH264File) { String fileType = this.uploadFileFileName.substring(this.uploadFileFileName.lastIndexOf('.')); int uniqueHashCode = UUID.randomUUID().toString().hashCode(); if (uniqueHashCode < 0) { uniqueHashCode *= -1; } String randomFileName = uniqueHashCode + fileType; String fileName = (isH264File) ? getproperty("videoDraftPath") : getproperty("videoDraftPathForNonH264") + randomFileName; File targetVideoPath = new File(fileName + randomFileName); System.out.println("Path: " + targetVideoPath.getAbsolutePath()); try { targetVideoPath.createNewFile(); FileChannel outStreamChannel = new FileOutputStream(targetVideoPath).getChannel(); FileChannel inStreamChannel = new FileInputStream(this.uploadFile).getChannel(); inStreamChannel.transferTo(0, inStreamChannel.size(), outStreamChannel); outStreamChannel.close(); inStreamChannel.close(); return randomFileName; } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } return null; } | 15,736 |
1 | public MemoryTextBody(InputStream is, String mimeCharset) throws IOException { this.mimeCharset = mimeCharset; TempPath tempPath = TempStorage.getInstance().getRootTempPath(); ByteArrayOutputStream out = new ByteArrayOutputStream(); IOUtils.copy(is, out); out.close(); tempFile = out.toByteArray(); } | public int extract() throws Exception { int count = 0; if (VERBOSE) System.out.println("IAAE:Extractr.extract: getting ready to extract " + getArtDir().toString()); ITCFileFilter iff = new ITCFileFilter(); RecursiveFileIterator rfi = new RecursiveFileIterator(getArtDir(), iff); FileTypeDeterminer ftd = new FileTypeDeterminer(); File artFile = null; File targetFile = null; broadcastStart(); while (rfi.hasMoreElements()) { artFile = (File) rfi.nextElement(); targetFile = getTargetFile(artFile); if (VERBOSE) System.out.println("IAAE:Extractr.extract: working ont " + artFile.toString()); BufferedInputStream in = null; BufferedOutputStream out = null; try { in = new BufferedInputStream((new FileInputStream(artFile))); out = new BufferedOutputStream((new FileOutputStream(targetFile))); byte[] buffer = new byte[10240]; int read = 0; int total = 0; read = in.read(buffer); while (read != -1) { if ((total <= 491) && (read > 491)) { out.write(buffer, 492, (read - 492)); } else if ((total <= 491) && (read <= 491)) { } else { out.write(buffer, 0, read); } total = total + read; read = in.read(buffer); } } catch (Exception e) { e.printStackTrace(); broadcastFail(); } finally { in.close(); out.close(); } broadcastSuccess(); count++; } broadcastDone(); return count; } | 15,737 |
1 | private static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } } | public static void copyFile(String file1, String file2) { File filedata1 = new java.io.File(file1); if (filedata1.exists()) { try { BufferedOutputStream out = new BufferedOutputStream(new FileOutputStream(file2)); BufferedInputStream in = new BufferedInputStream(new FileInputStream(file1)); try { int read; while ((read = in.read()) != -1) { out.write(read); } out.flush(); } catch (IOException ex1) { ex1.printStackTrace(); } finally { out.close(); in.close(); } } catch (Exception ex) { ex.printStackTrace(); } } } | 15,738 |
1 | private String extractFileFromZip(ZipFile zip, String fileName) throws IOException { String contents = null; ZipEntry entry = zip.getEntry(fileName); if (entry != null) { InputStream input = zip.getInputStream(entry); ByteArrayOutputStream buffer = new ByteArrayOutputStream(); IOUtils.copyAndClose(input, buffer); contents = buffer.toString(); } return contents; } | public static boolean copyFile(File sourceFile, File destinationFile) { boolean copySuccessfull = false; FileChannel source = null; FileChannel destination = null; try { source = new FileInputStream(sourceFile).getChannel(); destination = new FileOutputStream(destinationFile).getChannel(); long transferedBytes = destination.transferFrom(source, 0, source.size()); copySuccessfull = transferedBytes == source.size() ? true : false; } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } finally { if (source != null) { try { source.close(); } catch (IOException e) { e.printStackTrace(); } } if (destination != null) { try { destination.close(); } catch (IOException e) { e.printStackTrace(); } } } return copySuccessfull; } | 15,739 |
1 | private String MD5Sum(String input) { String hashtext = null; try { MessageDigest md = MessageDigest.getInstance("MD5"); md.reset(); md.update(input.getBytes()); byte[] digest = md.digest(); BigInteger bigInt = new BigInteger(1, digest); hashtext = bigInt.toString(16); while (hashtext.length() < 32) { hashtext = "0" + hashtext; } } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } return hashtext; } | private String buildShaHashOf(String source) { try { MessageDigest md = MessageDigest.getInstance("SHA"); md.update(source.getBytes()); return new BigInteger(1, md.digest()).toString(16); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); return ""; } } | 15,740 |
1 | public List<Template> getTemplatesByKeywordsAndPage(String keywords, int page) { String newKeywords = keywords; if (keywords == null || keywords.trim().length() == 0) { newKeywords = TemplateService.NO_KEYWORDS; } List<Template> templates = new ArrayList<Template>(); String restURL = configuration.getBeehiveRESTRootUrl() + "templates/keywords/" + newKeywords + "/page/" + page; HttpGet httpGet = new HttpGet(restURL); httpGet.setHeader("Accept", "application/json"); this.addAuthentication(httpGet); HttpClient httpClient = new DefaultHttpClient(); try { HttpResponse response = httpClient.execute(httpGet); if (response.getStatusLine().getStatusCode() != HttpServletResponse.SC_OK) { if (response.getStatusLine().getStatusCode() == HttpServletResponse.SC_UNAUTHORIZED) { throw new NotAuthenticatedException("User " + userService.getCurrentUser().getUsername() + " not authenticated! "); } throw new BeehiveNotAvailableException("Beehive is not available right now! "); } InputStreamReader reader = new InputStreamReader(response.getEntity().getContent()); BufferedReader buffReader = new BufferedReader(reader); StringBuilder sb = new StringBuilder(); String line = ""; while ((line = buffReader.readLine()) != null) { sb.append(line); sb.append("\n"); } String result = sb.toString(); TemplateList templateList = buildTemplateListFromJson(result); List<TemplateDTO> dtoes = templateList.getTemplates(); for (TemplateDTO dto : dtoes) { templates.add(dto.toTemplate()); } } catch (IOException e) { throw new BeehiveNotAvailableException("Failed to get template list, The beehive is not available right now ", e); } return templates; } | protected String readFileUsingHttp(String fileUrlName) { String response = ""; try { URL url = new URL(fileUrlName); URLConnection connection = url.openConnection(); HttpURLConnection httpConn = (HttpURLConnection) connection; httpConn.setRequestProperty("Content-Type", "text/html"); httpConn.setRequestProperty("Content-Length", "0"); httpConn.setRequestMethod("GET"); httpConn.setDoOutput(true); httpConn.setDoInput(true); httpConn.setAllowUserInteraction(false); InputStreamReader isr = new InputStreamReader(httpConn.getInputStream()); BufferedReader in = new BufferedReader(isr); String inputLine = ""; while ((inputLine = in.readLine()) != null) { response += inputLine + "\n"; } if (response.endsWith("\n")) { response = response.substring(0, response.length() - 1); } in.close(); } catch (Exception x) { x.printStackTrace(); } return response; } | 15,741 |
0 | boolean getHTML(URL url) { html = ""; int r; BufferedInputStream in = null; BufferedInputStream imgIn = null; boolean retry; Vector imageRd = new Vector(0); do { retry = false; try { in = new BufferedInputStream(url.openStream(), 4096); } catch (IOException ioe) { rbe.stats.error("Unable to open URL.", url.toExternalForm()); ioe.printStackTrace(); retry = true; continue; } try { while ((r = in.read(buffer, 0, buffer.length)) != -1) { if (r > 0) { html = html + new String(buffer, 0, r); } } } catch (IOException ioe) { rbe.stats.error("Unable to read HTML from URL.", url.toExternalForm()); retry = true; continue; } if (retry) { try { if (waitKey) { rbe.getKey(); } else { sleep(1000L); } } catch (InterruptedException inte) { System.out.println("In getHTML, caught interrupted exception!"); return true; } } } while (retry); try { in.close(); } catch (IOException ioe) { rbe.stats.error("Unable to close URL.", url.toExternalForm()); } if (DEBUG > 0) { } if (DEBUG > 10) { System.out.println(html); } int cur = 0; if (!RBE.getImage) return true; findImg(html, url, imgPat, srcPat, quotePat, imageRd); findImg(html, url, inputPat, srcPat, quotePat, imageRd); if (DEBUG > 2) { System.out.println("Found " + imageRd.size() + " images."); } while (imageRd.size() > 0) { int max = imageRd.size(); int min = Math.max(max - rbe.maxImageRd, 0); int i; try { for (i = min; i < max; i++) { ImageReader rd = (ImageReader) imageRd.elementAt(i); if (!rd.readImage()) { if (DEBUG > 2) { System.out.println("Read " + rd.tot + " bytes from " + rd.imgURLStr); } imageRd.removeElementAt(i); i--; max--; } } } catch (InterruptedException inte) { System.out.println("In getHTML, caught interrupted exception!"); return true; } } return true; } | private static void loadQueryProcessorFactories() { qpFactoryMap = new HashMap<String, QueryProcessorFactoryIF>(); Enumeration<URL> resources = null; try { resources = QueryUtils.class.getClassLoader().getResources(RESOURCE_STRING); } catch (IOException e) { log.error("Error while trying to look for " + "QueryProcessorFactoryIF implementations.", e); } while (resources != null && resources.hasMoreElements()) { URL url = resources.nextElement(); InputStream is = null; try { is = url.openStream(); } catch (IOException e) { log.warn("Error opening stream to QueryProcessorFactoryIF service description.", e); } if (is != null) { BufferedReader rdr = new BufferedReader(new InputStreamReader(is)); String line; try { while ((line = rdr.readLine()) != null) { try { ClassLoader classLoader = Thread.currentThread().getContextClassLoader(); Class<?> c = Class.forName(line, true, classLoader); if (QueryProcessorFactoryIF.class.isAssignableFrom(c)) { QueryProcessorFactoryIF factory = (QueryProcessorFactoryIF) c.newInstance(); qpFactoryMap.put(factory.getQueryLanguage().toUpperCase(), factory); } else { log.warn("Wrong entry for QueryProcessorFactoryIF service " + "description, '" + line + "' is not implementing the " + "correct interface."); } } catch (Exception e) { log.warn("Could not create an instance for " + "QueryProcessorFactoryIF service '" + line + "'."); } } } catch (IOException e) { log.warn("Could not read from QueryProcessorFactoryIF " + "service descriptor.", e); } } } if (!qpFactoryMap.containsKey(DEFAULT_LANGUAGE)) { qpFactoryMap.put(DEFAULT_LANGUAGE, new TologQueryProcessorFactory()); } } | 15,742 |
1 | public void copyFileFromLocalMachineToRemoteMachine(InputStream source, File destination) throws Exception { String fileName = destination.getPath(); File f = new File(getFtpServerHome(), "" + System.currentTimeMillis()); f.deleteOnExit(); org.apache.commons.io.IOUtils.copy(source, new FileOutputStream(f)); remoteHostClient.setAscii(isAscii()); remoteHostClient.setPromptOn(isPrompt()); remoteHostClient.copyFileFromLocalMachineToRemoteClient(f.getName(), fileName); } | private void addAuditDatastream() throws ObjectIntegrityException, StreamIOException { if (m_obj.getAuditRecords().size() == 0) { return; } String dsId = m_pid.toURI() + "/AUDIT"; String dsvId = dsId + "/" + DateUtility.convertDateToString(m_obj.getCreateDate()); Entry dsEntry = m_feed.addEntry(); dsEntry.setId(dsId); dsEntry.setTitle("AUDIT"); dsEntry.setUpdated(m_obj.getCreateDate()); dsEntry.addCategory(MODEL.STATE.uri, "A", null); dsEntry.addCategory(MODEL.CONTROL_GROUP.uri, "X", null); dsEntry.addCategory(MODEL.VERSIONABLE.uri, "false", null); dsEntry.addLink(dsvId, Link.REL_ALTERNATE); Entry dsvEntry = m_feed.addEntry(); dsvEntry.setId(dsvId); dsvEntry.setTitle("AUDIT.0"); dsvEntry.setUpdated(m_obj.getCreateDate()); ThreadHelper.addInReplyTo(dsvEntry, m_pid.toURI() + "/AUDIT"); dsvEntry.addCategory(MODEL.FORMAT_URI.uri, AUDIT1_0.uri, null); dsvEntry.addCategory(MODEL.LABEL.uri, "Audit Trail for this object", null); if (m_format.equals(ATOM_ZIP1_1)) { String name = "AUDIT.0.xml"; try { m_zout.putNextEntry(new ZipEntry(name)); Reader r = new StringReader(DOTranslationUtility.getAuditTrail(m_obj)); IOUtils.copy(r, m_zout, m_encoding); m_zout.closeEntry(); r.close(); } catch (IOException e) { throw new StreamIOException(e.getMessage(), e); } IRI iri = new IRI(name); dsvEntry.setSummary("AUDIT.0"); dsvEntry.setContent(iri, "text/xml"); } else { dsvEntry.setContent(DOTranslationUtility.getAuditTrail(m_obj), "text/xml"); } } | 15,743 |
0 | @Override public int write(FileStatus.FileTrackingStatus fileStatus, InputStream input, PostWriteAction postWriteAction) throws WriterException, InterruptedException { String key = logFileNameExtractor.getFileName(fileStatus); int wasWritten = 0; FileOutputStreamPool fileOutputStreamPool = fileOutputStreamPoolFactory.getPoolForKey(key); RollBackOutputStream outputStream = null; File file = null; try { file = getOutputFile(key); lastWrittenFile = file; outputStream = fileOutputStreamPool.open(key, compressionCodec, file, true); outputStream.mark(); wasWritten = IOUtils.copy(input, outputStream); if (postWriteAction != null) { postWriteAction.run(wasWritten); } } catch (Throwable t) { LOG.error(t.toString(), t); if (outputStream != null && wasWritten > 0) { LOG.error("Rolling back file " + file.getAbsolutePath()); try { outputStream.rollback(); } catch (IOException e) { throwException(e); } catch (InterruptedException e) { throw e; } } throwException(t); } finally { try { fileOutputStreamPool.releaseFile(key); } catch (IOException e) { throwException(e); } } return wasWritten; } | public static String getMD5(String text) { if (text == null) { return null; } String result = null; try { MessageDigest md5 = MessageDigest.getInstance(ALG_MD5); md5.update(text.getBytes(ENCODING)); result = "" + new BigInteger(1, md5.digest()).toString(16); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } catch (UnsupportedEncodingException e) { e.printStackTrace(); } return result; } | 15,744 |
1 | private void simulate() throws Exception { BufferedWriter out = null; out = new BufferedWriter(new FileWriter(outFile)); out.write("#Thread\tReputation\tAction\n"); out.flush(); System.out.println("Simulate..."); File file = new File(trsDemoSimulationfile); ObtainUserReputation obtainUserReputationRequest = new ObtainUserReputation(); ObtainUserReputationResponse obtainUserReputationResponse; RateUser rateUserRequest; RateUserResponse rateUserResponse; FileInputStream fis = new FileInputStream(file); BufferedReader br = new BufferedReader(new InputStreamReader(fis)); String call = br.readLine(); while (call != null) { rateUserRequest = generateRateUserRequest(call); try { rateUserResponse = trsPort.rateUser(rateUserRequest); System.out.println("----------------R A T I N G-------------------"); System.out.println("VBE: " + rateUserRequest.getVbeId()); System.out.println("VO: " + rateUserRequest.getVoId()); System.out.println("USER: " + rateUserRequest.getUserId()); System.out.println("SERVICE: " + rateUserRequest.getServiceId()); System.out.println("ACTION: " + rateUserRequest.getActionId()); System.out.println("OUTCOME: " + rateUserResponse.isOutcome()); System.out.println("----------------------------------------------"); assertEquals("The outcome field of the rateUser should be true: MESSAGE=" + rateUserResponse.getMessage(), true, rateUserResponse.isOutcome()); } catch (RemoteException e) { fail(e.getMessage()); } obtainUserReputationRequest.setIoi(null); obtainUserReputationRequest.setServiceId(null); obtainUserReputationRequest.setUserId(rateUserRequest.getUserId()); obtainUserReputationRequest.setVbeId(rateUserRequest.getVbeId()); obtainUserReputationRequest.setVoId(null); try { obtainUserReputationResponse = trsPort.obtainUserReputation(obtainUserReputationRequest); System.out.println("-----------R E P U T A T I O N----------------"); System.out.println("VBE: " + obtainUserReputationRequest.getVbeId()); System.out.println("VO: " + obtainUserReputationRequest.getVoId()); System.out.println("USER: " + obtainUserReputationRequest.getUserId()); System.out.println("SERVICE: " + obtainUserReputationRequest.getServiceId()); System.out.println("IOI: " + obtainUserReputationRequest.getIoi()); System.out.println("REPUTATION: " + obtainUserReputationResponse.getReputation()); System.out.println("----------------------------------------------"); assertEquals("The outcome field of the obtainUserReputation should be true: MESSAGE=" + obtainUserReputationResponse.getMessage(), true, obtainUserReputationResponse.isOutcome()); assertEquals(0.0, obtainUserReputationResponse.getReputation(), 1.0); } catch (RemoteException e) { fail(e.getMessage()); } obtainUserReputationRequest.setIoi(null); obtainUserReputationRequest.setServiceId(null); obtainUserReputationRequest.setUserId(rateUserRequest.getUserId()); obtainUserReputationRequest.setVbeId(rateUserRequest.getVbeId()); obtainUserReputationRequest.setVoId(rateUserRequest.getVoId()); try { obtainUserReputationResponse = trsPort.obtainUserReputation(obtainUserReputationRequest); System.out.println("-----------R E P U T A T I O N----------------"); System.out.println("VBE: " + obtainUserReputationRequest.getVbeId()); System.out.println("VO: " + obtainUserReputationRequest.getVoId()); System.out.println("USER: " + obtainUserReputationRequest.getUserId()); System.out.println("SERVICE: " + obtainUserReputationRequest.getServiceId()); System.out.println("IOI: " + obtainUserReputationRequest.getIoi()); System.out.println("REPUTATION: " + obtainUserReputationResponse.getReputation()); System.out.println("----------------------------------------------"); assertEquals("The outcome field of the obtainUserReputation should be true: MESSAGE=" + obtainUserReputationResponse.getMessage(), true, obtainUserReputationResponse.isOutcome()); assertEquals(0.0, obtainUserReputationResponse.getReputation(), 1.0); } catch (RemoteException e) { fail(e.getMessage()); } call = br.readLine(); } fis.close(); br.close(); out.flush(); out.close(); } | public static void copyResourceToFile(Class owningClass, String resourceName, File destinationDir) { final byte[] resourceBytes = readResource(owningClass, resourceName); final ByteArrayInputStream inputStream = new ByteArrayInputStream(resourceBytes); final File destinationFile = new File(destinationDir, resourceName); final FileOutputStream fileOutputStream; try { fileOutputStream = new FileOutputStream(destinationFile); } catch (FileNotFoundException e) { throw new RuntimeException(e); } try { IOUtils.copy(inputStream, fileOutputStream); } catch (IOException e) { throw new RuntimeException(e); } } | 15,745 |
1 | public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; } | public RepeatStatus execute(StepContribution contribution, ChunkContext chunkContext) throws Exception { ZipInputStream zis = new ZipInputStream(new BufferedInputStream(inputResource.getInputStream())); File targetDirectoryAsFile = new File(targetDirectory); if (!targetDirectoryAsFile.exists()) { FileUtils.forceMkdir(targetDirectoryAsFile); } File target = new File(targetDirectory, targetFile); BufferedOutputStream dest = null; while (zis.getNextEntry() != null) { if (!target.exists()) { target.createNewFile(); } FileOutputStream fos = new FileOutputStream(target); dest = new BufferedOutputStream(fos); IOUtils.copy(zis, dest); dest.flush(); dest.close(); } zis.close(); if (!target.exists()) { throw new IllegalStateException("Could not decompress anything from the archive!"); } return RepeatStatus.FINISHED; } | 15,746 |
0 | public void apop(String user, char[] secret) throws IOException, POP3Exception { if (timestamp == null) { throw new CommandNotSupportedException("No timestamp from server - APOP not possible"); } try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(timestamp.getBytes()); if (secret == null) secret = new char[0]; byte[] digest = md.digest(new String(secret).getBytes("ISO-8859-1")); mutex.lock(); sendCommand("APOP", new String[] { user, digestToString(digest) }); POP3Response response = readSingleLineResponse(); if (!response.isOK()) { throw new POP3Exception(response); } state = TRANSACTION; } catch (NoSuchAlgorithmException e) { throw new POP3Exception("Installed JRE doesn't support MD5 - APOP not possible"); } finally { mutex.release(); } } | @Override public boolean validatePublisher(Object object, String... dbSettingParams) { DBConnectionListener listener = (DBConnectionListener) object; String host = dbSettingParams[0]; String port = dbSettingParams[1]; String driver = dbSettingParams[2]; String type = dbSettingParams[3]; String dbHost = dbSettingParams[4]; String dbName = dbSettingParams[5]; String dbUser = dbSettingParams[6]; String dbPassword = dbSettingParams[7]; boolean validPublisher = false; String url = "http://" + host + ":" + port + "/reports"; try { URL _url = new URL(url); _url.openConnection().connect(); validPublisher = true; } catch (Exception e) { log.log(Level.FINE, "Failed validating url " + url, e); } if (validPublisher) { Connection conn; try { if (driver != null) { conn = DBProperties.getInstance().getConnection(driver, dbHost, dbName, type, dbUser, dbPassword); } else { conn = DBProperties.getInstance().getConnection(); } } catch (Exception e) { conn = null; listener.connectionIsOk(false, null); validPublisher = false; } if (validPublisher) { if (!allNecessaryTablesCreated(conn)) { conn = null; listener.connectionIsOk(false, null); validPublisher = false; } listener.connectionIsOk(true, conn); } } else { listener.connectionIsOk(false, null); } return validPublisher; } | 15,747 |
1 | boolean createSessionArchive(String archiveFilename) { byte[] buffer = new byte[1024]; try { ZipOutputStream archive = new ZipOutputStream(new FileOutputStream(archiveFilename)); for (mAnnotationsCursor.moveToFirst(); !mAnnotationsCursor.isAfterLast(); mAnnotationsCursor.moveToNext()) { FileInputStream in = new FileInputStream(mAnnotationsCursor.getString(ANNOTATIONS_FILE_NAME)); archive.putNextEntry(new ZipEntry("audio" + (mAnnotationsCursor.getPosition() + 1) + ".3gpp")); int length; while ((length = in.read(buffer)) > 0) archive.write(buffer, 0, length); archive.closeEntry(); in.close(); } archive.close(); } catch (IOException e) { Toast.makeText(mActivity, mActivity.getString(R.string.error_zip) + " " + e.getMessage(), Toast.LENGTH_SHORT).show(); return false; } return true; } | public static void main(String[] args) throws IOException, DataFormatException { byte in_buf[] = new byte[20000]; if (args.length < 2) { System.out.println("too few arguments"); System.exit(0); } String inputName = args[0]; InputStream in = new FileInputStream(inputName); int index = 0; for (int i = 1; i < args.length; i++) { int size = Integer.parseInt(args[i]); boolean copy = size >= 0; if (size < 0) { size = -size; } OutputStream out = null; if (copy) { index++; out = new FileOutputStream(inputName + "." + index + ".dat"); } while (size > 0) { int read = in.read(in_buf, 0, Math.min(in_buf.length, size)); if (read < 0) { break; } size -= read; if (copy) { out.write(in_buf, 0, read); } } if (copy) { out.close(); } } index++; OutputStream out = new FileOutputStream(inputName + "." + index + ".dat"); while (true) { int read = in.read(in_buf); if (read < 0) { break; } out.write(in_buf, 0, read); } out.close(); in.close(); } | 15,748 |
1 | private String save(UploadedFile imageFile) { try { File saveFld = new File(imageFolder + File.separator + userDisplay.getUser().getUsername()); if (!saveFld.exists()) { if (!saveFld.mkdir()) { logger.info("Unable to create folder: " + saveFld.getAbsolutePath()); return null; } } File tmp = File.createTempFile("img", "img"); IOUtils.copy(imageFile.getInputstream(), new FileOutputStream(tmp)); File thumbnailImage = new File(saveFld + File.separator + UUID.randomUUID().toString() + ".png"); File fullResolution = new File(saveFld + File.separator + UUID.randomUUID().toString() + ".png"); BufferedImage image = ImageIO.read(tmp); Image thumbnailIm = image.getScaledInstance(310, 210, Image.SCALE_SMOOTH); BufferedImage thumbnailBi = new BufferedImage(thumbnailIm.getWidth(null), thumbnailIm.getHeight(null), BufferedImage.TYPE_INT_RGB); Graphics bg = thumbnailBi.getGraphics(); bg.drawImage(thumbnailIm, 0, 0, null); bg.dispose(); ImageIO.write(thumbnailBi, "png", thumbnailImage); ImageIO.write(image, "png", fullResolution); if (!tmp.delete()) { logger.info("Unable to delete: " + tmp.getAbsolutePath()); } String imageId = UUID.randomUUID().toString(); imageBean.addImage(imageId, new ImageRecord(imageFile.getFileName(), fullResolution.getAbsolutePath(), thumbnailImage.getAbsolutePath(), userDisplay.getUser().getUsername())); return imageId; } catch (Throwable t) { logger.log(Level.SEVERE, "Unable to save the image.", t); return null; } } | private void writeFile(FileInputStream inFile, FileOutputStream outFile) throws IOException { byte[] buf = new byte[2048]; int read; while ((read = inFile.read(buf)) > 0) outFile.write(buf, 0, read); inFile.close(); } | 15,749 |
1 | public static void copyFile(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } } | public Object process(Atom oAtm) throws IOException { File oFile; FileReader oFileRead; String sPathHTML; char cBuffer[]; Object oReplaced; final String sSep = System.getProperty("file.separator"); if (DebugFile.trace) { DebugFile.writeln("Begin FileDumper.process([Job:" + getStringNull(DB.gu_job, "") + ", Atom:" + String.valueOf(oAtm.getInt(DB.pg_atom)) + "])"); DebugFile.incIdent(); } if (bHasReplacements) { sPathHTML = getProperty("workareasput"); if (!sPathHTML.endsWith(sSep)) sPathHTML += sSep; sPathHTML += getParameter("gu_workarea") + sSep + "apps" + sSep + "Mailwire" + sSep + "html" + sSep + getParameter("gu_pageset") + sSep; sPathHTML += getParameter("nm_pageset").replace(' ', '_') + ".html"; if (DebugFile.trace) DebugFile.writeln("PathHTML = " + sPathHTML); oReplaced = oReplacer.replace(sPathHTML, oAtm.getItemMap()); bHasReplacements = (oReplacer.lastReplacements() > 0); } else { oReplaced = null; if (null != oFileStr) oReplaced = oFileStr.get(); if (null == oReplaced) { sPathHTML = getProperty("workareasput"); if (!sPathHTML.endsWith(sSep)) sPathHTML += sSep; sPathHTML += getParameter("gu_workarea") + sSep + "apps" + sSep + "Mailwire" + sSep + "html" + sSep + getParameter("gu_pageset") + sSep + getParameter("nm_pageset").replace(' ', '_') + ".html"; if (DebugFile.trace) DebugFile.writeln("PathHTML = " + sPathHTML); oFile = new File(sPathHTML); cBuffer = new char[new Long(oFile.length()).intValue()]; oFileRead = new FileReader(oFile); oFileRead.read(cBuffer); oFileRead.close(); if (DebugFile.trace) DebugFile.writeln(String.valueOf(cBuffer.length) + " characters readed"); oReplaced = new String(cBuffer); oFileStr = new SoftReference(oReplaced); } } String sPathJobDir = getProperty("storage"); if (!sPathJobDir.endsWith(sSep)) sPathJobDir += sSep; sPathJobDir += "jobs" + sSep + getParameter("gu_workarea") + sSep + getString(DB.gu_job) + sSep; FileWriter oFileWrite = new FileWriter(sPathJobDir + getString(DB.gu_job) + "_" + String.valueOf(oAtm.getInt(DB.pg_atom)) + ".html", true); oFileWrite.write((String) oReplaced); oFileWrite.close(); iPendingAtoms--; if (DebugFile.trace) { DebugFile.writeln("End FileDumper.process([Job:" + getStringNull(DB.gu_job, "") + ", Atom:" + String.valueOf(oAtm.getInt(DB.pg_atom)) + "])"); DebugFile.decIdent(); } return oReplaced; } | 15,750 |
0 | private void copyFileToPhotoFolder(File photo, String personId) { try { FileChannel in = new FileInputStream(photo).getChannel(); File dirServer = new File(Constants.PHOTO_DIR); if (!dirServer.exists()) { dirServer.mkdirs(); } File fileServer = new File(Constants.PHOTO_DIR + personId + ".jpg"); if (!fileServer.exists()) { fileServer.createNewFile(); } in.transferTo(0, in.size(), new FileOutputStream(fileServer).getChannel()); in.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } | private void criarQuestaoMultiplaEscolha(QuestaoMultiplaEscolha q) throws SQLException { PreparedStatement stmt = null; String sql = "INSERT INTO multipla_escolha (id_questao, texto, gabarito) VALUES (?,?,?)"; try { for (Alternativa alternativa : q.getAlternativa()) { stmt = conexao.prepareStatement(sql); stmt.setInt(1, q.getIdQuestao()); stmt.setString(2, alternativa.getTexto()); stmt.setBoolean(3, alternativa.getGabarito()); stmt.executeUpdate(); conexao.commit(); } } catch (SQLException e) { conexao.rollback(); throw e; } } | 15,751 |
0 | public TempFileBinaryBody(InputStream is) throws IOException { TempPath tempPath = TempStorage.getInstance().getRootTempPath(); tempFile = tempPath.createTempFile("attachment", ".bin"); OutputStream out = tempFile.getOutputStream(); IOUtils.copy(is, out); out.close(); } | public static String deleteTag(String tag_id) { String so = OctopusErrorMessages.UNKNOWN_ERROR; if (tag_id == null || tag_id.trim().equals("")) { return OctopusErrorMessages.TAG_ID_CANT_BE_EMPTY; } DBConnection theConnection = null; try { theConnection = DBServiceManager.allocateConnection(); theConnection.setAutoCommit(false); String query = "DELETE FROM tr_translation WHERE tr_translation_trtagid=?"; PreparedStatement state = theConnection.prepareStatement(query); state.setString(1, tag_id); state.executeUpdate(); String query2 = "DELETE FROM tr_tag WHERE tr_tag_id=? "; PreparedStatement state2 = theConnection.prepareStatement(query2); state2.setString(1, tag_id); state2.executeUpdate(); theConnection.commit(); so = OctopusErrorMessages.ACTION_DONE; } catch (SQLException e) { try { theConnection.rollback(); } catch (SQLException ex) { } so = OctopusErrorMessages.ERROR_DATABASE; } finally { if (theConnection != null) { try { theConnection.setAutoCommit(true); } catch (SQLException ex) { } theConnection.release(); } } return so; } | 15,752 |
1 | public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; } | public void show(HttpServletRequest request, HttpServletResponse response, String pantalla, Atributos modelos) { URL url = getRecurso(pantalla); try { IOUtils.copy(url.openStream(), response.getOutputStream()); } catch (IOException e) { throw new RuntimeException(e); } } | 15,753 |
1 | public static boolean copyFile(final File src, final File dest, long extent, final boolean overwrite) throws FileNotFoundException, IOException { boolean result = false; if (LOGGER.isLoggable(Level.FINE)) { LOGGER.fine("Copying file " + src + " to " + dest + " extent " + extent + " exists " + dest.exists()); } if (dest.exists()) { if (overwrite) { dest.delete(); LOGGER.finer(dest.getAbsolutePath() + " removed before copy."); } else { return result; } } FileInputStream fis = null; FileOutputStream fos = null; FileChannel fcin = null; FileChannel fcout = null; try { fis = new FileInputStream(src); fos = new FileOutputStream(dest); fcin = fis.getChannel(); fcout = fos.getChannel(); if (extent < 0) { extent = fcin.size(); } long trans = fcin.transferTo(0, extent, fcout); if (trans < extent) { result = false; } result = true; } catch (IOException e) { String message = "Copying " + src.getAbsolutePath() + " to " + dest.getAbsolutePath() + " with extent " + extent + " got IOE: " + e.getMessage(); if (e.getMessage().equals("Invalid argument")) { LOGGER.severe("Failed copy, trying workaround: " + message); workaroundCopyFile(src, dest); } else { IOException newE = new IOException(message); newE.setStackTrace(e.getStackTrace()); throw newE; } } finally { if (fcin != null) { fcin.close(); } if (fcout != null) { fcout.close(); } if (fis != null) { fis.close(); } if (fos != null) { fos.close(); } } return result; } | static void linkBlocks(File from, File to, int oldLV) throws IOException { if (!from.isDirectory()) { if (from.getName().startsWith(COPY_FILE_PREFIX)) { IOUtils.copyBytes(new FileInputStream(from), new FileOutputStream(to), 16 * 1024, true); } else { if (oldLV >= PRE_GENERATIONSTAMP_LAYOUT_VERSION) { to = new File(convertMetatadataFileName(to.getAbsolutePath())); } HardLink.createHardLink(from, to); } return; } if (!to.mkdir()) throw new IOException("Cannot create directory " + to); String[] blockNames = from.list(new java.io.FilenameFilter() { public boolean accept(File dir, String name) { return name.startsWith(BLOCK_SUBDIR_PREFIX) || name.startsWith(BLOCK_FILE_PREFIX) || name.startsWith(COPY_FILE_PREFIX); } }); for (int i = 0; i < blockNames.length; i++) linkBlocks(new File(from, blockNames[i]), new File(to, blockNames[i]), oldLV); } | 15,754 |
1 | public void doGet(HttpServletRequest req, HttpServletResponse resp) throws IOException { resp.setContentType("text/html"); resp.getWriter().println("Getting feed..."); String googleFeed = "http://news.google.com/news?ned=us&topic=h&output=rss"; String totalFeed = ""; try { URL url = new URL(googleFeed); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); String line = null; while ((line = reader.readLine()) != null) { totalFeed += line; } reader.close(); parseFeedandPersist(totalFeed, resp); } catch (MalformedURLException e) { } catch (IOException e) { } } | @Override public void doFilter(ServletRequest req, ServletResponse res, FilterChain chain) throws IOException, ServletException { HttpServletRequest request = (HttpServletRequest) req; HttpServletResponse response = (HttpServletResponse) res; ImagesService imgService = ImagesServiceFactory.getImagesService(); InputStream stream = request.getInputStream(); ArrayList<Byte> bytes = new ArrayList<Byte>(); int b = 0; while ((b = stream.read()) != -1) { bytes.add((byte) b); } byte img[] = new byte[bytes.size()]; for (int i = 0; i < bytes.size(); i++) { img[i] = bytes.get(i); } BlobstoreService blobstoreService = BlobstoreServiceFactory.getBlobstoreService(); String urlBlobstore = blobstoreService.createUploadUrl("/blobstore-servlet?action=upload"); URL url = new URL("http://localhost:8888" + urlBlobstore); HttpURLConnection connection = (HttpURLConnection) url.openConnection(); connection.setDoInput(true); connection.setDoOutput(true); connection.setRequestMethod("POST"); connection.setRequestProperty("Content-Type", "multipart/form-data;boundary=29772313"); OutputStream out = connection.getOutputStream(); out.write(img); out.flush(); out.close(); System.out.println(connection.getResponseCode()); System.out.println(connection.getResponseMessage()); BufferedReader rd = new BufferedReader(new InputStreamReader(connection.getInputStream())); String responseText = ""; String line; while ((line = rd.readLine()) != null) { responseText += line; } out.close(); rd.close(); response.sendRedirect("/blobstore-servlet?action=getPhoto&" + responseText); } | 15,755 |
1 | private static void main(String[] args) { try { File f = new File("test.txt"); if (f.exists()) { throw new IOException(f + " already exists. I don't want to overwrite it."); } StraightStreamReader in; char[] cbuf = new char[0x1000]; int read; int totRead; FileOutputStream out = new FileOutputStream(f); for (int i = 0x00; i < 0x100; i++) { out.write(i); } out.close(); in = new StraightStreamReader(new FileInputStream(f)); for (int i = 0x00; i < 0x100; i++) { read = in.read(); if (read != i) { System.err.println("Error: " + i + " read as " + read); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = in.read(cbuf); if (totRead != 0x100) { System.err.println("Simple buffered read did not read the full amount: 0x" + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 7)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); f.delete(); } catch (IOException x) { System.err.println(x.getMessage()); } } | public static void copyFile(File source, File destination, long copyLength) throws IOException { if (!source.exists()) { String message = "File " + source + " does not exist"; throw new FileNotFoundException(message); } if (destination.getParentFile() != null && !destination.getParentFile().exists()) { forceMkdir(destination.getParentFile()); } if (destination.exists() && !destination.canWrite()) { String message = "Unable to open file " + destination + " for writing."; throw new IOException(message); } if (source.getCanonicalPath().equals(destination.getCanonicalPath())) { String message = "Unable to write file " + source + " on itself."; throw new IOException(message); } if (copyLength == 0) { truncateFile(destination, 0); } FileInputStream input = null; FileOutputStream output = null; try { input = new FileInputStream(source); output = new FileOutputStream(destination); long lengthLeft = copyLength; byte[] buffer = new byte[(int) Math.min(BUFFER_LENGTH, lengthLeft + 1)]; int read; while (lengthLeft > 0) { read = input.read(buffer); if (read == -1) { break; } lengthLeft -= read; output.write(buffer, 0, read); } output.flush(); output.getFD().sync(); } finally { IOUtil.closeQuietly(input); IOUtil.closeQuietly(output); } destination.setLastModified(source.lastModified()); } | 15,756 |
1 | public String getHash(String str) { try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(str.getBytes()); byte[] toChapter1Digest = md.digest(); return Keystore.hexEncode(toChapter1Digest); } catch (Exception e) { logger.error("Error in creating DN hash: " + e.getMessage()); return null; } } | public static final String enCode(String algorithm, String string) { MessageDigest md; String result = ""; try { md = MessageDigest.getInstance(algorithm); md.update(string.getBytes()); result = binaryToString(md.digest()); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } return result; } | 15,757 |
0 | public void store(Component component, String componentName, int currentPilot) { try { PreparedStatement psta = jdbc.prepareStatement("UPDATE component_prop " + "SET size_height = ?, size_width = ?, pos_x = ?, pos_y = ? " + "WHERE pilot_id = ? " + "AND component_name = ?"); psta.setInt(1, component.getHeight()); psta.setInt(2, component.getWidth()); Point point = component.getLocation(); psta.setInt(3, point.x); psta.setInt(4, point.y); psta.setInt(5, currentPilot); psta.setString(6, componentName); int update = psta.executeUpdate(); if (update == 0) { psta = jdbc.prepareStatement("INSERT INTO component_prop " + "(size_height, size_width, pos_x, pos_y, pilot_id, component_name) " + "VALUES (?,?,?,?,?,?)"); psta.setInt(1, component.getHeight()); psta.setInt(2, component.getWidth()); psta.setInt(3, point.x); psta.setInt(4, point.y); psta.setInt(5, currentPilot); psta.setString(6, componentName); psta.executeUpdate(); } jdbc.commit(); } catch (SQLException e) { jdbc.rollback(); log.debug(e); } } | public void run(IProgressMonitor runnerMonitor) throws CoreException { try { Map<String, File> projectFiles = new HashMap<String, File>(); IPath basePath = new Path("/"); for (File nextLocation : filesToZip) { projectFiles.putAll(getFilesToZip(nextLocation, basePath, fileFilter)); } if (projectFiles.isEmpty()) { PlatformActivator.logDebug("Zip file (" + zipFileName + ") not created because there were no files to zip"); return; } IPath resultsPath = PlatformActivator.getDefault().getResultsPath(); File copyRoot = resultsPath.toFile(); copyRoot.mkdirs(); IPath zipFilePath = resultsPath.append(new Path(finalZip)); String zipFileName = zipFilePath.toPortableString(); ZipOutputStream out = new ZipOutputStream(new FileOutputStream(zipFileName)); try { out.setLevel(Deflater.DEFAULT_COMPRESSION); for (String filePath : projectFiles.keySet()) { File nextFile = projectFiles.get(filePath); FileInputStream fin = new FileInputStream(nextFile); try { out.putNextEntry(new ZipEntry(filePath)); try { byte[] bin = new byte[4096]; int bread = fin.read(bin, 0, 4096); while (bread != -1) { out.write(bin, 0, bread); bread = fin.read(bin, 0, 4096); } } finally { out.closeEntry(); } } finally { fin.close(); } } } finally { out.close(); } } catch (FileNotFoundException e) { Status error = new Status(Status.ERROR, PlatformActivator.PLUGIN_ID, Status.ERROR, e.getLocalizedMessage(), e); throw new CoreException(error); } catch (IOException e) { Status error = new Status(Status.ERROR, PlatformActivator.PLUGIN_ID, Status.ERROR, e.getLocalizedMessage(), e); throw new CoreException(error); } } | 15,758 |
0 | public static void main(String[] args) { if (args.length == 0) { System.out.println("Specify name of the file, just one entry per line"); System.exit(0); } File inFile = new File(args[0]); BufferedReader myBR = null; File outFile = new File(args[0] + ".xml"); BufferedWriter myBW = null; try { myBR = new BufferedReader(new FileReader(inFile)); myBW = new BufferedWriter(new FileWriter(outFile)); } catch (Exception ex) { System.out.println("IN: " + inFile.getAbsolutePath()); System.out.println("OUT: " + outFile.getAbsolutePath()); ex.printStackTrace(); System.exit(0); } try { String readLine; while ((readLine = myBR.readLine()) != null) { myBW.write("<dbColumn name=\"" + readLine + "\" display=\"" + readLine + "\" panel=\"CENTER\" >"); myBW.write("\n"); myBW.write("<dbType name=\"text\" maxVal=\"10\" defaultVal=\"\" sizeX=\"5\"/>"); myBW.write("\n"); myBW.write("</dbColumn>"); myBW.write("\n"); } myBW.close(); myBR.close(); } catch (Exception ex) { ex.printStackTrace(); System.exit(0); } System.out.println("OUT: " + outFile.getAbsolutePath()); System.out.println("erzeugt"); } | private InputStream urlToInputStream(URL url) throws IOException { URLConnection conn = url.openConnection(); conn.setRequestProperty("User-Agent", IE); conn.setRequestProperty("Accept-Encoding", "gzip, deflate"); conn.connect(); String encoding = conn.getContentEncoding(); if ((encoding != null) && encoding.equalsIgnoreCase("gzip")) return new GZIPInputStream(conn.getInputStream()); else if ((encoding != null) && encoding.equalsIgnoreCase("deflate")) return new InflaterInputStream(conn.getInputStream(), new Inflater(true)); else return conn.getInputStream(); } | 15,759 |
1 | public static String encrypt(String txt) throws Exception { MessageDigest md = MessageDigest.getInstance("SHA"); md.update(txt.getBytes("UTF-8")); byte raw[] = md.digest(); String hash = (new BASE64Encoder()).encode(raw); return hash; } | public static String generateDigest(String password, String saltHex, String alg) { try { MessageDigest sha = MessageDigest.getInstance(alg); byte[] salt = new byte[0]; if (saltHex != null) { salt = fromHex(saltHex); } String label = null; if (alg.startsWith("SHA")) { label = (salt.length <= 0) ? "{SHA}" : "{SSHA}"; } else if (alg.startsWith("MD5")) { label = (salt.length <= 0) ? "{MD5}" : "{SMD5}"; } sha.reset(); sha.update(password.getBytes()); sha.update(salt); byte[] pwhash = sha.digest(); StringBuffer digest = new StringBuffer(label); digest.append(Base64.encode(concatenate(pwhash, salt)).toCharArray()); return digest.toString(); } catch (NoSuchAlgorithmException nsae) { throw new RuntimeException("failed to find " + "algorithm for password hashing.", nsae); } } | 15,760 |
1 | private String md5(String s) { StringBuffer hexString = null; try { MessageDigest digest = MessageDigest.getInstance("MD5"); digest.update(s.getBytes()); byte messageDigest[] = digest.digest(); hexString = new StringBuffer(); for (int i = 0; i < messageDigest.length; i++) { String hashPart = Integer.toHexString(0xFF & messageDigest[i]); if (hashPart.length() == 1) { hashPart = "0" + hashPart; } hexString.append(hashPart); } } catch (NoSuchAlgorithmException e) { Log.e(this.getClass().getSimpleName(), "MD5 algorithm not present"); } return hexString != null ? hexString.toString() : null; } | public static KUID createRandomID() { MessageDigestInput randomNumbers = new MessageDigestInput() { public void update(MessageDigest md) { byte[] random = new byte[LENGTH * 2]; GENERATOR.nextBytes(random); md.update(random); } }; MessageDigestInput properties = new MessageDigestInput() { public void update(MessageDigest md) { Properties props = System.getProperties(); try { for (Entry entry : props.entrySet()) { String key = (String) entry.getKey(); String value = (String) entry.getValue(); md.update(key.getBytes("UTF-8")); md.update(value.getBytes("UTF-8")); } } catch (UnsupportedEncodingException e) { throw new RuntimeException(e); } } }; MessageDigestInput millis = new MessageDigestInput() { public void update(MessageDigest md) { long millis = System.currentTimeMillis(); md.update((byte) ((millis >> 56L) & 0xFFL)); md.update((byte) ((millis >> 48L) & 0xFFL)); md.update((byte) ((millis >> 40L) & 0xFFL)); md.update((byte) ((millis >> 32L) & 0xFFL)); md.update((byte) ((millis >> 24L) & 0xFFL)); md.update((byte) ((millis >> 16L) & 0xFFL)); md.update((byte) ((millis >> 8L) & 0xFFL)); md.update((byte) ((millis) & 0xFFL)); } }; MessageDigestInput nanos = new MessageDigestInput() { public void update(MessageDigest md) { long nanos = System.nanoTime(); md.update((byte) ((nanos >> 56L) & 0xFFL)); md.update((byte) ((nanos >> 48L) & 0xFFL)); md.update((byte) ((nanos >> 40L) & 0xFFL)); md.update((byte) ((nanos >> 32L) & 0xFFL)); md.update((byte) ((nanos >> 24L) & 0xFFL)); md.update((byte) ((nanos >> 16L) & 0xFFL)); md.update((byte) ((nanos >> 8L) & 0xFFL)); md.update((byte) ((nanos) & 0xFFL)); } }; MessageDigestInput[] input = { properties, randomNumbers, millis, nanos }; Arrays.sort(input); try { MessageDigest md = MessageDigest.getInstance("SHA1"); for (MessageDigestInput mdi : input) { mdi.update(md); int hashCode = System.identityHashCode(mdi); md.update((byte) ((hashCode >> 24) & 0xFF)); md.update((byte) ((hashCode >> 16) & 0xFF)); md.update((byte) ((hashCode >> 8) & 0xFF)); md.update((byte) ((hashCode) & 0xFF)); md.update((byte) ((mdi.rnd >> 24) & 0xFF)); md.update((byte) ((mdi.rnd >> 16) & 0xFF)); md.update((byte) ((mdi.rnd >> 8) & 0xFF)); md.update((byte) ((mdi.rnd) & 0xFF)); } return new KUID(md.digest()); } catch (NoSuchAlgorithmException e) { throw new RuntimeException(e); } } | 15,761 |
1 | public static void doVersionCheck(View view) { view.showWaitCursor(); try { URL url = new URL(jEdit.getProperty("version-check.url")); InputStream in = url.openStream(); BufferedReader bin = new BufferedReader(new InputStreamReader(in)); String line; String develBuild = null; String stableBuild = null; while ((line = bin.readLine()) != null) { if (line.startsWith(".build")) develBuild = line.substring(6).trim(); else if (line.startsWith(".stablebuild")) stableBuild = line.substring(12).trim(); } bin.close(); if (develBuild != null && stableBuild != null) { doVersionCheck(view, stableBuild, develBuild); } } catch (IOException e) { String[] args = { jEdit.getProperty("version-check.url"), e.toString() }; GUIUtilities.error(view, "read-error", args); } view.hideWaitCursor(); } | public void readData(int choice) throws IOException { for (i = 0; i < max; i++) for (j = 0; j < max; j++) { phase_x[i][j] = 0.0; phase_y[i][j] = 0.0; } URL url; InputStream is; InputStreamReader isr; if (choice == 0) { url = getClass().getResource("resources/Phase_623_620_Achromat.dat"); is = url.openStream(); isr = new InputStreamReader(is); } else { url = getClass().getResource("resources/Phase_623_620_NoAchromat.dat"); is = url.openStream(); isr = new InputStreamReader(is); } BufferedReader br = new BufferedReader(isr); s = br.readLine(); StringTokenizer st = new StringTokenizer(s); i = 0; j = 0; phase_x[i][j] = 4 * Double.parseDouble(st.nextToken()); phase_y[i][j] = 4 * Double.parseDouble(st.nextToken()); xgridmin = phase_x[i][j]; ygridmin = phase_y[i][j]; temp_prev = phase_x[i][j]; kd[i][j] = Double.parseDouble(st.nextToken()); kfs[i][j] = Double.parseDouble(st.nextToken()); kfl[i][j] = Double.parseDouble(st.nextToken()); kdee[i][j] = Double.parseDouble(st.nextToken()); kdc[i][j] = Double.parseDouble(st.nextToken()); kfc[i][j] = Double.parseDouble(st.nextToken()); j++; int k = 0; while ((s = br.readLine()) != null) { st = new StringTokenizer(s); temp_new = 4 * Double.parseDouble(st.nextToken()); if (temp_new != temp_prev) { temp_prev = temp_new; i++; j = 0; } phase_x[i][j] = temp_new; phase_y[i][j] = 4 * Double.parseDouble(st.nextToken()); kd[i][j] = Double.parseDouble(st.nextToken()); kfs[i][j] = Double.parseDouble(st.nextToken()); kfl[i][j] = Double.parseDouble(st.nextToken()); kdee[i][j] = Double.parseDouble(st.nextToken()); kdc[i][j] = Double.parseDouble(st.nextToken()); kfc[i][j] = Double.parseDouble(st.nextToken()); imax = i; jmax = j; j++; k++; } xgridmax = phase_x[i][j - 1]; ygridmax = phase_y[i][j - 1]; } | 15,762 |
0 | public void get(final String remoteFilePath, final String remoteFileName, final String localName) { final FTPClient ftp = new FTPClient(); final FTPMessageCollector listener = new FTPMessageCollector(); try { final String localDirName = localName.substring(0, localName.lastIndexOf(File.separator)); System.out.println("ftp:"); System.out.println(" remoteDir " + remoteFilePath); System.out.println(" localDir " + localDirName); final File localDir = new File(localDirName); if (!localDir.exists()) { System.out.println(" create Dir " + localDirName); localDir.mkdir(); } ftp.setTimeout(10000); ftp.setRemoteHost(host); ftp.setMessageListener(listener); } catch (final UnknownHostException e) { showConnectError(); return; } catch (final Exception e) { e.printStackTrace(); } final TileInfoManager tileInfoMgr = TileInfoManager.getInstance(); final Job downloadJob = new Job(Messages.job_name_ftpDownload) { @Override protected IStatus run(final IProgressMonitor monitor) { try { showTileInfo(remoteFileName, -1); System.out.println(" connect " + host); ftp.connect(); showTileInfo(remoteFileName, -2); System.out.println(" login " + user + " " + password); ftp.login(user, password); System.out.println(" set passive mode"); ftp.setConnectMode(FTPConnectMode.PASV); System.out.println(" set type binary"); ftp.setType(FTPTransferType.BINARY); showTileInfo(remoteFileName, -3); System.out.println(" chdir " + remoteFilePath); ftp.chdir(remoteFilePath); ftp.setProgressMonitor(new FTPProgressMonitor() { public void bytesTransferred(final long count) { tileInfoMgr.updateSRTMTileInfo(TileEventId.SRTM_DATA_LOADING_MONITOR, remoteFileName, count); } }); showTileInfo(remoteFileName, -4); System.out.println(" get " + remoteFileName + " -> " + localName + " ..."); ftp.get(localName, remoteFileName); System.out.println(" quit"); ftp.quit(); } catch (final UnknownHostException e) { return new Status(IStatus.ERROR, TourbookPlugin.PLUGIN_ID, IStatus.ERROR, NLS.bind(Messages.error_message_cannotConnectToServer, host), e); } catch (final SocketTimeoutException e) { return new Status(IStatus.ERROR, TourbookPlugin.PLUGIN_ID, IStatus.ERROR, NLS.bind(Messages.error_message_timeoutWhenConnectingToServer, host), e); } catch (final Exception e) { e.printStackTrace(); tileInfoMgr.updateSRTMTileInfo(TileEventId.SRTM_DATA_ERROR_LOADING, remoteFileName, 0); } finally { tileInfoMgr.updateSRTMTileInfo(TileEventId.SRTM_DATA_END_LOADING, remoteFileName, 0); } return Status.OK_STATUS; } }; downloadJob.schedule(); try { downloadJob.join(); } catch (final InterruptedException e) { e.printStackTrace(); } } | public static String SHA1(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("SHA-1"); byte[] sha1hash = new byte[40]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); sha1hash = md.digest(); return convertToHex(sha1hash); } | 15,763 |
0 | public void addGames(List<Game> games) throws StadiumException, SQLException { Connection conn = ConnectionManager.getManager().getConnection(); conn.setAutoCommit(false); PreparedStatement stm = null; ResultSet rs = null; try { for (Game game : games) { stm = conn.prepareStatement(Statements.SELECT_STADIUM); stm.setString(1, game.getStadiumName()); stm.setString(2, game.getStadiumCity()); rs = stm.executeQuery(); int stadiumId = -1; while (rs.next()) { stadiumId = rs.getInt("stadiumID"); } if (stadiumId == -1) throw new StadiumException("No such stadium"); stm = conn.prepareStatement(Statements.INSERT_GAME); stm.setInt(1, stadiumId); stm.setDate(2, game.getGameDate()); stm.setTime(3, game.getGameTime()); stm.setString(4, game.getTeamA()); stm.setString(5, game.getTeamB()); stm.executeUpdate(); int gameId = getMaxId(); List<SectorPrice> sectorPrices = game.getSectorPrices(); for (SectorPrice price : sectorPrices) { stm = conn.prepareStatement(Statements.INSERT_TICKET_PRICE); stm.setInt(1, gameId); stm.setInt(2, price.getSectorId()); stm.setInt(3, price.getPrice()); stm.executeUpdate(); } } } catch (SQLException e) { conn.rollback(); throw e; } finally { rs.close(); stm.close(); } conn.commit(); conn.setAutoCommit(true); } | public static List<ServerInfo> getStartedServers() { List<ServerInfo> infos = new ArrayList<ServerInfo>(); try { StringBuilder request = new StringBuilder(); request.append(url).append("/").append(displayServlet); request.append("?ingame=1"); URL objUrl = new URL(request.toString()); URLConnection urlConnect = objUrl.openConnection(); InputStream in = urlConnect.getInputStream(); BufferedReader reader = new BufferedReader(new InputStreamReader(in)); while (reader.ready()) { String name = reader.readLine(); String ip = reader.readLine(); int port = Integer.valueOf(reader.readLine()); ServerInfo server = new ServerInfo(name, ip, port); server.nbPlayers = Integer.valueOf(reader.readLine()); infos.add(server); } in.close(); return infos; } catch (Exception e) { return infos; } } | 15,764 |
1 | public void run() { try { String s = (new StringBuilder()).append("fName=").append(URLEncoder.encode("???", "UTF-8")).append("&lName=").append(URLEncoder.encode("???", "UTF-8")).toString(); URL url = new URL("http://snoop.minecraft.net/"); HttpURLConnection httpurlconnection = (HttpURLConnection) url.openConnection(); httpurlconnection.setRequestMethod("POST"); httpurlconnection.setRequestProperty("Content-Type", "application/x-www-form-urlencoded"); httpurlconnection.setRequestProperty("Content-Length", (new StringBuilder()).append("").append(Integer.toString(s.getBytes().length)).toString()); httpurlconnection.setRequestProperty("Content-Language", "en-US"); httpurlconnection.setUseCaches(false); httpurlconnection.setDoInput(true); httpurlconnection.setDoOutput(true); DataOutputStream dataoutputstream = new DataOutputStream(httpurlconnection.getOutputStream()); dataoutputstream.writeBytes(s); dataoutputstream.flush(); dataoutputstream.close(); java.io.InputStream inputstream = httpurlconnection.getInputStream(); BufferedReader bufferedreader = new BufferedReader(new InputStreamReader(inputstream)); StringBuffer stringbuffer = new StringBuffer(); String s1; while ((s1 = bufferedreader.readLine()) != null) { stringbuffer.append(s1); stringbuffer.append('\r'); } bufferedreader.close(); } catch (Exception exception) { } } | public static BufferedReader getUserInfoStream(String name) throws IOException { BufferedReader in; try { URL url = new URL("http://www.spoj.pl/users/" + name.toLowerCase() + "/"); in = new BufferedReader(new InputStreamReader(url.openStream())); } catch (MalformedURLException e) { in = null; throw e; } return in; } | 15,765 |
1 | @Override public void run() { File file = new File(LogHandler.path); FileFilter filter = new FileFilter() { @Override public boolean accept(File file) { GregorianCalendar cal = new GregorianCalendar(); cal.setTime(new Date()); cal.add(GregorianCalendar.DAY_OF_YEAR, -1); String oldTime = LogHandler.dateFormat.format(cal.getTime()); return file.getName().toLowerCase().startsWith(oldTime); } }; File[] list = file.listFiles(filter); if (list.length > 0) { FileInputStream in; int read = 0; byte[] data = new byte[1024]; for (int i = 0; i < list.length; i++) { try { in = new FileInputStream(LogHandler.path + list[i].getName()); GZIPOutputStream out = new GZIPOutputStream(new FileOutputStream(LogHandler.path + list[i].getName() + ".temp")); while ((read = in.read(data, 0, 1024)) != -1) out.write(data, 0, read); in.close(); out.close(); new File(LogHandler.path + list[i].getName() + ".temp").renameTo(new File(LogHandler.path + list[i].getName() + ".gz")); list[i].delete(); } catch (FileNotFoundException e) { TrackingServer.incExceptionCounter(); e.printStackTrace(); } catch (IOException ioe) { } } } } | protected int doWork() { SAMFileReader reader = new SAMFileReader(IoUtil.openFileForReading(INPUT)); reader.getFileHeader().setSortOrder(SORT_ORDER); SAMFileWriter writer = new SAMFileWriterFactory().makeSAMOrBAMWriter(reader.getFileHeader(), false, OUTPUT); Iterator<SAMRecord> iterator = reader.iterator(); while (iterator.hasNext()) writer.addAlignment(iterator.next()); reader.close(); writer.close(); return 0; } | 15,766 |
1 | private long generateNativeInstallExe(File nativeInstallFile, String instTemplate, File instClassFile) throws IOException { InputStream reader = getClass().getResourceAsStream("/" + instTemplate); ByteArrayOutputStream content = new ByteArrayOutputStream(); String installClassVarStr = "000000000000"; byte[] buf = new byte[installClassVarStr.length()]; NumberFormat nf = NumberFormat.getInstance(Locale.US); nf.setGroupingUsed(false); nf.setMinimumIntegerDigits(installClassVarStr.length()); int installClassStopPos = 0; long installClassOffset = reader.available(); int position = 0; System.out.println(VAGlobals.i18n("VAArchiver_GenerateInstallExe")); reader.read(buf, 0, buf.length); position = 1; for (int n = 0; n < 3; n++) { while ((!new String(buf).equals("clname_here_")) && (!new String(buf).equals("clstart_here")) && (!new String(buf).equals("clstop_here_"))) { content.write(buf[0]); int nextb = reader.read(); position++; shiftArray(buf); buf[buf.length - 1] = (byte) nextb; } if (new String(buf).equals("clname_here_")) { VAGlobals.printDebug(" clname_here_ found at " + (position - 1)); StringBuffer clnameBuffer = new StringBuffer(64); clnameBuffer.append(instClassName_); for (int i = clnameBuffer.length() - 1; i < 64; i++) { clnameBuffer.append('.'); } byte[] clnameBytes = clnameBuffer.toString().getBytes(); for (int i = 0; i < 64; i++) { content.write(clnameBytes[i]); position++; } reader.skip(64 - buf.length); reader.read(buf, 0, buf.length); } else if (new String(buf).equals("clstart_here")) { VAGlobals.printDebug(" clstart_here found at " + (position - 1)); buf = nf.format(installClassOffset).getBytes(); for (int i = 0; i < buf.length; i++) { content.write(buf[i]); position++; } reader.read(buf, 0, buf.length); } else if (new String(buf).equals("clstop_here_")) { VAGlobals.printDebug(" clstop_here_ found at " + (position - 1)); installClassStopPos = position - 1; content.write(buf); position += 12; reader.read(buf, 0, buf.length); } } content.write(buf); buf = new byte[2048]; int read = reader.read(buf); while (read > 0) { content.write(buf, 0, read); read = reader.read(buf); } reader.close(); FileInputStream classStream = new FileInputStream(instClassFile); read = classStream.read(buf); while (read > 0) { content.write(buf, 0, read); read = classStream.read(buf); } classStream.close(); content.close(); byte[] contentBytes = content.toByteArray(); installClassVarStr = nf.format(contentBytes.length); byte[] installClassVarBytes = installClassVarStr.getBytes(); for (int i = 0; i < installClassVarBytes.length; i++) { contentBytes[installClassStopPos + i] = installClassVarBytes[i]; } FileOutputStream out = new FileOutputStream(nativeInstallFile); out.write(contentBytes); out.close(); return installClassOffset; } | public FileReader(String filePath, Configuration aConfiguration) throws IOException { file = new File(URLDecoder.decode(filePath, "UTF-8")).getCanonicalFile(); readerConf = aConfiguration; if (file.isDirectory()) { File indexFile = new File(file, "index.php"); File indexFile_1 = new File(file, "index.html"); if (indexFile.exists() && !indexFile.isDirectory()) { file = indexFile; } else if (indexFile_1.exists() && !indexFile_1.isDirectory()) { file = indexFile_1; } else { if (!readerConf.getOption("showFolders").equals("Yes")) { makeErrorPage(503, "Permision denied"); } else { FileOutputStream out = new FileOutputStream(readerConf.getOption("wwwPath") + "/temp/temp.php"); File[] files = file.listFiles(); makeHeader(200, -1, new Date(System.currentTimeMillis()).toString(), "text/html"); String title = "Index of " + file; out.write(("<html><head><title>" + title + "</title></head><body><h3>Index of " + file + "</h3><p>\n").getBytes()); for (int i = 0; i < files.length; i++) { file = files[i]; String filename = file.getName(); String description = ""; if (file.isDirectory()) { description = "<DIR>"; } out.write(("<a href=\"" + file.getPath().substring(readerConf.getOption("wwwPath").length()) + "\">" + filename + "</a> " + description + "<br>\n").getBytes()); } out.write(("</p><hr><p>yawwwserwer</p></body><html>").getBytes()); file = new File(URLDecoder.decode(readerConf.getOption("wwwPath") + "/temp/temp.php", "UTF-8")).getCanonicalFile(); } } } else if (!file.exists()) { makeErrorPage(404, "File Not Found."); } else if (getExtension() == ".exe" || getExtension().contains(".py")) { FileOutputStream out = new FileOutputStream(readerConf.getOption("wwwPath") + "/temp/temp.php"); out.write((runCommand(filePath)).getBytes()); file = new File(URLDecoder.decode(readerConf.getOption("wwwPath") + "/temp/temp.php", "UTF-8")).getCanonicalFile(); } else { System.out.println(getExtension()); makeHeader(200, file.length(), new Date(file.lastModified()).toString(), TYPES.get(getExtension()).toString()); } System.out.println(file); } | 15,767 |
0 | public void saveDraft(org.hibernate.Session hsession, Session session, String repositoryName, int ideIdint, String to, String cc, String bcc, String subject, String body, Vector attachments, boolean isHtml, String charset, InternetHeaders headers, String priority) throws MailException { try { if (charset == null) { charset = MimeUtility.javaCharset(Charset.defaultCharset().displayName()); } if ((body == null) || body.trim().equals("")) { body = " "; } Email email = null; if (isHtml) { email = new HtmlEmail(); } else { email = new MultiPartEmail(); } email.setCharset(charset); Users user = getUser(hsession, repositoryName); Identity identity = getIdentity(hsession, ideIdint, user); InternetAddress _returnPath = new InternetAddress(identity.getIdeEmail(), identity.getIdeName()); InternetAddress _from = new InternetAddress(identity.getIdeEmail(), identity.getIdeName()); InternetAddress _replyTo = new InternetAddress(identity.getIdeReplyTo(), identity.getIdeName()); InternetAddress[] _to = MessageUtilities.encodeAddresses(to, null); InternetAddress[] _cc = MessageUtilities.encodeAddresses(cc, null); InternetAddress[] _bcc = MessageUtilities.encodeAddresses(bcc, null); if (_from != null) { email.setFrom(_from.getAddress(), _from.getPersonal()); } if (_returnPath != null) { email.addHeader("Return-Path", _returnPath.getAddress()); email.addHeader("Errors-To", _returnPath.getAddress()); email.addHeader("X-Errors-To", _returnPath.getAddress()); } if (_replyTo != null) { email.addReplyTo(_replyTo.getAddress(), _replyTo.getPersonal()); } if ((_to != null) && (_to.length > 0)) { HashSet aux = new HashSet(_to.length); Collections.addAll(aux, _to); email.setTo(aux); } if ((_cc != null) && (_cc.length > 0)) { HashSet aux = new HashSet(_cc.length); Collections.addAll(aux, _cc); email.setCc(aux); } if ((_bcc != null) && (_bcc.length > 0)) { HashSet aux = new HashSet(_bcc.length); Collections.addAll(aux, _bcc); email.setBcc(aux); } email.setSubject(subject); Date now = new Date(); email.setSentDate(now); File dir = new File(System.getProperty("user.home") + File.separator + "tmp"); if (!dir.exists()) { dir.mkdir(); } if ((attachments != null) && (attachments.size() > 0)) { for (int i = 0; i < attachments.size(); i++) { ByteArrayInputStream bais = null; FileOutputStream fos = null; try { MailPartObj obj = (MailPartObj) attachments.get(i); File file = new File(dir, obj.getName()); bais = new ByteArrayInputStream(obj.getAttachent()); fos = new FileOutputStream(file); IOUtils.copy(bais, fos); EmailAttachment attachment = new EmailAttachment(); attachment.setPath(file.getPath()); attachment.setDisposition(EmailAttachment.ATTACHMENT); attachment.setDescription("File Attachment: " + file.getName()); attachment.setName(file.getName()); if (email instanceof MultiPartEmail) { ((MultiPartEmail) email).attach(attachment); } } catch (Exception ex) { } finally { IOUtils.closeQuietly(bais); IOUtils.closeQuietly(fos); } } } if (headers != null) { Header xheader; Enumeration xe = headers.getAllHeaders(); for (; xe.hasMoreElements(); ) { xheader = (Header) xe.nextElement(); if (xheader.getName().equals(RFC2822Headers.IN_REPLY_TO)) { email.addHeader(xheader.getName(), xheader.getValue()); } else if (xheader.getName().equals(RFC2822Headers.REFERENCES)) { email.addHeader(xheader.getName(), xheader.getValue()); } } } if (priority != null) { if (priority.equals("high")) { email.addHeader("Importance", priority); email.addHeader("X-priority", "1"); } else if (priority.equals("low")) { email.addHeader("Importance", priority); email.addHeader("X-priority", "5"); } } if (email instanceof HtmlEmail) { ((HtmlEmail) email).setHtmlMsg(body); } else { email.setMsg(body); } email.setMailSession(session); email.buildMimeMessage(); MimeMessage mime = email.getMimeMessage(); int size = MessageUtilities.getMessageSize(mime); if (!controlQuota(hsession, user, size)) { throw new MailException("ErrorMessages.mail.quota.exceded"); } messageable.storeDraftMessage(getId(), mime, user); } catch (MailException e) { throw e; } catch (Exception e) { throw new MailException(e); } catch (java.lang.OutOfMemoryError ex) { System.gc(); throw new MailException(ex); } catch (Throwable e) { throw new MailException(e); } finally { GeneralOperations.closeHibernateSession(hsession); } } | private void newGame() { List scenarios = getScenarioChoices(); ScenarioChoice scenarioChoice = (ScenarioChoice) JOptionPane.showInputDialog(this, "Choose a Scenario", "Choose a Scenario", JOptionPane.PLAIN_MESSAGE, null, scenarios.toArray(), scenarios.get(0)); if (scenarioChoice == null) { return; } Object obj; try { obj = scamsoft.util.Toolkit.loadClass(scenarioChoice.className, null); } catch (ClassNotFoundException e) { handleNetworkException(e); return; } catch (InstantiationException e) { handleNetworkException(e); return; } catch (InvocationTargetException e) { handleNetworkException(e); return; } catch (IllegalArgumentException e) { handleNetworkException(e); return; } catch (IllegalAccessException e) { handleNetworkException(e); return; } if (obj == null || !(obj instanceof Scenario)) { return; } Scenario scenario = (Scenario) obj; String[] variations = scenario.getVariations(); int chosenvariation = 0; if (variations.length > 1) { String[] variationsChoice = new String[variations.length + 1]; System.arraycopy(variations, 0, variationsChoice, 0, variations.length); variationsChoice[variationsChoice.length - 1] = "Cancel"; chosenvariation = JOptionPane.showOptionDialog(this, "Choose a Variation", "Choose Variation", JOptionPane.OK_CANCEL_OPTION, JOptionPane.PLAIN_MESSAGE, null, variationsChoice, variationsChoice[0]); if (chosenvariation == JOptionPane.CLOSED_OPTION || chosenvariation == variationsChoice.length - 1) { return; } } String path = scenarioChoice.filePrefix + chosenvariation + ".sav"; URL url = this.getClass().getClassLoader().getResource(path); try { loadGame(url.openStream()); } catch (IOException e) { handleNetworkException(e); } } | 15,768 |
1 | private void copyFile(File in, File out) { try { FileChannel sourceChannel = new FileInputStream(in).getChannel(); FileChannel destinationChannel = new FileOutputStream(out).getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel); sourceChannel.close(); destinationChannel.close(); } catch (IOException ex) { ex.printStackTrace(); } } | public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } } | 15,769 |
0 | private void getLines(PackageManager pm) throws PackageManagerException { final Pattern p = Pattern.compile("\\s*deb\\s+(ftp://|http://)(\\S+)\\s+((\\S+\\s*)*)(./){0,1}"); Matcher m; if (updateUrlAndFile == null) updateUrlAndFile = new ArrayList<UrlAndFile>(); BufferedReader f; String protocol; String host; String shares; String adress; try { f = new BufferedReader(new FileReader(sourcesList)); while ((protocol = f.readLine()) != null) { m = p.matcher(protocol); if (m.matches()) { protocol = m.group(1); host = m.group(2); if (m.group(3).trim().equalsIgnoreCase("./")) shares = ""; else shares = m.group(3).trim(); if (shares == null) adress = protocol + host; else { shares = shares.replace(" ", "/"); if (!host.endsWith("/") && !shares.startsWith("/")) host = host + "/"; adress = host + shares; while (adress.contains("//")) adress = adress.replace("//", "/"); adress = protocol + adress; } if (!adress.endsWith("/")) adress = adress + "/"; String changelogdir = adress; changelogdir = changelogdir.substring(changelogdir.indexOf("//") + 2); if (changelogdir.endsWith("/")) changelogdir = changelogdir.substring(0, changelogdir.lastIndexOf("/")); changelogdir = changelogdir.replace('/', '_'); changelogdir = changelogdir.replaceAll("\\.", "_"); changelogdir = changelogdir.replaceAll("-", "_"); changelogdir = changelogdir.replaceAll(":", "_COLON_"); adress = adress + "Packages.gz"; final String serverFileLocation = adress.replaceAll(":", "_COLON_"); final NameFileLocation nfl = new NameFileLocation(); try { final GZIPInputStream in = new GZIPInputStream(new ConnectToServer(pm).getInputStream(adress)); final String rename = new File(nfl.rename(serverFileLocation, listsDir)).getCanonicalPath(); final FileOutputStream out = new FileOutputStream(rename); final byte[] buf = new byte[4096]; int len; while ((len = in.read(buf)) > 0) out.write(buf, 0, len); out.close(); in.close(); final File file = new File(rename); final UrlAndFile uaf = new UrlAndFile(protocol + host, file, changelogdir); updateUrlAndFile.add(uaf); } catch (final Exception e) { final String message = "URL: " + adress + " caused exception"; if (null != pm) { logger.warn(message, e); pm.addWarning(message + "\n" + e.toString()); } else logger.warn(message, e); e.printStackTrace(); } } } f.close(); } catch (final FileNotFoundException e) { final String message = PreferenceStoreHolder.getPreferenceStoreByName("Screen").getPreferenceAsString("sourcesList.corrupt", "Entry not found sourcesList.corrupt"); if (null != pm) { logger.warn(message, e); pm.addWarning(message + "\n" + e.toString()); } else logger.warn(message, e); e.printStackTrace(); } catch (final IOException e) { final String message = PreferenceStoreHolder.getPreferenceStoreByName("Screen").getPreferenceAsString("SearchForServerFile.getLines.IOException", "Entry not found SearchForServerFile.getLines.IOException"); if (null != pm) { logger.warn(message, e); pm.addWarning(message + "\n" + e.toString()); } else logger.warn(message, e); e.printStackTrace(); } } | private String calculateMD5(String value) { String finalString; try { MessageDigest md5Alg = MessageDigest.getInstance("MD5"); md5Alg.reset(); md5Alg.update(value.getBytes()); byte messageDigest[] = md5Alg.digest(); StringBuilder hexString = new StringBuilder(256); for (int i = 0; i < messageDigest.length; i++) { String hex = Integer.toHexString(0xFF & messageDigest[i]); if (hex.length() == 1) { hexString.append('0'); } hexString.append(hex); } finalString = hexString.toString(); } catch (NoSuchAlgorithmException exc) { throw new RuntimeException("Hashing error happened:", exc); } return finalString; } | 15,770 |
1 | public static String SHA1(String text) throws NoSuchAlgorithmException { MessageDigest md = MessageDigest.getInstance("SHA-1"); md.update(text.getBytes()); byte byteData[] = md.digest(); StringBuffer sb = new StringBuffer(); for (int i = 0; i < byteData.length; i++) { sb.append(Integer.toString((byteData[i] & 0xff) + 0x100, 16).substring(1)); } StringBuffer hexString = new StringBuffer(); for (int i = 0; i < byteData.length; i++) { String hex = Integer.toHexString(0xff & byteData[i]); if (hex.length() == 1) hexString.append('0'); hexString.append(hex); } return hexString.toString(); } | public boolean check(String password) throws UnsupportedEncodingException, NoSuchAlgorithmException { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(username.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(realm.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(password.getBytes("ISO-8859-1")); byte[] ha1 = md.digest(); String hexHa1 = new String(Hex.encodeHex(ha1)); md.reset(); md.update(method.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(uri.getBytes("ISO-8859-1")); byte[] ha2 = md.digest(); String hexHa2 = new String(Hex.encodeHex(ha2)); md.reset(); md.update(hexHa1.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(nonce.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(nc.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(cnonce.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(qop.getBytes("ISO-8859-1")); md.update((byte) ':'); md.update(hexHa2.getBytes("ISO-8859-1")); byte[] digest = md.digest(); String hexDigest = new String(Hex.encodeHex(digest)); return (hexDigest.equalsIgnoreCase(response)); } | 15,771 |
0 | @Override protected void processImport() throws SudokuInvalidFormatException { importFolder(mUri.getLastPathSegment()); try { URL url = new URL(mUri.toString()); InputStreamReader isr = new InputStreamReader(url.openStream()); BufferedReader br = null; try { br = new BufferedReader(isr); String s; while ((s = br.readLine()) != null) { if (!s.equals("")) { importGame(s); } } } finally { if (br != null) br.close(); } } catch (MalformedURLException e) { throw new RuntimeException(e); } catch (IOException e) { throw new RuntimeException(e); } } | public void sortIndexes() { int i, j, count; int t; count = m_ItemIndexes.length; for (i = 1; i < count; i++) { for (j = 0; j < count - i; j++) { if (m_ItemIndexes[j] > m_ItemIndexes[j + 1]) { t = m_ItemIndexes[j]; m_ItemIndexes[j] = m_ItemIndexes[j + 1]; m_ItemIndexes[j + 1] = t; } } } } | 15,772 |
0 | public static void copyFile(String fromFilePath, String toFilePath, boolean overwrite) throws IOException { File fromFile = new File(fromFilePath); File toFile = new File(toFilePath); if (!fromFile.exists()) throw new IOException("FileCopy: " + "no such source file: " + fromFilePath); if (!fromFile.isFile()) throw new IOException("FileCopy: " + "can't copy directory: " + fromFilePath); if (!fromFile.canRead()) throw new IOException("FileCopy: " + "source file is unreadable: " + fromFilePath); if (toFile.isDirectory()) toFile = new File(toFile, fromFile.getName()); if (toFile.exists()) { if (!overwrite) { throw new IOException(toFilePath + " already exists!"); } if (!toFile.canWrite()) { throw new IOException("FileCopy: destination file is unwriteable: " + toFilePath); } String parent = toFile.getParent(); if (parent == null) { parent = System.getProperty("user.dir"); } File dir = new File(parent); if (!dir.exists()) { throw new IOException("FileCopy: destination directory doesn't exist: " + parent); } if (dir.isFile()) { throw new IOException("FileCopy: destination is not a directory: " + parent); } if (!dir.canWrite()) { throw new IOException("FileCopy: destination directory is unwriteable: " + parent); } } FileInputStream from = null; FileOutputStream to = null; try { from = new FileInputStream(fromFile); to = new FileOutputStream(toFile); byte[] buffer = new byte[4096]; int bytesRead; while ((bytesRead = from.read(buffer)) != -1) to.write(buffer, 0, bytesRead); } finally { long lastModified = fromFile.lastModified(); toFile.setLastModified(lastModified); if (from != null) { try { from.close(); } catch (IOException e) { } } if (to != null) { try { to.close(); } catch (IOException e) { } } } } | public static byte[] downloadFromUrl(String fileUrl) throws IOException { URL url = new URL(fileUrl); URLConnection ucon = url.openConnection(); InputStream is = ucon.getInputStream(); BufferedInputStream bis = new BufferedInputStream(is); ByteArrayBuffer baf = new ByteArrayBuffer(50); int current = 0; while ((current = bis.read()) != -1) { baf.append((byte) current); } return baf.toByteArray(); } | 15,773 |
1 | public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } } | public void readPersistentProperties() { try { String file = System.getProperty("user.home") + System.getProperty("file.separator") + ".das2rc"; File f = new File(file); if (f.canRead()) { try { InputStream in = new FileInputStream(f); load(in); in.close(); } catch (IOException e) { e.printStackTrace(); org.das2.util.DasExceptionHandler.handle(e); } } else { if (!f.exists() && f.canWrite()) { try { OutputStream out = new FileOutputStream(f); store(out, ""); out.close(); } catch (IOException e) { e.printStackTrace(); org.das2.util.DasExceptionHandler.handle(e); } } else { System.err.println("Unable to read or write " + file + ". Using defaults."); } } } catch (SecurityException ex) { ex.printStackTrace(); } } | 15,774 |
0 | public static String loadUrlContentAsString(URL url) throws IOException { char[] buf = new char[2048]; StringBuffer ret = new StringBuffer(); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); for (int chars = reader.read(buf); chars != -1; chars = reader.read(buf)) { ret.append(buf, 0, chars); } reader.close(); return ret.toString(); } | protected void doPost(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException { response.setContentType("application/jar"); byte[] bufor = new byte[BUF_LEN]; ServletContext context = getServletContext(); URL url = context.getResource(FILE_NAME); InputStream in = url.openStream(); OutputStream out = response.getOutputStream(); while (in.read(bufor) != -1) out.write(bufor); in.close(); out.close(); } | 15,775 |
1 | public void render(final HttpServletRequest request, final HttpServletResponse response, final byte[] bytes, final Throwable t, final String contentType, final String encoding) throws Exception { if (contentType != null) { response.setContentType(contentType); } if (encoding != null) { response.setCharacterEncoding(encoding); } response.setContentLength(bytes.length); IOUtils.copy(new ByteArrayInputStream(bytes), response.getOutputStream()); } | public static void copyFromHDFSMerge(String hdfsDir, String local) throws IOException { rmr(local); File f = new File(local); f.getAbsoluteFile().getParentFile().mkdirs(); HDFSDirInputStream inp = new HDFSDirInputStream(hdfsDir); FileOutputStream oup = new FileOutputStream(local); IOUtils.copyBytes(inp, oup, 65 * 1024 * 1024, true); } | 15,776 |
0 | public static void doVersionCheck(View view) { view.showWaitCursor(); try { URL url = new URL(jEdit.getProperty("version-check.url")); InputStream in = url.openStream(); BufferedReader bin = new BufferedReader(new InputStreamReader(in)); String line; String develBuild = null; String stableBuild = null; while ((line = bin.readLine()) != null) { if (line.startsWith(".build")) develBuild = line.substring(6).trim(); else if (line.startsWith(".stablebuild")) stableBuild = line.substring(12).trim(); } bin.close(); if (develBuild != null && stableBuild != null) { doVersionCheck(view, stableBuild, develBuild); } } catch (IOException e) { String[] args = { jEdit.getProperty("version-check.url"), e.toString() }; GUIUtilities.error(view, "read-error", args); } view.hideWaitCursor(); } | public void bubbleSort(int[] arr) { boolean swapped = true; int j = 0; int tmp; while (swapped) { swapped = false; j++; for (int i = 0; i < arr.length - j; i++) { if (arr[i] > arr[i + 1]) { tmp = arr[i]; arr[i] = arr[i + 1]; arr[i + 1] = tmp; swapped = true; } } } } | 15,777 |
1 | public static void copyFile3(File srcFile, File destFile) throws IOException { InputStream in = new FileInputStream(srcFile); OutputStream out = new FileOutputStream(destFile); byte[] buf = new byte[1024]; int len; while((len = in.read(buf)) > 0) { out.write(buf, 0, len); } in.close(); out.close(); } | public static void fileCopy(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } } | 15,778 |
0 | private void getRandomGUID(boolean secure) { MessageDigest md5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(128); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { } try { long time = System.currentTimeMillis(); long rand = 0; if (secure) { rand = mySecureRand.nextLong(); } else { rand = myRand.nextLong(); } sbValueBeforeMD5.append(s_id); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte[] array = md5.digest(); StringBuffer sb = new StringBuffer(32); for (int j = 0; j < array.length; ++j) { int b = array[j] & TWO_BYTES; if (b < PAD_BELOW) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { } } | public void unpack(File destDirectory, boolean delete) { if (delete) delete(destDirectory); if (destDirectory.exists()) throw new ContentPackageException("Destination directory already exists."); this.destDirectory = destDirectory; this.manifestFile = new File(destDirectory, MANIFEST_FILE_NAME); try { if (zipInputStream == null) zipInputStream = new ZipInputStream(new FileInputStream(zipFile)); ZipEntry zipEntry; while ((zipEntry = zipInputStream.getNextEntry()) != null) { File destFile = new File(destDirectory, zipEntry.getName()); destFile.getParentFile().mkdirs(); if (!zipEntry.isDirectory()) { BufferedOutputStream output = new BufferedOutputStream(new FileOutputStream(destFile), BUFFER_SIZE); byte[] buffer = new byte[BUFFER_SIZE]; int length; while ((length = zipInputStream.read(buffer, 0, BUFFER_SIZE)) != -1) output.write(buffer, 0, length); output.close(); zipInputStream.closeEntry(); } } zipInputStream.close(); } catch (IOException ex) { throw new ContentPackageException(ex); } } | 15,779 |
1 | private String getStoreName() { try { final MessageDigest digest = MessageDigest.getInstance("MD5"); digest.update(protectionDomain.getBytes()); final byte[] bs = digest.digest(); final StringBuffer sb = new StringBuffer(bs.length * 2); for (int i = 0; i < bs.length; i++) { final String s = Integer.toHexString(bs[i] & 0xff); if (s.length() < 2) sb.append('0'); sb.append(s); } return sb.toString(); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException("Can't save credentials: digest method MD5 unavailable."); } } | public static String encrypt(String txt) throws Exception { MessageDigest md = MessageDigest.getInstance("SHA"); md.update(txt.getBytes("UTF-8")); byte raw[] = md.digest(); String hash = (new BASE64Encoder()).encode(raw); return hash; } | 15,780 |
1 | public static String encrypt(String plaintext) throws NoSuchAlgorithmException { MessageDigest md; try { md = MessageDigest.getInstance("SHA"); } catch (NoSuchAlgorithmException e) { logger.error("unable to encrypt password" + e.getMessage()); throw new NoSuchAlgorithmException(e.getMessage()); } try { md.update(plaintext.getBytes("UTF-8")); } catch (UnsupportedEncodingException e) { logger.error("unable to encrypt password" + e.getMessage()); throw new NoSuchAlgorithmException(e.getMessage()); } byte raw[] = md.digest(); return (new BASE64Encoder()).encode(raw); } | private String md5(String... args) throws FlickrException { try { StringBuilder sb = new StringBuilder(); for (String str : args) { sb.append(str); } MessageDigest md = MessageDigest.getInstance("MD5"); md.update(sb.toString().getBytes()); byte[] bytes = md.digest(); StringBuilder result = new StringBuilder(); for (byte b : bytes) { String hx = Integer.toHexString(0xFF & b); if (hx.length() == 1) { hx = "0" + hx; } result.append(hx); } return result.toString(); } catch (Exception ex) { throw new FlickrException(ex); } } | 15,781 |
1 | public synchronized String encrypt(String plaintext) throws Exception { MessageDigest md = null; try { md = MessageDigest.getInstance("SHA"); } catch (NoSuchAlgorithmException e) { throw new Exception(e.getMessage()); } try { md.update(plaintext.getBytes("UTF-8")); } catch (UnsupportedEncodingException e) { throw new Exception(e.getMessage()); } byte raw[] = md.digest(); String hash = (new BASE64Encoder()).encode(raw); return hash; } | public String encryptToMD5(String info) { byte[] digesta = null; try { MessageDigest alga = MessageDigest.getInstance("MD5"); alga.update(info.getBytes()); digesta = alga.digest(); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } String rs = byte2hex(digesta); return rs; } | 15,782 |
0 | public HttpResponse executeHttp(final HttpUriRequest request, final int expectedCode) throws ClientProtocolException, IOException, HttpException { final HttpResponse response = httpClient.execute(request); if (response.getStatusLine().getStatusCode() != expectedCode) { throw newHttpException(request, response); } return response; } | private void copyFile(File sourcefile, File targetfile) { BufferedInputStream in = null; BufferedOutputStream out = null; try { in = new BufferedInputStream(new FileInputStream(sourcefile)); out = new BufferedOutputStream(new FileOutputStream(targetfile)); byte[] buffer = new byte[4096]; int bytesread = 0; while ((bytesread = in.read(buffer)) >= 0) { out.write(buffer, 0, bytesread); } } catch (IOException e) { e.printStackTrace(); } finally { try { if (in != null) { in.close(); } if (out != null) { out.close(); } } catch (IOException e) { e.printStackTrace(); } } } | 15,783 |
1 | private void convertFile() { final File fileToConvert = filePanel.getInputFile(); final File convertedFile = filePanel.getOutputFile(); if (fileToConvert == null || convertedFile == null) { Main.showMessage("Select valid files for both input and output"); return; } if (fileToConvert.getName().equals(convertedFile.getName())) { Main.showMessage("Input and Output files are same.. select different files"); return; } final int len = (int) fileToConvert.length(); progressBar.setMinimum(0); progressBar.setMaximum(len); progressBar.setValue(0); try { fileCopy(fileToConvert, fileToConvert.getAbsolutePath() + ".bakup"); } catch (IOException e) { Main.showMessage("Unable to Backup input file"); return; } final BufferedReader bufferedReader; try { bufferedReader = new BufferedReader(new FileReader(fileToConvert)); } catch (FileNotFoundException e) { Main.showMessage("Unable to create reader - file not found"); return; } final BufferedWriter bufferedWriter; try { bufferedWriter = new BufferedWriter(new FileWriter(convertedFile)); } catch (IOException e) { Main.showMessage("Unable to create writer for output file"); return; } String input; try { while ((input = bufferedReader.readLine()) != null) { if (stopRequested) { break; } bufferedWriter.write(parseLine(input)); bufferedWriter.newLine(); progressBar.setValue(progressBar.getValue() + input.length()); } } catch (IOException e) { Main.showMessage("Unable to convert " + e.getMessage()); return; } finally { try { bufferedReader.close(); bufferedWriter.close(); } catch (IOException e) { Main.showMessage("Unable to close reader/writer " + e.getMessage()); return; } } if (!stopRequested) { filePanel.readOutputFile(); progressBar.setValue(progressBar.getMaximum()); Main.setStatus("Transliterate Done."); } progressBar.setValue(progressBar.getMinimum()); } | private void copyFile(File source, File target) throws IOException { FileChannel srcChannel = new FileInputStream(source).getChannel(); FileChannel dstChannel = new FileOutputStream(target).getChannel(); dstChannel.transferFrom(srcChannel, 0, srcChannel.size()); srcChannel.close(); dstChannel.close(); } | 15,784 |
1 | public static String digest(String str) { StringBuffer sb = new StringBuffer(); try { MessageDigest md5 = MessageDigest.getInstance("md5"); md5.update(str.getBytes("ISO8859-1")); byte[] array = md5.digest(); for (int x = 0; x < 16; x++) { if ((array[x] & 0xff) < 0x10) sb.append("0"); sb.append(Long.toString(array[x] & 0xff, 16)); } } catch (Exception e) { System.out.println(e); } return sb.toString(); } | public static String generateGuid(boolean secure) { MessageDigest md5 = null; String valueBeforeMD5 = null; String valueAfterMD5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { log.error("Error: " + e); } try { long time = System.currentTimeMillis(); long rand = 0L; if (secure) rand = mySecureRand.nextLong(); else rand = myRand.nextLong(); sbValueBeforeMD5.append(s_id); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte array[] = md5.digest(); StringBuffer sb = new StringBuffer(); for (int j = 0; j < array.length; j++) { int b = array[j] & 0xff; if (b < 16) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { log.error("Error:" + e); } String raw = valueAfterMD5.toUpperCase(); StringBuffer sb = new StringBuffer(); sb.append(raw.substring(0, 8)); sb.append("-"); sb.append(raw.substring(8, 12)); sb.append("-"); sb.append(raw.substring(12, 16)); sb.append("-"); sb.append(raw.substring(16, 20)); sb.append("-"); sb.append(raw.substring(20)); return sb.toString(); } | 15,785 |
1 | public String encryptStringWithKey(String to_be_encrypted, String aKey) { String encrypted_value = ""; char xdigit[] = { '0', '1', '2', '3', '4', '5', '6', '7', '8', '9', 'A', 'B', 'C', 'D', 'E', 'F' }; MessageDigest messageDigest; try { messageDigest = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException exc) { globalErrorDictionary.takeValueForKey(("Security package does not contain appropriate algorithm"), ("Security package does not contain appropriate algorithm")); log.error("Security package does not contain appropriate algorithm"); return encrypted_value; } if (to_be_encrypted != null) { byte digest[]; byte fudge_constant[]; try { fudge_constant = ("X#@!").getBytes("UTF8"); } catch (UnsupportedEncodingException uee) { fudge_constant = ("X#@!").getBytes(); } byte fudgetoo_part[] = { (byte) xdigit[(int) (MSiteConfig.myrand() % 16)], (byte) xdigit[(int) (MSiteConfig.myrand() % 16)], (byte) xdigit[(int) (MSiteConfig.myrand() % 16)], (byte) xdigit[(int) (MSiteConfig.myrand() % 16)] }; int i = 0; if (aKey != null) { try { fudgetoo_part = aKey.getBytes("UTF8"); } catch (UnsupportedEncodingException uee) { fudgetoo_part = aKey.getBytes(); } } messageDigest.update(fudge_constant); try { messageDigest.update(to_be_encrypted.getBytes("UTF8")); } catch (UnsupportedEncodingException uee) { messageDigest.update(to_be_encrypted.getBytes()); } messageDigest.update(fudgetoo_part); digest = messageDigest.digest(); encrypted_value = new String(fudgetoo_part); for (i = 0; i < digest.length; i++) { int mashed; char temp[] = new char[2]; if (digest[i] < 0) { mashed = 127 + (-1 * digest[i]); } else { mashed = digest[i]; } temp[0] = xdigit[mashed / 16]; temp[1] = xdigit[mashed % 16]; encrypted_value = encrypted_value + (new String(temp)); } } return encrypted_value; } | public static String GetMD5SUM(String s) throws NoSuchAlgorithmException { MessageDigest algorithm = MessageDigest.getInstance("MD5"); algorithm.reset(); algorithm.update(s.getBytes()); byte messageDigest[] = algorithm.digest(); String md5sum = Base64.encode(messageDigest); return md5sum; } | 15,786 |
0 | private static TreeViewTreeNode newInstance(String className, String urlString) { try { URL url = new URL(urlString); InputStream is = url.openStream(); XMLDecoder xd = new XMLDecoder(is); Object userObject = xd.readObject(); xd.close(); return newInstance(className, userObject); } catch (Exception e) { Debug.println(e); throw (RuntimeException) new IllegalStateException().initCause(e); } } | public static String encrypt(String algorithm, String[] input) { try { MessageDigest md = MessageDigest.getInstance(algorithm); md.reset(); for (int i = 0; i < input.length; i++) { if (input[i] != null) md.update(input[i].getBytes("UTF-8")); } byte[] messageDigest = md.digest(); StringBuffer hexString = new StringBuffer(); for (int i = 0; i < messageDigest.length; i++) { hexString.append(Integer.toHexString((0xf0 & messageDigest[i]) >> 4)); hexString.append(Integer.toHexString(0x0f & messageDigest[i])); } return hexString.toString(); } catch (NoSuchAlgorithmException e) { throw new RuntimeException(e); } catch (UnsupportedEncodingException e) { throw new RuntimeException(e); } catch (NullPointerException e) { return new StringBuffer().toString(); } } | 15,787 |
1 | protected void saveSelectedFiles() { if (dataList.getSelectedRowCount() == 0) { return; } if (dataList.getSelectedRowCount() == 1) { Object obj = model.getItemAtRow(sorter.convertRowIndexToModel(dataList.getSelectedRow())); AttachFile entry = (AttachFile) obj; JFileChooser fc = new JFileChooser(); fc.setSelectedFile(new File(fc.getCurrentDirectory(), entry.getCurrentPath().getName())); if (fc.showSaveDialog(this) == JFileChooser.APPROVE_OPTION) { File current = entry.getCurrentPath(); File dest = fc.getSelectedFile(); try { FileInputStream in = new FileInputStream(current); FileOutputStream out = new FileOutputStream(dest); byte[] readBuf = new byte[1024 * 512]; int readLength; while ((readLength = in.read(readBuf)) != -1) { out.write(readBuf, 0, readLength); } in.close(); out.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } return; } else { JFileChooser fc = new JFileChooser(); fc.setFileSelectionMode(JFileChooser.DIRECTORIES_ONLY); if (fc.showSaveDialog(this) == JFileChooser.APPROVE_OPTION) { for (Integer idx : dataList.getSelectedRows()) { Object obj = model.getItemAtRow(sorter.convertRowIndexToModel(idx)); AttachFile entry = (AttachFile) obj; File current = entry.getCurrentPath(); File dest = new File(fc.getSelectedFile(), entry.getName()); try { FileInputStream in = new FileInputStream(current); FileOutputStream out = new FileOutputStream(dest); byte[] readBuf = new byte[1024 * 512]; int readLength; while ((readLength = in.read(readBuf)) != -1) { out.write(readBuf, 0, readLength); } in.close(); out.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } } return; } } | private static void setEnvEntry(File fromEAR, File toEAR, String ejbJarName, String envEntryName, String envEntryValue) throws Exception { ZipInputStream earFile = new ZipInputStream(new FileInputStream(fromEAR)); FileOutputStream fos = new FileOutputStream(toEAR); ZipOutputStream tempZip = new ZipOutputStream(fos); ZipEntry next = earFile.getNextEntry(); while (next != null) { ByteArrayOutputStream content = new ByteArrayOutputStream(); byte[] data = new byte[30000]; int numberread; while ((numberread = earFile.read(data)) != -1) { content.write(data, 0, numberread); } if (next.getName().equals(ejbJarName)) { content = editEJBJAR(next, content, envEntryName, envEntryValue); next = new ZipEntry(ejbJarName); } tempZip.putNextEntry(next); tempZip.write(content.toByteArray()); next = earFile.getNextEntry(); } earFile.close(); tempZip.close(); fos.close(); } | 15,788 |
0 | public static void transfer(FileInputStream fileInStream, FileOutputStream fileOutStream) throws IOException { FileChannel fileInChannel = fileInStream.getChannel(); FileChannel fileOutChannel = fileOutStream.getChannel(); long fileInSize = fileInChannel.size(); try { long transferred = fileInChannel.transferTo(0, fileInSize, fileOutChannel); if (transferred != fileInSize) { throw new IOException("transfer() did not complete"); } } finally { ensureClose(fileInChannel, fileOutChannel); } } | public void assign() throws Exception { if (proposalIds.equals("") || usrIds.equals("")) throw new Exception("No proposal or peer-viewer selected."); String[] pids = proposalIds.split(","); String[] uids = usrIds.split(","); int pnum = pids.length; int unum = uids.length; if (pnum == 0 || unum == 0) throw new Exception("No proposal or peer-viewer selected."); int i, j; String pStr = "update proposal set current_status='assigned' where "; for (i = 0; i < pnum; i++) { if (i > 0) pStr += " OR "; pStr += "PROPOSAL_ID=" + pids[i]; } Calendar date = Calendar.getInstance(); int day = date.get(Calendar.DATE); int month = date.get(Calendar.MONTH); int year = date.get(Calendar.YEAR); String dt = String.valueOf(year) + "-" + String.valueOf(month + 1) + "-" + String.valueOf(day); PreparedStatement prepStmt = null; try { con = database.getConnection(); con.setAutoCommit(false); prepStmt = con.prepareStatement(pStr); prepStmt.executeUpdate(); pStr = "insert into event (summary,document1,document2,document3,publicComments,privateComments,ACTION_ID,eventDate,ROLE_ID,reviewText,USR_ID,PROPOSAL_ID,SUBJECTUSR_ID) values " + "('','','','','','','assigned','" + dt + "',2,'new'," + userId + ",?,?)"; prepStmt = con.prepareStatement(pStr); for (i = 0; i < pnum; i++) { for (j = 0; j < unum; j++) { prepStmt.setString(1, pids[i]); prepStmt.setString(2, uids[j]); prepStmt.executeUpdate(); } } con.commit(); } catch (Exception e) { if (!con.isClosed()) { con.rollback(); prepStmt.close(); con.close(); } throw e; } event_Form fr = new event_Form(); for (j = 0; j < unum; j++) { fr.setUSR_ID(userId); fr.setSUBJECTUSR_ID(uids[j]); systemManager.handleEvent(SystemManager.EVENT_PROPOSAL_ASSIGNED, fr, null, null); } } | 15,789 |
0 | public static void main(String args[]) { try { URL url = new URL("http://dev.activeanalytics.ca/piwik.php?url=http%3a%2f%2flyricscatcher.sourceforge.net%2fpiwik.php&action_name=&idsite=1&res=1440x900&h=17&m=2&s=16&fla=1&dir=1&qt=1&realp=1&pdf=1&wma=1&java=1&cookie=0&title=JAVAACCESS&urlref=http%3a%2f%2flyricscatcher.sourceforge.net%2fcomputeraccespage.html"); InputStream ist = url.openStream(); InputStreamReader isr = new InputStreamReader(ist); BufferedReader in = new BufferedReader(isr); String line = ""; String inputline = ""; while ((inputline = in.readLine()) != null) { line += inputline + "\n"; } System.out.println("finished: length=" + line.length() + "line=" + line); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } try { URL url = new URL("http://apps.sourceforge.net/piwik/lyricscatcher/piwik.php?url=http%3a%2f%2flyricscatcher.sourceforge.net%2fpiwik.php&action_name=&idsite=1&res=1440x900&h=0&m=22&s=1&fla=1&dir=1&qt=1&realp=1&pdf=1&wma=1&java=1&cookie=0&title=JAVAACCESS&urlref=http%3a%2f%2flyricscatcher.sourceforge.net%2fcomputeraccespage.html"); InputStream ist = url.openStream(); InputStreamReader isr = new InputStreamReader(ist); BufferedReader in = new BufferedReader(isr); String line = ""; String inputline = ""; while ((inputline = in.readLine()) != null) { line += inputline + "\n"; } System.out.println("finished: length=" + line.length() + "line=" + line); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } try { URL url = new URL("http://apps.sourceforge.net/piwik/lyricscatcher/piwik.php?url=http%3A%2F%2Flyricscatcher.sourceforge.net%2Fcomputeracces.html&action_name=&idsite=1&res=1440x900&h=0&m=28&s=36&fla=1&dir=1&qt=1&realp=0&pdf=1&wma=1&java=1&cookie=1&title=&urlref="); InputStream ist = url.openStream(); InputStreamReader isr = new InputStreamReader(ist); BufferedReader in = new BufferedReader(isr); String line = ""; String inputline = ""; while ((inputline = in.readLine()) != null) { line += inputline + "\n"; } System.out.println("finished: length=" + line.length() + "line=" + line); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } | public static void writeDataResourceText(GenericValue dataResource, String mimeTypeId, Locale locale, Map templateContext, CmsOFBizRemoteClient remoteClient, Writer out, boolean cache) throws IOException, GeneralException { Map context = (Map) templateContext.get("context"); if (context == null) { context = FastMap.newInstance(); } String webSiteId = (String) templateContext.get("webSiteId"); if (UtilValidate.isEmpty(webSiteId)) { if (context != null) webSiteId = (String) context.get("webSiteId"); } String https = (String) templateContext.get("https"); if (UtilValidate.isEmpty(https)) { if (context != null) https = (String) context.get("https"); } Map fields = dataResource.getAllFields(); String dataResourceId = (String) fields.get("dataResourceId"); String dataResourceTypeId = (String) fields.get("dataResourceTypeId"); if (UtilValidate.isEmpty(dataResourceTypeId)) { dataResourceTypeId = "SHORT_TEXT"; } if ("SHORT_TEXT".equals(dataResourceTypeId) || "LINK".equals(dataResourceTypeId)) { String text = (String) fields.get("objectInfo"); writeText(remoteClient, dataResource, text, templateContext, mimeTypeId, locale, out); } else if ("ELECTRONIC_TEXT".equals(dataResourceTypeId)) { GenericValue electronicText; if (cache) { electronicText = remoteClient.findByPrimaryKeyCache("ElectronicText", UtilMisc.toMap("dataResourceId", dataResourceId)); } else { electronicText = remoteClient.findByPrimaryKey("ElectronicText", UtilMisc.toMap("dataResourceId", dataResourceId)); } fields = electronicText.getAllFields(); String text = (String) fields.get("textData"); writeText(remoteClient, dataResource, text, templateContext, mimeTypeId, locale, out); } else if (dataResourceTypeId.endsWith("_OBJECT")) { String text = (String) fields.get("dataResourceId"); writeText(remoteClient, dataResource, text, templateContext, mimeTypeId, locale, out); } else if (dataResourceTypeId.equals("URL_RESOURCE")) { String text = null; URL url = new URL((String) fields.get("objectInfo")); if (url.getHost() != null) { InputStream in = url.openStream(); int c; StringWriter sw = new StringWriter(); while ((c = in.read()) != -1) { sw.write(c); } sw.close(); text = sw.toString(); } else { String prefix = DataResourceWorker.buildRequestPrefix(remoteClient, locale, webSiteId, https); String sep = ""; if (url.toString().indexOf("/") != 0 && prefix.lastIndexOf("/") != (prefix.length() - 1)) { sep = "/"; } String fixedUrlStr = prefix + sep + url.toString(); URL fixedUrl = new URL(fixedUrlStr); text = (String) fixedUrl.getContent(); } out.write(text); } else if (dataResourceTypeId.endsWith("_FILE_BIN")) { writeText(remoteClient, dataResource, dataResourceId, templateContext, mimeTypeId, locale, out); } else if (dataResourceTypeId.endsWith("_FILE")) { String dataResourceMimeTypeId = (String) fields.get("mimeTypeId"); String objectInfo = (String) fields.get("objectInfo"); String rootDir = (String) context.get("rootDir"); if (dataResourceMimeTypeId == null || dataResourceMimeTypeId.startsWith("text")) { renderFile(dataResourceTypeId, objectInfo, rootDir, out); } else { writeText(remoteClient, dataResource, dataResourceId, templateContext, mimeTypeId, locale, out); } } else { throw new GeneralException("The dataResourceTypeId [" + dataResourceTypeId + "] is not supported in renderDataResourceAsText"); } } | 15,790 |
0 | public static String getFileContents(String path) { BufferedReader buffReader = null; if (path.indexOf("://") != -1) { URL url = null; try { url = new URL(path); } catch (MalformedURLException e) { logger.warn("Malformed URL: \"" + path + "\""); } try { String encoding = XMLKit.getDeclaredXMLEncoding(url.openStream()); buffReader = new BufferedReader(new InputStreamReader(url.openStream(), encoding)); } catch (IOException e) { logger.warn("I/O error trying to read \"" + path + "\""); } } else { File toRead = null; try { toRead = getExistingFile(path); } catch (FileNotFoundException e) { throw new UserError(new FileNotFoundException(path)); } if (toRead.isAbsolute()) { String parent = toRead.getParent(); try { workingDirectory.push(URLTools.createValidURL(parent)); } catch (FileNotFoundException e) { throw new DeveloperError("Created an invalid parent file: \"" + parent + "\".", e); } } if (toRead.exists() && !toRead.isDirectory()) { path = toRead.getAbsolutePath(); try { String encoding = XMLKit.getDeclaredXMLEncoding(new FileInputStream(path)); buffReader = new BufferedReader(new InputStreamReader(new FileInputStream(path), encoding)); } catch (IOException e) { logger.warn("I/O error trying to read \"" + path + "\""); return null; } } else { assert toRead.exists() : "getExistingFile() returned a non-existent file"; if (toRead.isDirectory()) { throw new UserError(new FileAlreadyExistsAsDirectoryException(toRead)); } } } StringBuilder result = new StringBuilder(); String line; try { while ((line = buffReader.readLine()) != null) { result.append(line); } buffReader.close(); } catch (IOException e) { logger.warn("I/O error trying to read \"" + path + "\""); return null; } return result.toString(); } | public static String getUrl(String urlString) { int retries = 0; String result = ""; while (true) { try { URL url = new URL(urlString); BufferedReader rdr = new BufferedReader(new InputStreamReader(url.openStream())); String line = rdr.readLine(); while (line != null) { result += line; line = rdr.readLine(); } return result; } catch (IOException ex) { if (retries == 5) { logger.debug("Problem getting url content exhausted"); return result; } else { logger.debug("Problem getting url content retrying..." + urlString); try { Thread.sleep((int) Math.pow(2.0, retries) * 1000); } catch (InterruptedException e) { } retries++; } } } } | 15,791 |
0 | private void downloadFtp(File file, URL jurl) throws SocketException, IOException { System.out.println("downloadFtp(" + file + ", " + jurl + ")"); FTPClient client = new FTPClient(); client.addProtocolCommandListener(new ProtocolCommandListener() { public void protocolCommandSent(ProtocolCommandEvent event) { System.out.println("downloadFtp: " + event.getMessage()); } public void protocolReplyReceived(ProtocolCommandEvent event) { System.out.println("downloadFtp: " + event.getMessage()); } }); try { client.connect(jurl.getHost(), -1 == jurl.getPort() ? FTP.DEFAULT_PORT : jurl.getPort()); int reply = client.getReplyCode(); if (!FTPReply.isPositiveCompletion(reply)) { client.disconnect(); throw new IOException("FTP server refused connection."); } if (!client.login("anonymous", "anonymous")) { client.logout(); throw new IOException("Authentication failure."); } client.setFileType(FTP.BINARY_FILE_TYPE); client.enterLocalPassiveMode(); FileOutputStream out = new FileOutputStream(file); boolean ok = client.retrieveFile(jurl.getPath(), out); out.close(); client.logout(); if (!ok) { throw new IOException("File transfer failure."); } } catch (IOException e) { throw e; } finally { if (client.isConnected()) { try { client.disconnect(); } catch (IOException e) { } } } } | protected static URL[] createUrls(URL jarUrls[]) { ArrayList<URL> additionalUrls = new ArrayList<URL>(Arrays.asList(jarUrls)); for (URL ju : jarUrls) { try { JarFile jar = new JarFile(ju.getFile()); Enumeration<JarEntry> entries = jar.entries(); while (entries.hasMoreElements()) { JarEntry j = entries.nextElement(); if (j.isDirectory()) continue; if (j.getName().startsWith("lib/") && j.getName().endsWith(".jar")) { URL url = new URL("jar:" + ju.getProtocol() + ":" + ju.getFile() + "!/" + j.getName()); InputStream is = url.openStream(); File tmpFile = File.createTempFile("SCDeploy", ".jar"); FileOutputStream fos = new FileOutputStream(tmpFile); IOUtils.copy(is, fos); is.close(); fos.close(); additionalUrls.add(new URL("file://" + tmpFile.getAbsolutePath())); } } } catch (IOException e) { } } return additionalUrls.toArray(new URL[] {}); } | 15,792 |
1 | private void loadMap() { final String wordList = "vietwordlist.txt"; try { File dataFile = new File(supportDir, wordList); if (!dataFile.exists()) { final ReadableByteChannel input = Channels.newChannel(ClassLoader.getSystemResourceAsStream("dict/" + dataFile.getName())); final FileChannel output = new FileOutputStream(dataFile).getChannel(); output.transferFrom(input, 0, 1000000L); input.close(); output.close(); } long fileLastModified = dataFile.lastModified(); if (map == null) { map = new HashMap<String, String>(); } else { if (fileLastModified <= mapLastModified) { return; } map.clear(); } mapLastModified = fileLastModified; BufferedReader bs = new BufferedReader(new InputStreamReader(new FileInputStream(dataFile), "UTF-8")); String accented; while ((accented = bs.readLine()) != null) { String plain = VietUtilities.stripDiacritics(accented); map.put(plain.toLowerCase(), accented); } bs.close(); } catch (IOException e) { map = null; e.printStackTrace(); JOptionPane.showMessageDialog(this, myResources.getString("Cannot_find_\"") + wordList + myResources.getString("\"_in\n") + supportDir.toString(), VietPad.APP_NAME, JOptionPane.ERROR_MESSAGE); } } | private static void copyFile(File in, File out) throws Exception { final FileInputStream input = new FileInputStream(in); try { final FileOutputStream output = new FileOutputStream(out); try { final byte[] buf = new byte[4096]; int readBytes = 0; while ((readBytes = input.read(buf)) != -1) { output.write(buf, 0, readBytes); } } finally { output.close(); } } finally { input.close(); } } | 15,793 |
0 | public RobotList<Location> sort_decr_Location(RobotList<Location> list, String field) { int length = list.size(); Index_value[] enemy_dist = new Index_value[length]; if (field.equals("") || field.equals("location")) { Location cur_loc = this.getLocation(); for (int i = 0; i < length; i++) { enemy_dist[i] = new Index_value(i, distance(cur_loc, list.get(i))); } } else if (field.equals("x")) { for (int i = 0; i < length; i++) { enemy_dist[i] = new Index_value(i, list.get(i).x); } } else if (field.equals("y")) { for (int i = 0; i < length; i++) { enemy_dist[i] = new Index_value(i, list.get(i).y); } } else { say("impossible to sort list - nothing modified"); return list; } boolean permut; do { permut = false; for (int i = 0; i < length - 1; i++) { if (enemy_dist[i].value < enemy_dist[i + 1].value) { Index_value a = enemy_dist[i]; enemy_dist[i] = enemy_dist[i + 1]; enemy_dist[i + 1] = a; permut = true; } } } while (permut); RobotList<Location> new_location_list = new RobotList<Location>(Location.class); for (int i = 0; i < length; i++) { new_location_list.addLast(list.get(enemy_dist[i].index)); } return new_location_list; } | public final String latestVersion() { String latestVersion = ""; try { URL url = new URL(Constants.officialSite + ":80/LatestVersion"); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream())); String str; while ((str = in.readLine()) != null) { latestVersion = str; } in.close(); } catch (MalformedURLException e) { } catch (IOException e) { } return latestVersion; } | 15,794 |
1 | public void testStorageStringWriter() throws Exception { TranslationResponseInMemory r = new TranslationResponseInMemory(2048, "UTF-8"); { Writer w = r.getWriter(); w.write("This is an example"); w.write(" and another one."); w.flush(); assertEquals("This is an example and another one.", r.getText()); } { InputStream input = r.getInputStream(); StringWriter writer = new StringWriter(); try { IOUtils.copy(input, writer, "UTF-8"); } finally { input.close(); writer.close(); } assertEquals("This is an example and another one.", writer.toString()); } try { r.getOutputStream(); fail("Is not allowed as you already called getWriter()."); } catch (IOException e) { } { Writer output = r.getWriter(); output.write(" and another line"); output.write(" and write some more"); assertEquals("This is an example and another one. and another line and write some more", r.getText()); } { r.addText(" and some more."); assertEquals("This is an example and another one. and another line and write some more and some more.", r.getText()); } r.setEndState(ResponseStateOk.getInstance()); assertEquals(ResponseStateOk.getInstance(), r.getEndState()); try { r.getWriter(); fail("Previous line should throw IOException as result closed."); } catch (IOException e) { } } | public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } } | 15,795 |
0 | public static String get(String strUrl) { if (NoMuleRuntime.DEBUG) System.out.println("GET : " + strUrl); try { URL url = new URL(strUrl); URLConnection conn = url.openConnection(); BufferedReader in = new BufferedReader(new InputStreamReader(conn.getInputStream())); String s = ""; String sRet = ""; while ((s = in.readLine()) != null) { sRet += s; } NoMuleRuntime.showDebug("ANSWER: " + sRet); return sRet; } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } return ""; } | private String hashPassword(String password) { if (password != null && password.trim().length() > 0) { try { MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.update(password.trim().getBytes()); BigInteger hash = new BigInteger(1, md5.digest()); return hash.toString(16); } catch (NoSuchAlgorithmException nsae) { } } return null; } | 15,796 |
0 | public static void copyFile(File source, File destination) throws IOException { FileInputStream fis = new FileInputStream(source); FileOutputStream fos = null; try { fos = new FileOutputStream(destination); FileChannel sourceChannel = fis.getChannel(); FileChannel destinationChannel = fos.getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel); destinationChannel.close(); sourceChannel.close(); } finally { if (fos != null) fos.close(); fis.close(); } } | private void copy(String url, File toDir) throws IOException { System.err.println("url=" + url + " dir=" + toDir); if (url.endsWith("/")) { String basename = url.substring(url.lastIndexOf("/", url.length() - 2) + 1); File directory = new File(toDir, basename); directory.mkdir(); LineNumberReader reader = new LineNumberReader(new InputStreamReader(new URL(url).openStream(), "utf-8")); String line; while ((line = reader.readLine()) != null) { System.err.println(line.replace('\t', '|')); int tab = line.lastIndexOf('\t', line.lastIndexOf('\t', line.lastIndexOf('\t') - 1) - 1); System.err.println(tab); char type = line.charAt(tab + 1); String file = line.substring(0, tab); copy(url + URIUtil.encodePath(file) + (type == 'd' ? "/" : ""), directory); } } else { String basename = url.substring(url.lastIndexOf("/") + 1); File file = new File(toDir, basename); System.err.println("copy " + url + " --> " + file); IO.copy(new URL(url).openStream(), new FileOutputStream(file)); } } | 15,797 |
1 | public static void copyFiles(String strPath, String dstPath) throws IOException { File src = new File(strPath); File dest = new File(dstPath); if (src.isDirectory()) { dest.mkdirs(); String list[] = src.list(); for (int i = 0; i < list.length; i++) { String dest1 = dest.getAbsolutePath() + File.separatorChar + list[i]; String src1 = src.getAbsolutePath() + File.separatorChar + list[i]; copyFiles(src1, dest1); } } else { FileInputStream fin = new FileInputStream(src); FileOutputStream fout = new FileOutputStream(dest); int c; while ((c = fin.read()) >= 0) fout.write(c); fin.close(); fout.close(); } } | public static void decompressGZIP(File gzip, File to, long skip) throws IOException { GZIPInputStream gis = null; BufferedOutputStream bos = null; try { bos = new BufferedOutputStream(new FileOutputStream(to)); FileInputStream fis = new FileInputStream(gzip); fis.skip(skip); gis = new GZIPInputStream(fis); final byte[] buffer = new byte[IO_BUFFER]; int read = -1; while ((read = gis.read(buffer)) != -1) { bos.write(buffer, 0, read); } } finally { try { gis.close(); } catch (Exception nope) { } try { bos.flush(); } catch (Exception nope) { } try { bos.close(); } catch (Exception nope) { } } } | 15,798 |
1 | public static void copyFile(String original, String destination) throws Exception { File original_file = new File(original); File destination_file = new File(destination); if (!original_file.exists()) throw new Exception("File with path " + original + " does not exist."); if (destination_file.exists()) throw new Exception("File with path " + destination + " already exists."); FileReader in = new FileReader(original_file); FileWriter out = new FileWriter(destination_file); int c; while ((c = in.read()) != -1) out.write(c); in.close(); out.close(); } | private static void main(String[] args) { try { File f = new File("test.txt"); if (f.exists()) { throw new IOException(f + " already exists. I don't want to overwrite it."); } StraightStreamReader in; char[] cbuf = new char[0x1000]; int read; int totRead; FileOutputStream out = new FileOutputStream(f); for (int i = 0x00; i < 0x100; i++) { out.write(i); } out.close(); in = new StraightStreamReader(new FileInputStream(f)); for (int i = 0x00; i < 0x100; i++) { read = in.read(); if (read != i) { System.err.println("Error: " + i + " read as " + read); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = in.read(cbuf); if (totRead != 0x100) { System.err.println("Simple buffered read did not read the full amount: 0x" + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 7)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); f.delete(); } catch (IOException x) { System.err.println(x.getMessage()); } } | 15,799 |
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