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''' Ammo producers ''' from .util import get_opener, FactoryBase from .module_exceptions import ConfigurationError from .guns.http2 import Http2Ammo import logging logger = logging.getLogger(__name__) class LineReader(object): ''' One line -- one missile ''' def __init__(self, filename, **kwargs): ...
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# Amnesia is a structure that automatically suppresses incoming weights gradually. # In a way, a block will tend to forget what it's learnt and throw away unnecessary inputs # The tendency to forget will counteract with the tendency to learn, until convergence. # Incoming weights cannot be suppressed individually, sin...
{ "repo_name": "Fuchai/Philosophy-Machine", "path": "amne/amnesia.py", "copies": "1", "size": "133047", "license": "apache-2.0", "hash": 4445425205281548300, "line_mean": 97.994047619, "line_max": 133, "alpha_frac": 0.6418934662, "autogenerated": false, "ratio": 1.9261516634334193, "config_test"...
"""A model based controller framework.""" from __future__ import absolute_import from __future__ import division #from __future__ import google_type_annotations from __future__ import print_function import os import inspect currentdir = os.path.dirname(os.path.abspath(inspect.getfile(inspect.currentframe()))) parentd...
{ "repo_name": "google-research/motion_imitation", "path": "mpc_controller/locomotion_controller.py", "copies": "1", "size": "3201", "license": "apache-2.0", "hash": 8780771907206457000, "line_mean": 31.3333333333, "line_max": 86, "alpha_frac": 0.6957200875, "autogenerated": false, "ratio": 3.5885...
"""A model for one project.""" from google.appengine.ext import ndb from ctc.models import user as user_model SETTABLE_FIELDS = [ 'name', 'overview', 'organization_name', 'organization_contact', 'organization_mission', 'details', 'collaboration_link', 'code_link'] class Project(ndb.Model): """A model fo...
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"""A model for one user.""" from google.appengine.ext import ndb from google.appengine.api import users class User(ndb.Model): """A model for one user.""" created_date = ndb.DateTimeProperty(required=True, auto_now_add=True) email = ndb.StringProperty(required=True) name = ndb.StringProperty(default="...
{ "repo_name": "samking/code-the-change-projects", "path": "ctc/models/user.py", "copies": "1", "size": "1642", "license": "apache-2.0", "hash": 8719726212280259000, "line_mean": 32.5102040816, "line_max": 74, "alpha_frac": 0.637637028, "autogenerated": false, "ratio": 3.937649880095923, "config...
"""A model for storing information about how specific images should be cached on slaves. This helps with always having the correct image ahead of time as well as garbage collecting unneeded images on slaves. """ from __future__ import absolute_import from sqlalchemy import Column, DateTime, ForeignKey from sqlalchemy...
{ "repo_name": "dropbox/changes", "path": "changes/models/cached_snapshot_image.py", "copies": "3", "size": "1941", "license": "apache-2.0", "hash": 8131894671979353000, "line_mean": 38.612244898, "line_max": 88, "alpha_frac": 0.7320968573, "autogenerated": false, "ratio": 4.441647597254004, "co...
"""A model for the relationship between a user and a project.""" from google.appengine.ext import ndb from ctc.models import user as user_model class Collaborator(ndb.Model): """A model for relationship between a user and a project.""" user_key = ndb.KeyProperty(required=True, kind=user_model.User) creat...
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"""A model of temperature diffusion over a rectangular plate.""" import numpy as np import yaml class Diffusion(object): """Model of temperature diffusion on a plate.""" def __init__(self, config_file=None): """Initialize the model.""" if config_file is not None: with open(config...
{ "repo_name": "csdms/bmi-live-2017", "path": "bmi_live/diffusion.py", "copies": "1", "size": "1677", "license": "mit", "hash": 7805895429506945000, "line_mean": 30.0555555556, "line_max": 77, "alpha_frac": 0.5122242099, "autogenerated": false, "ratio": 3.479253112033195, "config_test": false, ...
"""A model organizes the training of a neural network. The general structure, and especial the fit method, are similar to the keras Model class. """ #%% import copy import numpy as np import time import warnings import natural_bm.backend as B import natural_bm.callbacks as cbks from natural_bm.utils import merge_Ord...
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"""A Model whose structure is defined by an ontology.""" from deepchem.models import TensorGraph from deepchem.models.tensorgraph import layers from deepchem.metrics import to_one_hot from deepchem.utils import get_data_dir, download_url import tensorflow as tf import math import os class OntologyModel(TensorGraph):...
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# A modification of rnn.py by Razvan Pascanu import numpy as np import theano import theano.tensor as TT from theano.compat.python2x import OrderedDict # number of hidden units n = 50 # number of input units nin = 5 # number of output units nout = 5 # input (where first dimension is time) u = TT.matrix() # target (wh...
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# A modification version from chainercv repository. # (See https://github.com/chainer/chainercv/blob/master/chainercv/evaluations/eval_detection_voc.py) from __future__ import division import os from collections import defaultdict import numpy as np from maskrcnn_benchmark.structures.bounding_box import BoxList from m...
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"""A modified copy of ProxyTypes 0.9 (https://pypi.io/project/ProxyTypes/).""" """ ========== NOTICE OF MODIFICATION ========== This version HAS BEEN MODIFIED from the original 'proxies.py' file by Luke Deen Taylor. The original file was published on July 20, 2006. Modifications made on July 18, 2016: - Rewriting ...
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"""A modified image folder class We modify the official PyTorch image folder (https://github.com/pytorch/vision/blob/master/torchvision/datasets/folder.py) so that this class can load images from both current directory and its subdirectories. """ import torch.utils.data as data from PIL import Image import os IMG_E...
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# A modified main pdb debugger loop (see pdb.py in the Python library!) from pdb import * import sys,os,traceback def main(): mainpyfile = sys.argv[1] # Get script filename if not os.path.exists(mainpyfile): print 'Error:', mainpyfile, 'does not exist' sys.exit(1) del sys.argv[0] ...
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# A modified version of https://github.com/petermuehlbacher/diffusion-maps-algorithm/blob/master/diffusion%20maps.py # A python implementation of the diffusion maps algorithm introduced by [Lafon](https://sites.google.com/site/stefansresearchpapers/home/dissertation.pdf). import numpy as np from numpy import linalg as...
{ "repo_name": "govinda-kamath/clustering_on_transcript_compatibility_counts", "path": "Trapnell_pipeline/diffusion_maps.py", "copies": "1", "size": "3935", "license": "mit", "hash": 272965916727974600, "line_mean": 29.503875969, "line_max": 155, "alpha_frac": 0.5730622618, "autogenerated": false, ...
# A modified version of the implementation from the following paper: # TENER: Adapting Transformer Encoder for Named Entity Recognition # Hang Yan, Bocao Deng, Xiaonan Li, Xipeng Qiu import math import torch import torch.nn.functional as F from torch import Tensor, nn from hanlp.common.structure import ConfigTracker ...
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"""A module containg the JavaLikeScanner class.""" class JavaLikeScanner(object): """ A class which allows a given string to be scanned through and broken up into various tokens. """ def __init__(self, contents): """ Create the scanner and initalize its contents. :param str contents: The contents of the sc...
{ "repo_name": "ExcaliburZero/javalikescanner", "path": "javalikescanner/javalikescanner.py", "copies": "1", "size": "4414", "license": "mit", "hash": 8343071674538951000, "line_mean": 28.0394736842, "line_max": 98, "alpha_frac": 0.6746714998, "autogenerated": false, "ratio": 3.5482315112540195, ...
"""A module containing a canonicalized game""" import functools import numpy as np from gameanalysis import gamereader from gameanalysis import rsgame from gameanalysis import utils # TODO There's an issue here where incomplete payoffs for single strategy roles # contribute to incomplete profiles. There's not an ob...
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'''A module containing a class for representing and manipulating creature information from the Pathfinder RPG''' import re import string __all__ = ['Creature'] ABILITIES = ['Str', 'Dex', 'Con', 'Int', 'Wis', 'Cha'] ATTRIBUTES = [ 'DEFENSE', 'hp', 'AC', 'touch', 'flat-footed', 'Fort', 'Ref', 'Will', 'Def...
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'''A module containing a class for representing a Pathfinder RPG character.''' import json from pf_class import PFClass from pf_class_instance import PFClassInstance __all__ = ['PFCharacter'] CLASS_DIR = "res/json/class/" JSON_EXTENSION = ".json" class PFCharacter(object): '''Class representing a character...
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'''A module containing a class for representing a Pathfinder RPG character\'s investment in a particular character class''' from pf_class import PFClass __all__ = ['PFClassInstance'] class PFClassInstance(object): '''Class representing a Pathfinder RPG character\'s investment in a particular character c...
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'''A module containing a class for storing Creature objects in a SQLite database.''' import csv import sqlite3 __all__ = ['CreatureDB'] class CreatureDB(object): '''Class for storing Creature objects in a SQLite database.''' def __init__(self, name='creature.db', use_nominal_cr=False): self....
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"""A module containing a core representation of an IATI Dataset.""" from lxml import etree import iati.exceptions import iati.utilities import iati.validator class Dataset: """Representation of an IATI XML file that may be validated against a Schema. Attributes: xml_str (str): An XML string represent...
{ "repo_name": "IATI/iati.core", "path": "iati/data.py", "copies": "1", "size": "10271", "license": "mit", "hash": -513188287255252540, "line_mean": 39.12109375, "line_max": 186, "alpha_frac": 0.6252555739, "autogenerated": false, "ratio": 4.522677234698371, "config_test": false, "has_no_keywo...
"""A module containing a core representation of IATI Codelists.""" import collections from lxml import etree import iati.resources import iati.utilities class Codelist: """Representation of a Codelist as defined within the IATI SSOT. Attributes: complete (bool): Whether the Codelist is complete or no...
{ "repo_name": "IATI/iati.core", "path": "iati/codelists.py", "copies": "1", "size": "8670", "license": "mit", "hash": -4449260308753380400, "line_mean": 32.7354085603, "line_max": 217, "alpha_frac": 0.6176470588, "autogenerated": false, "ratio": 4.668820678513732, "config_test": false, "has_n...
"""A module containing a core representation of IATI Rulesets. Todo: Consider how we should handle lxml errors. Remove references to `case`. """ # no-member errors are due to using `setattr()` # pylint: disable=no-member import collections import decimal import json import re import sre_constants from dateti...
{ "repo_name": "IATI/iati.core", "path": "iati/rulesets.py", "copies": "1", "size": "35984", "license": "mit", "hash": -1227688374581741000, "line_mean": 35.3474747475, "line_max": 191, "alpha_frac": 0.613355936, "autogenerated": false, "ratio": 4.424443624738719, "config_test": false, "has_no...
"""A module containing a core representation of IATI Schemas.""" import collections from lxml import etree import iati.codelists import iati.constants import iati.exceptions import iati.resources import iati.utilities class Schema: """Representation of a Schema as defined within the IATI SSOT. This is used as a b...
{ "repo_name": "IATI/iati.core", "path": "iati/schemas.py", "copies": "1", "size": "9284", "license": "mit", "hash": 2082357394841270000, "line_mean": 37.3636363636, "line_max": 224, "alpha_frac": 0.6460577337, "autogenerated": false, "ratio": 4.406264831514001, "config_test": false, "has_no_k...
"""A module containing a core representation of IATI Version Numbers, plus how they are handled and compared. Todo: Check whether there is any other version-related functionality to bring into this module. Ensure that everything in this module should be here. """ from decimal import Decimal import re import ...
{ "repo_name": "IATI/iati.core", "path": "iati/version.py", "copies": "1", "size": "19616", "license": "mit", "hash": 6932783670576749000, "line_mean": 35.6654205607, "line_max": 193, "alpha_frac": 0.6740925775, "autogenerated": false, "ratio": 4.428990742831339, "config_test": false, "has_no_...
'''A module containing a function for building Creature objects from root HtmlElement objects related to d20pfsrd.com Bestiary pages''' import re import string from core.creature import Creature __all__ = ['build'] ABILITIES = ['Str', 'Dex', 'Con', 'Int', 'Wis', 'Cha'] ATTRIBUTES = [ 'DEFENSE', 'hp', 'AC', ...
{ "repo_name": "lot9s/pathfinder-rpg-utils", "path": "data-mining/bestiary/core/builders/creature/d20pfsrd.py", "copies": "1", "size": "12506", "license": "mit", "hash": -249179587914230460, "line_mean": 35.7823529412, "line_max": 76, "alpha_frac": 0.6418519111, "autogenerated": false, "ratio": 3....
"""A module containing analytical objects specific to a particular experiment. """ import os import numpy as np import pandas as pd from whaler.analysis import Analysis class Reactions(): """ """ def __init__(self): self.A = Analysis() # Analysis output filenames. self.cr...
{ "repo_name": "tristanbrown/whaler", "path": "whaler/custom.py", "copies": "1", "size": "7129", "license": "mit", "hash": -395039050241628600, "line_mean": 32.3177570093, "line_max": 116, "alpha_frac": 0.4821153037, "autogenerated": false, "ratio": 3.2419281491587086, "config_test": false, "h...
'''a module containing analytic tools necessary for understanding the behavior of learning automata.''' # Written by Steven Porretta. class Tsetlin(object): '''Analysis tools for the Tsetlin automaton.''' def stationary_probability_analytic(c, N): '''This computes the exact stationary probability...
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"""A module containing classes for move refactoring `create_move()` is a factory for creating move refactoring objects based on inputs. """ from rope.base import (pyobjects, codeanalyze, exceptions, pynames, taskhandle, evaluate, worder, libutils) from rope.base.change import ChangeSet, ChangeC...
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"""A module containing classes for move refactoring `create_move()` is a factory for creating move refactoring objects based on inputs. """ from rope.base import pyobjects, codeanalyze, exceptions, pynames, taskhandle, evaluate, worder from rope.base.change import ChangeSet, ChangeContents, MoveResource from rope.ref...
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"""A module containing convenient methods for general machine learning""" from __future__ import print_function from __future__ import division from __future__ import unicode_literals from __future__ import absolute_import from builtins import zip from builtins import int from builtins import range from future import ...
{ "repo_name": "wittawatj/kernel-gof", "path": "kgof/util.py", "copies": "1", "size": "9350", "license": "mit", "hash": -1391773571418708000, "line_mean": 27.1626506024, "line_max": 104, "alpha_frac": 0.5960427807, "autogenerated": false, "ratio": 3.2476554359152483, "config_test": false, "has...
"""A module containing convenient methods for general machine learning""" from __future__ import print_function from builtins import object __author__ = 'wittawat' import autograd.numpy as np import time class ContextTimer(object): """ A class used to time an executation of a code snippet. Use it with w...
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"""A module containing convenient methods for general machine learning""" __author__ = 'wittawat' import numpy as np import time class ContextTimer(object): """ A class used to time an executation of a code snippet. Use it with with .... as ... For example, with ContextTimer() as t: ...
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""" A module containing example functions for reading and plotting user output It is important to make sure the functions work as the error messages can be varied and messy to handle. The software raises ImportError if there is something wrong with importing or running the code. """ import matplotlib.pyplot as plt ...
{ "repo_name": "smarisa/sdpt11", "path": "neronet/scripts/example.py", "copies": "2", "size": "2671", "license": "mit", "hash": 8054393256256765000, "line_mean": 32.8101265823, "line_max": 78, "alpha_frac": 0.6166229876, "autogenerated": false, "ratio": 4.016541353383459, "config_test": false, ...
'''A module containing functions that allow one to scrape data from the Bestiary pages of d20pfsrd.com and place it in a database''' import argparse import traceback from lxml.html import parse from core.builders.creature.d20pfsrd import build as d20_build from core.builders.creature.dict import build as dict_build ...
{ "repo_name": "lot9s/pathfinder-rpg-utils", "path": "data-mining/bestiary/crawler.py", "copies": "1", "size": "10350", "license": "mit", "hash": 6754591112642021000, "line_mean": 34.2040816327, "line_max": 80, "alpha_frac": 0.6418357488, "autogenerated": false, "ratio": 3.7870472008781557, "con...
"""A module containing `numpy`-specific plugins for mypy.""" from __future__ import annotations import typing as t import numpy as np try: import mypy.types from mypy.types import Type from mypy.plugin import Plugin, AnalyzeTypeContext from mypy.nodes import MypyFile, ImportFrom, Statement from ...
{ "repo_name": "anntzer/numpy", "path": "numpy/typing/mypy_plugin.py", "copies": "6", "size": "4408", "license": "bsd-3-clause", "hash": -3188405779034545000, "line_mean": 32.6488549618, "line_max": 88, "alpha_frac": 0.5798548094, "autogenerated": false, "ratio": 3.704201680672269, "config_test"...
"""A module containing tests for the library representation of Codelists.""" import copy import pytest from lxml import etree import iati.codelists class TestCodelistsNonClass: """Test codelists functionality that is not contained within a class. Note: There was once functionality regarding mapping f...
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"""A module containing tests for the library representation of default values.""" import pytest import iati.codelists import iati.constants import iati.default import iati.schemas import iati.tests.utilities class TestDefault: """A container for tests relating to Default data.""" @pytest.fixture(params=[ ...
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"""A module containing tests for the library representation of IATI data. Todo: Implement tests for strict checking once validation work is underway. """ import collections import math from lxml import etree import pytest import iati.data import iati.default import iati.tests.utilities class TestDatasets: ""...
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"""A module containing tests for the pyIATI representation of Standard metadata.""" import copy import math import operator import pytest import iati.tests.utilities from iati.tests.fixtures.versions import iativer, semver, split_decimal, split_iativer, split_semver class TestVersionInit: """A container for tests...
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""" A module containing the default routes. """ from flask import Blueprint, render_template, abort, session, redirect, url_for, request from jinja2 import TemplateNotFound from forms import RatingForm from datetime import datetime import Pyro4 import requests ES_URL = 'https://search-net302test-hsws64h5osjjsdgl7krzl3...
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"""A module containing validation functionality.""" import sys from lxml import etree import yaml import iati.default import iati.resources class ValidationError: """A base class to encapsulate information about Validation Errors.""" # pylint: disable=too-many-instance-attributes def __init__(self, err_...
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""" A module designed to hold onto encode.* decorated functions. Each function decorated by encode is returned untouched. However, they are registered within this module for retrieval by factories when encoding from a pymm element. This module (and it's decorations) should be used in-place of writin...
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"""A module designed to interact with SCSGate. See: https://github.com/flavio/scsgate """ # Always prefer setuptools over distutils from setuptools import setup, find_packages # To use a consistent encoding from codecs import open from os import path here = path.abspath(path.dirname(__file__)) # Get the long descri...
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''' A moduled used by maxent.py and phlearn.py to find the ideal weights for a tableau. ''' import megatableau import scipy, scipy.optimize import math import numpy as np ### HELPER FUNCTIONS FOR CALCULATING PROBABILITY ### def maxent_value(weights, tableau, ur, sr): """ Compute maxent value P* = exp(harmony) fo...
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# Copyright 2015 Steven G. Decker # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agreed to in writin...
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""" A module for command parsing The command module deals with parsing a cli command properly. It supports abbreviated commands ("a" is parsed as the command "add" if there is no other command beginning with "a" on that level) and has methods useful for tab completion of both commands and external valu...
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"""A module for computing regret and social welfare of profiles""" import itertools import multiprocessing import numpy as np from scipy import optimize def pure_strategy_deviation_gains(game, prof): """Returns the pure strategy deviations gains The result is a compact array of deviation gains. Each element...
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"""A module for computing regret and social welfare of profiles""" import numpy as np def pure_strategy_deviation_pays(game, profile): """Returns the pure strategy deviation payoffs The result is a compact array of deviation payoffs. Each element corresponds to the payoff of deviating to strategy i from ...
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"""A module for consuming the Penn Dining API""" import datetime from .base import WrapperBase BASE_URL = "https://esb.isc-seo.upenn.edu/8091/open_data/dining/" V2_BASE_URL = "https://esb.isc-seo.upenn.edu/8091/open_data/dining/v2/?service=" ENDPOINTS = { 'MENUS': BASE_URL + 'menus', 'VENUES': BASE_URL + 've...
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"""A module for consuming the Penn Registrar API""" from os import path import requests from base import WrapperBase BASE_URL = "https://esb.isc-seo.upenn.edu/8091/open_data/transit/" ENDPOINTS = { 'APC': BASE_URL + 'apc', 'MDT': BASE_URL + 'mdt', 'TRANSAPC': BASE_URL + 'transapc', 'STOPINVENTORY': BAS...
{ "repo_name": "parkerh/freeclassrooms", "path": "penn/transit.py", "copies": "1", "size": "2640", "license": "mit", "hash": 3841105784985343000, "line_mean": 27.085106383, "line_max": 77, "alpha_frac": 0.5598484848, "autogenerated": false, "ratio": 3.5246995994659547, "config_test": false, "h...
"""A module for consuming the Penn Registrar API""" from os import path import requests from base import WrapperBase BASE_URL = "https://esb.isc-seo.upenn.edu/8091/open_data/dining/" ENDPOINTS = { 'MENUS': BASE_URL + 'menus', 'VENUES': BASE_URL + 'venues', } class Dining(WrapperBase): """The client for t...
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"""A module for consuming the Penn Transit API""" from .base import WrapperBase BASE_URL = "https://esb.isc-seo.upenn.edu/8091/open_data/transit/" ENDPOINTS = { 'APC': BASE_URL + 'apc', 'MDT': BASE_URL + 'mdt', 'TRANSAPC': BASE_URL + 'transapc', 'STOPINVENTORY': BASE_URL + 'stopinventory', 'STOPTIM...
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"""A module for creating docstrings for sphinx ``data`` domains.""" import re import textwrap _docstrings_list = [] def add_newdoc(name, value, doc): _docstrings_list.append((name, value, doc)) def _parse_docstrings(): type_list_ret = [] for name, value, doc in _docstrings_list: s = textwrap.d...
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"""A module for creating docstrings for sphinx ``data`` domains.""" import re import textwrap from ._generic_alias import NDArray _docstrings_list = [] def add_newdoc(name: str, value: str, doc: str) -> None: """Append ``_docstrings_list`` with a docstring for `name`. Parameters ---------- name : ...
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"""A module for dealing with BMP bitmap image files.""" def write_grayscale(filename, pixels): """Create and write a grayscale BMP file.""" """ Args: filename: The name of the BMP file to be created. pixels: A rectangular image stored as a sequence of rows. Each row must be an...
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"""A module for dealing with BMP bitmap image files.""" def write_grayscale(filename, pixels): """Creates and writes a grayscale BMP file Args: filename: The name of the BMP file to be crated. pixels: A rectangular image stored as a sequence of rows. Each row must be an iterable ...
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"""A module for defining structured request species. :author: Matthew Gidden <matthew.gidden _at_ gmail.com> """ import itertools import numpy as np import random import math from collections import OrderedDict, defaultdict, Iterable from cyclopts import tools as cyctools from cyclopts import cyclopts_io as cycio fr...
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"""A module for defining structured supply species. :author: Matthew Gidden <matthew.gidden _at_ gmail.com> """ import itertools import numpy as np import random import math from collections import OrderedDict, defaultdict, Iterable, namedtuple from cyclopts import tools as cyctools from cyclopts import cyclopts_io ...
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"""A module for displaying tabular data to humans. This is currently a work in progress. Example: -------- from ... import table ... t = t.Table(padding=1) t.SetColumns(['Country', 'Total Population', 'Populous Cities']) t.AppendRow(['China', '1,354,040,000', ['Shanghai', 'Beijing', 'Tianji...
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"""A module for dynamic, incremental ctypes code generation. See the 'include' function for usage information. """ import sys import os import time import bz2 import cPickle import tempfile try: # md5 is deprecated in Python 2.5, so use hashlib if available from hashlib import md5 except ImportError: from ...
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"""A module for dynamic, incremental ctypes code generation. See the 'include' function for usage information. """ import sys, os, time, bz2, cPickle, tempfile try: # md5 is deprecated in Python 2.5, so use hashlib if available from hashlib import md5 except ImportError: from md5 import new as md5 import ...
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"""A module for extracting information from lists of dicts for creating geodatabase fields. """ from __future__ import ( absolute_import, print_function, unicode_literals, division) import re from datetime import date, time, datetime FIELD_TYPE_TEXT = "TEXT" FIELD_TYPE_FLOAT = "FLOAT" FIELD_TYPE_DOUBLE = "DOUBL...
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"""A module for forms used""" from wtforms import StringField, PasswordField, validators, SubmitField, TextAreaField from flask_wtf import FlaskForm class SignupForm(FlaskForm): """The signup form""" email = StringField( 'Email Address', [ validators.data_required(), val...
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"""A module for function minimization.""" # pylint: disable=too-many-arguments, too-many-instance-attributes from average import EWMA import numpy as np from num_utils import saxpy, BILINEAR, sdot, EPS, resize, roll2 class AdamOptimizer: """Implements the Adam gradient descent optimizer [4] with iterate averag...
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""" A module for handling HiSeq-specific files and folders """ import os import glob import csv import scilifelab.illumina as illumina class HiSeqRun(illumina.IlluminaRun): def __init__(self, run_dir, samplesheet=None): illumina.IlluminaRun.__init__(self, run_dir, samplesheet) if self.samplesheet_...
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# a module for handling interaction with the Flickr photo-sharing service import os import urllib, urllib2, urlparse, mimetools, mimetypes import xml.dom.minidom import hashlib import random from fetch import GET_CMD, Request API_KEY="f29c6d8fa5d950131c4ae13adc55700d" SECRET="037ec6eec0e91cab" BASE_URL="http://www....
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""" A module for handling MiSeq-specific files and folders """ import os import re import glob from collections import OrderedDict, defaultdict import scilifelab.illumina as illumina from scilifelab.illumina.hiseq import HiSeqSampleSheet def group_fastq_files(fastq_files): """Divide the input fastq files into ...
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"""A module for housing the Cursor class. Exported Classes: Cursor -- Class for representing a database cursor. """ from collections import deque from .statement import Statement, PreparedStatement from .exception import Error, NotSupportedError, ProgrammingError class Cursor(object): """Class for represent...
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"""A module for housing the datatype classes. Exported Classes: Binary -- Class for a Binary object Exported Functions: DateFromTicks -- Converts ticks to a Date object. TimeFromTicks -- Converts ticks to a Time object. TimestampFromTicks -- Converts ticks to a Timestamp object. DateToTicks -- Converts a Date object ...
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"""A module for implementing interaction between MIDI and SequenceGenerators.""" import abc import threading import time # internal imports import tensorflow as tf from magenta.protobuf import generator_pb2 from magenta.protobuf import music_pb2 class MidiInteractionException(Exception): """Base class for except...
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"""A module for implementing interaction between MIDI and SequenceGenerators.""" import abc import threading import time # internal imports import tensorflow as tf import magenta from magenta.protobuf import generator_pb2 from magenta.protobuf import music_pb2 class MidiInteractionException(Exception): """Base c...
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"""A module for inferring objects For more information see the documentation in `rope.base.oi` package. """ import rope.base.builtins import rope.base.pynames import rope.base.pyobjects from rope.base import evaluate, utils, arguments from rope.base.oi.type_hinting.factory import get_type_hinting_factory _ignore_in...
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# a module for interacting with Amazon SimpleDB using Python pandas (and boto of course) import pandas as pd import boto.sdb import datetime as dt import dataframe_utils from datetime_utils import * class Creds: def __init__(self, ID, secret): self.ID = ID self.secret = secret # a domain is equiva...
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"""A module for interactive testing. Use: $ python >>> from csrv.model import setup_game >>> setup_game.play() this will prompt you for responses to choices if you break out at any point you can access the game object as 'setup_game.g' and can resume the interactive play with setup_game.play(setup_game.g) """ ...
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"""A module for interfacing with the MIDI environment.""" import abc from collections import defaultdict from collections import deque import Queue import re import threading import time # internal imports import mido import tensorflow as tf # TODO(adarob): Use flattened imports. from magenta.common import concurren...
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"""A module for interfacing with the MIDI environment.""" import abc from collections import deque import logging import Queue import re import threading import time # internal imports import mido # TODO(adarob): Use flattened imports. from magenta.common import concurrency from magenta.protobuf import music_pb2 _D...
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"""A module for I/O helper functions, classes, etc.""" from collections import defaultdict import cyclopts.tools as tools class PathMap(object): """A simple container class for mapping columns to Hdf5 paths""" def __init__(self, col=None): """Parameters ---------- col : str ...
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"""A module for Jython emulating (a small part of) CPython's multiprocessing. With this, pygrametl can be made to use multiprocessing, but actually use threads when used from Jython (where there is no GIL). """ # Copyright (c) 2011-2014, Aalborg University (chr@cs.aau.dk) # All rights reserved. # Redistribution...
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""" A module for Jython emulating (a small part of) CPython's multiprocessing. With this, pygrametl can be made to use multiprocessing, but actually use threads when used from Jython (where there is no GIL). """ # Copyright (c) 2011, Christian Thomsen (chr@cs.aau.dk) # All rights reserved. # Redistribution ...
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""" A module for managing the AXDebug I*Contexts """ from . import gateways, axdebug import pythoncom, win32com.server.util # Utility function for wrapping object created by this module. from .util import _wrap, _wrap_remove, trace from . import adb class DebugCodeContext(gateways.DebugCodeContext, gateways.DebugDoc...
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""" A module for managing the AXDebug I*Contexts """ import gateways, axdebug import pythoncom, win32com.server.util # Utility function for wrapping object created by this module. from .util import _wrap, _wrap_remove, trace from . import adb class DebugCodeContext(gateways.DebugCodeContext, gateways.DebugDocumentCo...
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"""A module for manipulating Images, which are specially wrapped Pygame surfaces. """ import pygame import spyral import copy def _new_spyral_surface(size): """ Internal method for creating a new Spyral-compliant Pygame surface. """ return pygame.Surface((int(size[0]), int(s...
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""" A module for mapping operators to their corresponding eigenstates and vice versa It contains a global dictionary with eigenstate-operator pairings. If a new state-operator pair is created, this dictionary should be updated as well. It also contains functions operators_to_state and state_to_operators for mapping b...
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"""A module for networking related utilities.""" import random import socket def get_local_ip(): """ Get the local IP address. Equivalent to https://github.com/stencila/executa/blob/753207cb31298578497d978265c718e20b583a05/src/tcp/util.ts#L15 Thanks to https://stackoverflow.com/questions/166506/find...
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"""A module for parsing a query and searching for TF2 items It supports class based search, eg: 'engineer hats' It also supports alias based search, eg: 'engi hats' Regular search, eg: 'Meet the Medic' Slot search, eg: 'primary weps' Set search, eg: 'the saharan spy set' Price search, eg: 'unique > 1 ref hat' Price vis...
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'''A module for parsing context free grammar specifications using an extended syntax. This extended syntax allows for symbols with labels longer than one character. Nonterminal names are written between angle brackets (<...>), and terminal names are written between double quotes ("..."). Example: <Sentence> -> <Noun-p...
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"""A module for parsing vim-otl into a tree.""" import sys class LineError(Exception): """An error that happens during line parsing.""" pass class Object: """Represents an OTL object. This object may be header, body, or perhaps some other kind of a body; preformatted or user-defined (or user-de...
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"""A module for periodically displaying progress on a hierarchy of tasks and estimating time to completion. >>> import progress, datetime >>> progress.set_resolution(datetime.datetime.resolution) # show all messages, don't sample >>> progress.start_task('Repetition', 2) >>> for rep in range(2): # doctest: +ELLIPSIS ...
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"""A module for querying datasources (e.g., the World Bank Indicators). They can optionally be stored locally to reduce internet queries. """ import contextlib import json import logging import os import requests import warnings import pandas as pd from salamanca.utils import backend WB_INDICATORS = { 'SP.POP....
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"""A module for querying for articles from the NYTimes.""" import sys import os wd = os.path.abspath('.') sys.path.append(wd + '/../') import pandas as pd import numpy as np from datetime import timedelta from requests import get from time import sleep from os.path import exists from pymongo import MongoClient from ge...
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"""A module for representing universal morphosyntactic feature bundles.""" from typing import Dict, List, Optional, Tuple, Type, Union from cltk.core.exceptions import CLTKException from cltk.morphology.universal_dependencies_features import * __author__ = ["John Stewart <free-variation>"] class Morphosy...
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"""A module for running Ansible by wrapping command line.""" from os.path import join import subprocess import logging log = logging.getLogger(__name__) class AnsibleRunner(object): """Responsible for running Ansible playbook.""" def __init__(self, playbook_root, inventory_filename, playbook_path, ...
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"""A module for running Ansible-related steps.""" from string import Template INVENTORY_TEMPLATE = Template(""" jetstream-iu0.galaxyproject.org ansible_connection=local [baseenv] jetstream-iu0.galaxyproject.org [baseenv:children] galaxynodes # "contoller" node(s) for this cloud (not necessarily a slurm controller) ...
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"""A module for scraping CareerBuilder for jobs. This module is the driver for a CareerBuilder scraper. It controls the process of instantiating a Selenium browser to scrape, and controlling that browser throughout the entire process. It also handles the Threading, parsing, and storage that takes place. Usage: ...
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"""A module for scraping Glassdoor for jobs. This module is the driver for a Glassdoor scraper. It controls the process of instantiating a Selenium browser to scrape, and controls that browser throughout the entire process. It also handles parsing and storing our results. Usage: python job_scraper.py <job ti...
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"""A module for scraping Indeed for jobs. This module is the driver for an Indeed scraper. It controls the process of issuing requests, parsing the contents of those requests, and storing them. It also handles the threading and multiprocessing that is used to speed up the scraping process. Usage: python job_...
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