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---
pretty_name: Observed Antibody Dataset
license: cc-by-4.0
configs:
- config_name: default
features:
# Metadata fields
- name: meta_Run
dtype: string
- name: meta_Link
dtype: string
- name: meta_Author
dtype: string
- name: meta_Species
dtype: string
- name: meta_Age
dtype: string
- name: meta_BSource
dtype: string
- name: meta_BType
dtype: string
- name: meta_Vaccine
dtype: string
- name: meta_Disease
dtype: string
- name: meta_Subject
dtype: string
- name: meta_Longitudinal
dtype: string
- name: meta_Unique sequences
dtype: int64
- name: meta_Isotype
dtype: string
- name: meta_Chain
dtype: string
- name: source_file
dtype: string
# Heavy chain fields
- name: sequence_id_heavy
dtype: string
- name: sequence_heavy
dtype: string
- name: locus_heavy
dtype: string
- name: stop_codon_heavy
dtype: string
- name: vj_in_frame_heavy
dtype: string
- name: v_frameshift_heavy
dtype: string
- name: productive_heavy
dtype: string
- name: rev_comp_heavy
dtype: string
- name: complete_vdj_heavy
dtype: string
- name: v_call_heavy
dtype: string
- name: d_call_heavy
dtype: string
- name: j_call_heavy
dtype: string
- name: sequence_alignment_heavy
dtype: string
- name: germline_alignment_heavy
dtype: string
- name: sequence_alignment_aa_heavy
dtype: string
- name: germline_alignment_aa_heavy
dtype: string
- name: v_alignment_start_heavy
dtype: string
- name: v_alignment_end_heavy
dtype: string
- name: d_alignment_start_heavy
dtype: string
- name: d_alignment_end_heavy
dtype: string
- name: j_alignment_start_heavy
dtype: string
- name: j_alignment_end_heavy
dtype: string
- name: v_sequence_alignment_heavy
dtype: string
- name: v_sequence_alignment_aa_heavy
dtype: string
- name: v_germline_alignment_heavy
dtype: string
- name: v_germline_alignment_aa_heavy
dtype: string
- name: d_sequence_alignment_heavy
dtype: string
- name: d_sequence_alignment_aa_heavy
dtype: string
- name: d_germline_alignment_heavy
dtype: string
- name: d_germline_alignment_aa_heavy
dtype: string
- name: j_sequence_alignment_heavy
dtype: string
- name: j_sequence_alignment_aa_heavy
dtype: string
- name: j_germline_alignment_heavy
dtype: string
- name: j_germline_alignment_aa_heavy
dtype: string
- name: fwr1_heavy
dtype: string
- name: fwr1_aa_heavy
dtype: string
- name: cdr1_heavy
dtype: string
- name: cdr1_aa_heavy
dtype: string
- name: fwr2_heavy
dtype: string
- name: fwr2_aa_heavy
dtype: string
- name: cdr2_heavy
dtype: string
- name: cdr2_aa_heavy
dtype: string
- name: fwr3_heavy
dtype: string
- name: fwr3_aa_heavy
dtype: string
- name: fwr4_heavy
dtype: string
- name: fwr4_aa_heavy
dtype: string
- name: cdr3_heavy
dtype: string
- name: cdr3_aa_heavy
dtype: string
- name: junction_heavy
dtype: string
- name: junction_length_heavy
dtype: string
- name: junction_aa_heavy
dtype: string
- name: junction_aa_length_heavy
dtype: string
- name: v_score_heavy
dtype: string
- name: d_score_heavy
dtype: string
- name: j_score_heavy
dtype: string
- name: v_cigar_heavy
dtype: string
- name: d_cigar_heavy
dtype: string
- name: j_cigar_heavy
dtype: string
- name: v_support_heavy
dtype: string
- name: d_support_heavy
dtype: string
- name: j_support_heavy
dtype: string
- name: v_identity_heavy
dtype: string
- name: d_identity_heavy
dtype: string
- name: j_identity_heavy
dtype: string
- name: v_sequence_start_heavy
dtype: string
- name: v_sequence_end_heavy
dtype: string
- name: v_germline_start_heavy
dtype: string
- name: v_germline_end_heavy
dtype: string
- name: d_sequence_start_heavy
dtype: string
- name: d_sequence_end_heavy
dtype: string
- name: d_germline_start_heavy
dtype: string
- name: d_germline_end_heavy
dtype: string
- name: j_sequence_start_heavy
dtype: string
- name: j_sequence_end_heavy
dtype: string
- name: j_germline_start_heavy
dtype: string
- name: j_germline_end_heavy
dtype: string
- name: fwr1_start_heavy
dtype: string
- name: fwr1_end_heavy
dtype: string
- name: cdr1_start_heavy
dtype: string
- name: cdr1_end_heavy
dtype: string
- name: fwr2_start_heavy
dtype: string
- name: fwr2_end_heavy
dtype: string
- name: cdr2_start_heavy
dtype: string
- name: cdr2_end_heavy
dtype: string
- name: fwr3_start_heavy
dtype: string
- name: fwr3_end_heavy
dtype: string
- name: fwr4_start_heavy
dtype: string
- name: fwr4_end_heavy
dtype: string
- name: cdr3_start_heavy
dtype: string
- name: cdr3_end_heavy
dtype: string
- name: np1_heavy
dtype: string
- name: np1_length_heavy
dtype: string
- name: np2_heavy
dtype: string
- name: np2_length_heavy
dtype: string
- name: c_region_heavy
dtype: string
- name: Isotype_heavy
dtype: string
- name: Redundancy_heavy
dtype: string
- name: ANARCI_numbering_heavy
dtype: string
- name: ANARCI_status_heavy
dtype: string
# Light chain fields
- name: sequence_id_light
dtype: string
- name: sequence_light
dtype: string
- name: locus_light
dtype: string
- name: stop_codon_light
dtype: string
- name: vj_in_frame_light
dtype: string
- name: v_frameshift_light
dtype: string
- name: productive_light
dtype: string
- name: rev_comp_light
dtype: string
- name: complete_vdj_light
dtype: string
- name: v_call_light
dtype: string
- name: d_call_light
dtype: string
- name: j_call_light
dtype: string
- name: sequence_alignment_light
dtype: string
- name: germline_alignment_light
dtype: string
- name: sequence_alignment_aa_light
dtype: string
- name: germline_alignment_aa_light
dtype: string
- name: v_alignment_start_light
dtype: string
- name: v_alignment_end_light
dtype: string
- name: d_alignment_start_light
dtype: string
- name: d_alignment_end_light
dtype: string
- name: j_alignment_start_light
dtype: string
- name: j_alignment_end_light
dtype: string
- name: v_sequence_alignment_light
dtype: string
- name: v_sequence_alignment_aa_light
dtype: string
- name: v_germline_alignment_light
dtype: string
- name: v_germline_alignment_aa_light
dtype: string
- name: d_sequence_alignment_light
dtype: string
- name: d_sequence_alignment_aa_light
dtype: string
- name: d_germline_alignment_light
dtype: string
- name: d_germline_alignment_aa_light
dtype: string
- name: j_sequence_alignment_light
dtype: string
- name: j_sequence_alignment_aa_light
dtype: string
- name: j_germline_alignment_light
dtype: string
- name: j_germline_alignment_aa_light
dtype: string
- name: fwr1_light
dtype: string
- name: fwr1_aa_light
dtype: string
- name: cdr1_light
dtype: string
- name: cdr1_aa_light
dtype: string
- name: fwr2_light
dtype: string
- name: fwr2_aa_light
dtype: string
- name: cdr2_light
dtype: string
- name: cdr2_aa_light
dtype: string
- name: fwr3_light
dtype: string
- name: fwr3_aa_light
dtype: string
- name: fwr4_light
dtype: string
- name: fwr4_aa_light
dtype: string
- name: cdr3_light
dtype: string
- name: cdr3_aa_light
dtype: string
- name: junction_light
dtype: string
- name: junction_length_light
dtype: string
- name: junction_aa_light
dtype: string
- name: junction_aa_length_light
dtype: string
- name: v_score_light
dtype: string
- name: d_score_light
dtype: string
- name: j_score_light
dtype: string
- name: v_cigar_light
dtype: string
- name: d_cigar_light
dtype: string
- name: j_cigar_light
dtype: string
- name: v_support_light
dtype: string
- name: d_support_light
dtype: string
- name: j_support_light
dtype: string
- name: v_identity_light
dtype: string
- name: d_identity_light
dtype: string
- name: j_identity_light
dtype: string
- name: v_sequence_start_light
dtype: string
- name: v_sequence_end_light
dtype: string
- name: v_germline_start_light
dtype: string
- name: v_germline_end_light
dtype: string
- name: d_sequence_start_light
dtype: string
- name: d_sequence_end_light
dtype: string
- name: d_germline_start_light
dtype: string
- name: d_germline_end_light
dtype: string
- name: j_sequence_start_light
dtype: string
- name: j_sequence_end_light
dtype: string
- name: j_germline_start_light
dtype: string
- name: j_germline_end_light
dtype: string
- name: fwr1_start_light
dtype: string
- name: fwr1_end_light
dtype: string
- name: cdr1_start_light
dtype: string
- name: cdr1_end_light
dtype: string
- name: fwr2_start_light
dtype: string
- name: fwr2_end_light
dtype: string
- name: cdr2_start_light
dtype: string
- name: cdr2_end_light
dtype: string
- name: fwr3_start_light
dtype: string
- name: fwr3_end_light
dtype: string
- name: fwr4_start_light
dtype: string
- name: fwr4_end_light
dtype: string
- name: cdr3_start_light
dtype: string
- name: cdr3_end_light
dtype: string
- name: np1_light
dtype: string
- name: np1_length_light
dtype: string
- name: np2_light
dtype: string
- name: np2_length_light
dtype: string
- name: c_region_light
dtype: string
- name: Isotype_light
dtype: string
- name: Redundancy_light
dtype: string
- name: ANARCI_numbering_light
dtype: string
- name: ANARCI_status_light
dtype: string
data_files: paired/*.csv
- config_name: paired
features:
# Metadata fields
- name: meta_Run
dtype: string
- name: meta_Link
dtype: string
- name: meta_Author
dtype: string
- name: meta_Species
dtype: string
- name: meta_Age
dtype: string
- name: meta_BSource
dtype: string
- name: meta_BType
dtype: string
- name: meta_Vaccine
dtype: string
- name: meta_Disease
dtype: string
- name: meta_Subject
dtype: string
- name: meta_Longitudinal
dtype: string
- name: meta_Unique sequences
dtype: int64
- name: meta_Isotype
dtype: string
- name: meta_Chain
dtype: string
- name: source_file
dtype: string
# Heavy chain fields
- name: sequence_id_heavy
dtype: string
- name: sequence_heavy
dtype: string
- name: locus_heavy
dtype: string
- name: stop_codon_heavy
dtype: string
- name: vj_in_frame_heavy
dtype: string
- name: v_frameshift_heavy
dtype: string
- name: productive_heavy
dtype: string
- name: rev_comp_heavy
dtype: string
- name: complete_vdj_heavy
dtype: string
- name: v_call_heavy
dtype: string
- name: d_call_heavy
dtype: string
- name: j_call_heavy
dtype: string
- name: sequence_alignment_heavy
dtype: string
- name: germline_alignment_heavy
dtype: string
- name: sequence_alignment_aa_heavy
dtype: string
- name: germline_alignment_aa_heavy
dtype: string
- name: v_alignment_start_heavy
dtype: string
- name: v_alignment_end_heavy
dtype: string
- name: d_alignment_start_heavy
dtype: string
- name: d_alignment_end_heavy
dtype: string
- name: j_alignment_start_heavy
dtype: string
- name: j_alignment_end_heavy
dtype: string
- name: v_sequence_alignment_heavy
dtype: string
- name: v_sequence_alignment_aa_heavy
dtype: string
- name: v_germline_alignment_heavy
dtype: string
- name: v_germline_alignment_aa_heavy
dtype: string
- name: d_sequence_alignment_heavy
dtype: string
- name: d_sequence_alignment_aa_heavy
dtype: string
- name: d_germline_alignment_heavy
dtype: string
- name: d_germline_alignment_aa_heavy
dtype: string
- name: j_sequence_alignment_heavy
dtype: string
- name: j_sequence_alignment_aa_heavy
dtype: string
- name: j_germline_alignment_heavy
dtype: string
- name: j_germline_alignment_aa_heavy
dtype: string
- name: fwr1_heavy
dtype: string
- name: fwr1_aa_heavy
dtype: string
- name: cdr1_heavy
dtype: string
- name: cdr1_aa_heavy
dtype: string
- name: fwr2_heavy
dtype: string
- name: fwr2_aa_heavy
dtype: string
- name: cdr2_heavy
dtype: string
- name: cdr2_aa_heavy
dtype: string
- name: fwr3_heavy
dtype: string
- name: fwr3_aa_heavy
dtype: string
- name: fwr4_heavy
dtype: string
- name: fwr4_aa_heavy
dtype: string
- name: cdr3_heavy
dtype: string
- name: cdr3_aa_heavy
dtype: string
- name: junction_heavy
dtype: string
- name: junction_length_heavy
dtype: string
- name: junction_aa_heavy
dtype: string
- name: junction_aa_length_heavy
dtype: string
- name: v_score_heavy
dtype: string
- name: d_score_heavy
dtype: string
- name: j_score_heavy
dtype: string
- name: v_cigar_heavy
dtype: string
- name: d_cigar_heavy
dtype: string
- name: j_cigar_heavy
dtype: string
- name: v_support_heavy
dtype: string
- name: d_support_heavy
dtype: string
- name: j_support_heavy
dtype: string
- name: v_identity_heavy
dtype: string
- name: d_identity_heavy
dtype: string
- name: j_identity_heavy
dtype: string
- name: v_sequence_start_heavy
dtype: string
- name: v_sequence_end_heavy
dtype: string
- name: v_germline_start_heavy
dtype: string
- name: v_germline_end_heavy
dtype: string
- name: d_sequence_start_heavy
dtype: string
- name: d_sequence_end_heavy
dtype: string
- name: d_germline_start_heavy
dtype: string
- name: d_germline_end_heavy
dtype: string
- name: j_sequence_start_heavy
dtype: string
- name: j_sequence_end_heavy
dtype: string
- name: j_germline_start_heavy
dtype: string
- name: j_germline_end_heavy
dtype: string
- name: fwr1_start_heavy
dtype: string
- name: fwr1_end_heavy
dtype: string
- name: cdr1_start_heavy
dtype: string
- name: cdr1_end_heavy
dtype: string
- name: fwr2_start_heavy
dtype: string
- name: fwr2_end_heavy
dtype: string
- name: cdr2_start_heavy
dtype: string
- name: cdr2_end_heavy
dtype: string
- name: fwr3_start_heavy
dtype: string
- name: fwr3_end_heavy
dtype: string
- name: fwr4_start_heavy
dtype: string
- name: fwr4_end_heavy
dtype: string
- name: cdr3_start_heavy
dtype: string
- name: cdr3_end_heavy
dtype: string
- name: np1_heavy
dtype: string
- name: np1_length_heavy
dtype: string
- name: np2_heavy
dtype: string
- name: np2_length_heavy
dtype: string
- name: c_region_heavy
dtype: string
- name: Isotype_heavy
dtype: string
- name: Redundancy_heavy
dtype: string
- name: ANARCI_numbering_heavy
dtype: string
- name: ANARCI_status_heavy
dtype: string
# Light chain fields
- name: sequence_id_light
dtype: string
- name: sequence_light
dtype: string
- name: locus_light
dtype: string
- name: stop_codon_light
dtype: string
- name: vj_in_frame_light
dtype: string
- name: v_frameshift_light
dtype: string
- name: productive_light
dtype: string
- name: rev_comp_light
dtype: string
- name: complete_vdj_light
dtype: string
- name: v_call_light
dtype: string
- name: d_call_light
dtype: string
- name: j_call_light
dtype: string
- name: sequence_alignment_light
dtype: string
- name: germline_alignment_light
dtype: string
- name: sequence_alignment_aa_light
dtype: string
- name: germline_alignment_aa_light
dtype: string
- name: v_alignment_start_light
dtype: string
- name: v_alignment_end_light
dtype: string
- name: d_alignment_start_light
dtype: string
- name: d_alignment_end_light
dtype: string
- name: j_alignment_start_light
dtype: string
- name: j_alignment_end_light
dtype: string
- name: v_sequence_alignment_light
dtype: string
- name: v_sequence_alignment_aa_light
dtype: string
- name: v_germline_alignment_light
dtype: string
- name: v_germline_alignment_aa_light
dtype: string
- name: d_sequence_alignment_light
dtype: string
- name: d_sequence_alignment_aa_light
dtype: string
- name: d_germline_alignment_light
dtype: string
- name: d_germline_alignment_aa_light
dtype: string
- name: j_sequence_alignment_light
dtype: string
- name: j_sequence_alignment_aa_light
dtype: string
- name: j_germline_alignment_light
dtype: string
- name: j_germline_alignment_aa_light
dtype: string
- name: fwr1_light
dtype: string
- name: fwr1_aa_light
dtype: string
- name: cdr1_light
dtype: string
- name: cdr1_aa_light
dtype: string
- name: fwr2_light
dtype: string
- name: fwr2_aa_light
dtype: string
- name: cdr2_light
dtype: string
- name: cdr2_aa_light
dtype: string
- name: fwr3_light
dtype: string
- name: fwr3_aa_light
dtype: string
- name: fwr4_light
dtype: string
- name: fwr4_aa_light
dtype: string
- name: cdr3_light
dtype: string
- name: cdr3_aa_light
dtype: string
- name: junction_light
dtype: string
- name: junction_length_light
dtype: string
- name: junction_aa_light
dtype: string
- name: junction_aa_length_light
dtype: string
- name: v_score_light
dtype: string
- name: d_score_light
dtype: string
- name: j_score_light
dtype: string
- name: v_cigar_light
dtype: string
- name: d_cigar_light
dtype: string
- name: j_cigar_light
dtype: string
- name: v_support_light
dtype: string
- name: d_support_light
dtype: string
- name: j_support_light
dtype: string
- name: v_identity_light
dtype: string
- name: d_identity_light
dtype: string
- name: j_identity_light
dtype: string
- name: v_sequence_start_light
dtype: string
- name: v_sequence_end_light
dtype: string
- name: v_germline_start_light
dtype: string
- name: v_germline_end_light
dtype: string
- name: d_sequence_start_light
dtype: string
- name: d_sequence_end_light
dtype: string
- name: d_germline_start_light
dtype: string
- name: d_germline_end_light
dtype: string
- name: j_sequence_start_light
dtype: string
- name: j_sequence_end_light
dtype: string
- name: j_germline_start_light
dtype: string
- name: j_germline_end_light
dtype: string
- name: fwr1_start_light
dtype: string
- name: fwr1_end_light
dtype: string
- name: cdr1_start_light
dtype: string
- name: cdr1_end_light
dtype: string
- name: fwr2_start_light
dtype: string
- name: fwr2_end_light
dtype: string
- name: cdr2_start_light
dtype: string
- name: cdr2_end_light
dtype: string
- name: fwr3_start_light
dtype: string
- name: fwr3_end_light
dtype: string
- name: fwr4_start_light
dtype: string
- name: fwr4_end_light
dtype: string
- name: cdr3_start_light
dtype: string
- name: cdr3_end_light
dtype: string
- name: np1_light
dtype: string
- name: np1_length_light
dtype: string
- name: np2_light
dtype: string
- name: np2_length_light
dtype: string
- name: c_region_light
dtype: string
- name: Isotype_light
dtype: string
- name: Redundancy_light
dtype: string
- name: ANARCI_numbering_light
dtype: string
- name: ANARCI_status_light
dtype: string
data_files: paired/*.csv
---
# OPIG Observed Antibody Dataset (OAS)
## Filtering
If you know you only want a subset of this dataset, you can load a filtered subset like this:
`ds = load_dataset('OPIG/OAS', streaming=streaming, filters=[("meta_Species", "==", "human")]`. |